Pentatricopeptide repeat-containing protein At1g05670
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11630 AT1G61870 |
| fragaria_vesca | FvH4_3g02370 FvH4_3g02370 |
| malus_domestica | MD05G1343300.v1.1 MD10G1318400.v1.1 |
| prunus_persica | Prupe.1G264600_v2.0.a1 Prupe.4G023500_v2.0.a1 |
| pyrus_communis | pycom05g31280 pycom10g26970 |
| rosa_chinensis | RchiOBHm_Chr4g0403291 RchiOBHm_Chr5g0003601 |
| rosa_laevigata | RLG00000031155 |
| rosa_multiflora | Rmu_sc0001904.1_g000005 Rmu_sc0003948.1_g000005 Rmu_sc0004279.1_g000002 Rmu_sc0015897.1_g000005 Rmu_sc0028363.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00072370 |
| rosa_rugosa | Rorug04G0404900 Rorug05G0111800 |
| rosa_samantha | Rh4BG209100 Rh5AG031800 Rh5BG030600 Rh5CG034500 Rh5DG031300 |
| rosa_wichuraiana | Rw5G002960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 135 |
| AcsI | RAATTY | 1 cut(s) | 281 |
| AdeI | CACNNNGTG | 1 cut(s) | 17 |
| AfaI | GTAC | 2 cut(s) | 155, 252 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 125 |
| AluBI | AGCT | 1 cut(s) | 151 |
| AluI | AGCT | 1 cut(s) | 151 |
| ApoI | RAATTY | 1 cut(s) | 281 |
| BbvCI | CCTCAGC | 1 cut(s) | 288 |
| BfaI | CTAG | 1 cut(s) | 107 |
| BfmI | CTRYAG | 1 cut(s) | 54 |
| BmsI | GCATC | 1 cut(s) | 21 |
| Bpu10I | CCTNAGC | 2 cut(s) | 6, 288 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 190, 220 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 125 |
| Bse118I | RCCGGY | 1 cut(s) | 125 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseMII | CTCAG | 1 cut(s) | 279 |
| BsiSI | CCGG | 1 cut(s) | 126 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BsmI | GAATGC | 1 cut(s) | 108 |
| BspCNI | CTCAG | 1 cut(s) | 280 |
| BspHI | TCATGA | 1 cut(s) | 144 |
| BsrFI | RCCGGY | 1 cut(s) | 125 |
| BssAI | RCCGGY | 1 cut(s) | 125 |
| Bst4CI | ACNGT | 3 cut(s) | 17, 58, 248 |
| Bst6I | CTCTTC | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 1 cut(s) | 127 |
| BstDEI | CTNAG | 2 cut(s) | 6, 288 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 31 |
| BstNSI | RCATGY | 1 cut(s) | 205 |
| BstSFI | CTRYAG | 1 cut(s) | 54 |
| BtsIMutI | CAGTG | 3 cut(s) | 22, 76, 253 |
| Cac8I | GCNNGC | 1 cut(s) | 127 |
| CciI | TCATGA | 1 cut(s) | 144 |
| Cfr10I | RCCGGY | 1 cut(s) | 125 |
| Csp6I | GTAC | 2 cut(s) | 154, 251 |
| CviAII | CATG | 3 cut(s) | 145, 202, 318 |
| CviJI | RGCY | 3 cut(s) | 5, 46, 151 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 46, 151 |
| CviQI | GTAC | 2 cut(s) | 154, 251 |
| DdeI | CTNAG | 2 cut(s) | 6, 288 |
| DraIII | CACNNNGTG | 1 cut(s) | 17 |
| Eam1104I | CTCTTC | 1 cut(s) | 303 |
| EarI | CTCTTC | 1 cut(s) | 303 |
| FaeI | CATG | 3 cut(s) | 148, 205, 321 |
| FaiI | YATR | 9 cut(s) | 95, 135, 146, 173, 191, 195, 203, 306, 319 |
| FatI | CATG | 3 cut(s) | 144, 201, 317 |
| FspBI | CTAG | 1 cut(s) | 107 |
| HapII | CCGG | 1 cut(s) | 126 |
| Hin1II | CATG | 3 cut(s) | 148, 205, 321 |
| HpaII | CCGG | 1 cut(s) | 126 |
| Hpy166II | GTNNAC | 1 cut(s) | 251 |
| Hpy188III | TCNNGA | 2 cut(s) | 99, 145 |
| Hpy8I | GTNNAC | 1 cut(s) | 251 |
| HpyCH4III | ACNGT | 3 cut(s) | 17, 58, 248 |
| HpyCH4V | TGCA | 2 cut(s) | 159, 330 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 31 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 288 |
| Hsp92II | CATG | 3 cut(s) | 148, 205, 321 |
| KroI | GCCGGC | 1 cut(s) | 125 |
| KroNI | GCCGGC | 1 cut(s) | 127 |
| LmnI | GCTCC | 1 cut(s) | 198 |
| LpnPI | CCDG | 3 cut(s) | 84, 139, 195 |
| LweI | GCATC | 1 cut(s) | 21 |
| MaeI | CTAG | 1 cut(s) | 107 |
| MaeIII | GTNAC | 2 cut(s) | 61, 242 |
| MboII | GAAGA | 2 cut(s) | 122, 320 |
| MluCI | AATT | 2 cut(s) | 136, 281 |
| MnlI | CCTC | 2 cut(s) | 35, 283 |
| MroNI | GCCGGC | 1 cut(s) | 125 |
| MseI | TTAA | 2 cut(s) | 258, 270 |
| MspI | CCGG | 1 cut(s) | 126 |
| Mva1269I | GAATGC | 1 cut(s) | 108 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 31 |
| NaeI | GCCGGC | 1 cut(s) | 127 |
| NgoMIV | GCCGGC | 1 cut(s) | 125 |
| NlaIII | CATG | 3 cut(s) | 148, 205, 321 |
| NmuCI | GTSAC | 1 cut(s) | 61 |
| NspI | RCATGY | 1 cut(s) | 205 |
| PagI | TCATGA | 1 cut(s) | 144 |
| PctI | GAATGC | 1 cut(s) | 108 |
| PdiI | GCCGGC | 1 cut(s) | 127 |
| PsiI | TTATAA | 1 cut(s) | 135 |
| RsaI | GTAC | 2 cut(s) | 155, 252 |
| RsaNI | GTAC | 2 cut(s) | 154, 251 |
| SaqAI | TTAA | 2 cut(s) | 258, 270 |
| SetI | ASST | 2 cut(s) | 55, 153 |
| SfaNI | GCATC | 1 cut(s) | 21 |
| SfcI | CTRYAG | 1 cut(s) | 54 |
| Sse9I | AATT | 2 cut(s) | 136, 281 |
| SspMI | CTAG | 1 cut(s) | 107 |
| TaaI | ACNGT | 3 cut(s) | 17, 58, 248 |
| TaqI | TCGA | 1 cut(s) | 36 |
| TasI | AATT | 2 cut(s) | 136, 281 |
| TatI | WGTACW | 2 cut(s) | 153, 250 |
| Tru1I | TTAA | 2 cut(s) | 258, 270 |
| Tru9I | TTAA | 2 cut(s) | 258, 270 |
| TscAI | CASTG | 3 cut(s) | 22, 76, 253 |
| TseFI | GTSAC | 1 cut(s) | 61 |
| Tsp45I | GTSAC | 1 cut(s) | 61 |
| TspDTI | ATGAA | 3 cut(s) | 95, 161, 321 |
| TspRI | CASTG | 3 cut(s) | 22, 76, 253 |
| XapI | RAATTY | 1 cut(s) | 281 |
| XceI | RCATGY | 1 cut(s) | 205 |
| XspI | CTAG | 1 cut(s) | 107 |