Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013311

Physical Location & Seq

Genomic Coordinates Reverse (-)

11678123 .. 11681258

Gene Structure 3136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G149000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGCAAACCCTGTCACATACTGTTAGGCTCTATCCAAGAAAGGAGAAAACATTAGCGAAAACCCACACCCCATCTATAACCACAGAGCTGAGATTCCATGTCCTGCTTCCCCAACCTCATATAGTGCACCCTCCCCTTTCTCATTCTCTCTACCTCTCAATGTTTCGTAGATTCCTCACCACCTCTCTCTCTCGCACCAATCCTCCTCTCCTCCTCAACCCAAAACCACTCAACCCTAAAATCTTCACAACCCCCAATTCCCTCATCCAAACACGCCCCAACCCGAAACTCATTCTCCAATTTTCTTCAAACCCACGATTCTTCTCCCAAATGAGCGATGCTCGACGACCCGGTTCGGTTCCCATACCCAACATCGAAAAAGCCGACCGCTCCGAGATTCTTCGTGCTCTTGAGGCCTCTCTTGGCTCAGCTTTCAGCCCTGAGCCACTCTGGCCCAATCCCAGTCCTCTGGTTATTGTCATAAGCGGTCCAAGCGGTGTGGGCAAGGACGCTGTGATAAGAAAGCTCAAGGATTTGAACGAAAACTTGCATTTTGTGGTCACGGCGACGAGCCGGGAAATACGGCCCGGTGAAGTTCATGGTAAAGATTATTACTTTGTGAGCAAAGAGGAGTTTCTTACAATGGTTGAGAGAAATGAGCTTTTGGAATATGCATTGGTGTATGGAGACTATAAGGGTATACCAAAACAGCAGATAAGGGATTATATGGGAAAAGGGTATGACATAGTTTTGAGAGTTGACATTCAGGGTGCTCAAACTTTGAGGAGGATTCTTGGGAATTCGGCTGTTTTTATCTTTTTGATGGCAGAGAGTGAAGCCAAGCTTGTGGAGAGGTTGATTGATAGGAAAACTGAGACTAAGGAGTCTCTTCTTGTTAGAATTGCCACTGCCAGGGAGGAGGTGAAGCATGTTAACAATTTTGACTATGTTGTGGTCAATGCAGAGGGGAGGTTAGACAATGCTGTTAAGTTGGTCGAGTCCATTATCGACGCAGAGAAAGCTAAGGTCCGGCAGAGGCATTCTGTGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009126 GO:0009132 GO:0009135 GO:0009150 GO:0009161 GO:0009165 GO:0009167 GO:0009179 GO:0009185 GO:0009259 GO:0009507 GO:0009536 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0019693 GO:0034641 GO:0034654 GO:0040008 GO:0042278 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046037 GO:0046128 GO:0046483 GO:0046710 GO:0046940 GO:0048638 GO:0050145 GO:0050789 GO:0050793 GO:0055086 GO:0065007 GO:0071704 GO:0072521 GO:0090407 GO:1901068 GO:1901135 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 map00230 map01100

Pfam Domains

Protein Families

Guanylate_kin

Protein Analysis

351

Amino Acids

39.75

Weight (kDa)

9.71

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06200
fragaria_vesca	FvH4_4g14220
malus_domestica	MD13G1180900.v1.1 MD16G1181600.v1.1
prunus_persica	Prupe.1G149000_v2.0.a1 Prupe.1G149000_v2.0.a1
pyrus_communis	pycom13g15610 pycom16g15240
rosa_chinensis	RchiOBHm_Chr4g0418951
rosa_laevigata	RLG00000007839
rosa_multiflora	Rmu_sc0000935.1_g000061
rosa_roxburghii	Rroxscaffold_5G00362040
rosa_rugosa	Rorug04G0155400 Rorug04G0155500
rosa_samantha	Rh4BG212800 Rh4CG229400 Rh4DG216100
rosa_wichuraiana	Rw4G018580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	883
AccBSI	CCGCTC	1 cut(s)	390
AccI	GTMKAC	1 cut(s)	700
AciI	CCGC	3 cut(s)	388, 486, 495
AcsI	RAATTY	1 cut(s)	799
AfiI	CCNNNNNNNGG	1 cut(s)	912
AgsI	TTSAA	2 cut(s)	309, 538
AjnI	CCWGG	1 cut(s)	911
AluBI	AGCT	6 cut(s)	88, 431, 526, 661, 844, 1022
AluI	AGCT	6 cut(s)	88, 431, 526, 661, 844, 1022
Alw21I	GWGCWC	3 cut(s)	129, 409, 775
Alw26I	GTCTC	3 cut(s)	681, 869, 891
Alw44I	GTGCAC	1 cut(s)	125
AoxI	GGCC	3 cut(s)	414, 452, 584
ApaLI	GTGCAC	1 cut(s)	125
ApoI	RAATTY	1 cut(s)	799
AspS9I	GGNCC	4 cut(s)	453, 488, 585, 1027
AsuC2I	CCSGG	3 cut(s)	351, 575, 588
AsuHPI	GGTGA	3 cut(s)	169, 602, 934
AvaII	GGWCC	2 cut(s)	488, 1027
BaeGI	GKGCMC	1 cut(s)	129
Bbv12I	GWGCWC	3 cut(s)	129, 409, 775
BccI	CCATC	2 cut(s)	79, 817
BceAI	ACGGC	2 cut(s)	579, 599
BciT130I	CCWGG	1 cut(s)	913
BcnI	CCSGG	3 cut(s)	351, 575, 588
BcoDI	GTCTC	3 cut(s)	681, 869, 891
BglI	GCCNNNNNGGC	1 cut(s)	451
BlpI	GCTNAGC	1 cut(s)	427
Bme1390I	CCNGG	4 cut(s)	351, 575, 588, 913
Bme18I	GGWCC	2 cut(s)	488, 1027
BmgT120I	GGNCC	4 cut(s)	453, 488, 585, 1027
BmiI	GGNNCC	1 cut(s)	360
BmrFI	CCNGG	4 cut(s)	351, 575, 588, 913
BmrI	ACTGGG	1 cut(s)	456
BmsI	GCATC	1 cut(s)	328
BmuI	ACTGGG	1 cut(s)	456
BplI	GAGNNNNNCTC	2 cut(s)	325, 357
Bpu10I	CCTNAGC	2 cut(s)	441, 1023
Bpu1102I	GCTNAGC	1 cut(s)	427
BpuEI	CTTGAG	2 cut(s)	431, 512
BpuMI	CCSGG	3 cut(s)	351, 575, 588
BsaJI	CCNNGG	1 cut(s)	912
BsaXI	ACNNNNNCTCC	4 cut(s)	187, 217, 279, 309
Bsc4I	CCNNNNNNNGG	1 cut(s)	912
Bse1I	ACTGG	1 cut(s)	462
BseBI	CCWGG	1 cut(s)	913
BseDI	CCNNGG	1 cut(s)	912
BseGI	GGATG	1 cut(s)	264
BseLI	CCNNNNNNNGG	1 cut(s)	912
BseMII	CTCAG	4 cut(s)	80, 432, 441, 864
BseNI	ACTGG	1 cut(s)	462
BseRI	GAGGAG	6 cut(s)	195, 200, 203, 644, 799, 932
BseSI	GKGCMC	1 cut(s)	129
Bsh1285I	CGRYCG	1 cut(s)	388
BshFI	GGCC	3 cut(s)	416, 454, 586
BsiEI	CGRYCG	1 cut(s)	388
BsiHKAI	GWGCWC	3 cut(s)	129, 409, 775
BsiSI	CCGG	4 cut(s)	351, 574, 588, 1030
BslI	CCNNNNNNNGG	1 cut(s)	912
BsmAI	GTCTC	3 cut(s)	681, 869, 891
BsmI	GAATGC	1 cut(s)	1039
BsnI	GGCC	3 cut(s)	416, 454, 586
Bsp1286I	GDGCHC	3 cut(s)	129, 409, 775
Bsp1720I	GCTNAGC	1 cut(s)	427
BspACI	CCGC	3 cut(s)	388, 486, 495
BspANI	GGCC	3 cut(s)	416, 454, 586
BspCNI	CTCAG	4 cut(s)	81, 433, 440, 865
BspLI	GGNNCC	1 cut(s)	360
BsrBI	CCGCTC	1 cut(s)	390
BsrI	ACTGG	1 cut(s)	462
BssECI	CCNNGG	1 cut(s)	912
BssNAI	GTATAC	1 cut(s)	701
Bst1107I	GTATAC	1 cut(s)	701
Bst2UI	CCWGG	1 cut(s)	913
Bst4CI	ACNGT	1 cut(s)	22
Bst6I	CTCTTC	1 cut(s)	894
BstDEI	CTNAG	6 cut(s)	89, 427, 441, 873, 879, 1023
BstF5I	GGATG	1 cut(s)	264
BstMAI	GTCTC	3 cut(s)	681, 869, 891
BstMCI	CGRYCG	1 cut(s)	388
BstMWI	GCNNNNNNNGC	5 cut(s)	413, 451, 492, 501, 1019
BstNI	CCWGG	1 cut(s)	913
BstNSI	RCATGY	1 cut(s)	932
BstSCI	CCNGG	4 cut(s)	349, 573, 586, 911
BstSLI	GKGCMC	1 cut(s)	129
BstXI	CCANNNNNNTGG	2 cut(s)	469, 847
BstZ17I	GTATAC	1 cut(s)	701
BsuRI	GGCC	3 cut(s)	416, 454, 586
BtgZI	GCGATG	1 cut(s)	351
BtsCI	GGATG	1 cut(s)	264
BtsI	GCAGTG	1 cut(s)	906
BtsIMutI	CAGTG	1 cut(s)	906
Cfr13I	GGNCC	4 cut(s)	453, 488, 585, 1027
CseI	GACGC	2 cut(s)	518, 1019
CspCI	CAANNNNNGTGG	2 cut(s)	480, 515
CviAII	CATG	3 cut(s)	98, 599, 929
DdeI	CTNAG	6 cut(s)	89, 427, 441, 873, 879, 1023
DrdI	GACNNNNNNGTC	1 cut(s)	883
DseDI	GACNNNNNNGTC	1 cut(s)	883
Eam1104I	CTCTTC	1 cut(s)	894
EarI	CTCTTC	1 cut(s)	894
Eco147I	AGGCCT	1 cut(s)	416
Eco47I	GGWCC	2 cut(s)	488, 1027
EcoRI	GAATTC	1 cut(s)	799
EcoRII	CCWGG	1 cut(s)	911
EcoT22I	ATGCAT	1 cut(s)	676
FaeI	CATG	3 cut(s)	101, 602, 932
FalI	AAGNNNNNCTT	2 cut(s)	828, 860
FatI	CATG	3 cut(s)	97, 598, 928
FblI	GTMKAC	1 cut(s)	700
FokI	GGATG	1 cut(s)	251
HaeIII	GGCC	3 cut(s)	416, 454, 586
HapII	CCGG	4 cut(s)	351, 574, 588, 1030
HgaI	GACGC	2 cut(s)	518, 1019
Hin1II	CATG	3 cut(s)	101, 602, 932
HincII	GTYRAC	2 cut(s)	760, 934
HindII	GTYRAC	2 cut(s)	760, 934
HindIII	AAGCTT	1 cut(s)	842
HinfI	GANTC	7 cut(s)	93, 171, 318, 397, 790, 884, 998
HpaI	GTTAAC	1 cut(s)	934
HpaII	CCGG	4 cut(s)	351, 574, 588, 1030
HphI	GGTGA	3 cut(s)	169, 602, 934
Hpy166II	GTNNAC	4 cut(s)	127, 701, 760, 934
Hpy188I	TCNGA	1 cut(s)	394
Hpy188III	TCNNGA	1 cut(s)	410
Hpy8I	GTNNAC	4 cut(s)	127, 701, 760, 934
Hpy99I	CGWCG	3 cut(s)	348, 571, 1013
HpyCH4III	ACNGT	1 cut(s)	22
HpyCH4V	TGCA	5 cut(s)	4, 127, 550, 674, 962
HpyF10VI	GCNNNNNNNGC	5 cut(s)	413, 451, 492, 501, 1019
HpyF3I	CTNAG	6 cut(s)	89, 427, 441, 873, 879, 1023
Hsp92II	CATG	3 cut(s)	101, 602, 932
KspAI	GTTAAC	1 cut(s)	934
LmnI	GCTCC	1 cut(s)	395
LweI	GCATC	1 cut(s)	328
MaeIII	GTNAC	2 cut(s)	12, 559
MbiI	CCGCTC	1 cut(s)	390
MboII	GAAGA	5 cut(s)	235, 297, 313, 392, 881
MhlI	GDGCHC	3 cut(s)	129, 409, 775
MluCI	AATT	5 cut(s)	256, 299, 799, 900, 937
MlyI	GAGTC	2 cut(s)	893, 1007
Mph1103I	ATGCAT	1 cut(s)	676
MseI	TTAA	2 cut(s)	933, 987
MspI	CCGG	4 cut(s)	351, 574, 588, 1030
MspR9I	CCNGG	4 cut(s)	351, 575, 588, 913
Mva1269I	GAATGC	1 cut(s)	1039
MvaI	CCWGG	1 cut(s)	913
MwoI	GCNNNNNNNGC	5 cut(s)	413, 451, 492, 501, 1019
NciI	CCSGG	3 cut(s)	351, 575, 588
NlaIII	CATG	3 cut(s)	101, 602, 932
NlaIV	GGNNCC	1 cut(s)	360
NmuCI	GTSAC	2 cut(s)	12, 559
NsiI	ATGCAT	1 cut(s)	676
NspI	RCATGY	1 cut(s)	932
PceI	AGGCCT	1 cut(s)	416
PcsI	WCGNNNNNNNCGW	1 cut(s)	381
PctI	GAATGC	1 cut(s)	1039
PfeI	GAWTC	5 cut(s)	93, 171, 318, 397, 790
PleI	GAGTC	2 cut(s)	892, 1006
PpsI	GAGTC	2 cut(s)	892, 1006
Psp6I	CCWGG	1 cut(s)	911
PspGI	CCWGG	1 cut(s)	911
PspN4I	GGNNCC	1 cut(s)	360
PspPI	GGNCC	4 cut(s)	453, 488, 585, 1027
SaqAI	TTAA	2 cut(s)	933, 987
Sau96I	GGNCC	4 cut(s)	453, 488, 585, 1027
SchI	GAGTC	2 cut(s)	893, 1007
ScrFI	CCNGG	4 cut(s)	351, 575, 588, 913
SduI	GDGCHC	3 cut(s)	129, 409, 775
SfaNI	GCATC	1 cut(s)	328
SinI	GGWCC	2 cut(s)	488, 1027
SmlI	CTYRAG	2 cut(s)	410, 527
SmoI	CTYRAG	2 cut(s)	410, 527
Sse9I	AATT	5 cut(s)	256, 299, 799, 900, 937
SseBI	AGGCCT	1 cut(s)	416
SsiI	CCGC	3 cut(s)	388, 486, 495
StuI	AGGCCT	1 cut(s)	416
StyD4I	CCNGG	4 cut(s)	349, 573, 586, 911
TaaI	ACNGT	1 cut(s)	22
TaqI	TCGA	4 cut(s)	343, 375, 996, 1008
TasI	AATT	5 cut(s)	256, 299, 799, 900, 937
TfiI	GAWTC	5 cut(s)	93, 171, 318, 397, 790
Tru1I	TTAA	2 cut(s)	933, 987
Tru9I	TTAA	2 cut(s)	933, 987
TscAI	CASTG	1 cut(s)	913
TseFI	GTSAC	2 cut(s)	12, 559
Tsp45I	GTSAC	2 cut(s)	12, 559
TspDTI	ATGAA	1 cut(s)	587
TspRI	CASTG	1 cut(s)	913
VneI	GTGCAC	1 cut(s)	125
VpaK11BI	GGWCC	2 cut(s)	488, 1027
XapI	RAATTY	1 cut(s)	799
XceI	RCATGY	1 cut(s)	932
XmiI	GTMKAC	1 cut(s)	700
Zsp2I	ATGCAT	1 cut(s)	676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.