Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G30350 AT2G30350 |
| fragaria_vesca | FvH4_3g40230 FvH4_3g40230 |
| malus_domestica | MD03G1055200.v1.1 MD11G1056400.v1.1 |
| prunus_persica | Prupe.1G103300_v2.0.a1 Prupe.1G103400_v2.0.a1 Prupe.1G106000_v2.0.a1 Prupe.1G108400_v2.0.a1 Prupe.3G073500_v2.0.a1 Prupe.3G073500_v2.0.a1 Prupe.3G073500_v2.0.a1 Prupe.6G043600_v2.0.a1 Prupe.6G045800_v2.0.a1 |
| pyrus_communis | pycom03g04370 pycom11g04670 |
| rosa_chinensis | RchiOBHm_Chr5g0072441 |
| rosa_laevigata | RLG00000036299 |
| rosa_multiflora | Rmu_sc0008676.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00008770 |
| rosa_rugosa | Rorug05G0418300 |
| rosa_samantha | Rh5AG474700 Rh5BG494800 Rh5CG518800 Rh5DG506900 |
| rosa_wichuraiana | Rw5G044080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 75 |
| AciI | CCGC | 3 cut(s) | 283, 343, 529 |
| AclI | AACGTT | 1 cut(s) | 387 |
| AclWI | GGATC | 1 cut(s) | 148 |
| AgsI | TTSAA | 2 cut(s) | 15, 412 |
| AjnI | CCWGG | 2 cut(s) | 323, 418 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 331, 363, 373, 405 |
| AluBI | AGCT | 3 cut(s) | 467, 504, 542 |
| AluI | AGCT | 3 cut(s) | 467, 504, 542 |
| Alw26I | GTCTC | 1 cut(s) | 99 |
| AlwI | GGATC | 1 cut(s) | 148 |
| AoxI | GGCC | 3 cut(s) | 247, 344, 416 |
| ApeKI | GCWGC | 4 cut(s) | 231, 295, 457, 460 |
| AspS9I | GGNCC | 2 cut(s) | 247, 416 |
| BbvI | GCAGC | 4 cut(s) | 243, 307, 444, 447 |
| BccI | CCATC | 2 cut(s) | 188, 349 |
| BciT130I | CCWGG | 2 cut(s) | 325, 420 |
| BcoDI | GTCTC | 1 cut(s) | 99 |
| BisI | GCNGC | 6 cut(s) | 232, 284, 296, 344, 458, 461 |
| BlsI | GCNGC | 6 cut(s) | 233, 285, 297, 345, 459, 462 |
| Bme1390I | CCNGG | 2 cut(s) | 325, 420 |
| BmgT120I | GGNCC | 2 cut(s) | 247, 416 |
| BmiI | GGNNCC | 1 cut(s) | 322 |
| BmrFI | CCNGG | 2 cut(s) | 325, 420 |
| BmsI | GCATC | 2 cut(s) | 159, 375 |
| BpmI | CTGGAG | 2 cut(s) | 346, 383 |
| BsaJI | CCNNGG | 4 cut(s) | 278, 347, 477, 532 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 473, 503 |
| Bse1I | ACTGG | 1 cut(s) | 400 |
| BseBI | CCWGG | 2 cut(s) | 325, 420 |
| BseDI | CCNNGG | 4 cut(s) | 278, 347, 477, 532 |
| BseNI | ACTGG | 1 cut(s) | 400 |
| BseXI | GCAGC | 4 cut(s) | 243, 307, 444, 447 |
| BsgI | GTGCAG | 1 cut(s) | 424 |
| Bsh1285I | CGRYCG | 1 cut(s) | 49 |
| BshFI | GGCC | 3 cut(s) | 249, 346, 418 |
| BsiEI | CGRYCG | 1 cut(s) | 49 |
| BsmAI | GTCTC | 1 cut(s) | 99 |
| BsmBI | CGTCTC | 1 cut(s) | 99 |
| BsnI | GGCC | 3 cut(s) | 249, 346, 418 |
| Bsp143I | GATC | 2 cut(s) | 140, 497 |
| Bsp19I | CCATGG | 1 cut(s) | 532 |
| BspACI | CCGC | 3 cut(s) | 283, 343, 529 |
| BspANI | GGCC | 3 cut(s) | 249, 346, 418 |
| BspLI | GGNNCC | 1 cut(s) | 322 |
| BspPI | GGATC | 1 cut(s) | 148 |
| BsrI | ACTGG | 1 cut(s) | 400 |
| BssECI | CCNNGG | 4 cut(s) | 278, 347, 477, 532 |
| BssMI | GATC | 2 cut(s) | 140, 497 |
| BssNAI | GTATAC | 1 cut(s) | 76 |
| BssT1I | CCWWGG | 3 cut(s) | 347, 477, 532 |
| Bst1107I | GTATAC | 1 cut(s) | 76 |
| Bst2UI | CCWGG | 2 cut(s) | 325, 420 |
| Bst4CI | ACNGT | 4 cut(s) | 20, 47, 271, 435 |
| Bst6I | CTCTTC | 1 cut(s) | 530 |
| BstC8I | GCNNGC | 4 cut(s) | 211, 455, 465, 506 |
| BstDSI | CCRYGG | 1 cut(s) | 532 |
| BstKTI | GATC | 2 cut(s) | 143, 500 |
| BstMAI | GTCTC | 1 cut(s) | 99 |
| BstMBI | GATC | 2 cut(s) | 140, 497 |
| BstMCI | CGRYCG | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 237, 246, 292, 343 |
| BstNI | CCWGG | 2 cut(s) | 325, 420 |
| BstSCI | CCNGG | 2 cut(s) | 323, 418 |
| BstV1I | GCAGC | 4 cut(s) | 243, 307, 444, 447 |
| BstZ17I | GTATAC | 1 cut(s) | 76 |
| BsuRI | GGCC | 3 cut(s) | 249, 346, 418 |
| BtgI | CCRYGG | 1 cut(s) | 532 |
| BtgZI | GCGATG | 1 cut(s) | 182 |
| BtsIMutI | CAGTG | 2 cut(s) | 276, 407 |
| Cac8I | GCNNGC | 4 cut(s) | 211, 455, 465, 506 |
| Cfr13I | GGNCC | 2 cut(s) | 247, 416 |
| CviAII | CATG | 1 cut(s) | 533 |
| DpnI | GATC | 2 cut(s) | 142, 499 |
| DpnII | GATC | 2 cut(s) | 140, 497 |
| DraI | TTTAAA | 1 cut(s) | 471 |
| Eam1104I | CTCTTC | 1 cut(s) | 530 |
| EarI | CTCTTC | 1 cut(s) | 530 |
| EciI | GGCGGA | 1 cut(s) | 518 |
| Eco130I | CCWWGG | 3 cut(s) | 347, 477, 532 |
| EcoRII | CCWGG | 2 cut(s) | 323, 418 |
| EcoT14I | CCWWGG | 3 cut(s) | 347, 477, 532 |
| ErhI | CCWWGG | 3 cut(s) | 347, 477, 532 |
| Esp3I | CGTCTC | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 536 |
| FaiI | YATR | 4 cut(s) | 76, 258, 372, 534 |
| FatI | CATG | 1 cut(s) | 532 |
| FblI | GTMKAC | 1 cut(s) | 75 |
| Fnu4HI | GCNGC | 6 cut(s) | 232, 284, 296, 344, 458, 461 |
| Fsp4HI | GCNGC | 6 cut(s) | 232, 284, 296, 344, 458, 461 |
| GluI | GCNGC | 6 cut(s) | 232, 284, 296, 344, 458, 461 |
| GsuI | CTGGAG | 2 cut(s) | 346, 383 |
| HaeIII | GGCC | 3 cut(s) | 249, 346, 418 |
| Hin1II | CATG | 1 cut(s) | 536 |
| HincII | GTYRAC | 1 cut(s) | 222 |
| HindII | GTYRAC | 1 cut(s) | 222 |
| HindIII | AAGCTT | 2 cut(s) | 465, 502 |
| HinfI | GANTC | 4 cut(s) | 51, 201, 274, 426 |
| Hpy166II | GTNNAC | 4 cut(s) | 76, 98, 222, 267 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 279 |
| Hpy8I | GTNNAC | 4 cut(s) | 76, 98, 222, 267 |
| HpyAV | CCTTC | 1 cut(s) | 182 |
| HpyCH4III | ACNGT | 4 cut(s) | 20, 47, 271, 435 |
| HpyCH4IV | ACGT | 1 cut(s) | 387 |
| HpyCH4V | TGCA | 4 cut(s) | 366, 405, 463, 508 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 237, 246, 292, 343 |
| HpySE526I | ACGT | 1 cut(s) | 387 |
| Hsp92II | CATG | 1 cut(s) | 536 |
| Kzo9I | GATC | 2 cut(s) | 140, 497 |
| LmnI | GCTCC | 1 cut(s) | 320 |
| LpnPI | CCDG | 9 cut(s) | 123, 165, 186, 310, 337, 405, 413, 432, 439 |
| Lsp1109I | GCAGC | 4 cut(s) | 243, 307, 444, 447 |
| LweI | GCATC | 2 cut(s) | 159, 375 |
| MaeII | ACGT | 1 cut(s) | 387 |
| MalI | GATC | 2 cut(s) | 142, 499 |
| MboI | GATC | 2 cut(s) | 140, 497 |
| MboII | GAAGA | 5 cut(s) | 139, 191, 194, 197, 517 |
| MluCI | AATT | 2 cut(s) | 23, 66 |
| MmeI | TCCRAC | 2 cut(s) | 66, 454 |
| MnlI | CCTC | 7 cut(s) | 89, 114, 169, 235, 246, 273, 475 |
| MseI | TTAA | 2 cut(s) | 26, 470 |
| MspR9I | CCNGG | 2 cut(s) | 325, 420 |
| MvaI | CCWGG | 2 cut(s) | 325, 420 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 237, 246, 292, 343 |
| NcoI | CCATGG | 1 cut(s) | 532 |
| NdeII | GATC | 2 cut(s) | 140, 497 |
| NlaIII | CATG | 1 cut(s) | 536 |
| NlaIV | GGNNCC | 1 cut(s) | 322 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 51 |
| PfeI | GAWTC | 4 cut(s) | 51, 201, 274, 426 |
| PkrI | GCNGC | 6 cut(s) | 233, 285, 297, 345, 459, 462 |
| Psp1406I | AACGTT | 1 cut(s) | 387 |
| Psp6I | CCWGG | 2 cut(s) | 323, 418 |
| PspGI | CCWGG | 2 cut(s) | 323, 418 |
| PspN4I | GGNNCC | 1 cut(s) | 322 |
| PspPI | GGNCC | 2 cut(s) | 247, 416 |
| SaqAI | TTAA | 2 cut(s) | 26, 470 |
| SatI | GCNGC | 6 cut(s) | 232, 284, 296, 344, 458, 461 |
| Sau3AI | GATC | 2 cut(s) | 140, 497 |
| Sau96I | GGNCC | 2 cut(s) | 247, 416 |
| ScrFI | CCNGG | 2 cut(s) | 325, 420 |
| SetI | ASST | 6 cut(s) | 81, 227, 390, 469, 506, 544 |
| SfaNI | GCATC | 2 cut(s) | 159, 375 |
| Sse9I | AATT | 2 cut(s) | 23, 66 |
| SsiI | CCGC | 3 cut(s) | 283, 343, 529 |
| SspI | AATATT | 1 cut(s) | 38 |
| StyD4I | CCNGG | 2 cut(s) | 323, 418 |
| StyI | CCWWGG | 3 cut(s) | 347, 477, 532 |
| TaaI | ACNGT | 4 cut(s) | 20, 47, 271, 435 |
| TaiI | ACGT | 1 cut(s) | 390 |
| TaqI | TCGA | 2 cut(s) | 49, 199 |
| TasI | AATT | 2 cut(s) | 23, 66 |
| TauI | GCSGC | 2 cut(s) | 286, 346 |
| TfiI | GAWTC | 4 cut(s) | 51, 201, 274, 426 |
| Tru1I | TTAA | 2 cut(s) | 26, 470 |
| Tru9I | TTAA | 2 cut(s) | 26, 470 |
| TscAI | CASTG | 2 cut(s) | 276, 407 |
| TseI | GCWGC | 4 cut(s) | 231, 295, 457, 460 |
| TspDTI | ATGAA | 1 cut(s) | 49 |
| TspGWI | ACGGA | 1 cut(s) | 318 |
| TspRI | CASTG | 2 cut(s) | 276, 407 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 257 |
| XmiI | GTMKAC | 1 cut(s) | 75 |