Prupe.1G061900_v2.0.a1

Belongs to the alternative oxidase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
4381065 .. 4384158
3094 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G061900.2

Sequence Viewer

Length: 1011 bp
ATGAACAGGGTCGTGTTGAAGTCGGTGATCGGAGGTCTCGCTAATGGCCAGAACTTCAATCGCTACATTTCGACGGCTGTGGCGGTGAGGCCGTTGGAGAGCTCGGAGTTTCTGAGACGGAGGAGCGACAGCGTTTTGGGCGCGTTTCAGTGGAGGACTAGGATGATGATGAGTACGGGGTCGACTGGCGAAACGACGCCTTTTGCGGAGAAGGAACAGAAGAAGGAGAGCTCGAACGACAATCGTAGCGTTGTCATTTCCAGTTACTGGGGGATTCAGAGGCCCAAGATTAAAAGGGAGGACGGGACAGAGTGGCCATGGAATTGCTTCAAGCCATGGGAGACTTATGAAGCGGATTTGTCGATCGATCTGAGCAAGCACCATGTGCCGAAGACGTTTCTGGACAAAACGGCGTTCAGGACTGTCAAGTCTCTTCGAGTTCTTTCGGATCTTTACTTTCAGAAGCGGCATGGGTGCCATGCAATGATGCTGGAAACTGTGGCAGCTGTCCCCGGAATGGTGGGAGGCATGATGCTGCATTTGAAGTCTCTCCGTAAATTCGAGCACAGCGGTGGCTGGATCAAAGCTTTACTTGAAGAGGCAGAGAATGAGAGGATGCACCTGATGACGGTGGTGGAACTTGTGAAGCCCGCATGGCACGAGAGGCTTCTGGTTCTCGCCGTGCAGGGAGTGTTCTTCAATGCCTTCTTTGTGCTTTATGCGCTTTCCCCCAAAGTGGCTCATAGGGTTGTTGGGTATCTGGAGGAGGAAGCTGTGCACTCGTACACAGAGTACTTGAAGGATATTGAAAATGGCAAAATTGAAAATGTGAAGGCTCCTGCAATCGCAATTGACTACTGGAGGCTGCCTAAGGATGCCACACTTCACGATGTTATCACTGTGATTCGGGCGGATGAAGCTCACCATCGCGATGTCAACCATTTTGCATCTGATATTCATTTTCAGGGGAAGGAGTTAAGAGAAGCACCAGCTCCCCTGGGTTATCACTAA

Protein Analysis

337

Amino Acids

38.46

Weight (kDa)

8.66

Isoelectric Point (pI)

36.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 427
AccB1I GGYRCC 1 cut(s) 474
AccB7I CCANNNNNTGG 1 cut(s) 267
AccI GTMKAC 1 cut(s) 182
AccII CGCG 2 cut(s) 143, 930
AciI CCGC 7 cut(s) 83, 206, 353, 466, 570, 651, 911
AclWI GGATC 2 cut(s) 456, 587
AcoI YGGCCR 2 cut(s) 46, 314
AcsI RAATTY 1 cut(s) 557
AcyI GRCGYC 1 cut(s) 197
AdeI CACNNNGTG 1 cut(s) 385
AfaI GTAC 3 cut(s) 175, 785, 794
AfiI CCNNNNNNNGG 4 cut(s) 267, 517, 628, 736
AgsI TTSAA 9 cut(s) 19, 58, 331, 544, 596, 700, 799, 809, 824
AjnI CCWGG 1 cut(s) 996
AleI CACNNNNGTG 1 cut(s) 570
AluBI AGCT 7 cut(s) 102, 231, 506, 587, 773, 920, 992
AluI AGCT 7 cut(s) 102, 231, 506, 587, 773, 920, 992
Alw21I GWGCWC 4 cut(s) 104, 233, 567, 780
Alw26I GTCTC 5 cut(s) 41, 109, 335, 435, 552
Alw44I GTGCAC 1 cut(s) 776
AlwI GGATC 2 cut(s) 456, 587
AlwNI CAGNNNCTG 1 cut(s) 267
AoxI GGCC 4 cut(s) 46, 89, 281, 314
ApaLI GTGCAC 1 cut(s) 776
ApeKI GCWGC 3 cut(s) 503, 535, 865
ApoI RAATTY 1 cut(s) 557
Asp700I GAANNNNTTC 1 cut(s) 326
AspLEI GCGC 2 cut(s) 143, 724
AspS9I GGNCC 1 cut(s) 282
AsuC2I CCSGG 1 cut(s) 513
AsuHPI GGTGA 3 cut(s) 37, 97, 914
AxyI CCTNAGG 1 cut(s) 870
BaeGI GKGCMC 1 cut(s) 780
BalI TGGCCA 2 cut(s) 48, 316
BanI GGYRCC 1 cut(s) 474
BanII GRGCYC 2 cut(s) 104, 233
BauI CACGAG 1 cut(s) 659
BbsI GAAGAC 1 cut(s) 398
Bbv12I GWGCWC 4 cut(s) 104, 233, 567, 780
BbvI GCAGC 3 cut(s) 515, 522, 852
BccI CCATC 1 cut(s) 933
BceAI ACGGC 4 cut(s) 76, 90, 426, 665
BciT130I CCWGG 1 cut(s) 998
BcnI CCSGG 1 cut(s) 513
BcoDI GTCTC 5 cut(s) 41, 109, 335, 435, 552
BfaI CTAG 1 cut(s) 159
BglI GCCNNNNNGGC 1 cut(s) 655
BisI GCNGC 4 cut(s) 467, 504, 536, 866
BlsI GCNGC 4 cut(s) 468, 505, 537, 867
BmcAI AGTACT 1 cut(s) 794
Bme1390I CCNGG 2 cut(s) 513, 998
BmgT120I GGNCC 1 cut(s) 282
BmiI GGNNCC 2 cut(s) 476, 837
BmrFI CCNGG 2 cut(s) 513, 998
BmrI ACTGGG 1 cut(s) 277
BmsI GCATC 5 cut(s) 477, 522, 606, 865, 956
BmuI ACTGGG 1 cut(s) 277
BpiI GAAGAC 1 cut(s) 398
BpmI CTGGAG 2 cut(s) 782, 880
BpuMI CCSGG 1 cut(s) 513
Bsa29I ATCGAT 1 cut(s) 366
BsaHI GRCGYC 1 cut(s) 197
BsaI GGTCTC 1 cut(s) 41
BsaJI CCNNGG 5 cut(s) 317, 335, 511, 996, 997
Bsc4I CCNNNNNNNGG 4 cut(s) 267, 517, 628, 736
Bse1I ACTGG 4 cut(s) 190, 261, 272, 863
Bse21I CCTNAGG 1 cut(s) 870
Bse3DI GCAATG 1 cut(s) 489
BseBI CCWGG 1 cut(s) 998
BseCI ATCGAT 1 cut(s) 366
BseDI CCNNGG 5 cut(s) 317, 335, 511, 996, 997
BseGI GGATG 4 cut(s) 168, 621, 880, 919
BseLI CCNNNNNNNGG 4 cut(s) 267, 517, 628, 736
BseMI GCAATG 1 cut(s) 489
BseMII CTCAG 2 cut(s) 104, 362
BseNI ACTGG 4 cut(s) 190, 261, 272, 863
BseRI GAGGAG 2 cut(s) 136, 779
BseSI GKGCMC 1 cut(s) 780
BseXI GCAGC 3 cut(s) 515, 522, 852
BsgI GTGCAG 1 cut(s) 704
Bsh1236I CGCG 2 cut(s) 143, 930
Bsh1285I CGRYCG 1 cut(s) 366
BshFI GGCC 4 cut(s) 48, 91, 283, 316
BshNI GGYRCC 1 cut(s) 474
BshVI ATCGAT 1 cut(s) 366
BsiEI CGRYCG 1 cut(s) 366
BsiHKAI GWGCWC 4 cut(s) 104, 233, 567, 780
BsiSI CCGG 1 cut(s) 513
BslFI GGGAC 2 cut(s) 319, 494
BslI CCNNNNNNNGG 4 cut(s) 267, 517, 628, 736
BsmAI GTCTC 5 cut(s) 41, 109, 335, 435, 552
BsmBI CGTCTC 1 cut(s) 109
BsmFI GGGAC 2 cut(s) 319, 494
BsnI GGCC 4 cut(s) 48, 91, 283, 316
Bso31I GGTCTC 1 cut(s) 41
Bsp1286I GDGCHC 4 cut(s) 104, 233, 567, 780
Bsp143I GATC 5 cut(s) 27, 363, 367, 448, 579
Bsp19I CCATGG 2 cut(s) 317, 335
Bsp68I TCGCGA 1 cut(s) 930
BspACI CCGC 7 cut(s) 83, 206, 353, 466, 570, 651, 911
BspANI GGCC 4 cut(s) 48, 91, 283, 316
BspCNI CTCAG 2 cut(s) 105, 363
BspDI ATCGAT 1 cut(s) 366
BspFNI CGCG 2 cut(s) 143, 930
BspLI GGNNCC 2 cut(s) 476, 837
BspPI GGATC 2 cut(s) 456, 587
BspT107I GGYRCC 1 cut(s) 474
BspTNI GGTCTC 1 cut(s) 41
BsrDI GCAATG 1 cut(s) 489
BsrI ACTGG 4 cut(s) 190, 261, 272, 863
BssECI CCNNGG 5 cut(s) 317, 335, 511, 996, 997
BssMI GATC 5 cut(s) 27, 363, 367, 448, 579
BssNI GRCGYC 1 cut(s) 197
BssSI CACGAG 1 cut(s) 659
BssT1I CCWWGG 2 cut(s) 317, 335
Bst2BI CACGAG 1 cut(s) 659
Bst2UI CCWGG 1 cut(s) 998
Bst4CI ACNGT 4 cut(s) 424, 499, 631, 901
Bst6I CTCTTC 2 cut(s) 438, 591
BstACI GRCGYC 1 cut(s) 197
BstAPI GCANNNNNTGC 1 cut(s) 385
BstC8I GCNNGC 2 cut(s) 377, 651
BstDEI CTNAG 3 cut(s) 113, 371, 870
BstDSI CCRYGG 2 cut(s) 317, 335
BstF5I GGATG 4 cut(s) 168, 621, 880, 919
BstFNI CGCG 2 cut(s) 143, 930
BstHHI GCGC 2 cut(s) 143, 724
BstKTI GATC 5 cut(s) 30, 366, 370, 451, 582
BstMAI GTCTC 5 cut(s) 41, 109, 335, 435, 552
BstMBI GATC 5 cut(s) 27, 363, 367, 448, 579
BstMCI CGRYCG 1 cut(s) 366
BstMWI GCNNNNNNNGC 6 cut(s) 138, 385, 655, 664, 721, 917
BstNI CCWGG 1 cut(s) 998
BstSCI CCNGG 2 cut(s) 511, 996
BstSLI GKGCMC 1 cut(s) 780
BstUI CGCG 2 cut(s) 143, 930
BstV1I GCAGC 3 cut(s) 515, 522, 852
BstV2I GAAGAC 1 cut(s) 398
BstX2I RGATCY 1 cut(s) 448
BstYI RGATCY 1 cut(s) 448
Bsu15I ATCGAT 1 cut(s) 366
Bsu36I CCTNAGG 1 cut(s) 870
BsuRI GGCC 4 cut(s) 48, 91, 283, 316
BsuTUI ATCGAT 1 cut(s) 366
BtgI CCRYGG 2 cut(s) 317, 335
BtgZI GCGATG 2 cut(s) 911, 945
BtsCI GGATG 4 cut(s) 168, 621, 880, 919
BtsIMutI CAGTG 2 cut(s) 155, 897
BtuMI TCGCGA 1 cut(s) 930
Cac8I GCNNGC 2 cut(s) 377, 651
CaiI CAGNNNCTG 1 cut(s) 267
CfoI GCGC 2 cut(s) 143, 724
Cfr13I GGNCC 1 cut(s) 282
ClaI ATCGAT 1 cut(s) 366
CseI GACGC 1 cut(s) 205
Csp6I GTAC 3 cut(s) 174, 784, 793
CviAII CATG 7 cut(s) 318, 336, 383, 470, 479, 529, 654
CviQI GTAC 3 cut(s) 174, 784, 793
DdeI CTNAG 3 cut(s) 113, 371, 870
DpnI GATC 5 cut(s) 29, 365, 369, 450, 581
DpnII GATC 5 cut(s) 27, 363, 367, 448, 579
DraIII CACNNNGTG 1 cut(s) 385
DrdI GACNNNNNNGTC 1 cut(s) 427
DseDI GACNNNNNNGTC 1 cut(s) 427
EaeI YGGCCR 2 cut(s) 46, 314
Eam1104I CTCTTC 2 cut(s) 438, 591
EarI CTCTTC 2 cut(s) 438, 591
EciI GGCGGA 1 cut(s) 926
Ecl136II GAGCTC 2 cut(s) 102, 231
Eco130I CCWWGG 2 cut(s) 317, 335
Eco24I GRGCYC 2 cut(s) 104, 233
Eco31I GGTCTC 1 cut(s) 41
Eco53kI GAGCTC 2 cut(s) 102, 231
Eco81I CCTNAGG 1 cut(s) 870
EcoICRI GAGCTC 2 cut(s) 102, 231
EcoRII CCWGG 1 cut(s) 996
EcoT14I CCWWGG 2 cut(s) 317, 335
EcoT38I GRGCYC 2 cut(s) 104, 233
ErhI CCWWGG 2 cut(s) 317, 335
Esp3I CGTCTC 1 cut(s) 109
FaeI CATG 7 cut(s) 321, 339, 386, 473, 482, 532, 657
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 2 cut(s) 319, 494
FatI CATG 7 cut(s) 317, 335, 382, 469, 478, 528, 653
FauI CCCGC 1 cut(s) 658
FblI GTMKAC 1 cut(s) 182
Fnu4HI GCNGC 4 cut(s) 467, 504, 536, 866
FokI GGATG 4 cut(s) 175, 628, 887, 926
FriOI GRGCYC 2 cut(s) 104, 233
Fsp4HI GCNGC 4 cut(s) 467, 504, 536, 866
FspBI CTAG 1 cut(s) 159
GlaI GCGC 2 cut(s) 142, 723
GluI GCNGC 4 cut(s) 467, 504, 536, 866
GsuI CTGGAG 2 cut(s) 782, 880
HaeIII GGCC 4 cut(s) 48, 91, 283, 316
HapII CCGG 1 cut(s) 513
HgaI GACGC 1 cut(s) 205
HhaI GCGC 2 cut(s) 143, 724
Hin1I GRCGYC 1 cut(s) 197
Hin1II CATG 7 cut(s) 321, 339, 386, 473, 482, 532, 657
Hin6I GCGC 2 cut(s) 141, 722
HinP1I GCGC 2 cut(s) 141, 722
HincII GTYRAC 2 cut(s) 183, 937
HindII GTYRAC 2 cut(s) 183, 937
HindIII AAGCTT 1 cut(s) 585
HinfI GANTC 2 cut(s) 274, 904
HpaII CCGG 1 cut(s) 513
HphI GGTGA 3 cut(s) 37, 97, 914
Hpy166II GTNNAC 4 cut(s) 183, 778, 786, 937
Hpy188I TCNGA 8 cut(s) 32, 106, 114, 279, 372, 448, 462, 952
Hpy188III TCNNGA 5 cut(s) 401, 418, 761, 887, 929
Hpy8I GTNNAC 4 cut(s) 183, 778, 786, 937
Hpy99I CGWCG 2 cut(s) 76, 199
HpyAV CCTTC 6 cut(s) 205, 217, 715, 793, 826, 964
HpyCH4III ACNGT 4 cut(s) 424, 499, 631, 901
HpyCH4IV ACGT 1 cut(s) 395
HpyCH4V TGCA 7 cut(s) 482, 538, 619, 685, 778, 842, 947
HpyF10VI GCNNNNNNNGC 6 cut(s) 138, 385, 655, 664, 721, 917
HpyF3I CTNAG 3 cut(s) 113, 371, 870
HpySE526I ACGT 1 cut(s) 395
Hsp92I GRCGYC 1 cut(s) 197
Hsp92II CATG 7 cut(s) 321, 339, 386, 473, 482, 532, 657
HspAI GCGC 2 cut(s) 141, 722
Kzo9I GATC 5 cut(s) 27, 363, 367, 448, 579
LmnI GCTCC 3 cut(s) 123, 841, 997
Lsp1109I GCAGC 3 cut(s) 515, 522, 852
LweI GCATC 5 cut(s) 477, 522, 606, 865, 956
MaeI CTAG 1 cut(s) 159
MaeII ACGT 1 cut(s) 395
MaeIII GTNAC 1 cut(s) 263
MalI GATC 5 cut(s) 29, 365, 369, 450, 581
MboI GATC 5 cut(s) 27, 363, 367, 448, 579
MboII GAAGA 5 cut(s) 232, 403, 425, 608, 688
MfeI CAATTG 1 cut(s) 849
MflI RGATCY 1 cut(s) 448
MhlI GDGCHC 4 cut(s) 104, 233, 567, 780
MlsI TGGCCA 2 cut(s) 48, 316
MluCI AATT 4 cut(s) 322, 557, 819, 849
MluNI TGGCCA 2 cut(s) 48, 316
MmeI TCCRAC 1 cut(s) 75
Mox20I TGGCCA 2 cut(s) 48, 316
MroXI GAANNNNTTC 1 cut(s) 326
MscI TGGCCA 2 cut(s) 48, 316
MseI TTAA 2 cut(s) 291, 977
MslI CAYNNNNRTG 2 cut(s) 570, 930
Msp20I TGGCCA 2 cut(s) 48, 316
MspA1I CMGCKG 2 cut(s) 506, 570
MspI CCGG 1 cut(s) 513
MspR9I CCNGG 2 cut(s) 513, 998
MunI CAATTG 1 cut(s) 849
MvaI CCWGG 1 cut(s) 998
MvnI CGCG 2 cut(s) 143, 930
MwoI GCNNNNNNNGC 6 cut(s) 138, 385, 655, 664, 721, 917
NciI CCSGG 1 cut(s) 513
NcoI CCATGG 2 cut(s) 317, 335
NdeII GATC 5 cut(s) 27, 363, 367, 448, 579
NlaIII CATG 7 cut(s) 321, 339, 386, 473, 482, 532, 657
NlaIV GGNNCC 2 cut(s) 476, 837
NruI TCGCGA 1 cut(s) 930
OliI CACNNNNGTG 1 cut(s) 570
PasI CCCWGGG 1 cut(s) 997
PdmI GAANNNNTTC 1 cut(s) 326
PfeI GAWTC 2 cut(s) 274, 904
PflMI CCANNNNNTGG 1 cut(s) 267
PkrI GCNGC 4 cut(s) 468, 505, 537, 867
Ple19I CGATCG 1 cut(s) 366
Psp124BI GAGCTC 2 cut(s) 104, 233
Psp6I CCWGG 1 cut(s) 996
PspGI CCWGG 1 cut(s) 996
PspN4I GGNNCC 2 cut(s) 476, 837
PspPI GGNCC 1 cut(s) 282
PstNI CAGNNNCTG 1 cut(s) 267
PsuI RGATCY 1 cut(s) 448
PvuI CGATCG 1 cut(s) 366
PvuII CAGCTG 1 cut(s) 506
RruI TCGCGA 1 cut(s) 930
RsaI GTAC 3 cut(s) 175, 785, 794
RsaNI GTAC 3 cut(s) 174, 784, 793
RseI CAYNNNNRTG 2 cut(s) 570, 930
SacI GAGCTC 2 cut(s) 104, 233
SalI GTCGAC 1 cut(s) 181
SaqAI TTAA 2 cut(s) 291, 977
SatI GCNGC 4 cut(s) 467, 504, 536, 866
Sau3AI GATC 5 cut(s) 27, 363, 367, 448, 579
Sau96I GGNCC 1 cut(s) 282
ScaI AGTACT 1 cut(s) 794
ScrFI CCNGG 2 cut(s) 513, 998
SduI GDGCHC 4 cut(s) 104, 233, 567, 780
SfaNI GCATC 5 cut(s) 477, 522, 606, 865, 956
SmiMI CAYNNNNRTG 2 cut(s) 570, 930
Sse9I AATT 4 cut(s) 322, 557, 819, 849
SsiI CCGC 7 cut(s) 83, 206, 353, 466, 570, 651, 911
SspMI CTAG 1 cut(s) 159
SstI GAGCTC 2 cut(s) 104, 233
StyD4I CCNGG 2 cut(s) 511, 996
StyI CCWWGG 2 cut(s) 317, 335
TaaI ACNGT 4 cut(s) 424, 499, 631, 901
TaiI ACGT 1 cut(s) 398
TaqI TCGA 7 cut(s) 71, 182, 233, 362, 366, 436, 561
TasI AATT 4 cut(s) 322, 557, 819, 849
TatI WGTACW 1 cut(s) 792
TauI GCSGC 1 cut(s) 469
TfiI GAWTC 2 cut(s) 274, 904
Tru1I TTAA 2 cut(s) 291, 977
Tru9I TTAA 2 cut(s) 291, 977
TscAI CASTG 2 cut(s) 155, 904
TseI GCWGC 3 cut(s) 503, 535, 865
TspDTI ATGAA 4 cut(s) 17, 363, 930, 947
TspGWI ACGGA 2 cut(s) 133, 542
TspRI CASTG 2 cut(s) 155, 904
Van91I CCANNNNNTGG 1 cut(s) 267
VneI GTGCAC 1 cut(s) 776
XapI RAATTY 1 cut(s) 557
XmiI GTMKAC 1 cut(s) 182
XmnI GAANNNNTTC 1 cut(s) 326
XspI CTAG 1 cut(s) 159
ZrmI AGTACT 1 cut(s) 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.