Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G30350 AT2G30350 |
| fragaria_vesca | FvH4_3g40230 FvH4_3g40230 |
| malus_domestica | MD03G1055200.v1.1 MD11G1056400.v1.1 |
| prunus_persica | Prupe.1G103300_v2.0.a1 Prupe.1G103400_v2.0.a1 Prupe.1G106000_v2.0.a1 Prupe.1G108400_v2.0.a1 Prupe.3G073500_v2.0.a1 Prupe.3G073500_v2.0.a1 Prupe.3G073500_v2.0.a1 Prupe.6G043600_v2.0.a1 Prupe.6G045800_v2.0.a1 |
| pyrus_communis | pycom03g04370 pycom11g04670 |
| rosa_chinensis | RchiOBHm_Chr5g0072441 |
| rosa_laevigata | RLG00000036299 |
| rosa_multiflora | Rmu_sc0008676.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00008770 |
| rosa_rugosa | Rorug05G0418300 |
| rosa_samantha | Rh5AG474700 Rh5BG494800 Rh5CG518800 Rh5DG506900 |
| rosa_wichuraiana | Rw5G044080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 301 |
| AclWI | GGATC | 1 cut(s) | 265 |
| AfaI | GTAC | 2 cut(s) | 35, 157 |
| AgsI | TTSAA | 2 cut(s) | 71, 204 |
| AluBI | AGCT | 3 cut(s) | 314, 351, 371 |
| AluI | AGCT | 3 cut(s) | 314, 351, 371 |
| Alw26I | GTCTC | 1 cut(s) | 342 |
| AlwI | GGATC | 1 cut(s) | 265 |
| AoxI | GGCC | 2 cut(s) | 286, 359 |
| AspS9I | GGNCC | 1 cut(s) | 286 |
| BbvCI | CCTCAGC | 1 cut(s) | 372 |
| BccI | CCATC | 2 cut(s) | 205, 402 |
| BclI | TGATCA | 2 cut(s) | 85, 331 |
| BcoDI | GTCTC | 1 cut(s) | 342 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BfuAI | ACCTGC | 1 cut(s) | 301 |
| BglII | AGATCT | 1 cut(s) | 58 |
| BmgT120I | GGNCC | 1 cut(s) | 286 |
| BmsI | GCATC | 2 cut(s) | 119, 188 |
| Bpu10I | CCTNAGC | 1 cut(s) | 372 |
| BsaBI | GATNNNNATC | 1 cut(s) | 330 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 360, 390 |
| Bse1I | ACTGG | 2 cut(s) | 106, 185 |
| Bse8I | GATNNNNATC | 1 cut(s) | 330 |
| BseGI | GGATG | 3 cut(s) | 100, 134, 394 |
| BseJI | GATNNNNATC | 1 cut(s) | 330 |
| BseMII | CTCAG | 1 cut(s) | 363 |
| BseNI | ACTGG | 2 cut(s) | 106, 185 |
| BseYI | CCCAGC | 1 cut(s) | 341 |
| BshFI | GGCC | 2 cut(s) | 288, 361 |
| BsiSI | CCGG | 1 cut(s) | 358 |
| BsmAI | GTCTC | 1 cut(s) | 342 |
| BsmI | GAATGC | 1 cut(s) | 198 |
| BsnI | GGCC | 2 cut(s) | 288, 361 |
| Bsp1407I | TGTACA | 1 cut(s) | 155 |
| Bsp143I | GATC | 4 cut(s) | 58, 85, 257, 331 |
| BspANI | GGCC | 2 cut(s) | 288, 361 |
| BspCNI | CTCAG | 1 cut(s) | 364 |
| BspMI | ACCTGC | 1 cut(s) | 301 |
| BspPI | GGATC | 1 cut(s) | 265 |
| BsrGI | TGTACA | 1 cut(s) | 155 |
| BsrI | ACTGG | 2 cut(s) | 106, 185 |
| BssMI | GATC | 4 cut(s) | 58, 85, 257, 331 |
| BstAUI | TGTACA | 1 cut(s) | 155 |
| BstDEI | CTNAG | 1 cut(s) | 372 |
| BstF5I | GGATG | 3 cut(s) | 100, 134, 394 |
| BstKTI | GATC | 4 cut(s) | 61, 88, 260, 334 |
| BstMAI | GTCTC | 1 cut(s) | 342 |
| BstMBI | GATC | 4 cut(s) | 58, 85, 257, 331 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 320 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| BstX2I | RGATCY | 2 cut(s) | 58, 257 |
| BstYI | RGATCY | 2 cut(s) | 58, 257 |
| BsuRI | GGCC | 2 cut(s) | 288, 361 |
| BtgZI | GCGATG | 1 cut(s) | 165 |
| BtsCI | GGATG | 3 cut(s) | 100, 134, 394 |
| BtsI | GCAGTG | 1 cut(s) | 139 |
| BtsIMutI | CAGTG | 2 cut(s) | 139, 192 |
| BveI | ACCTGC | 1 cut(s) | 301 |
| Cfr13I | GGNCC | 1 cut(s) | 286 |
| Csp6I | GTAC | 2 cut(s) | 34, 156 |
| CviAII | CATG | 2 cut(s) | 37, 271 |
| CviJI | RGCY | 6 cut(s) | 288, 314, 351, 361, 371, 411 |
| CviKI_1 | RGCY | 6 cut(s) | 288, 314, 351, 361, 371, 411 |
| CviQI | GTAC | 2 cut(s) | 34, 156 |
| DdeI | CTNAG | 1 cut(s) | 372 |
| DpnI | GATC | 4 cut(s) | 60, 87, 259, 333 |
| DpnII | GATC | 4 cut(s) | 58, 85, 257, 331 |
| FaeI | CATG | 2 cut(s) | 40, 274 |
| FatI | CATG | 2 cut(s) | 36, 270 |
| FauNDI | CATATG | 1 cut(s) | 124 |
| FbaI | TGATCA | 2 cut(s) | 85, 331 |
| FokI | GGATG | 3 cut(s) | 107, 141, 381 |
| GsaI | CCCAGC | 1 cut(s) | 345 |
| HaeIII | GGCC | 2 cut(s) | 288, 361 |
| HapII | CCGG | 1 cut(s) | 358 |
| Hin1II | CATG | 2 cut(s) | 40, 274 |
| HpaII | CCGG | 1 cut(s) | 358 |
| Hpy188I | TCNGA | 2 cut(s) | 58, 265 |
| HpyCH4IV | ACGT | 1 cut(s) | 32 |
| HpyCH4V | TGCA | 4 cut(s) | 132, 296, 323, 405 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 320 |
| HpyF3I | CTNAG | 1 cut(s) | 372 |
| HpySE526I | ACGT | 1 cut(s) | 32 |
| Hsp92II | CATG | 2 cut(s) | 40, 274 |
| Ksp22I | TGATCA | 2 cut(s) | 85, 331 |
| Kzo9I | GATC | 4 cut(s) | 58, 85, 257, 331 |
| LmnI | GCTCC | 1 cut(s) | 368 |
| LpnPI | CCDG | 6 cut(s) | 77, 87, 198, 306, 355, 371 |
| LweI | GCATC | 2 cut(s) | 119, 188 |
| MaeII | ACGT | 1 cut(s) | 32 |
| MaeIII | GTNAC | 1 cut(s) | 232 |
| MalI | GATC | 4 cut(s) | 60, 87, 259, 333 |
| MboI | GATC | 4 cut(s) | 58, 85, 257, 331 |
| MboII | GAAGA | 3 cut(s) | 56, 192, 252 |
| MflI | RGATCY | 2 cut(s) | 58, 257 |
| MluCI | AATT | 3 cut(s) | 111, 164, 450 |
| MnlI | CCTC | 3 cut(s) | 142, 226, 367 |
| MseI | TTAA | 2 cut(s) | 114, 416 |
| MslI | CAYNNNNRTG | 1 cut(s) | 127 |
| MspI | CCGG | 1 cut(s) | 358 |
| Mva1269I | GAATGC | 1 cut(s) | 198 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 320 |
| NdeI | CATATG | 1 cut(s) | 124 |
| NdeII | GATC | 4 cut(s) | 58, 85, 257, 331 |
| NlaIII | CATG | 2 cut(s) | 40, 274 |
| PctI | GAATGC | 1 cut(s) | 198 |
| PspFI | CCCAGC | 1 cut(s) | 341 |
| PspPI | GGNCC | 1 cut(s) | 286 |
| PsuI | RGATCY | 2 cut(s) | 58, 257 |
| RsaI | GTAC | 2 cut(s) | 35, 157 |
| RsaNI | GTAC | 2 cut(s) | 34, 156 |
| RseI | CAYNNNNRTG | 1 cut(s) | 127 |
| SaqAI | TTAA | 2 cut(s) | 114, 416 |
| Sau3AI | GATC | 4 cut(s) | 58, 85, 257, 331 |
| Sau96I | GGNCC | 1 cut(s) | 286 |
| SetI | ASST | 8 cut(s) | 35, 218, 250, 295, 316, 353, 373, 378 |
| SfaNI | GCATC | 2 cut(s) | 119, 188 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 127 |
| Sse9I | AATT | 3 cut(s) | 111, 164, 450 |
| TaiI | ACGT | 1 cut(s) | 35 |
| TaqI | TCGA | 1 cut(s) | 308 |
| TasI | AATT | 3 cut(s) | 111, 164, 450 |
| TatI | WGTACW | 1 cut(s) | 155 |
| Tru1I | TTAA | 2 cut(s) | 114, 416 |
| Tru9I | TTAA | 2 cut(s) | 114, 416 |
| TscAI | CASTG | 2 cut(s) | 139, 192 |
| TspRI | CASTG | 2 cut(s) | 139, 192 |