Belongs to the alternative oxidase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64210 |
| fragaria_vesca | FvH4_4g05920 FvH4_4g05930 |
| malus_domestica | MD13G1231500.v1.1 MD16G1236400.v1.1 |
| prunus_persica | Prupe.1G061400_v2.0.a1 Prupe.1G061800_v2.0.a1 Prupe.1G061800_v2.0.a1 Prupe.1G061900_v2.0.a1 Prupe.1G061900_v2.0.a1 |
| pyrus_communis | pycom16g19830 |
| rosa_chinensis | RchiOBHm_Chr4g0397091 RchiOBHm_Chr4g0397111 |
| rosa_laevigata | RLG00000009450 |
| rosa_multiflora | Rmu_sc0002312.1_g000026 Rmu_sc0002312.1_g000031 Rmu_sc0007785.1_g000028 Rmu_sc0007785.1_g000034 |
| rosa_roxburghii | Rroxscaffold_5G00342060 Rroxscaffold_5G00342080 |
| rosa_rugosa | Rorug03G0344700 Rorug03G0344800 |
| rosa_samantha | Rh4AG077300 Rh4BG072900 Rh4CG082500 Rh4DG070400 Rh4DG070500 |
| rosa_wichuraiana | Rw0G015790 Rw0G015800 Rw4G006240 Rw4G006250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 480 |
| AccII | CGCG | 1 cut(s) | 14 |
| AciI | CCGC | 9 cut(s) | 14, 61, 105, 121, 135, 197, 200, 209, 234 |
| AclWI | GGATC | 2 cut(s) | 17, 593 |
| AcoI | YGGCCR | 3 cut(s) | 27, 46, 320 |
| AcsI | RAATTY | 1 cut(s) | 444 |
| AcyI | GRCGYC | 3 cut(s) | 179, 243, 255 |
| AdeI | CACNNNGTG | 1 cut(s) | 391 |
| AfaI | GTAC | 4 cut(s) | 422, 665, 800, 837 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 13, 523 |
| AflII | CTTAAG | 2 cut(s) | 547, 890 |
| AgsI | TTSAA | 5 cut(s) | 58, 602, 706, 805, 830 |
| AjnI | CCWGG | 2 cut(s) | 517, 675 |
| AluBI | AGCT | 9 cut(s) | 35, 171, 231, 436, 512, 742, 842, 926, 998 |
| AluI | AGCT | 9 cut(s) | 35, 171, 231, 436, 512, 742, 842, 926, 998 |
| Alw21I | GWGCWC | 3 cut(s) | 37, 173, 233 |
| Alw26I | GTCTC | 3 cut(s) | 341, 463, 558 |
| AlwI | GGATC | 2 cut(s) | 17, 593 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 845 |
| AoxI | GGCC | 5 cut(s) | 27, 46, 287, 320, 777 |
| ApeKI | GCWGC | 5 cut(s) | 86, 509, 538, 541, 871 |
| ApoI | RAATTY | 1 cut(s) | 444 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 332 |
| AspLEI | GCGC | 1 cut(s) | 42 |
| AspS9I | GGNCC | 1 cut(s) | 217 |
| AsuC2I | CCSGG | 1 cut(s) | 752 |
| AsuHPI | GGTGA | 2 cut(s) | 187, 920 |
| AsuII | TTCGAA | 1 cut(s) | 442 |
| AvaII | GGWCC | 1 cut(s) | 217 |
| BalI | TGGCCA | 1 cut(s) | 322 |
| BanI | GGYRCC | 1 cut(s) | 480 |
| BanII | GRGCYC | 3 cut(s) | 37, 173, 233 |
| BbsI | GAAGAC | 3 cut(s) | 404, 451, 691 |
| Bbv12I | GWGCWC | 3 cut(s) | 37, 173, 233 |
| BbvI | GCAGC | 5 cut(s) | 73, 521, 525, 528, 858 |
| BccI | CCATC | 1 cut(s) | 190 |
| BceAI | ACGGC | 3 cut(s) | 242, 325, 468 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 348, 382 |
| BciT130I | CCWGG | 2 cut(s) | 519, 677 |
| BcnI | CCSGG | 1 cut(s) | 752 |
| BcoDI | GTCTC | 3 cut(s) | 341, 463, 558 |
| BfaI | CTAG | 1 cut(s) | 767 |
| BfmI | CTRYAG | 1 cut(s) | 849 |
| BfrI | CTTAAG | 2 cut(s) | 547, 890 |
| BisI | GCNGC | 8 cut(s) | 15, 87, 197, 200, 510, 539, 542, 872 |
| BlsI | GCNGC | 8 cut(s) | 16, 88, 198, 201, 511, 540, 543, 873 |
| BmcAI | AGTACT | 1 cut(s) | 800 |
| Bme1390I | CCNGG | 3 cut(s) | 519, 677, 752 |
| Bme18I | GGWCC | 1 cut(s) | 217 |
| BmgT120I | GGNCC | 1 cut(s) | 217 |
| BmiI | GGNNCC | 2 cut(s) | 482, 674 |
| BmrFI | CCNGG | 3 cut(s) | 519, 677, 752 |
| BmsI | GCATC | 4 cut(s) | 483, 612, 871, 962 |
| BoxI | GACNNNNGTC | 1 cut(s) | 455 |
| BpiI | GAAGAC | 3 cut(s) | 404, 451, 691 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 296, 328 |
| BpmI | CTGGAG | 2 cut(s) | 139, 886 |
| Bpu14I | TTCGAA | 1 cut(s) | 442 |
| BpuMI | CCSGG | 1 cut(s) | 752 |
| Bsa29I | ATCGAT | 2 cut(s) | 368, 372 |
| BsaHI | GRCGYC | 3 cut(s) | 179, 243, 255 |
| BsaI | GGTCTC | 1 cut(s) | 558 |
| BsaJI | CCNNGG | 4 cut(s) | 43, 323, 341, 517 |
| BsaWI | WCCGGW | 1 cut(s) | 6 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 13, 523 |
| Bse118I | RCCGGY | 1 cut(s) | 79 |
| Bse1I | ACTGG | 1 cut(s) | 869 |
| Bse3DI | GCAATG | 1 cut(s) | 495 |
| BseBI | CCWGG | 2 cut(s) | 519, 677 |
| BseCI | ATCGAT | 2 cut(s) | 368, 372 |
| BseDI | CCNNGG | 4 cut(s) | 43, 323, 341, 517 |
| BseGI | GGATG | 5 cut(s) | 168, 182, 627, 901, 943 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 13, 523 |
| BseMI | GCAATG | 1 cut(s) | 495 |
| BseMII | CTCAG | 3 cut(s) | 306, 368, 571 |
| BseNI | ACTGG | 1 cut(s) | 869 |
| BseRI | GAGGAG | 1 cut(s) | 788 |
| BseXI | GCAGC | 5 cut(s) | 73, 521, 525, 528, 858 |
| BseYI | CCCAGC | 1 cut(s) | 994 |
| BsgI | GTGCAG | 3 cut(s) | 527, 710, 936 |
| Bsh1236I | CGCG | 1 cut(s) | 14 |
| Bsh1285I | CGRYCG | 2 cut(s) | 84, 372 |
| BshFI | GGCC | 5 cut(s) | 29, 48, 289, 322, 779 |
| BshNI | GGYRCC | 1 cut(s) | 480 |
| BshVI | ATCGAT | 2 cut(s) | 368, 372 |
| BsiEI | CGRYCG | 2 cut(s) | 84, 372 |
| BsiHKAI | GWGCWC | 3 cut(s) | 37, 173, 233 |
| BsiSI | CCGG | 6 cut(s) | 7, 30, 49, 80, 206, 751 |
| BslFI | GGGAC | 1 cut(s) | 500 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 13, 523 |
| BsmAI | GTCTC | 3 cut(s) | 341, 463, 558 |
| BsmBI | CGTCTC | 1 cut(s) | 463 |
| BsmFI | GGGAC | 1 cut(s) | 500 |
| BsmI | GAATGC | 1 cut(s) | 540 |
| BsnI | GGCC | 5 cut(s) | 29, 48, 289, 322, 779 |
| Bso31I | GGTCTC | 1 cut(s) | 558 |
| Bsp119I | TTCGAA | 1 cut(s) | 442 |
| Bsp1286I | GDGCHC | 3 cut(s) | 37, 173, 233 |
| Bsp143I | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| Bsp19I | CCATGG | 3 cut(s) | 43, 323, 341 |
| BspACI | CCGC | 9 cut(s) | 14, 61, 105, 121, 135, 197, 200, 209, 234 |
| BspANI | GGCC | 5 cut(s) | 29, 48, 289, 322, 779 |
| BspCNI | CTCAG | 3 cut(s) | 307, 369, 570 |
| BspDI | ATCGAT | 2 cut(s) | 368, 372 |
| BspFNI | CGCG | 1 cut(s) | 14 |
| BspLI | GGNNCC | 2 cut(s) | 482, 674 |
| BspPI | GGATC | 2 cut(s) | 17, 593 |
| BspT104I | TTCGAA | 1 cut(s) | 442 |
| BspT107I | GGYRCC | 1 cut(s) | 480 |
| BspTI | CTTAAG | 2 cut(s) | 547, 890 |
| BspTNI | GGTCTC | 1 cut(s) | 558 |
| BsrDI | GCAATG | 1 cut(s) | 495 |
| BsrFI | RCCGGY | 1 cut(s) | 79 |
| BsrI | ACTGG | 1 cut(s) | 869 |
| BssAI | RCCGGY | 1 cut(s) | 79 |
| BssECI | CCNNGG | 4 cut(s) | 43, 323, 341, 517 |
| BssMI | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| BssNI | GRCGYC | 3 cut(s) | 179, 243, 255 |
| BssT1I | CCWWGG | 3 cut(s) | 43, 323, 341 |
| Bst2UI | CCWGG | 2 cut(s) | 519, 677 |
| Bst4CI | ACNGT | 5 cut(s) | 430, 474, 505, 688, 907 |
| Bst6I | CTCTTC | 1 cut(s) | 765 |
| BstACI | GRCGYC | 3 cut(s) | 179, 243, 255 |
| BstAFI | CTTAAG | 2 cut(s) | 547, 890 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 391 |
| BstBI | TTCGAA | 1 cut(s) | 442 |
| BstC8I | GCNNGC | 3 cut(s) | 383, 657, 744 |
| BstDEI | CTNAG | 3 cut(s) | 315, 377, 557 |
| BstDSI | CCRYGG | 3 cut(s) | 43, 323, 341 |
| BstF5I | GGATG | 5 cut(s) | 168, 182, 627, 901, 943 |
| BstFNI | CGCG | 1 cut(s) | 14 |
| BstHHI | GCGC | 1 cut(s) | 42 |
| BstKTI | GATC | 5 cut(s) | 12, 297, 372, 376, 588 |
| BstMAI | GTCTC | 3 cut(s) | 341, 463, 558 |
| BstMBI | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| BstMCI | CGRYCG | 2 cut(s) | 84, 372 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 242, 391, 923 |
| BstNI | CCWGG | 2 cut(s) | 519, 677 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 455 |
| BstSCI | CCNGG | 3 cut(s) | 517, 675, 750 |
| BstSFI | CTRYAG | 1 cut(s) | 849 |
| BstUI | CGCG | 1 cut(s) | 14 |
| BstV1I | GCAGC | 5 cut(s) | 73, 521, 525, 528, 858 |
| BstV2I | GAAGAC | 3 cut(s) | 404, 451, 691 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 575 |
| Bsu15I | ATCGAT | 2 cut(s) | 368, 372 |
| BsuRI | GGCC | 5 cut(s) | 29, 48, 289, 322, 779 |
| BsuTUI | ATCGAT | 2 cut(s) | 368, 372 |
| BtgI | CCRYGG | 3 cut(s) | 43, 323, 341 |
| BtsCI | GGATG | 5 cut(s) | 168, 182, 627, 901, 943 |
| BtsIMutI | CAGTG | 2 cut(s) | 684, 903 |
| Cac8I | GCNNGC | 3 cut(s) | 383, 657, 744 |
| CaiI | CAGNNNCTG | 1 cut(s) | 845 |
| CfoI | GCGC | 1 cut(s) | 42 |
| Cfr10I | RCCGGY | 1 cut(s) | 79 |
| Cfr13I | GGNCC | 1 cut(s) | 217 |
| ClaI | ATCGAT | 2 cut(s) | 368, 372 |
| CseI | GACGC | 3 cut(s) | 187, 251, 263 |
| Csp6I | GTAC | 4 cut(s) | 421, 664, 799, 836 |
| CviAII | CATG | 6 cut(s) | 44, 324, 337, 342, 389, 660 |
| CviQI | GTAC | 4 cut(s) | 421, 664, 799, 836 |
| DdeI | CTNAG | 3 cut(s) | 315, 377, 557 |
| DpnI | GATC | 5 cut(s) | 11, 296, 371, 375, 587 |
| DpnII | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| DraIII | CACNNNGTG | 1 cut(s) | 391 |
| EaeI | YGGCCR | 3 cut(s) | 27, 46, 320 |
| Eam1104I | CTCTTC | 1 cut(s) | 765 |
| EarI | CTCTTC | 1 cut(s) | 765 |
| EciI | GGCGGA | 2 cut(s) | 223, 224 |
| Ecl136II | GAGCTC | 3 cut(s) | 35, 171, 231 |
| Eco130I | CCWWGG | 3 cut(s) | 43, 323, 341 |
| Eco24I | GRGCYC | 3 cut(s) | 37, 173, 233 |
| Eco31I | GGTCTC | 1 cut(s) | 558 |
| Eco32I | GATATC | 2 cut(s) | 764, 1010 |
| Eco47I | GGWCC | 1 cut(s) | 217 |
| Eco53kI | GAGCTC | 3 cut(s) | 35, 171, 231 |
| EcoICRI | GAGCTC | 3 cut(s) | 35, 171, 231 |
| EcoRI | GAATTC | 1 cut(s) | 444 |
| EcoRII | CCWGG | 2 cut(s) | 517, 675 |
| EcoRV | GATATC | 2 cut(s) | 764, 1010 |
| EcoT14I | CCWWGG | 3 cut(s) | 43, 323, 341 |
| EcoT38I | GRGCYC | 3 cut(s) | 37, 173, 233 |
| ErhI | CCWWGG | 3 cut(s) | 43, 323, 341 |
| Esp3I | CGTCTC | 1 cut(s) | 463 |
| FaeI | CATG | 6 cut(s) | 47, 327, 340, 345, 392, 663 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 582, 614 |
| FaqI | GGGAC | 1 cut(s) | 500 |
| FatI | CATG | 6 cut(s) | 43, 323, 336, 341, 388, 659 |
| Fnu4HI | GCNGC | 8 cut(s) | 15, 87, 197, 200, 510, 539, 542, 872 |
| FokI | GGATG | 5 cut(s) | 169, 175, 634, 908, 950 |
| FriOI | GRGCYC | 3 cut(s) | 37, 173, 233 |
| Fsp4HI | GCNGC | 8 cut(s) | 15, 87, 197, 200, 510, 539, 542, 872 |
| FspBI | CTAG | 1 cut(s) | 767 |
| GlaI | GCGC | 1 cut(s) | 41 |
| GluI | GCNGC | 8 cut(s) | 15, 87, 197, 200, 510, 539, 542, 872 |
| GsaI | CCCAGC | 1 cut(s) | 998 |
| GsuI | CTGGAG | 2 cut(s) | 139, 886 |
| HaeIII | GGCC | 5 cut(s) | 29, 48, 289, 322, 779 |
| HapII | CCGG | 6 cut(s) | 7, 30, 49, 80, 206, 751 |
| HgaI | GACGC | 3 cut(s) | 187, 251, 263 |
| HhaI | GCGC | 1 cut(s) | 42 |
| Hin1I | GRCGYC | 3 cut(s) | 179, 243, 255 |
| Hin1II | CATG | 6 cut(s) | 47, 327, 340, 345, 392, 663 |
| Hin6I | GCGC | 1 cut(s) | 40 |
| HinP1I | GCGC | 1 cut(s) | 40 |
| HincII | GTYRAC | 1 cut(s) | 943 |
| HindII | GTYRAC | 1 cut(s) | 943 |
| HindIII | AAGCTT | 2 cut(s) | 434, 740 |
| HinfI | GANTC | 2 cut(s) | 696, 910 |
| HpaII | CCGG | 6 cut(s) | 7, 30, 49, 80, 206, 751 |
| HphI | GGTGA | 2 cut(s) | 187, 920 |
| Hpy166II | GTNNAC | 1 cut(s) | 943 |
| Hpy188I | TCNGA | 8 cut(s) | 117, 241, 316, 378, 450, 468, 560, 958 |
| Hpy188III | TCNNGA | 2 cut(s) | 407, 767 |
| Hpy8I | GTNNAC | 1 cut(s) | 943 |
| Hpy99I | CGWCG | 2 cut(s) | 245, 263 |
| HpyAV | CCTTC | 4 cut(s) | 208, 217, 721, 799 |
| HpyCH4III | ACNGT | 5 cut(s) | 430, 474, 505, 688, 907 |
| HpyCH4IV | ACGT | 1 cut(s) | 401 |
| HpyCH4V | TGCA | 9 cut(s) | 89, 488, 544, 625, 659, 691, 746, 917, 953 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 242, 391, 923 |
| HpyF3I | CTNAG | 3 cut(s) | 315, 377, 557 |
| HpySE526I | ACGT | 1 cut(s) | 401 |
| Hsp92I | GRCGYC | 3 cut(s) | 179, 243, 255 |
| Hsp92II | CATG | 6 cut(s) | 47, 327, 340, 345, 392, 663 |
| HspAI | GCGC | 1 cut(s) | 40 |
| Kzo9I | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| LmnI | GCTCC | 5 cut(s) | 32, 236, 678, 847, 1003 |
| Lsp1109I | GCAGC | 5 cut(s) | 73, 521, 525, 528, 858 |
| LweI | GCATC | 4 cut(s) | 483, 612, 871, 962 |
| MaeI | CTAG | 1 cut(s) | 767 |
| MaeII | ACGT | 1 cut(s) | 401 |
| MaeIII | GTNAC | 1 cut(s) | 175 |
| MalI | GATC | 5 cut(s) | 11, 296, 371, 375, 587 |
| MboI | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| MboII | GAAGA | 7 cut(s) | 409, 431, 451, 614, 691, 694, 782 |
| MfeI | CAATTG | 1 cut(s) | 855 |
| MhlI | GDGCHC | 3 cut(s) | 37, 173, 233 |
| MlsI | TGGCCA | 1 cut(s) | 322 |
| MluCI | AATT | 5 cut(s) | 328, 444, 825, 855, 980 |
| MluNI | TGGCCA | 1 cut(s) | 322 |
| MlyI | GAGTC | 1 cut(s) | 705 |
| MmeI | TCCRAC | 6 cut(s) | 264, 473, 508, 563, 739, 985 |
| Mox20I | TGGCCA | 1 cut(s) | 322 |
| MroXI | GAANNNNTTC | 1 cut(s) | 332 |
| MscI | TGGCCA | 1 cut(s) | 322 |
| MseI | TTAA | 3 cut(s) | 282, 548, 891 |
| MslI | CAYNNNNRTG | 1 cut(s) | 936 |
| Msp20I | TGGCCA | 1 cut(s) | 322 |
| MspA1I | CMGCKG | 1 cut(s) | 512 |
| MspCI | CTTAAG | 2 cut(s) | 547, 890 |
| MspI | CCGG | 6 cut(s) | 7, 30, 49, 80, 206, 751 |
| MspR9I | CCNGG | 3 cut(s) | 519, 677, 752 |
| MunI | CAATTG | 1 cut(s) | 855 |
| Mva1269I | GAATGC | 1 cut(s) | 540 |
| MvaI | CCWGG | 2 cut(s) | 519, 677 |
| MvnI | CGCG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 242, 391, 923 |
| NciI | CCSGG | 1 cut(s) | 752 |
| NcoI | CCATGG | 3 cut(s) | 43, 323, 341 |
| NdeII | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| NlaIII | CATG | 6 cut(s) | 47, 327, 340, 345, 392, 663 |
| NlaIV | GGNNCC | 2 cut(s) | 482, 674 |
| NmuCI | GTSAC | 1 cut(s) | 175 |
| NspV | TTCGAA | 1 cut(s) | 442 |
| PctI | GAATGC | 1 cut(s) | 540 |
| PdmI | GAANNNNTTC | 1 cut(s) | 332 |
| PfeI | GAWTC | 1 cut(s) | 910 |
| PflFI | GACNNNGTC | 1 cut(s) | 257 |
| PkrI | GCNGC | 8 cut(s) | 16, 88, 198, 201, 511, 540, 543, 873 |
| Ple19I | CGATCG | 1 cut(s) | 372 |
| PleI | GAGTC | 1 cut(s) | 704 |
| PpsI | GAGTC | 1 cut(s) | 704 |
| PshAI | GACNNNNGTC | 1 cut(s) | 455 |
| Psp124BI | GAGCTC | 3 cut(s) | 37, 173, 233 |
| Psp6I | CCWGG | 2 cut(s) | 517, 675 |
| PspFI | CCCAGC | 1 cut(s) | 994 |
| PspGI | CCWGG | 2 cut(s) | 517, 675 |
| PspN4I | GGNNCC | 2 cut(s) | 482, 674 |
| PspPI | GGNCC | 1 cut(s) | 217 |
| PstNI | CAGNNNCTG | 1 cut(s) | 845 |
| PsyI | GACNNNGTC | 1 cut(s) | 257 |
| PvuI | CGATCG | 1 cut(s) | 372 |
| PvuII | CAGCTG | 1 cut(s) | 512 |
| RsaI | GTAC | 4 cut(s) | 422, 665, 800, 837 |
| RsaNI | GTAC | 4 cut(s) | 421, 664, 799, 836 |
| RseI | CAYNNNNRTG | 1 cut(s) | 936 |
| SacI | GAGCTC | 3 cut(s) | 37, 173, 233 |
| SaqAI | TTAA | 3 cut(s) | 282, 548, 891 |
| SatI | GCNGC | 8 cut(s) | 15, 87, 197, 200, 510, 539, 542, 872 |
| Sau3AI | GATC | 5 cut(s) | 9, 294, 369, 373, 585 |
| Sau96I | GGNCC | 1 cut(s) | 217 |
| ScaI | AGTACT | 1 cut(s) | 800 |
| SchI | GAGTC | 1 cut(s) | 705 |
| ScrFI | CCNGG | 3 cut(s) | 519, 677, 752 |
| SduI | GDGCHC | 3 cut(s) | 37, 173, 233 |
| SfaNI | GCATC | 4 cut(s) | 483, 612, 871, 962 |
| SfcI | CTRYAG | 1 cut(s) | 849 |
| SfuI | TTCGAA | 1 cut(s) | 442 |
| SinI | GGWCC | 1 cut(s) | 217 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 936 |
| SmlI | CTYRAG | 2 cut(s) | 547, 890 |
| SmoI | CTYRAG | 2 cut(s) | 547, 890 |
| Sse9I | AATT | 5 cut(s) | 328, 444, 825, 855, 980 |
| SsiI | CCGC | 9 cut(s) | 14, 61, 105, 121, 135, 197, 200, 209, 234 |
| SspMI | CTAG | 1 cut(s) | 767 |
| SstI | GAGCTC | 3 cut(s) | 37, 173, 233 |
| StyD4I | CCNGG | 3 cut(s) | 517, 675, 750 |
| StyI | CCWWGG | 3 cut(s) | 43, 323, 341 |
| TaaI | ACNGT | 5 cut(s) | 430, 474, 505, 688, 907 |
| TaiI | ACGT | 1 cut(s) | 404 |
| TaqI | TCGA | 4 cut(s) | 71, 368, 372, 442 |
| TasI | AATT | 5 cut(s) | 328, 444, 825, 855, 980 |
| TatI | WGTACW | 1 cut(s) | 798 |
| TauI | GCSGC | 3 cut(s) | 17, 199, 202 |
| TfiI | GAWTC | 1 cut(s) | 910 |
| Tru1I | TTAA | 3 cut(s) | 282, 548, 891 |
| Tru9I | TTAA | 3 cut(s) | 282, 548, 891 |
| TscAI | CASTG | 2 cut(s) | 691, 910 |
| TseFI | GTSAC | 1 cut(s) | 175 |
| TseI | GCWGC | 5 cut(s) | 86, 509, 538, 541, 871 |
| Tsp45I | GTSAC | 1 cut(s) | 175 |
| TspDTI | ATGAA | 4 cut(s) | 17, 325, 936, 953 |
| TspGWI | ACGGA | 1 cut(s) | 175 |
| TspRI | CASTG | 2 cut(s) | 691, 910 |
| Tth111I | GACNNNGTC | 1 cut(s) | 257 |
| Vha464I | CTTAAG | 2 cut(s) | 547, 890 |
| VpaK11BI | GGWCC | 1 cut(s) | 217 |
| XapI | RAATTY | 1 cut(s) | 444 |
| XbaI | TCTAGA | 1 cut(s) | 766 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 575 |
| XmnI | GAANNNNTTC | 1 cut(s) | 332 |
| XspI | CTAG | 1 cut(s) | 767 |
| ZrmI | AGTACT | 1 cut(s) | 800 |