Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0006120

Physical Location & Seq

Genomic Coordinates Forward (+)

79177762 .. 79184413

Gene Structure 6652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG562300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGGAATTGCCAGACTACTCATTGGTTAAGAATCTTGTAATGAAGGTTAAAAAGGAGATGTTCTCATCTTCATCTTCATCTTCATCATCAGAACATGATGATGATCATGTAGTGGATGATGTATATCGTCTTTTGTCTCCTTCTGCTTACGACACTGCTTGGCTCGCCATGGTTCCGAATCCTGAAAAACCAGATCGGCCCTTGTTCAGGGGATGCTTGCAATGGGTGCTCCGGAACCAAAAACCAGGAGGCTTCTGGGGATCATCAGAGTCGACCTCTATAAGTACCTTATGCTCCCTCACTTCGACTCTCGCTTGCATTGTTGCACTCACCACCTGGAGTGTTGGCCACACTGCCATTCAAAAGGGGTTGGGGTTCATTCATGCAAATGCAGAAGAGATACTGAAAGAGCAAAATGGCTGCTTTCCCGAGTGGTTTGTACTTCTTTTACCGGCAATAGTTGACCTTGCAAAGACCAAAGGCCTGCATGTTCATTTCTCAAATGGTTCAAAAGCGCTTATACAACAGATTTTCCATGAGAGACAACAACTATTCCAAATCAACAGGTCGGGACAGGAGTACTATGAGACACTGATGCCATATCTTGAAGCTTTGCCGGAGAGTTATAATGAGATTTTGCTACAACAGAGTGAAGATTATGGGATCCTCATCCAGTTTCCATCAGCCACCGCCTATGCTTTTATGAAGACAGGAAATAAGAATCTTTTGGTGAATTTGAATTCTGTTGTCCAAAGATGTGGATATGGAGTTCCTGCGATTTACCCCATCGATGAGGACCTCATGAAGGTTTGTCTTATTGACCGGATTGAGACACTGGGCCTGGCAGAGTATTTCATGGACGAGATAACCACTCTACTTGATCAAGTTTTCAGAAGTTATGTGAACAATGAAGGGACAGAGATGACGGTGAAGCATGGTCTGCTTCCACTAGAACTTTATAGAGATTCACTGGCATTTCGACTACTGAGACTACATCGCTATACTGTATCTCCTTGGAAGTTCTGCTGGTTCCTCCAAGATGAAGATATATTGGCGCACATTGAAGAGCACCATGAAACGTTTTTGAGTGCCATGTATCATGTATACAGGGCATCAGATCTCACTTTTGCCGGAGATAGTCAGCTTGAAGATGCTAGGTTATTCTCTAAAAGAATACTGGAAAAAGAAACAACAAATTCTGAGAAATTGCTGGTAGACCAGATTAAGCATGAACTTAGTCATCCATGGCTTGCTCGGTTGGATCATTTGGAACACAGGAAATGCATTGAGAGGGAAGATGCTATTCATCCATGGACAGGAAAAGCCTTTTCGTATAGACTATCATTTTCGAGTGATGCTATGCTGCAACAACTTGCCATAGAGAATTATTCACTCAGACAATCAATATTCAGAGATGAACTAACCGAGTTACAGATGTGGTCAAAGGACATGGGACTTTGTGACATGGGGTTTGCACGACAGAAAACCGCATACTGTTATTTTGCAGTTGCATCAACTGTATCATCTCCTTCCCTTTCGGATGTGAGACTGGCACTTGTCAAAAGTGCAATCCTTGTTACGGTGGCTGATGATTTTTTTGATGCGGAAGGTTCATTGAGTGATCTCAAAAGTCTTACCAATGCCGTCAAAAGACGGCAGCAGAAAGGCCTGAACGGATACAGCAAAACTATATTTAAAGCTCTCAAGGATCTCCTCGATGACATTTCAATGCAATTCTTCAATAAATATGGATGTGAGTCATGTGACGTAAACTTATACCTACAAGATCTATGGCATCAAACATTTGTGAAATGGTTAAAGGAGGCAGAGTGGAGCAGAACTGGGCATACCCCATCAATAGCTGAGTACCTTCAAGTCGCCACGAGCTCTATAGCTGCACAAACTATTGCTCTTCCAGCAGCTCTTCTGCTTAGTCCACAAGGAATAGAATTCCTCAAGTGCCCTCAAAATGAGCCGCTTACAAATCTACTTATGGTTTCGACACGCCTTTTGAACGATATTGGAACCTACGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001101 GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006979 GO:0007584 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031667 GO:0042221 GO:0042493 GO:0043207 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0080013 GO:0080027 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00904 map00904

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

678

Amino Acids

77.25

Weight (kDa)

5.41

Isoelectric Point (pI)

43.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	227 - 412	7e-31	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	482 - 678	1.3e-43	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	522 - 678	2.9e-23	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61120
malus_domestica	MD17G1080300.v1.1 MD17G1080400.v1.1 MD17G1080500.v1.1 MD17G1080700.v1.1 MD17G1080800.v1.1
prunus_persica	Prupe.3G234300_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0162311
rosa_laevigata	RLG00000021334 RLG00000021337
rosa_multiflora	Rmu_co8462281.1_g000001 Rmu_sc0004020.1_g000013
rosa_roxburghii	Rroxscaffold_2G00088040 Rroxscaffold_2G00088060 Rroxscaffold_2G00088110
rosa_rugosa	Rorug02G0496200 Rorug02G0496300
rosa_samantha	Rh2AG562300 Rh2AG562400 Rh2BG575400 Rh2CG545800 Rh2DG585200 Rh2DG585600
rosa_wichuraiana	Rw2G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	627
AccI	GTMKAC	3 cut(s)	272, 1104, 1215
AccIII	TCCGGA	1 cut(s)	231
AciI	CCGC	4 cut(s)	690, 1488, 1604, 1976
AclI	AACGTT	1 cut(s)	1079
AclWI	GGATC	5 cut(s)	268, 658, 671, 1269, 1716
AcoI	YGGCCR	1 cut(s)	346
AcsI	RAATTY	4 cut(s)	733, 739, 1195, 1949
AfaI	GTAC	4 cut(s)	286, 441, 581, 1868
AfeI	AGCGCT	1 cut(s)	516
AfiI	CCNNNNNNNGG	4 cut(s)	207, 805, 1316, 1579
AjnI	CCWGG	3 cut(s)	244, 335, 840
AloI	GAACNNNNNNTCC	2 cut(s)	753, 785
AluBI	AGCT	7 cut(s)	611, 1144, 1700, 1862, 1887, 1895, 1922
AluI	AGCT	7 cut(s)	611, 1144, 1700, 1862, 1887, 1895, 1922
Alw21I	GWGCWC	3 cut(s)	231, 1071, 1889
Alw26I	GTCTC	6 cut(s)	141, 535, 581, 824, 982, 1540
AlwI	GGATC	5 cut(s)	268, 658, 671, 1269, 1716
Ama87I	CYCGRG	1 cut(s)	428
Aor13HI	TCCGGA	1 cut(s)	231
Aor51HI	AGCGCT	1 cut(s)	516
AoxI	GGCC	5 cut(s)	197, 346, 481, 838, 1666
ApeKI	GCWGC	5 cut(s)	420, 1363, 1657, 1895, 1919
ApoI	RAATTY	4 cut(s)	733, 739, 1195, 1949
ArsI	GACNNNNNNTTYG	4 cut(s)	1454, 1486, 1993, 2025
AspLEI	GCGC	2 cut(s)	517, 1057
AspS9I	GGNCC	3 cut(s)	198, 796, 838
AsuHPI	GGTGA	3 cut(s)	322, 742, 940
AvaI	CYCGRG	1 cut(s)	428
AvaII	GGWCC	1 cut(s)	796
BaeGI	GKGCMC	1 cut(s)	1964
BalI	TGGCCA	1 cut(s)	348
BamHI	GGATCC	1 cut(s)	663
BanII	GRGCYC	1 cut(s)	1889
BauI	CACGAG	1 cut(s)	1882
BbsI	GAAGAC	1 cut(s)	713
Bbv12I	GWGCWC	3 cut(s)	231, 1071, 1889
BbvI	GCAGC	5 cut(s)	407, 1350, 1669, 1882, 1931
BccI	CCATC	3 cut(s)	688, 794, 1861
BceAI	ACGGC	2 cut(s)	1628, 1670
BciT130I	CCWGG	3 cut(s)	246, 337, 842
BciVI	GTATCC	1 cut(s)	1670
BclI	TGATCA	2 cut(s)	103, 880
BcoDI	GTCTC	6 cut(s)	141, 535, 581, 824, 982, 1540
BfaI	CTAG	2 cut(s)	950, 1155
BfmI	CTRYAG	1 cut(s)	1890
BfoI	RGCGCY	1 cut(s)	518
BfuI	GTATCC	1 cut(s)	1670
BglII	AGATCT	2 cut(s)	1117, 1786
BisI	GCNGC	6 cut(s)	421, 1364, 1658, 1896, 1920, 1976
BlsI	GCNGC	6 cut(s)	422, 1365, 1659, 1897, 1921, 1977
BmcAI	AGTACT	1 cut(s)	581
Bme1390I	CCNGG	3 cut(s)	246, 337, 842
Bme18I	GGWCC	1 cut(s)	796
BmeT110I	CYCGRG	1 cut(s)	428
BmgT120I	GGNCC	3 cut(s)	198, 796, 838
BmiI	GGNNCC	5 cut(s)	174, 236, 665, 1031, 2026
BmrFI	CCNGG	3 cut(s)	246, 337, 842
BmrI	ACTGGG	2 cut(s)	845, 1851
BmsI	GCATC	9 cut(s)	203, 585, 1121, 1141, 1288, 1345, 1520, 1591, 1804
BmuI	ACTGGG	2 cut(s)	845, 1851
BpiI	GAAGAC	1 cut(s)	713
BplI	GAGNNNNNCTC	4 cut(s)	47, 79, 260, 292
BpmI	CTGGAG	1 cut(s)	358
BpuEI	CTTGAG	2 cut(s)	1688, 1940
Bsa29I	ATCGAT	1 cut(s)	789
BsaBI	GATNNNNATC	3 cut(s)	102, 123, 668
BsaJI	CCNNGG	4 cut(s)	168, 1013, 1244, 1310
BsaWI	WCCGGW	2 cut(s)	231, 822
BsaXI	ACNNNNNCTCC	4 cut(s)	994, 1024, 1814, 1844
Bsc4I	CCNNNNNNNGG	4 cut(s)	207, 805, 1316, 1579
Bse118I	RCCGGY	1 cut(s)	451
Bse1I	ACTGG	6 cut(s)	673, 840, 975, 1182, 1554, 1846
Bse3DI	GCAATG	1 cut(s)	227
Bse8I	GATNNNNATC	3 cut(s)	102, 123, 668
BseAI	TCCGGA	1 cut(s)	231
BseBI	CCWGG	3 cut(s)	246, 337, 842
BseCI	ATCGAT	1 cut(s)	789
BseDI	CCNNGG	4 cut(s)	168, 1013, 1244, 1310
BseGI	GGATG	7 cut(s)	121, 218, 669, 1240, 1306, 1546, 1757
BseJI	GATNNNNATC	3 cut(s)	102, 123, 668
BseLI	CCNNNNNNNGG	4 cut(s)	207, 805, 1316, 1579
BseMI	GCAATG	1 cut(s)	227
BseMII	CTCAG	4 cut(s)	977, 1191, 1408, 1854
BseNI	ACTGG	6 cut(s)	673, 840, 975, 1182, 1554, 1846
BseRI	GAGGAG	1 cut(s)	1703
BseSI	GKGCMC	1 cut(s)	1964
BseXI	GCAGC	5 cut(s)	407, 1350, 1669, 1882, 1931
BsgI	GTGCAG	1 cut(s)	1881
BshFI	GGCC	5 cut(s)	199, 348, 483, 840, 1668
BshVI	ATCGAT	1 cut(s)	789
BsiHKAI	GWGCWC	3 cut(s)	231, 1071, 1889
BsiHKCI	CYCGRG	1 cut(s)	428
BsiSI	CCGG	5 cut(s)	232, 452, 617, 823, 1131
BslFI	GGGAC	3 cut(s)	585, 928, 1467
BslI	CCNNNNNNNGG	4 cut(s)	207, 805, 1316, 1579
BsmAI	GTCTC	6 cut(s)	141, 535, 581, 824, 982, 1540
BsmFI	GGGAC	3 cut(s)	585, 928, 1467
BsnI	GGCC	5 cut(s)	199, 348, 483, 840, 1668
BsoBI	CYCGRG	1 cut(s)	428
Bsp1286I	GDGCHC	4 cut(s)	231, 1071, 1889, 1964
Bsp13I	TCCGGA	1 cut(s)	231
Bsp19I	CCATGG	3 cut(s)	168, 1244, 1310
BspACI	CCGC	4 cut(s)	690, 1488, 1604, 1976
BspANI	GGCC	5 cut(s)	199, 348, 483, 840, 1668
BspCNI	CTCAG	4 cut(s)	978, 1192, 1407, 1855
BspDI	ATCGAT	1 cut(s)	789
BspEI	TCCGGA	1 cut(s)	231
BspHI	TCATGA	1 cut(s)	801
BspLI	GGNNCC	5 cut(s)	174, 236, 665, 1031, 2026
BspPI	GGATC	5 cut(s)	268, 658, 671, 1269, 1716
BspQI	GCTCTTC	3 cut(s)	1059, 1917, 1929
BsrDI	GCAATG	1 cut(s)	227
BsrFI	RCCGGY	1 cut(s)	451
BsrI	ACTGG	6 cut(s)	673, 840, 975, 1182, 1554, 1846
BssAI	RCCGGY	1 cut(s)	451
BssECI	CCNNGG	4 cut(s)	168, 1013, 1244, 1310
BssNAI	GTATAC	1 cut(s)	1105
BssSI	CACGAG	1 cut(s)	1882
BssT1I	CCWWGG	4 cut(s)	168, 1013, 1244, 1310
Bst1107I	GTATAC	1 cut(s)	1105
Bst2BI	CACGAG	1 cut(s)	1882
Bst2UI	CCWGG	3 cut(s)	246, 337, 842
Bst4CI	ACNGT	5 cut(s)	928, 1006, 1496, 1519, 1582
Bst6I	CTCTTC	4 cut(s)	390, 1059, 1917, 1929
BstAPI	GCANNNNNTGC	2 cut(s)	226, 940
BstC8I	GCNNGC	5 cut(s)	165, 218, 316, 485, 1251
BstDEI	CTNAG	6 cut(s)	986, 1200, 1235, 1394, 1863, 1931
BstDSI	CCRYGG	3 cut(s)	168, 1244, 1310
BstENI	CCTNNNNNAGG	2 cut(s)	205, 803
BstF5I	GGATG	7 cut(s)	121, 218, 669, 1240, 1306, 1546, 1757
BstH2I	RGCGCY	1 cut(s)	518
BstHHI	GCGC	2 cut(s)	517, 1057
BstMAI	GTCTC	6 cut(s)	141, 535, 581, 824, 982, 1540
BstMWI	GCNNNNNNNGC	4 cut(s)	164, 226, 940, 1916
BstNI	CCWGG	3 cut(s)	246, 337, 842
BstNSI	RCATGY	1 cut(s)	491
BstSCI	CCNGG	3 cut(s)	244, 335, 840
BstSFI	CTRYAG	1 cut(s)	1890
BstSLI	GKGCMC	1 cut(s)	1964
BstV1I	GCAGC	5 cut(s)	407, 1350, 1669, 1882, 1931
BstV2I	GAAGAC	1 cut(s)	713
BstX2I	RGATCY	4 cut(s)	663, 1117, 1708, 1786
BstXI	CCANNNNNNTGG	1 cut(s)	758
BstYI	RGATCY	4 cut(s)	663, 1117, 1708, 1786
BstZ17I	GTATAC	1 cut(s)	1105
Bsu15I	ATCGAT	1 cut(s)	789
BsuI	GTATCC	1 cut(s)	1670
BsuRI	GGCC	5 cut(s)	199, 348, 483, 840, 1668
BsuTUI	ATCGAT	1 cut(s)	789
BtgI	CCRYGG	3 cut(s)	168, 1244, 1310
BtgZI	GCGATG	1 cut(s)	980
BtsCI	GGATG	7 cut(s)	121, 218, 669, 1240, 1306, 1546, 1757
BtsI	GCAGTG	2 cut(s)	153, 351
BtsIMutI	CAGTG	5 cut(s)	153, 351, 590, 833, 968
Cac8I	GCNNGC	5 cut(s)	165, 218, 316, 485, 1251
CciI	TCATGA	1 cut(s)	801
CfoI	GCGC	2 cut(s)	517, 1057
Cfr10I	RCCGGY	1 cut(s)	451
Cfr13I	GGNCC	3 cut(s)	198, 796, 838
ClaI	ATCGAT	1 cut(s)	789
Csp6I	GTAC	4 cut(s)	285, 440, 580, 1867
CspCI	CAANNNNNGTGG	2 cut(s)	859, 894
CviQI	GTAC	4 cut(s)	285, 440, 580, 1867
DdeI	CTNAG	6 cut(s)	986, 1200, 1235, 1394, 1863, 1931
DraI	TTTAAA	1 cut(s)	1696
EaeI	YGGCCR	1 cut(s)	346
Eam1104I	CTCTTC	4 cut(s)	390, 1059, 1917, 1929
EarI	CTCTTC	4 cut(s)	390, 1059, 1917, 1929
Ecl136II	GAGCTC	1 cut(s)	1887
Eco130I	CCWWGG	4 cut(s)	168, 1013, 1244, 1310
Eco147I	AGGCCT	2 cut(s)	483, 1668
Eco24I	GRGCYC	1 cut(s)	1889
Eco47I	GGWCC	1 cut(s)	796
Eco47III	AGCGCT	1 cut(s)	516
Eco53kI	GAGCTC	1 cut(s)	1887
Eco88I	CYCGRG	1 cut(s)	428
EcoICRI	GAGCTC	1 cut(s)	1887
EcoNI	CCTNNNNNAGG	2 cut(s)	205, 803
EcoO109I	RGGNCCY	1 cut(s)	796
EcoRI	GAATTC	2 cut(s)	739, 1949
EcoRII	CCWGG	3 cut(s)	244, 335, 840
EcoT14I	CCWWGG	4 cut(s)	168, 1013, 1244, 1310
EcoT22I	ATGCAT	1 cut(s)	1286
EcoT38I	GRGCYC	1 cut(s)	1889
ErhI	CCWWGG	4 cut(s)	168, 1013, 1244, 1310
FaqI	GGGAC	3 cut(s)	585, 928, 1467
FbaI	TGATCA	2 cut(s)	103, 880
FblI	GTMKAC	3 cut(s)	272, 1104, 1215
Fnu4HI	GCNGC	6 cut(s)	421, 1364, 1658, 1896, 1920, 1976
FokI	GGATG	7 cut(s)	128, 225, 656, 1227, 1293, 1553, 1764
FriOI	GRGCYC	1 cut(s)	1889
Fsp4HI	GCNGC	6 cut(s)	421, 1364, 1658, 1896, 1920, 1976
FspBI	CTAG	2 cut(s)	950, 1155
GlaI	GCGC	2 cut(s)	516, 1056
GluI	GCNGC	6 cut(s)	421, 1364, 1658, 1896, 1920, 1976
GsuI	CTGGAG	1 cut(s)	358
HaeII	RGCGCY	1 cut(s)	518
HaeIII	GGCC	5 cut(s)	199, 348, 483, 840, 1668
HapII	CCGG	5 cut(s)	232, 452, 617, 823, 1131
HhaI	GCGC	2 cut(s)	517, 1057
Hin6I	GCGC	2 cut(s)	515, 1055
HinP1I	GCGC	2 cut(s)	515, 1055
HincII	GTYRAC	2 cut(s)	273, 463
HindII	GTYRAC	2 cut(s)	273, 463
HindIII	AAGCTT	1 cut(s)	609
HinfI	GANTC	7 cut(s)	31, 178, 269, 307, 721, 965, 1757
HpaII	CCGG	5 cut(s)	232, 452, 617, 823, 1131
HphI	GGTGA	3 cut(s)	322, 742, 940
Hpy166II	GTNNAC	7 cut(s)	273, 463, 904, 1105, 1216, 1771, 1937
Hpy188I	TCNGA	9 cut(s)	91, 177, 268, 893, 1117, 1201, 1397, 1412, 1540
Hpy188III	TCNNGA	6 cut(s)	182, 232, 428, 570, 605, 802
Hpy8I	GTNNAC	7 cut(s)	273, 463, 904, 1105, 1216, 1771, 1937
HpyAV	CCTTC	7 cut(s)	37, 150, 799, 905, 1539, 1601, 1880
HpyCH4III	ACNGT	5 cut(s)	928, 1006, 1496, 1519, 1582
HpyCH4IV	ACGT	2 cut(s)	1079, 1767
HpyF10VI	GCNNNNNNNGC	4 cut(s)	164, 226, 940, 1916
HpyF3I	CTNAG	6 cut(s)	986, 1200, 1235, 1394, 1863, 1931
HpySE526I	ACGT	2 cut(s)	1079, 1767
HspAI	GCGC	2 cut(s)	515, 1055
Kpn2I	TCCGGA	1 cut(s)	231
Ksp22I	TGATCA	2 cut(s)	103, 880
LguI	GCTCTTC	3 cut(s)	1059, 1917, 1929
LmnI	GCTCC	3 cut(s)	234, 299, 1833
Lsp1109I	GCAGC	5 cut(s)	407, 1350, 1669, 1882, 1931
LweI	GCATC	9 cut(s)	203, 585, 1121, 1141, 1288, 1345, 1520, 1591, 1804
MaeI	CTAG	2 cut(s)	950, 1155
MaeII	ACGT	2 cut(s)	1079, 1767
MaeIII	GTNAC	4 cut(s)	1428, 1460, 1576, 1763
MflI	RGATCY	4 cut(s)	663, 1117, 1708, 1786
MhlI	GDGCHC	4 cut(s)	231, 1071, 1889, 1964
MlsI	TGGCCA	1 cut(s)	348
MluCI	AATT	8 cut(s)	5, 733, 739, 1195, 1205, 1384, 1733, 1949
MluNI	TGGCCA	1 cut(s)	348
MlyI	GAGTC	3 cut(s)	278, 301, 1766
MmeI	TCCRAC	1 cut(s)	1239
Mox20I	TGGCCA	1 cut(s)	348
Mph1103I	ATGCAT	1 cut(s)	1286
MroI	TCCGGA	1 cut(s)	231
MscI	TGGCCA	1 cut(s)	348
MseI	TTAA	5 cut(s)	27, 48, 1224, 1695, 1817
MslI	CAYNNNNRTG	3 cut(s)	99, 387, 1727
Msp20I	TGGCCA	1 cut(s)	348
MspI	CCGG	5 cut(s)	232, 452, 617, 823, 1131
MspR9I	CCNGG	3 cut(s)	246, 337, 842
MvaI	CCWGG	3 cut(s)	246, 337, 842
MwoI	GCNNNNNNNGC	4 cut(s)	164, 226, 940, 1916
NcoI	CCATGG	3 cut(s)	168, 1244, 1310
NlaIV	GGNNCC	5 cut(s)	174, 236, 665, 1031, 2026
NmuCI	GTSAC	2 cut(s)	1460, 1763
NsiI	ATGCAT	1 cut(s)	1286
NspI	RCATGY	1 cut(s)	491
PagI	TCATGA	1 cut(s)	801
PceI	AGGCCT	2 cut(s)	483, 1668
PciSI	GCTCTTC	3 cut(s)	1059, 1917, 1929
PfeI	GAWTC	4 cut(s)	31, 178, 721, 965
PkrI	GCNGC	6 cut(s)	422, 1365, 1659, 1897, 1921, 1977
PleI	GAGTC	3 cut(s)	277, 301, 1765
PpsI	GAGTC	3 cut(s)	277, 301, 1765
PpuMI	RGGWCCY	1 cut(s)	796
PsiI	TTATAA	1 cut(s)	627
Psp124BI	GAGCTC	1 cut(s)	1889
Psp1406I	AACGTT	1 cut(s)	1079
Psp5II	RGGWCCY	1 cut(s)	796
Psp6I	CCWGG	3 cut(s)	244, 335, 840
PspGI	CCWGG	3 cut(s)	244, 335, 840
PspN4I	GGNNCC	5 cut(s)	174, 236, 665, 1031, 2026
PspPI	GGNCC	3 cut(s)	198, 796, 838
PspPPI	RGGWCCY	1 cut(s)	796
PsrI	GAACNNNNNNTAC	2 cut(s)	1831, 1863
PsuI	RGATCY	4 cut(s)	663, 1117, 1708, 1786
RsaI	GTAC	4 cut(s)	286, 441, 581, 1868
RsaNI	GTAC	4 cut(s)	285, 440, 580, 1867
RseI	CAYNNNNRTG	3 cut(s)	99, 387, 1727
SacI	GAGCTC	1 cut(s)	1889
SalI	GTCGAC	1 cut(s)	271
SapI	GCTCTTC	3 cut(s)	1059, 1917, 1929
SaqAI	TTAA	5 cut(s)	27, 48, 1224, 1695, 1817
SatI	GCNGC	6 cut(s)	421, 1364, 1658, 1896, 1920, 1976
Sau96I	GGNCC	3 cut(s)	198, 796, 838
ScaI	AGTACT	1 cut(s)	581
SchI	GAGTC	3 cut(s)	278, 301, 1766
ScrFI	CCNGG	3 cut(s)	246, 337, 842
SduI	GDGCHC	4 cut(s)	231, 1071, 1889, 1964
SfaNI	GCATC	9 cut(s)	203, 585, 1121, 1141, 1288, 1345, 1520, 1591, 1804
SfcI	CTRYAG	1 cut(s)	1890
SinI	GGWCC	1 cut(s)	796
SmiMI	CAYNNNNRTG	3 cut(s)	99, 387, 1727
SmlI	CTYRAG	2 cut(s)	1703, 1955
SmoI	CTYRAG	2 cut(s)	1703, 1955
Sse9I	AATT	8 cut(s)	5, 733, 739, 1195, 1205, 1384, 1733, 1949
SseBI	AGGCCT	2 cut(s)	483, 1668
SsiI	CCGC	4 cut(s)	690, 1488, 1604, 1976
SspI	AATATT	1 cut(s)	1407
SspMI	CTAG	2 cut(s)	950, 1155
SstI	GAGCTC	1 cut(s)	1889
StuI	AGGCCT	2 cut(s)	483, 1668
StyD4I	CCNGG	3 cut(s)	244, 335, 840
StyI	CCWWGG	4 cut(s)	168, 1013, 1244, 1310
TaaI	ACNGT	5 cut(s)	928, 1006, 1496, 1519, 1582
TaiI	ACGT	2 cut(s)	1082, 1770
TaqI	TCGA	7 cut(s)	272, 305, 789, 979, 1349, 1716, 2000
TasI	AATT	8 cut(s)	5, 733, 739, 1195, 1205, 1384, 1733, 1949
TatI	WGTACW	2 cut(s)	439, 579
TauI	GCSGC	1 cut(s)	1978
TfiI	GAWTC	4 cut(s)	31, 178, 721, 965
Tru1I	TTAA	5 cut(s)	27, 48, 1224, 1695, 1817
Tru9I	TTAA	5 cut(s)	27, 48, 1224, 1695, 1817
TscAI	CASTG	5 cut(s)	160, 358, 597, 840, 975
TseFI	GTSAC	2 cut(s)	1460, 1763
TseI	GCWGC	5 cut(s)	420, 1363, 1657, 1895, 1919
Tsp45I	GTSAC	2 cut(s)	1460, 1763
TspGWI	ACGGA	1 cut(s)	1689
TspRI	CASTG	5 cut(s)	160, 358, 597, 840, 975
VpaK11BI	GGWCC	1 cut(s)	796
XagI	CCTNNNNNAGG	2 cut(s)	205, 803
XapI	RAATTY	4 cut(s)	733, 739, 1195, 1949
XceI	RCATGY	1 cut(s)	491
XcmI	CCANNNNNNNNNTGG	1 cut(s)	252
XmiI	GTMKAC	3 cut(s)	272, 1104, 1215
XspI	CTAG	2 cut(s)	950, 1155
ZrmI	AGTACT	1 cut(s)	581
Zsp2I	ATGCAT	1 cut(s)	1286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.