Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006120

Physical Location & Seq

Genomic Coordinates Forward (+)

74250911 .. 74259310

Gene Structure 8400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021337

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGAATCGCCAGACTACTCTTTGATTAACAATCTTGCAATGAAGGTTAAAAAGGAGATGTTCTCATTTTCATCTTCATCTTCATCATCAGAACATGATGATGATCATGTAGTTGATGGTTTATATCGTCTTGTGTCTCCTTCTGCTTACGATACTGCTTGGCTCGCCATGGTTCCAAATCCTCAAAAACCAGATTGGCCCTTGTTCCGGGGATGCTTGCATTGGGTGCTCCGGAACCAAAAACCAGGAGGCTTCTGGGGATCATCAGCGTCGTCTGCCATAAGGTTGGGATTCATTCATGCAAATGCAGAAGAGATACTGAAAGAGAAAAATGGCTGGTTTCCCGATTGGTTTGTGCTCCTTTTTCCGGCAATAGTTGACCTTGCAAAGACCAAAGACCTGCATGTTCATTTCTCAAATGGTTCAAAAGGACTTATACAACAGGTCTTCCATGAGAGACAACAACTATTCCAAATCAACAGGTCGGGACAACAGTACTATGAGACACTGATGCCATATCTTGAAGCTTTGCCGGAGAGTTATAATGAGATTTTGCTACAACAGAGTGACGATTATGGGCTCCTCATCCAGTCCCCATCAGCCACCGCCTATGCTTTTATGAAGACAGGAAATAAGAGGTTTTTGGCCAATTTGAAGTCTGTTGTCCAAAGATGTGGATATGGAGAGTTTAGAAACACGGGTGTTGCATTGAAGCCTCAAAATCGTGTTATGCCAAAAATATTTCGGGTTTGTCTTATTGACCGGATTGAGACACTGGGCCTGGCAGAGTATTTCATGGACGAGATAACCACTCTACTTGATCAAAGCAGTAGTTATGTGAACAATGAAGGGACAAAGATGACGGTGAAGCATGGTCTGCTTCCACTAGAACTTTATGGAGATTCACTGGCATTTCGACTACTGAGACTACATCGCTATACTGTATCTCCTTGGAAGTTCTGCTGGTTCCTCCAAGATGAAGATATATTGGCGCACATTGAAGAGCACGATGAAACGTTTTTGAATCTTACTTTTGCCGGAGAAAGTCAGTTTGAAGATGCTATGTTATTCTCTACAAGAATACTGGAAAAAGAAACAACAAATTCTGAGAAATTGCTGGTAGACCAGATTAAGCATGAATTTAGTCATCCATGGTTCGCTCGGTTGGATCATCTAGAACACAGGAAATGCATTGAGAGGGAAGATACTATTCATCCACGGACAGGAAAAGCCTTTTCGTATAGACTATCATTTTCTAGTGATGCTATGCTGCAACAACTTGCCATAGAGAATTATTCAGTCAGACAATCAATATTCAGAGATGAAGTAACCGAGTTACAGAGGTGGTCAAAGGACATGGGACTTTGTGACATGGGGTTTGCACGACAGAAAACCGCATACTGTTATTTTGCAGTTGCATCAACTGTATCATCTCCTTCCCTTTCGGATGTGAGACTGGCACTTGTCAAAAGTGCAATCCTTGTTACGGTGGCTGATGATTTTTTTGATGCGGAAGGTTCATTGAGTGATCTCAAAAGTTTTACAAATGCCGTCAAAAGACGTCAGCAGATAGGCCTGAATGGACACAGCAAAACTATATTTAAAGCTCTCAAGGATATCCTCGATGACATTTCTATGCAATTCTTCAATAAATATGGATATGACGTAAACATATACCTTCAAGATCTAAGTGGAGCAGTAGGGCATACCCCATCAATAGCTGAGTACCTTCAAGTAGCGACGAGTTCAATAGCTGCACAAACTATTGTTCTTCCAGCAGCTCTTCTCCTTAGTCCACAACTCGGAATAGACATCCTCAAGTGCCCTCAAAATGAGCCGCTTACAAATTTACTTATGGTTTCAACTCGCCTTTTGAACGATATTGGAACCTATGAGCGGGAACAAGAGGAGGGGAAGCCAAGCCTTGTTCTGCTACACATGAAGGAAAATCCGAATCTGGGAGTTGAAGAATCAATTGAGGTTATACAAAAGATGTTGGACGAAACGAAGAAACAGTTTCTGGAACAGGCTTTCTTGCATCAGACACCTTTACCTTCAATTCGATCAAATACAACTGAAAAGGTAAAGATTCGGGACATTGTTTTCGGTTGTGGATTTAATCAACAAGGTCTGGATGCTTTGGTACGGATGGATGCAATGTTGCTGGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001101 GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006979 GO:0007584 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031667 GO:0042221 GO:0042493 GO:0043207 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0080013 GO:0080027 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00904 map00904

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

724

Amino Acids

82.28

Weight (kDa)

5.67

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	246 - 380	1.2e-17	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	451 - 671	2.1e-42	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	491 - 671	1.6e-25	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61120
malus_domestica	MD17G1080300.v1.1 MD17G1080400.v1.1 MD17G1080500.v1.1 MD17G1080700.v1.1 MD17G1080800.v1.1
prunus_persica	Prupe.3G234300_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234400_v2.0.a1 Prupe.3G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0162311
rosa_laevigata	RLG00000021334 RLG00000021337
rosa_multiflora	Rmu_co8462281.1_g000001 Rmu_sc0004020.1_g000013
rosa_roxburghii	Rroxscaffold_2G00088040 Rroxscaffold_2G00088060 Rroxscaffold_2G00088110
rosa_rugosa	Rorug02G0496200 Rorug02G0496300
rosa_samantha	Rh2AG562300 Rh2AG562400 Rh2BG575400 Rh2CG545800 Rh2DG585200 Rh2DG585600
rosa_wichuraiana	Rw2G046570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	543
AatII	GACGTC	1 cut(s)	1564
Acc36I	ACCTGC	1 cut(s)	408
AccBSI	CCGCTC	1 cut(s)	1897
AccI	GTMKAC	1 cut(s)	1122
AccIII	TCCGGA	1 cut(s)	231
AciI	CCGC	5 cut(s)	606, 1395, 1511, 1838, 1897
AclI	AACGTT	1 cut(s)	1016
AclWI	GGATC	2 cut(s)	268, 1176
AcoI	YGGCCR	1 cut(s)	645
AcsI	RAATTY	3 cut(s)	1102, 1139, 1846
AcyI	GRCGYC	1 cut(s)	1561
AfaI	GTAC	3 cut(s)	497, 1727, 2145
AfiI	CCNNNNNNNGG	7 cut(s)	207, 367, 1223, 1486, 1802, 1896, 1958
AjnI	CCWGG	2 cut(s)	244, 780
AluBI	AGCT	5 cut(s)	527, 1607, 1721, 1754, 1781
AluI	AGCT	5 cut(s)	527, 1607, 1721, 1754, 1781
Alw21I	GWGCWC	3 cut(s)	231, 360, 1008
Alw26I	GTCTC	6 cut(s)	141, 451, 497, 764, 919, 1447
AlwI	GGATC	2 cut(s)	268, 1176
AlwNI	CAGNNNCTG	1 cut(s)	2020
Aor13HI	TCCGGA	1 cut(s)	231
AoxI	GGCC	4 cut(s)	197, 645, 778, 1573
ApeKI	GCWGC	3 cut(s)	1270, 1754, 1778
ApoI	RAATTY	3 cut(s)	1102, 1139, 1846
ArsI	GACNNNNNNTTYG	4 cut(s)	1361, 1393, 2087, 2119
AspLEI	GCGC	1 cut(s)	994
AspS9I	GGNCC	2 cut(s)	198, 778
AsuC2I	CCSGG	1 cut(s)	209
AsuHPI	GGTGA	1 cut(s)	877
BaeGI	GKGCMC	1 cut(s)	1826
BalI	TGGCCA	1 cut(s)	647
BanII	GRGCYC	1 cut(s)	582
BbsI	GAAGAC	2 cut(s)	439, 629
Bbv12I	GWGCWC	3 cut(s)	231, 360, 1008
BbvI	GCAGC	3 cut(s)	1257, 1741, 1790
BccI	CCATC	4 cut(s)	110, 604, 1720, 2143
BceAI	ACGGC	1 cut(s)	1535
BciT130I	CCWGG	2 cut(s)	246, 782
BclI	TGATCA	2 cut(s)	103, 820
BcnI	CCSGG	1 cut(s)	209
BcoDI	GTCTC	6 cut(s)	141, 451, 497, 764, 919, 1447
BfaI	CTAG	3 cut(s)	887, 1175, 1257
BfuAI	ACCTGC	1 cut(s)	408
BglII	AGATCT	1 cut(s)	1684
BisI	GCNGC	4 cut(s)	1271, 1755, 1779, 1838
BlsI	GCNGC	4 cut(s)	1272, 1756, 1780, 1839
BmcAI	AGTACT	1 cut(s)	497
Bme1390I	CCNGG	3 cut(s)	209, 246, 782
BmgT120I	GGNCC	2 cut(s)	198, 778
BmiI	GGNNCC	5 cut(s)	174, 236, 581, 968, 1888
BmrFI	CCNGG	3 cut(s)	209, 246, 782
BmrI	ACTGGG	1 cut(s)	785
BmsI	GCATC	9 cut(s)	203, 501, 1048, 1252, 1427, 1498, 2047, 2125, 2143
BmuI	ACTGGG	1 cut(s)	785
BpiI	GAAGAC	2 cut(s)	439, 629
BplI	GAGNNNNNCTC	2 cut(s)	47, 79
BpuEI	CTTGAG	2 cut(s)	1595, 1802
BpuMI	CCSGG	1 cut(s)	209
BsaBI	GATNNNNATC	1 cut(s)	102
BsaHI	GRCGYC	1 cut(s)	1561
BsaJI	CCNNGG	5 cut(s)	168, 208, 950, 1151, 1217
BsaWI	WCCGGW	2 cut(s)	231, 762
BsaXI	ACNNNNNCTCC	2 cut(s)	931, 961
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 367, 1223, 1486, 1802, 1896, 1958
Bse1I	ACTGG	5 cut(s)	589, 780, 912, 1089, 1461
Bse3DI	GCAATG	2 cut(s)	45, 2163
Bse8I	GATNNNNATC	1 cut(s)	102
BseAI	TCCGGA	1 cut(s)	231
BseBI	CCWGG	2 cut(s)	246, 782
BseDI	CCNNGG	5 cut(s)	168, 208, 950, 1151, 1217
BseGI	GGATG	9 cut(s)	218, 585, 1147, 1213, 1453, 1812, 2140, 2154, 2158
BseJI	GATNNNNATC	1 cut(s)	102
BseLI	CCNNNNNNNGG	7 cut(s)	207, 367, 1223, 1486, 1802, 1896, 1958
BseMI	GCAATG	2 cut(s)	45, 2163
BseMII	CTCAG	3 cut(s)	914, 1098, 1713
BseNI	ACTGG	5 cut(s)	589, 780, 912, 1089, 1461
BseRI	GAGGAG	2 cut(s)	572, 1922
BseSI	GKGCMC	1 cut(s)	1826
BseXI	GCAGC	3 cut(s)	1257, 1741, 1790
BseYI	CCCAGC	1 cut(s)	2164
BsgI	GTGCAG	1 cut(s)	1740
BshFI	GGCC	4 cut(s)	199, 647, 780, 1575
BsiHKAI	GWGCWC	3 cut(s)	231, 360, 1008
BsiSI	CCGG	6 cut(s)	208, 232, 368, 533, 763, 1038
BslFI	GGGAC	5 cut(s)	501, 577, 865, 1374, 2108
BslI	CCNNNNNNNGG	7 cut(s)	207, 367, 1223, 1486, 1802, 1896, 1958
BsmAI	GTCTC	6 cut(s)	141, 451, 497, 764, 919, 1447
BsmFI	GGGAC	5 cut(s)	501, 577, 865, 1374, 2108
BsnI	GGCC	4 cut(s)	199, 647, 780, 1575
Bsp1286I	GDGCHC	5 cut(s)	231, 360, 582, 1008, 1826
Bsp13I	TCCGGA	1 cut(s)	231
Bsp143I	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
Bsp19I	CCATGG	2 cut(s)	168, 1151
BspACI	CCGC	5 cut(s)	606, 1395, 1511, 1838, 1897
BspANI	GGCC	4 cut(s)	199, 647, 780, 1575
BspCNI	CTCAG	3 cut(s)	915, 1099, 1714
BspEI	TCCGGA	1 cut(s)	231
BspLI	GGNNCC	5 cut(s)	174, 236, 581, 968, 1888
BspMI	ACCTGC	1 cut(s)	408
BspPI	GGATC	2 cut(s)	268, 1176
BspQI	GCTCTTC	2 cut(s)	996, 1788
BsrBI	CCGCTC	1 cut(s)	1897
BsrDI	GCAATG	2 cut(s)	45, 2163
BsrI	ACTGG	5 cut(s)	589, 780, 912, 1089, 1461
BssECI	CCNNGG	5 cut(s)	168, 208, 950, 1151, 1217
BssMI	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
BssNI	GRCGYC	1 cut(s)	1561
BssT1I	CCWWGG	3 cut(s)	168, 950, 1151
Bst2UI	CCWGG	2 cut(s)	246, 782
Bst4CI	ACNGT	7 cut(s)	495, 865, 943, 1403, 1426, 1489, 2016
Bst6I	CTCTTC	3 cut(s)	306, 996, 1788
BstACI	GRCGYC	1 cut(s)	1561
BstAPI	GCANNNNNTGC	2 cut(s)	226, 877
BstC8I	GCNNGC	2 cut(s)	165, 218
BstDEI	CTNAG	5 cut(s)	923, 1107, 1688, 1722, 1790
BstDSI	CCRYGG	3 cut(s)	168, 1151, 1217
BstF5I	GGATG	9 cut(s)	218, 585, 1147, 1213, 1453, 1812, 2140, 2154, 2158
BstHHI	GCGC	1 cut(s)	994
BstKTI	GATC	7 cut(s)	106, 263, 823, 1171, 1531, 1687, 2066
BstMAI	GTCTC	6 cut(s)	141, 451, 497, 764, 919, 1447
BstMBI	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
BstMWI	GCNNNNNNNGC	4 cut(s)	164, 226, 275, 877
BstNI	CCWGG	2 cut(s)	246, 782
BstNSI	RCATGY	1 cut(s)	407
BstSCI	CCNGG	3 cut(s)	207, 244, 780
BstSLI	GKGCMC	1 cut(s)	1826
BstV1I	GCAGC	3 cut(s)	1257, 1741, 1790
BstV2I	GAAGAC	2 cut(s)	439, 629
BstX2I	RGATCY	1 cut(s)	1684
BstXI	CCANNNNNNTGG	2 cut(s)	286, 674
BstYI	RGATCY	1 cut(s)	1684
BsuRI	GGCC	4 cut(s)	199, 647, 780, 1575
BtgI	CCRYGG	3 cut(s)	168, 1151, 1217
BtgZI	GCGATG	1 cut(s)	917
BtsCI	GGATG	9 cut(s)	218, 585, 1147, 1213, 1453, 1812, 2140, 2154, 2158
BtsIMutI	CAGTG	3 cut(s)	506, 773, 905
BveI	ACCTGC	1 cut(s)	408
Cac8I	GCNNGC	2 cut(s)	165, 218
CaiI	CAGNNNCTG	1 cut(s)	2020
CfoI	GCGC	1 cut(s)	994
Cfr13I	GGNCC	2 cut(s)	198, 778
CseI	GACGC	1 cut(s)	258
Csp6I	GTAC	3 cut(s)	496, 1726, 2144
CspCI	CAANNNNNGTGG	2 cut(s)	799, 834
CviQI	GTAC	3 cut(s)	496, 1726, 2144
DdeI	CTNAG	5 cut(s)	923, 1107, 1688, 1722, 1790
DpnI	GATC	7 cut(s)	105, 262, 822, 1170, 1530, 1686, 2065
DpnII	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
DraI	TTTAAA	1 cut(s)	1603
EaeI	YGGCCR	1 cut(s)	645
Eam1104I	CTCTTC	3 cut(s)	306, 996, 1788
EarI	CTCTTC	3 cut(s)	306, 996, 1788
Eco130I	CCWWGG	3 cut(s)	168, 950, 1151
Eco147I	AGGCCT	1 cut(s)	1575
Eco24I	GRGCYC	1 cut(s)	582
Eco32I	GATATC	1 cut(s)	1618
EcoRII	CCWGG	2 cut(s)	244, 780
EcoRV	GATATC	1 cut(s)	1618
EcoT14I	CCWWGG	3 cut(s)	168, 950, 1151
EcoT22I	ATGCAT	1 cut(s)	1193
EcoT38I	GRGCYC	1 cut(s)	582
ErhI	CCWWGG	3 cut(s)	168, 950, 1151
FaqI	GGGAC	5 cut(s)	501, 577, 865, 1374, 2108
FauI	CCCGC	1 cut(s)	1890
FbaI	TGATCA	2 cut(s)	103, 820
FblI	GTMKAC	1 cut(s)	1122
Fnu4HI	GCNGC	4 cut(s)	1271, 1755, 1779, 1838
FokI	GGATG	9 cut(s)	225, 572, 1134, 1200, 1460, 1799, 2147, 2161, 2165
FriOI	GRGCYC	1 cut(s)	582
Fsp4HI	GCNGC	4 cut(s)	1271, 1755, 1779, 1838
FspBI	CTAG	3 cut(s)	887, 1175, 1257
GlaI	GCGC	1 cut(s)	993
GluI	GCNGC	4 cut(s)	1271, 1755, 1779, 1838
GsaI	CCCAGC	1 cut(s)	2168
HaeIII	GGCC	4 cut(s)	199, 647, 780, 1575
HapII	CCGG	6 cut(s)	208, 232, 368, 533, 763, 1038
HgaI	GACGC	1 cut(s)	258
HhaI	GCGC	1 cut(s)	994
Hin1I	GRCGYC	1 cut(s)	1561
Hin6I	GCGC	1 cut(s)	992
HinP1I	GCGC	1 cut(s)	992
HincII	GTYRAC	1 cut(s)	379
HindII	GTYRAC	1 cut(s)	379
HindIII	AAGCTT	1 cut(s)	525
HinfI	GANTC	7 cut(s)	5, 291, 902, 1024, 1954, 1970, 2089
HpaII	CCGG	6 cut(s)	208, 232, 368, 533, 763, 1038
HphI	GGTGA	1 cut(s)	877
Hpy166II	GTNNAC	5 cut(s)	379, 841, 1123, 1669, 1796
Hpy188I	TCNGA	8 cut(s)	91, 1108, 1304, 1319, 1447, 1805, 1953, 2043
Hpy188III	TCNNGA	9 cut(s)	232, 344, 486, 521, 1175, 1682, 2021, 2093, 2132
Hpy8I	GTNNAC	5 cut(s)	379, 841, 1123, 1669, 1796
Hpy99I	CGWCG	2 cut(s)	274, 1744
HpyAV	CCTTC	9 cut(s)	37, 150, 842, 1446, 1508, 1688, 1739, 1936, 2064
HpyCH4III	ACNGT	7 cut(s)	495, 865, 943, 1403, 1426, 1489, 2016
HpyCH4IV	ACGT	3 cut(s)	1016, 1561, 1665
HpyF10VI	GCNNNNNNNGC	4 cut(s)	164, 226, 275, 877
HpyF3I	CTNAG	5 cut(s)	923, 1107, 1688, 1722, 1790
HpySE526I	ACGT	3 cut(s)	1016, 1561, 1665
Hsp92I	GRCGYC	1 cut(s)	1561
HspAI	GCGC	1 cut(s)	992
Kpn2I	TCCGGA	1 cut(s)	231
Ksp22I	TGATCA	2 cut(s)	103, 820
Kzo9I	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
LguI	GCTCTTC	2 cut(s)	996, 1788
LmnI	GCTCC	4 cut(s)	234, 363, 585, 1694
Lsp1109I	GCAGC	3 cut(s)	1257, 1741, 1790
LweI	GCATC	9 cut(s)	203, 501, 1048, 1252, 1427, 1498, 2047, 2125, 2143
MaeI	CTAG	3 cut(s)	887, 1175, 1257
MaeII	ACGT	3 cut(s)	1016, 1561, 1665
MaeIII	GTNAC	5 cut(s)	566, 1327, 1335, 1367, 1483
MalI	GATC	7 cut(s)	105, 262, 822, 1170, 1530, 1686, 2065
MbiI	CCGCTC	1 cut(s)	1897
MboI	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
MfeI	CAATTG	1 cut(s)	1974
MflI	RGATCY	1 cut(s)	1684
MhlI	GDGCHC	5 cut(s)	231, 360, 582, 1008, 1826
MlsI	TGGCCA	1 cut(s)	647
MluCI	AATT	9 cut(s)	649, 1102, 1112, 1139, 1291, 1640, 1846, 1974, 2058
MluNI	TGGCCA	1 cut(s)	647
MmeI	TCCRAC	2 cut(s)	1146, 1977
Mox20I	TGGCCA	1 cut(s)	647
Mph1103I	ATGCAT	1 cut(s)	1193
MroI	TCCGGA	1 cut(s)	231
MscI	TGGCCA	1 cut(s)	647
MseI	TTAA	5 cut(s)	27, 48, 1131, 1602, 2118
MslI	CAYNNNNRTG	3 cut(s)	99, 303, 1634
Msp20I	TGGCCA	1 cut(s)	647
MspI	CCGG	6 cut(s)	208, 232, 368, 533, 763, 1038
MspR9I	CCNGG	3 cut(s)	209, 246, 782
MunI	CAATTG	1 cut(s)	1974
MvaI	CCWGG	2 cut(s)	246, 782
MwoI	GCNNNNNNNGC	4 cut(s)	164, 226, 275, 877
NciI	CCSGG	1 cut(s)	209
NcoI	CCATGG	2 cut(s)	168, 1151
NdeII	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
NlaIV	GGNNCC	5 cut(s)	174, 236, 581, 968, 1888
NmuCI	GTSAC	2 cut(s)	566, 1367
NsiI	ATGCAT	1 cut(s)	1193
NspI	RCATGY	1 cut(s)	407
PceI	AGGCCT	1 cut(s)	1575
PciSI	GCTCTTC	2 cut(s)	996, 1788
PfeI	GAWTC	7 cut(s)	5, 291, 902, 1024, 1954, 1970, 2089
PkrI	GCNGC	4 cut(s)	1272, 1756, 1780, 1839
PsiI	TTATAA	1 cut(s)	543
Psp1406I	AACGTT	1 cut(s)	1016
Psp6I	CCWGG	2 cut(s)	244, 780
PspFI	CCCAGC	1 cut(s)	2164
PspGI	CCWGG	2 cut(s)	244, 780
PspN4I	GGNNCC	5 cut(s)	174, 236, 581, 968, 1888
PspPI	GGNCC	2 cut(s)	198, 778
PstNI	CAGNNNCTG	1 cut(s)	2020
PsuI	RGATCY	1 cut(s)	1684
RsaI	GTAC	3 cut(s)	497, 1727, 2145
RsaNI	GTAC	3 cut(s)	496, 1726, 2144
RseI	CAYNNNNRTG	3 cut(s)	99, 303, 1634
SapI	GCTCTTC	2 cut(s)	996, 1788
SaqAI	TTAA	5 cut(s)	27, 48, 1131, 1602, 2118
SatI	GCNGC	4 cut(s)	1271, 1755, 1779, 1838
Sau3AI	GATC	7 cut(s)	103, 260, 820, 1168, 1528, 1684, 2063
Sau96I	GGNCC	2 cut(s)	198, 778
ScaI	AGTACT	1 cut(s)	497
ScrFI	CCNGG	3 cut(s)	209, 246, 782
SduI	GDGCHC	5 cut(s)	231, 360, 582, 1008, 1826
SfaNI	GCATC	9 cut(s)	203, 501, 1048, 1252, 1427, 1498, 2047, 2125, 2143
SmiMI	CAYNNNNRTG	3 cut(s)	99, 303, 1634
SmlI	CTYRAG	2 cut(s)	1610, 1817
SmoI	CTYRAG	2 cut(s)	1610, 1817
Sse9I	AATT	9 cut(s)	649, 1102, 1112, 1139, 1291, 1640, 1846, 1974, 2058
SseBI	AGGCCT	1 cut(s)	1575
SsiI	CCGC	5 cut(s)	606, 1395, 1511, 1838, 1897
SspI	AATATT	2 cut(s)	741, 1314
SspMI	CTAG	3 cut(s)	887, 1175, 1257
StuI	AGGCCT	1 cut(s)	1575
StyD4I	CCNGG	3 cut(s)	207, 244, 780
StyI	CCWWGG	3 cut(s)	168, 950, 1151
TaaI	ACNGT	7 cut(s)	495, 865, 943, 1403, 1426, 1489, 2016
TaiI	ACGT	3 cut(s)	1019, 1564, 1668
TaqI	TCGA	3 cut(s)	916, 1623, 2062
TasI	AATT	9 cut(s)	649, 1102, 1112, 1139, 1291, 1640, 1846, 1974, 2058
TatI	WGTACW	1 cut(s)	495
TauI	GCSGC	1 cut(s)	1840
TfiI	GAWTC	7 cut(s)	5, 291, 902, 1024, 1954, 1970, 2089
Tru1I	TTAA	5 cut(s)	27, 48, 1131, 1602, 2118
Tru9I	TTAA	5 cut(s)	27, 48, 1131, 1602, 2118
TscAI	CASTG	3 cut(s)	513, 780, 912
TseFI	GTSAC	2 cut(s)	566, 1367
TseI	GCWGC	3 cut(s)	1270, 1754, 1778
Tsp45I	GTSAC	2 cut(s)	566, 1367
TspGWI	ACGGA	2 cut(s)	1234, 2161
TspRI	CASTG	3 cut(s)	513, 780, 912
XapI	RAATTY	3 cut(s)	1102, 1139, 1846
XbaI	TCTAGA	1 cut(s)	1174
XceI	RCATGY	1 cut(s)	407
XcmI	CCANNNNNNNNNTGG	1 cut(s)	252
XmiI	GTMKAC	1 cut(s)	1122
XspI	CTAG	3 cut(s)	887, 1175, 1257
ZraI	GACGTC	1 cut(s)	1562
ZrmI	AGTACT	1 cut(s)	497
Zsp2I	ATGCAT	1 cut(s)	1193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.