Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004710

Physical Location & Seq

Genomic Coordinates Reverse (-)

4337981 .. 4344573

Gene Structure 6593 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G061400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1017 bp

ATGAACAGGATCGCGGTGAGGTCAGTTGTGGGCGGTCTGCGCAGTGGCCAGAACTGCAACAGCTACATTTCCACGGCGGTGCCCGTCAGGCCATTGGACGGGGCCGAGTTTCTGCATTCCCTGAAGGGTGACCTTTCGGGCGGCTTTTACTGGACGAGGATGATGAGCACAGTGCCGCAGTCTGCTAAAACGGTGGAGGAGTGGAGGGAGAGCAAGAGCTCAGTCTCCGACGATGCGAAGAAAGGAAGTGATAGGGTAGTAGTTTCGGATTACTGGGGGATTTATAGGCCGAAGATCACAAGGGAGGACGTGAGCGAGTGGACTTGGAATTGCTTCATGCCATGGGATACTTATAAACCGGACTTATCGATCGATCTGAGCAAGCACCATGTGCCAAAGACGTTTATGGACAGATTTGCGTATAGGACCGTCAAGGTTCTTCGGATGCCAACTGATATTTTCTTTAAGAGACGGTATGGGTGTCGTGCAATGATGCTGGAAACTGTGGCAGCTGTCCCTGGCATTGTGGGAGGAATGGTACTGCACTTAAGGTCTCTCCGCAAGTTCCAGCAGAGCGGTGGTTGGGTCAAGGCTCTACTTGAAGAGGCAGAGAATGAGAGGATGCACCTCATGACAATGGTGGAACTTGTACAGCCCATGTGGTACGAGAGGCTACTGGTTCTTGTTGTGCAGGGAGTGTTCTTCAATGCCTTCTTTGTTCTTTATTTGCTTTCTCCCAAACTGGCGCATAGGATTGTTGGGTATCTGGAGGAGGAGGCTATACACTCTTATACAGAGTATTTGAAGGATATCGATAGTGGAAAGATTGAAAATGTACAAGCTCCTGCAATCGCAATCGACTACTGGAGGCTTCCTAAAGATGCTACGCTAAGGAATGTTATTACTGTGATTCGTGCCGATGAAGCTCATCATCGAGATGTCAACCATTATGCATCTGATATTCAATTTCAGGGTAAGGAATTGAGAGAGGCACCGGCTCCCTCTGATTATCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AOX

Protein Analysis

339

Amino Acids

38.92

Weight (kDa)

8.28

Isoelectric Point (pI)

40.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64210
fragaria_vesca	FvH4_4g05920 FvH4_4g05930
malus_domestica	MD13G1231500.v1.1 MD16G1236400.v1.1
prunus_persica	Prupe.1G061400_v2.0.a1 Prupe.1G061800_v2.0.a1 Prupe.1G061800_v2.0.a1 Prupe.1G061900_v2.0.a1 Prupe.1G061900_v2.0.a1
pyrus_communis	pycom16g19830
rosa_chinensis	RchiOBHm_Chr4g0397091 RchiOBHm_Chr4g0397111
rosa_laevigata	RLG00000009450
rosa_multiflora	Rmu_sc0002312.1_g000026 Rmu_sc0002312.1_g000031 Rmu_sc0007785.1_g000028 Rmu_sc0007785.1_g000034
rosa_roxburghii	Rroxscaffold_5G00342060 Rroxscaffold_5G00342080
rosa_rugosa	Rorug03G0344700 Rorug03G0344800
rosa_samantha	Rh4AG077300 Rh4BG072900 Rh4CG082500 Rh4DG070400 Rh4DG070500
rosa_wichuraiana	Rw0G015790 Rw0G015800 Rw4G006240 Rw4G006250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	354
Acc16I	TGCGCA	1 cut(s)	41
AccB1I	GGYRCC	2 cut(s)	79, 991
AccBSI	CCGCTC	1 cut(s)	576
AccII	CGCG	1 cut(s)	14
AciI	CCGC	7 cut(s)	14, 33, 77, 141, 176, 559, 576
AclWI	GGATC	1 cut(s)	17
AcoI	YGGCCR	1 cut(s)	46
AcuI	CTGAAG	1 cut(s)	143
AdeI	CACNNNGTG	1 cut(s)	391
AfaI	GTAC	4 cut(s)	540, 651, 665, 837
AfiI	CCNNNNNNNGG	1 cut(s)	98
AflII	CTTAAG	1 cut(s)	547
AgsI	TTSAA	5 cut(s)	602, 706, 805, 830, 965
AjiI	CACGTC	1 cut(s)	310
AjnI	CCWGG	1 cut(s)	517
AleI	CACNNNNGTG	1 cut(s)	77
AluBI	AGCT	5 cut(s)	63, 219, 512, 842, 926
AluI	AGCT	5 cut(s)	63, 219, 512, 842, 926
Alw21I	GWGCWC	2 cut(s)	170, 221
Alw26I	GTCTC	3 cut(s)	229, 463, 558
AlwI	GGATC	1 cut(s)	17
AoxI	GGCC	4 cut(s)	46, 89, 102, 287
ApeKI	GCWGC	1 cut(s)	509
Asp700I	GAANNNNTTC	1 cut(s)	332
AspLEI	GCGC	2 cut(s)	42, 748
AspS9I	GGNCC	2 cut(s)	102, 426
AsuHPI	GGTGA	2 cut(s)	28, 140
AvaII	GGWCC	1 cut(s)	426
BaeGI	GKGCMC	1 cut(s)	84
BalI	TGGCCA	1 cut(s)	48
BanI	GGYRCC	2 cut(s)	79, 991
BanII	GRGCYC	1 cut(s)	221
Bbv12I	GWGCWC	2 cut(s)	170, 221
BbvI	GCAGC	1 cut(s)	521
BceAI	ACGGC	1 cut(s)	90
BciT130I	CCWGG	1 cut(s)	519
BciVI	GTATCC	1 cut(s)	340
BcoDI	GTCTC	3 cut(s)	229, 463, 558
BfrI	CTTAAG	1 cut(s)	547
BfuI	GTATCC	1 cut(s)	340
BglI	GCCNNNNNGGC	1 cut(s)	88
BisI	GCNGC	3 cut(s)	142, 176, 510
BlsI	GCNGC	3 cut(s)	143, 177, 511
Bme1390I	CCNGG	1 cut(s)	519
Bme18I	GGWCC	1 cut(s)	426
BmgBI	CACGTC	1 cut(s)	310
BmgT120I	GGNCC	2 cut(s)	102, 426
BmiI	GGNNCC	4 cut(s)	81, 103, 993, 999
BmrFI	CCNGG	1 cut(s)	519
BmrI	ACTGGG	1 cut(s)	283
BmsI	GCATC	6 cut(s)	223, 435, 483, 612, 871, 962
BmuI	ACTGGG	1 cut(s)	283
BpmI	CTGGAG	2 cut(s)	788, 886
Bpu10I	CCTNAGC	1 cut(s)	890
Bsa29I	ATCGAT	3 cut(s)	368, 372, 813
BsaI	GGTCTC	1 cut(s)	558
BsaJI	CCNNGG	3 cut(s)	72, 341, 517
BsaWI	WCCGGW	1 cut(s)	358
BsaXI	ACNNNNNCTCC	2 cut(s)	522, 552
Bsc4I	CCNNNNNNNGG	1 cut(s)	98
Bse118I	RCCGGY	1 cut(s)	994
Bse1I	ACTGG	5 cut(s)	155, 278, 681, 747, 869
Bse3DI	GCAATG	1 cut(s)	495
BseBI	CCWGG	1 cut(s)	519
BseCI	ATCGAT	3 cut(s)	368, 372, 813
BseDI	CCNNGG	3 cut(s)	72, 341, 517
BseGI	GGATG	3 cut(s)	165, 450, 627
BseLI	CCNNNNNNNGG	1 cut(s)	98
BseMI	GCAATG	1 cut(s)	495
BseMII	CTCAG	2 cut(s)	234, 368
BseNI	ACTGG	5 cut(s)	155, 278, 681, 747, 869
BseRI	GAGGAG	3 cut(s)	212, 785, 788
BseSI	GKGCMC	1 cut(s)	84
BseXI	GCAGC	1 cut(s)	521
BsgI	GTGCAG	2 cut(s)	527, 710
Bsh1236I	CGCG	1 cut(s)	14
Bsh1285I	CGRYCG	1 cut(s)	372
BshFI	GGCC	4 cut(s)	48, 91, 104, 289
BshNI	GGYRCC	2 cut(s)	79, 991
BshVI	ATCGAT	3 cut(s)	368, 372, 813
BsiEI	CGRYCG	1 cut(s)	372
BsiHKAI	GWGCWC	2 cut(s)	170, 221
BsiSI	CCGG	2 cut(s)	359, 995
BslFI	GGGAC	1 cut(s)	500
BslI	CCNNNNNNNGG	1 cut(s)	98
BsmAI	GTCTC	3 cut(s)	229, 463, 558
BsmBI	CGTCTC	1 cut(s)	463
BsmFI	GGGAC	1 cut(s)	500
BsmI	GAATGC	1 cut(s)	115
BsnI	GGCC	4 cut(s)	48, 91, 104, 289
Bso31I	GGTCTC	1 cut(s)	558
Bsp1286I	GDGCHC	3 cut(s)	84, 170, 221
Bsp1407I	TGTACA	2 cut(s)	649, 835
Bsp143I	GATC	4 cut(s)	9, 294, 369, 373
Bsp19I	CCATGG	1 cut(s)	341
BspACI	CCGC	7 cut(s)	14, 33, 77, 141, 176, 559, 576
BspANI	GGCC	4 cut(s)	48, 91, 104, 289
BspCNI	CTCAG	2 cut(s)	233, 369
BspDI	ATCGAT	3 cut(s)	368, 372, 813
BspFNI	CGCG	1 cut(s)	14
BspHI	TCATGA	1 cut(s)	630
BspLI	GGNNCC	4 cut(s)	81, 103, 993, 999
BspPI	GGATC	1 cut(s)	17
BspT107I	GGYRCC	2 cut(s)	79, 991
BspTI	CTTAAG	1 cut(s)	547
BspTNI	GGTCTC	1 cut(s)	558
BsrBI	CCGCTC	1 cut(s)	576
BsrDI	GCAATG	1 cut(s)	495
BsrFI	RCCGGY	1 cut(s)	994
BsrGI	TGTACA	2 cut(s)	649, 835
BsrI	ACTGG	5 cut(s)	155, 278, 681, 747, 869
BssAI	RCCGGY	1 cut(s)	994
BssECI	CCNNGG	3 cut(s)	72, 341, 517
BssMI	GATC	4 cut(s)	9, 294, 369, 373
BssT1I	CCWWGG	1 cut(s)	341
Bst2UI	CCWGG	1 cut(s)	519
Bst4CI	ACNGT	6 cut(s)	172, 193, 430, 474, 505, 907
Bst6I	CTCTTC	1 cut(s)	597
BstAFI	CTTAAG	1 cut(s)	547
BstAPI	GCANNNNNTGC	1 cut(s)	391
BstAUI	TGTACA	2 cut(s)	649, 835
BstC8I	GCNNGC	1 cut(s)	383
BstDEI	CTNAG	3 cut(s)	220, 377, 890
BstDSI	CCRYGG	2 cut(s)	72, 341
BstEII	GGTNACC	1 cut(s)	128
BstF5I	GGATG	3 cut(s)	165, 450, 627
BstFNI	CGCG	1 cut(s)	14
BstHHI	GCGC	2 cut(s)	42, 748
BstKTI	GATC	4 cut(s)	12, 297, 372, 376
BstMAI	GTCTC	3 cut(s)	229, 463, 558
BstMBI	GATC	4 cut(s)	9, 294, 369, 373
BstMCI	CGRYCG	1 cut(s)	372
BstMWI	GCNNNNNNNGC	5 cut(s)	39, 54, 88, 391, 923
BstNI	CCWGG	1 cut(s)	519
BstPI	GGTNACC	1 cut(s)	128
BstSCI	CCNGG	1 cut(s)	517
BstSLI	GKGCMC	1 cut(s)	84
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	1 cut(s)	521
Bsu15I	ATCGAT	3 cut(s)	368, 372, 813
BsuI	GTATCC	1 cut(s)	340
BsuRI	GGCC	4 cut(s)	48, 91, 104, 289
BsuTUI	ATCGAT	3 cut(s)	368, 372, 813
BtgI	CCRYGG	2 cut(s)	72, 341
BtrI	CACGTC	1 cut(s)	310
BtsCI	GGATG	3 cut(s)	165, 450, 627
BtsI	GCAGTG	1 cut(s)	49
BtsIMutI	CAGTG	3 cut(s)	49, 177, 1012
Cac8I	GCNNGC	1 cut(s)	383
CciI	TCATGA	1 cut(s)	630
CfoI	GCGC	2 cut(s)	42, 748
Cfr10I	RCCGGY	1 cut(s)	994
Cfr13I	GGNCC	2 cut(s)	102, 426
ClaI	ATCGAT	3 cut(s)	368, 372, 813
Csp6I	GTAC	4 cut(s)	539, 650, 664, 836
CviAII	CATG	5 cut(s)	337, 342, 389, 631, 658
CviQI	GTAC	4 cut(s)	539, 650, 664, 836
DdeI	CTNAG	3 cut(s)	220, 377, 890
DpnI	GATC	4 cut(s)	11, 296, 371, 375
DpnII	GATC	4 cut(s)	9, 294, 369, 373
DraIII	CACNNNGTG	1 cut(s)	391
EaeI	YGGCCR	1 cut(s)	46
Eam1104I	CTCTTC	1 cut(s)	597
EarI	CTCTTC	1 cut(s)	597
Ecl136II	GAGCTC	1 cut(s)	219
Eco130I	CCWWGG	1 cut(s)	341
Eco24I	GRGCYC	1 cut(s)	221
Eco31I	GGTCTC	1 cut(s)	558
Eco32I	GATATC	1 cut(s)	811
Eco47I	GGWCC	1 cut(s)	426
Eco53kI	GAGCTC	1 cut(s)	219
Eco57I	CTGAAG	1 cut(s)	143
Eco91I	GGTNACC	1 cut(s)	128
EcoICRI	GAGCTC	1 cut(s)	219
EcoO65I	GGTNACC	1 cut(s)	128
EcoRII	CCWGG	1 cut(s)	517
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	1 cut(s)	341
EcoT22I	ATGCAT	1 cut(s)	955
EcoT38I	GRGCYC	1 cut(s)	221
ErhI	CCWWGG	1 cut(s)	341
Esp3I	CGTCTC	1 cut(s)	463
FaeI	CATG	5 cut(s)	340, 345, 392, 634, 661
FaqI	GGGAC	1 cut(s)	500
FatI	CATG	5 cut(s)	336, 341, 388, 630, 657
Fnu4HI	GCNGC	3 cut(s)	142, 176, 510
FokI	GGATG	3 cut(s)	172, 457, 634
FriOI	GRGCYC	1 cut(s)	221
Fsp4HI	GCNGC	3 cut(s)	142, 176, 510
FspI	TGCGCA	1 cut(s)	41
GlaI	GCGC	2 cut(s)	41, 747
GluI	GCNGC	3 cut(s)	142, 176, 510
GsuI	CTGGAG	2 cut(s)	788, 886
HaeIII	GGCC	4 cut(s)	48, 91, 104, 289
HapII	CCGG	2 cut(s)	359, 995
HhaI	GCGC	2 cut(s)	42, 748
Hin1II	CATG	5 cut(s)	340, 345, 392, 634, 661
Hin6I	GCGC	2 cut(s)	40, 746
HinP1I	GCGC	2 cut(s)	40, 746
HincII	GTYRAC	1 cut(s)	943
HindII	GTYRAC	1 cut(s)	943
HinfI	GANTC	1 cut(s)	910
HpaII	CCGG	2 cut(s)	359, 995
HphI	GGTGA	2 cut(s)	28, 140
Hpy166II	GTNNAC	2 cut(s)	321, 943
Hpy188I	TCNGA	6 cut(s)	229, 268, 378, 444, 958, 1006
Hpy188III	TCNNGA	3 cut(s)	631, 767, 935
Hpy8I	GTNNAC	2 cut(s)	321, 943
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	3 cut(s)	118, 721, 799
HpyCH4III	ACNGT	6 cut(s)	172, 193, 430, 474, 505, 907
HpyCH4IV	ACGT	2 cut(s)	309, 401
HpyCH4V	TGCA	8 cut(s)	57, 115, 488, 544, 625, 691, 848, 953
HpyF10VI	GCNNNNNNNGC	5 cut(s)	39, 54, 88, 391, 923
HpyF3I	CTNAG	3 cut(s)	220, 377, 890
HpySE526I	ACGT	2 cut(s)	309, 401
Hsp92II	CATG	5 cut(s)	340, 345, 392, 634, 661
HspAI	GCGC	2 cut(s)	40, 746
Kzo9I	GATC	4 cut(s)	9, 294, 369, 373
LmnI	GCTCC	2 cut(s)	847, 1003
Lsp1109I	GCAGC	1 cut(s)	521
LweI	GCATC	6 cut(s)	223, 435, 483, 612, 871, 962
MaeII	ACGT	2 cut(s)	309, 401
MaeIII	GTNAC	1 cut(s)	128
MalI	GATC	4 cut(s)	11, 296, 371, 375
MbiI	CCGCTC	1 cut(s)	576
MboI	GATC	4 cut(s)	9, 294, 369, 373
MboII	GAAGA	5 cut(s)	250, 304, 431, 614, 694
MhlI	GDGCHC	3 cut(s)	84, 170, 221
MlsI	TGGCCA	1 cut(s)	48
MluCI	AATT	3 cut(s)	328, 965, 980
MluNI	TGGCCA	1 cut(s)	48
MmeI	TCCRAC	1 cut(s)	252
Mox20I	TGGCCA	1 cut(s)	48
Mph1103I	ATGCAT	1 cut(s)	955
MroXI	GAANNNNTTC	1 cut(s)	332
MscI	TGGCCA	1 cut(s)	48
MseI	TTAA	2 cut(s)	465, 548
MslI	CAYNNNNRTG	3 cut(s)	77, 635, 936
Msp20I	TGGCCA	1 cut(s)	48
MspA1I	CMGCKG	1 cut(s)	512
MspCI	CTTAAG	1 cut(s)	547
MspI	CCGG	2 cut(s)	359, 995
MspR9I	CCNGG	1 cut(s)	519
Mva1269I	GAATGC	1 cut(s)	115
MvaI	CCWGG	1 cut(s)	519
MvnI	CGCG	1 cut(s)	14
MwoI	GCNNNNNNNGC	5 cut(s)	39, 54, 88, 391, 923
NcoI	CCATGG	1 cut(s)	341
NdeII	GATC	4 cut(s)	9, 294, 369, 373
NlaIII	CATG	5 cut(s)	340, 345, 392, 634, 661
NlaIV	GGNNCC	4 cut(s)	81, 103, 993, 999
NmeAIII	GCCGAG	1 cut(s)	130
NmuCI	GTSAC	1 cut(s)	128
NsbI	TGCGCA	1 cut(s)	41
NsiI	ATGCAT	1 cut(s)	955
OliI	CACNNNNGTG	1 cut(s)	77
PagI	TCATGA	1 cut(s)	630
PctI	GAATGC	1 cut(s)	115
PdmI	GAANNNNTTC	1 cut(s)	332
PfeI	GAWTC	1 cut(s)	910
PkrI	GCNGC	3 cut(s)	143, 177, 511
Ple19I	CGATCG	1 cut(s)	372
PsiI	TTATAA	1 cut(s)	354
Psp124BI	GAGCTC	1 cut(s)	221
Psp6I	CCWGG	1 cut(s)	517
PspEI	GGTNACC	1 cut(s)	128
PspGI	CCWGG	1 cut(s)	517
PspN4I	GGNNCC	4 cut(s)	81, 103, 993, 999
PspPI	GGNCC	2 cut(s)	102, 426
PvuI	CGATCG	1 cut(s)	372
PvuII	CAGCTG	1 cut(s)	512
RsaI	GTAC	4 cut(s)	540, 651, 665, 837
RsaNI	GTAC	4 cut(s)	539, 650, 664, 836
RseI	CAYNNNNRTG	3 cut(s)	77, 635, 936
SacI	GAGCTC	1 cut(s)	221
SaqAI	TTAA	2 cut(s)	465, 548
SatI	GCNGC	3 cut(s)	142, 176, 510
Sau3AI	GATC	4 cut(s)	9, 294, 369, 373
Sau96I	GGNCC	2 cut(s)	102, 426
ScrFI	CCNGG	1 cut(s)	519
SduI	GDGCHC	3 cut(s)	84, 170, 221
SfaNI	GCATC	6 cut(s)	223, 435, 483, 612, 871, 962
SinI	GGWCC	1 cut(s)	426
SmiMI	CAYNNNNRTG	3 cut(s)	77, 635, 936
SmlI	CTYRAG	1 cut(s)	547
SmoI	CTYRAG	1 cut(s)	547
Sse9I	AATT	3 cut(s)	328, 965, 980
SsiI	CCGC	7 cut(s)	14, 33, 77, 141, 176, 559, 576
SstI	GAGCTC	1 cut(s)	221
StyD4I	CCNGG	1 cut(s)	517
StyI	CCWWGG	1 cut(s)	341
TaaI	ACNGT	6 cut(s)	172, 193, 430, 474, 505, 907
TaiI	ACGT	2 cut(s)	312, 404
TaqI	TCGA	5 cut(s)	368, 372, 813, 858, 934
TasI	AATT	3 cut(s)	328, 965, 980
TatI	WGTACW	2 cut(s)	649, 835
TauI	GCSGC	2 cut(s)	144, 178
TfiI	GAWTC	1 cut(s)	910
Tru1I	TTAA	2 cut(s)	465, 548
Tru9I	TTAA	2 cut(s)	465, 548
TscAI	CASTG	2 cut(s)	49, 177
TseFI	GTSAC	1 cut(s)	128
TseI	GCWGC	1 cut(s)	509
Tsp45I	GTSAC	1 cut(s)	128
TspDTI	ATGAA	3 cut(s)	17, 325, 936
TspRI	CASTG	2 cut(s)	49, 177
Vha464I	CTTAAG	1 cut(s)	547
VpaK11BI	GGWCC	1 cut(s)	426
XcmI	CCANNNNNNNNNTGG	1 cut(s)	575
XmnI	GAANNNNTTC	1 cut(s)	332
Zsp2I	ATGCAT	1 cut(s)	955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.