Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006120

Physical Location & Seq

Genomic Coordinates Reverse (-)

62610722 .. 62615343

Gene Structure 4622 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0496200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGAAATCCCTGAAGAGAACTACTGGTCCAGTGATGTCGACACAGTTTCCAGTGTTCGCTGTCCTTATTATCATCCTACAGCTCTTCATCTCTCTGGCTCGAGCCGAAGTGCATTACTACGATTTTATAGTTAAGGAGGTAAACTTCACAAGACTGTGTGAGTCAAAGCTCATGTTAGTAGTAAACGAGAGTTTTCCGGGTCCAGAATTACGAGCTCGCAAAGGAGATACAATTTATATTAATGTTTACAATCAAGGATTTTATGGTTTCACCATTCACTGGCATGGAGTAAAGCAACCAAGAAATCCATGGTTTGATGGCCCGGAATATGTGACACAATGCCCAATTTCACCGGGAACAAATTTTACCTATCAAGTTCAATTGACCACAGAAGAAGGAACTGTATGGTGGCATGCTCATAGTGACTGGACGAGAGCTAGCGTTCACGGTACCATTGTCGTCTTGCCTGCTCTTGGAACAACATTTCCATTTCCTGAGCCCGATGAAGAGGAGAGCATTGTGTTTGGATCTTGGTATTTGGGAAATTTGAAACAAACGATTGACGAGTGTATGGTGCCAGAAAATGCTACCAACTTACCCGAAGCAGATGCTTACACAATAAATGGCCAACCTGGGGATTTTGCTCTATGCTCCAAGAATTCAACATATCGTCTTAAGGTGGACTATGGCAAGACGTATCTTCTTCGGATACTGAACGCCAACATTGATGCAGAGATGTACTTTGCAATTGCTGAGCACAATCTCACTATGGTTGGCATGGACGGTTCCTATACCAAACCCATCAACACAAGCTACATAATGATAAGCCCTGGACAAACAATGGATGTGTTGCTCAACACAAATTCGACTCTGGGGAGCTATTACATGATCGCAAGAGAATACGTGAGTGCTACAGTTAACTCAGTATCTAGCTATCTGGATGATGCTGTTGCAATCCTTGAATATAATGGCAACTATACCACTTCGGAAGCTCCGATATATCCTGAAAACCTTCCCATGTCCTTATCCCAAGAACCAGCATACGACTTCCTCAGGAAAATTAGAAGCTTAGCCACCCCAGAATATCCTATAAATGTCCCAAAAGAGAGTGACGTTACTAAGAGAATGTATATAACAGCTTCCTCCAACGCTCTTTACTGCACTCCAGATTTAGGTCCCACATGCGTCAACATATCTTGGGCTGCAAGCGTCAATAATATTAGTTGGGTTAATCCATCAGAATCTATCTTGCAAGCCTACTACAACAACATAAGCGAACCAGTTTATGAAACAGACTTCCCAGATGAGCCGCCTGTTTATTTTAACTTCACTGATGATTCATCAGCAATAGATGTAGGCTTAACAGTCCAAGGGACAAAGGTGACGATGCTGGAATACAATGAAACAGTTGAGATGGTGTTTCAAGGAACTGATGTGGAGGGAGCGGCCGTGAATCATCCAATGCACGTGCATGGGCTTAGCTTTTATGTGCTTGGTTTTGGTTTTGGGAATTACTTCGCCGAGAGGGACTCAAAAACCTTCAATTTGATTGATCCTCCTTATGTAGCAACGTTCATAACTCCAAAAAATGGATGGGTAGCTCTCAGATTCGTAGCGAATAATCCAGGTGTATGGTTTTGGCATTGTCATATGGAGAGACACTTGACATGGGGTATGGAGTCTGCTTTTATAGTGAAGAACGGGGGCACACCTGAGACTACTATGCTCCCTCCTCCGGCTACAATGCCTTCCTGTGACGTTCCATTGAAGTCTTCAGCCATCCTAGAGAAGCAACTAGAACGGACTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001101 GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006979 GO:0007584 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031667 GO:0042221 GO:0042493 GO:0043207 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0080013 GO:0080027 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00904 map00904

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

603

Amino Acids

67.76

Weight (kDa)

4.83

Isoelectric Point (pI)

42.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	44 - 156	9.8e-38	Multicopper oxidase
Cu-oxidase	PF00394	172 - 325	3.3e-32	Multicopper oxidase
Cu-oxidase_2	PF07731	433 - 567	4.9e-35	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61120
malus_domestica	MD17G1080300.v1.1 MD17G1080400.v1.1 MD17G1080500.v1.1 MD17G1080700.v1.1 MD17G1080800.v1.1
prunus_persica	Prupe.3G234300_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0162311
rosa_laevigata	RLG00000021334 RLG00000021337
rosa_multiflora	Rmu_co8462281.1_g000001 Rmu_sc0004020.1_g000013
rosa_roxburghii	Rroxscaffold_2G00088040 Rroxscaffold_2G00088060 Rroxscaffold_2G00088110
rosa_rugosa	Rorug02G0496200 Rorug02G0496300
rosa_samantha	Rh2AG562300 Rh2AG562400 Rh2BG575400 Rh2CG545800 Rh2DG585200 Rh2DG585600
rosa_wichuraiana	Rw2G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	449
AccB1I	GGYRCC	2 cut(s)	449, 574
AccB7I	CCANNNNNTGG	2 cut(s)	279, 1589
AccBSI	CCGCTC	1 cut(s)	1445
AccI	GTMKAC	1 cut(s)	38
AciI	CCGC	2 cut(s)	1310, 1445
AclI	AACGTT	1 cut(s)	1571
AclWI	GGATC	2 cut(s)	535, 1547
AcoI	YGGCCR	2 cut(s)	625, 1446
AcsI	RAATTY	4 cut(s)	361, 544, 658, 862
AcuI	CTGAAG	2 cut(s)	32, 1758
AcvI	CACGTG	1 cut(s)	1468
AfaI	GTAC	2 cut(s)	451, 740
AfiI	CCNNNNNNNGG	6 cut(s)	279, 473, 634, 1172, 1589, 1735
AflII	CTTAAG	1 cut(s)	674
AgsI	TTSAA	7 cut(s)	380, 550, 663, 962, 1424, 1543, 1768
AjnI	CCWGG	3 cut(s)	631, 829, 1624
AloI	GAACNNNNNNTCC	4 cut(s)	10, 42, 469, 501
Alw21I	GWGCWC	2 cut(s)	217, 759
Alw26I	GTCTC	2 cut(s)	1651, 1709
AlwI	GGATC	2 cut(s)	535, 1547
Ama87I	CYCGRG	1 cut(s)	99
AoxI	GGCC	3 cut(s)	319, 625, 1446
ApeKI	GCWGC	1 cut(s)	1202
ApoI	RAATTY	4 cut(s)	361, 544, 658, 862
AseI	ATTAAT	1 cut(s)	240
Asp700I	GAANNNNTTC	2 cut(s)	1011, 1514
Asp718I	GGTACC	1 cut(s)	449
AspS9I	GGNCC	4 cut(s)	26, 200, 320, 1175
AsuC2I	CCSGG	3 cut(s)	198, 323, 354
AsuHPI	GGTGA	3 cut(s)	262, 342, 1393
AsuNHI	GCTAGC	1 cut(s)	437
AvaI	CYCGRG	1 cut(s)	99
AvaII	GGWCC	3 cut(s)	26, 200, 1175
AxyI	CCTNAGG	1 cut(s)	1052
BaeGI	GKGCMC	1 cut(s)	1709
BaeI	ACNNNNGTAYC	2 cut(s)	441, 474
BalI	TGGCCA	1 cut(s)	627
BanI	GGYRCC	2 cut(s)	449, 574
BanII	GRGCYC	2 cut(s)	217, 501
BbrPI	CACGTG	1 cut(s)	1468
BbsI	GAAGAC	1 cut(s)	1764
Bbv12I	GWGCWC	2 cut(s)	217, 759
BbvI	GCAGC	1 cut(s)	1189
BccI	CCATC	6 cut(s)	311, 809, 1243, 1408, 1587, 1787
BceAI	ACGGC	1 cut(s)	1433
BcgI	CGANNNNNNTGC	2 cut(s)	590, 624
BciT130I	CCWGG	3 cut(s)	633, 831, 1626
BciVI	GTATCC	1 cut(s)	702
BcnI	CCSGG	3 cut(s)	198, 323, 354
BcoDI	GTCTC	2 cut(s)	1651, 1709
BfaI	CTAG	4 cut(s)	438, 930, 1784, 1796
BfmI	CTRYAG	2 cut(s)	77, 912
BfrI	CTTAAG	1 cut(s)	674
BfuI	GTATCC	1 cut(s)	702
BisI	GCNGC	3 cut(s)	1203, 1310, 1446
BlpI	GCTNAGC	3 cut(s)	753, 1069, 1478
BlsI	GCNGC	3 cut(s)	1204, 1311, 1447
Bme1390I	CCNGG	6 cut(s)	198, 323, 354, 633, 831, 1626
Bme18I	GGWCC	3 cut(s)	26, 200, 1175
BmeT110I	CYCGRG	1 cut(s)	99
BmgT120I	GGNCC	4 cut(s)	26, 200, 320, 1175
BmiI	GGNNCC	5 cut(s)	201, 451, 576, 787, 1177
BmrFI	CCNGG	6 cut(s)	198, 323, 354, 633, 831, 1626
BmsI	GCATC	4 cut(s)	598, 718, 934, 1377
BmtI	GCTAGC	1 cut(s)	441
BpiI	GAAGAC	1 cut(s)	1764
BplI	GAGNNNNNCTC	2 cut(s)	1514, 1546
BpmI	CTGGAG	1 cut(s)	1149
Bpu10I	CCTNAGC	1 cut(s)	495
Bpu1102I	GCTNAGC	3 cut(s)	753, 1069, 1478
BpuMI	CCSGG	3 cut(s)	198, 323, 354
BsaAI	YACGTR	2 cut(s)	904, 1468
BsaJI	CCNNGG	4 cut(s)	308, 632, 829, 1369
BsaXI	ACNNNNNCTCC	2 cut(s)	1434, 1464
Bsc4I	CCNNNNNNNGG	6 cut(s)	279, 473, 634, 1172, 1589, 1735
Bse1I	ACTGG	6 cut(s)	28, 29, 50, 284, 431, 1280
Bse21I	CCTNAGG	1 cut(s)	1052
BseBI	CCWGG	3 cut(s)	633, 831, 1626
BseDI	CCNNGG	4 cut(s)	308, 632, 829, 1369
BseGI	GGATG	6 cut(s)	72, 850, 946, 1456, 1598, 1779
BseLI	CCNNNNNNNGG	6 cut(s)	279, 473, 634, 1172, 1589, 1735
BseMII	CTCAG	6 cut(s)	486, 744, 936, 1066, 1618, 1704
BseNI	ACTGG	6 cut(s)	28, 29, 50, 284, 431, 1280
BseRI	GAGGAG	2 cut(s)	524, 1722
BseSI	GKGCMC	1 cut(s)	1709
BseX3I	CGGCCG	1 cut(s)	1446
BseXI	GCAGC	1 cut(s)	1189
BsgI	GTGCAG	1 cut(s)	1144
Bsh1285I	CGRYCG	1 cut(s)	1449
BshFI	GGCC	3 cut(s)	321, 627, 1448
BshNI	GGYRCC	2 cut(s)	449, 574
BsiEI	CGRYCG	1 cut(s)	1449
BsiHKAI	GWGCWC	2 cut(s)	217, 759
BsiHKCI	CYCGRG	1 cut(s)	99
BsiSI	CCGG	4 cut(s)	197, 323, 353, 1736
BslFI	GGGAC	4 cut(s)	1082, 1161, 1387, 1541
BslI	CCNNNNNNNGG	6 cut(s)	279, 473, 634, 1172, 1589, 1735
BsmAI	GTCTC	2 cut(s)	1651, 1709
BsmFI	GGGAC	4 cut(s)	1082, 1161, 1387, 1541
BsnI	GGCC	3 cut(s)	321, 627, 1448
BsoBI	CYCGRG	1 cut(s)	99
Bsp1286I	GDGCHC	4 cut(s)	217, 501, 759, 1709
Bsp143I	GATC	3 cut(s)	527, 888, 1552
Bsp1720I	GCTNAGC	3 cut(s)	753, 1069, 1478
Bsp19I	CCATGG	1 cut(s)	308
BspACI	CCGC	2 cut(s)	1310, 1445
BspANI	GGCC	3 cut(s)	321, 627, 1448
BspCNI	CTCAG	6 cut(s)	487, 745, 935, 1065, 1617, 1705
BspLI	GGNNCC	5 cut(s)	201, 451, 576, 787, 1177
BspOI	GCTAGC	1 cut(s)	441
BspPI	GGATC	2 cut(s)	535, 1547
BspQI	GCTCTTC	1 cut(s)	89
BspT107I	GGYRCC	2 cut(s)	449, 574
BspTI	CTTAAG	1 cut(s)	674
BsrBI	CCGCTC	1 cut(s)	1445
BsrI	ACTGG	6 cut(s)	28, 29, 50, 284, 431, 1280
BssECI	CCNNGG	4 cut(s)	308, 632, 829, 1369
BssMI	GATC	3 cut(s)	527, 888, 1552
BssT1I	CCWWGG	2 cut(s)	308, 1369
Bst2UI	CCWGG	3 cut(s)	633, 831, 1626
Bst4CI	ACNGT	8 cut(s)	45, 156, 403, 449, 785, 916, 1366, 1408
Bst6I	CTCTTC	3 cut(s)	8, 89, 501
BstAFI	CTTAAG	1 cut(s)	674
BstBAI	YACGTR	2 cut(s)	904, 1468
BstC8I	GCNNGC	6 cut(s)	217, 414, 439, 468, 1207, 1254
BstDEI	CTNAG	9 cut(s)	495, 753, 922, 1052, 1069, 1119, 1478, 1604, 1713
BstDSI	CCRYGG	1 cut(s)	308
BstF5I	GGATG	6 cut(s)	72, 850, 946, 1456, 1598, 1779
BstKTI	GATC	3 cut(s)	530, 891, 1555
BstMAI	GTCTC	2 cut(s)	1651, 1709
BstMBI	GATC	3 cut(s)	527, 888, 1552
BstMCI	CGRYCG	1 cut(s)	1449
BstNI	CCWGG	3 cut(s)	633, 831, 1626
BstNSI	RCATGY	2 cut(s)	416, 1185
BstSCI	CCNGG	6 cut(s)	196, 321, 352, 631, 829, 1624
BstSFI	CTRYAG	2 cut(s)	77, 912
BstSLI	GKGCMC	1 cut(s)	1709
BstV1I	GCAGC	1 cut(s)	1189
BstV2I	GAAGAC	1 cut(s)	1764
BstX2I	RGATCY	1 cut(s)	527
BstXI	CCANNNNNNTGG	1 cut(s)	1632
BstYI	RGATCY	1 cut(s)	527
BstZI	CGGCCG	1 cut(s)	1446
Bsu36I	CCTNAGG	1 cut(s)	1052
BsuI	GTATCC	1 cut(s)	702
BsuRI	GGCC	3 cut(s)	321, 627, 1448
BtgI	CCRYGG	1 cut(s)	308
BtsCI	GGATG	6 cut(s)	72, 850, 946, 1456, 1598, 1779
BtsIMutI	CAGTG	4 cut(s)	36, 57, 277, 1329
Cac8I	GCNNGC	6 cut(s)	217, 414, 439, 468, 1207, 1254
Cfr13I	GGNCC	4 cut(s)	26, 200, 320, 1175
CseI	GACGC	2 cut(s)	1174, 1198
Csp6I	GTAC	2 cut(s)	450, 739
CviQI	GTAC	2 cut(s)	450, 739
DdeI	CTNAG	9 cut(s)	495, 753, 922, 1052, 1069, 1119, 1478, 1604, 1713
DpnI	GATC	3 cut(s)	529, 890, 1554
DpnII	GATC	3 cut(s)	527, 888, 1552
EaeI	YGGCCR	2 cut(s)	625, 1446
EagI	CGGCCG	1 cut(s)	1446
Eam1104I	CTCTTC	3 cut(s)	8, 89, 501
EarI	CTCTTC	3 cut(s)	8, 89, 501
Ecl136II	GAGCTC	1 cut(s)	215
EclXI	CGGCCG	1 cut(s)	1446
Eco130I	CCWWGG	2 cut(s)	308, 1369
Eco24I	GRGCYC	2 cut(s)	217, 501
Eco47I	GGWCC	3 cut(s)	26, 200, 1175
Eco52I	CGGCCG	1 cut(s)	1446
Eco53kI	GAGCTC	1 cut(s)	215
Eco57I	CTGAAG	2 cut(s)	32, 1758
Eco72I	CACGTG	1 cut(s)	1468
Eco81I	CCTNAGG	1 cut(s)	1052
Eco88I	CYCGRG	1 cut(s)	99
EcoICRI	GAGCTC	1 cut(s)	215
EcoO109I	RGGNCCY	1 cut(s)	1175
EcoRI	GAATTC	1 cut(s)	658
EcoRII	CCWGG	3 cut(s)	631, 829, 1624
EcoT14I	CCWWGG	2 cut(s)	308, 1369
EcoT38I	GRGCYC	2 cut(s)	217, 501
ErhI	CCWWGG	2 cut(s)	308, 1369
FaqI	GGGAC	4 cut(s)	1082, 1161, 1387, 1541
FauNDI	CATATG	1 cut(s)	1650
FblI	GTMKAC	1 cut(s)	38
Fnu4HI	GCNGC	3 cut(s)	1203, 1310, 1446
FokI	GGATG	6 cut(s)	59, 857, 953, 1443, 1605, 1766
FriOI	GRGCYC	2 cut(s)	217, 501
Fsp4HI	GCNGC	3 cut(s)	1203, 1310, 1446
FspBI	CTAG	4 cut(s)	438, 930, 1784, 1796
GluI	GCNGC	3 cut(s)	1203, 1310, 1446
GsuI	CTGGAG	1 cut(s)	1149
HaeIII	GGCC	3 cut(s)	321, 627, 1448
HapII	CCGG	4 cut(s)	197, 323, 353, 1736
HgaI	GACGC	2 cut(s)	1174, 1198
HincII	GTYRAC	3 cut(s)	39, 919, 1189
HindII	GTYRAC	3 cut(s)	39, 919, 1189
HindIII	AAGCTT	1 cut(s)	1066
HinfI	GANTC	8 cut(s)	161, 868, 1241, 1337, 1453, 1529, 1608, 1679
HpaI	GTTAAC	1 cut(s)	919
HpaII	CCGG	4 cut(s)	197, 323, 353, 1736
HphI	GGTGA	3 cut(s)	262, 342, 1393
Hpy166II	GTNNAC	8 cut(s)	39, 142, 184, 247, 445, 682, 919, 1189
Hpy188I	TCNGA	5 cut(s)	708, 988, 996, 1240, 1607
Hpy188III	TCNNGA	6 cut(s)	203, 494, 938, 1004, 1054, 1166
Hpy8I	GTNNAC	8 cut(s)	39, 142, 184, 247, 445, 682, 919, 1189
HpyAV	CCTTC	4 cut(s)	389, 1022, 1549, 1758
HpyCH4III	ACNGT	8 cut(s)	45, 156, 403, 449, 785, 916, 1366, 1408
HpyCH4IV	ACGT	6 cut(s)	695, 903, 1113, 1467, 1571, 1758
HpyCH4V	TGCA	9 cut(s)	112, 731, 746, 953, 1161, 1205, 1252, 1465, 1471
HpyF3I	CTNAG	9 cut(s)	495, 753, 922, 1052, 1069, 1119, 1478, 1604, 1713
HpySE526I	ACGT	6 cut(s)	695, 903, 1113, 1467, 1571, 1758
KpnI	GGTACC	1 cut(s)	453
KspAI	GTTAAC	1 cut(s)	919
Kzo9I	GATC	3 cut(s)	527, 888, 1552
LguI	GCTCTTC	1 cut(s)	89
LmnI	GCTCC	5 cut(s)	656, 876, 997, 1442, 1731
Lsp1109I	GCAGC	1 cut(s)	1189
LweI	GCATC	4 cut(s)	598, 718, 934, 1377
MaeI	CTAG	4 cut(s)	438, 930, 1784, 1796
MaeII	ACGT	6 cut(s)	695, 903, 1113, 1467, 1571, 1758
MaeIII	GTNAC	6 cut(s)	331, 422, 1109, 1114, 1381, 1754
MalI	GATC	3 cut(s)	529, 890, 1554
MbiI	CCGCTC	1 cut(s)	1445
MboI	GATC	3 cut(s)	527, 888, 1552
MboII	GAAGA	8 cut(s)	25, 76, 404, 518, 692, 695, 1708, 1764
MfeI	CAATTG	2 cut(s)	380, 747
MflI	RGATCY	1 cut(s)	527
MhlI	GDGCHC	4 cut(s)	217, 501, 759, 1709
MlsI	TGGCCA	1 cut(s)	627
MluNI	TGGCCA	1 cut(s)	627
MlyI	GAGTC	4 cut(s)	170, 862, 1523, 1688
MmeI	TCCRAC	1 cut(s)	1170
MnlI	CCTC	9 cut(s)	130, 502, 1061, 1153, 1432, 1518, 1566, 1740, 1743
Mox20I	TGGCCA	1 cut(s)	627
MroXI	GAANNNNTTC	2 cut(s)	1011, 1514
MscI	TGGCCA	1 cut(s)	627
MseI	TTAA	8 cut(s)	132, 240, 675, 918, 1230, 1323, 1361, 1810
MslI	CAYNNNNRTG	2 cut(s)	282, 1470
Msp20I	TGGCCA	1 cut(s)	627
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	4 cut(s)	197, 323, 353, 1736
MspR9I	CCNGG	6 cut(s)	198, 323, 354, 633, 831, 1626
MunI	CAATTG	2 cut(s)	380, 747
MvaI	CCWGG	3 cut(s)	633, 831, 1626
NciI	CCSGG	3 cut(s)	198, 323, 354
NcoI	CCATGG	1 cut(s)	308
NdeI	CATATG	1 cut(s)	1650
NdeII	GATC	3 cut(s)	527, 888, 1552
NheI	GCTAGC	1 cut(s)	437
NlaIV	GGNNCC	5 cut(s)	201, 451, 576, 787, 1177
NmeAIII	GCCGAG	1 cut(s)	1546
NmuCI	GTSAC	5 cut(s)	331, 422, 1109, 1381, 1754
NspI	RCATGY	2 cut(s)	416, 1185
PaeI	GCATGC	1 cut(s)	416
PaeR7I	CTCGAG	1 cut(s)	99
PciSI	GCTCTTC	1 cut(s)	89
PcsI	WCGNNNNNNNCGW	1 cut(s)	992
PdmI	GAANNNNTTC	2 cut(s)	1011, 1514
PfeI	GAWTC	4 cut(s)	1241, 1337, 1453, 1608
PflMI	CCANNNNNTGG	2 cut(s)	279, 1589
PkrI	GCNGC	3 cut(s)	1204, 1311, 1447
PleI	GAGTC	4 cut(s)	169, 862, 1523, 1687
PmaCI	CACGTG	1 cut(s)	1468
PmlI	CACGTG	1 cut(s)	1468
PpsI	GAGTC	4 cut(s)	169, 862, 1523, 1687
Ppu21I	YACGTR	2 cut(s)	904, 1468
PpuMI	RGGWCCY	1 cut(s)	1175
PshBI	ATTAAT	1 cut(s)	240
Psp124BI	GAGCTC	1 cut(s)	217
Psp1406I	AACGTT	1 cut(s)	1571
Psp5II	RGGWCCY	1 cut(s)	1175
Psp6I	CCWGG	3 cut(s)	631, 829, 1624
PspCI	CACGTG	1 cut(s)	1468
PspGI	CCWGG	3 cut(s)	631, 829, 1624
PspN4I	GGNNCC	5 cut(s)	201, 451, 576, 787, 1177
PspPI	GGNCC	4 cut(s)	26, 200, 320, 1175
PspPPI	RGGWCCY	1 cut(s)	1175
PspXI	VCTCGAGB	1 cut(s)	99
PsrI	GAACNNNNNNTAC	2 cut(s)	349, 381
PsuI	RGATCY	1 cut(s)	527
RsaI	GTAC	2 cut(s)	451, 740
RsaNI	GTAC	2 cut(s)	450, 739
RseI	CAYNNNNRTG	2 cut(s)	282, 1470
SacI	GAGCTC	1 cut(s)	217
SalI	GTCGAC	1 cut(s)	37
SapI	GCTCTTC	1 cut(s)	89
SaqAI	TTAA	8 cut(s)	132, 240, 675, 918, 1230, 1323, 1361, 1810
SatI	GCNGC	3 cut(s)	1203, 1310, 1446
Sau3AI	GATC	3 cut(s)	527, 888, 1552
Sau96I	GGNCC	4 cut(s)	26, 200, 320, 1175
SchI	GAGTC	4 cut(s)	170, 862, 1523, 1688
ScrFI	CCNGG	6 cut(s)	198, 323, 354, 633, 831, 1626
SduI	GDGCHC	4 cut(s)	217, 501, 759, 1709
SfaNI	GCATC	4 cut(s)	598, 718, 934, 1377
SfcI	CTRYAG	2 cut(s)	77, 912
Sfr274I	CTCGAG	1 cut(s)	99
SinI	GGWCC	3 cut(s)	26, 200, 1175
SlaI	CTCGAG	1 cut(s)	99
SmiMI	CAYNNNNRTG	2 cut(s)	282, 1470
SmlI	CTYRAG	2 cut(s)	99, 674
SmoI	CTYRAG	2 cut(s)	99, 674
SphI	GCATGC	1 cut(s)	416
SsiI	CCGC	2 cut(s)	1310, 1445
SspI	AATATT	1 cut(s)	1219
SspMI	CTAG	4 cut(s)	438, 930, 1784, 1796
SstI	GAGCTC	1 cut(s)	217
StyD4I	CCNGG	6 cut(s)	196, 321, 352, 631, 829, 1624
StyI	CCWWGG	2 cut(s)	308, 1369
TaaI	ACNGT	8 cut(s)	45, 156, 403, 449, 785, 916, 1366, 1408
TaiI	ACGT	6 cut(s)	698, 906, 1116, 1470, 1574, 1761
TaqI	TCGA	3 cut(s)	38, 100, 866
TatI	WGTACW	1 cut(s)	738
TauI	GCSGC	2 cut(s)	1312, 1448
TfiI	GAWTC	4 cut(s)	1241, 1337, 1453, 1608
Tru1I	TTAA	8 cut(s)	132, 240, 675, 918, 1230, 1323, 1361, 1810
Tru9I	TTAA	8 cut(s)	132, 240, 675, 918, 1230, 1323, 1361, 1810
TscAI	CASTG	4 cut(s)	36, 57, 284, 1336
TseFI	GTSAC	5 cut(s)	331, 422, 1109, 1381, 1754
TseI	GCWGC	1 cut(s)	1202
Tsp45I	GTSAC	5 cut(s)	331, 422, 1109, 1381, 1754
TspDTI	ATGAA	7 cut(s)	17, 76, 519, 1302, 1329, 1416, 1564
TspRI	CASTG	4 cut(s)	36, 57, 284, 1336
Van91I	CCANNNNNTGG	2 cut(s)	279, 1589
Vha464I	CTTAAG	1 cut(s)	674
VpaK11BI	GGWCC	3 cut(s)	26, 200, 1175
VspI	ATTAAT	1 cut(s)	240
XapI	RAATTY	4 cut(s)	361, 544, 658, 862
XceI	RCATGY	2 cut(s)	416, 1185
XcmI	CCANNNNNNNNNTGG	2 cut(s)	306, 1590
XhoI	CTCGAG	1 cut(s)	99
XmiI	GTMKAC	1 cut(s)	38
XmnI	GAANNNNTTC	2 cut(s)	1011, 1514
XspI	CTAG	4 cut(s)	438, 930, 1784, 1796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.