Prupe.1G286200_v2.0.a1

Glucan endo-1,3-beta-glucosidase-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
28676971 .. 28679921
2951 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G286200.1

Sequence Viewer

Length: 621 bp
ATGGCTGCTTTAGTGTATATAGTGATTTTATTGGCCCTGACTGGCCATTCAAGTGCTACTTATTGCATATGTAAAGATGGAGTTGGTGACTCGGCCCTCCAGAAGGCACTGGATTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCCATCCTTCAAAGCGGTGCGTGTTACCAACCCAACACTATCAAAGATCACTGCAACTATGCTGTCAACAGCTATTTCCAAAGGAAGGGCCAAACTGCACAGAGCTGCGATTTTGCAGGCGCTGCTACACAGAGCCCAACTGCTCCAACATCAAGTTCCACTTCCACTTGTGTTTATCCTTCAAGTACCAGCCAAGCAGGAACTGGCTCTACAAACTCAACCACAACTCCAAGTACAACTCCAAGCACAACTCCGACAACAGGCACAACTCCAACCACAGGAACCACTCCAACCACGGGAACCACTCCAACCACAGGAACCACATCTCCCTCATCAGTGTTTGGGATAAGCCCCACCGGCAGTGGCAGCCTCACCGACAATACTGGTGGTGTGGCTTCTATGAAAGGCACAAACTGCTTGTTTTGCTCTCTGACTTCAACTCTCTTGTTCTCAGTGTTTTTGCTGCTGTGGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

207

Amino Acids

20.69

Weight (kDa)

5.97

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 159
AcoI YGGCCR 1 cut(s) 43
AfaI GTAC 2 cut(s) 331, 379
AfiI CCNNNNNNNGG 6 cut(s) 103, 229, 404, 422, 440, 458
AgsI TTSAA 4 cut(s) 51, 155, 327, 582
AjuI GAANNNNNNNTTGG 2 cut(s) 283, 315
AloI GAACNNNNNNTCC 2 cut(s) 454, 486
AluBI AGCT 4 cut(s) 128, 134, 216, 249
AluI AGCT 4 cut(s) 128, 134, 216, 249
AlwNI CAGNNNCTG 2 cut(s) 266, 347
AoxI GGCC 4 cut(s) 33, 43, 93, 232
ApeKI GCWGC 5 cut(s) 5, 249, 266, 510, 607
AspLEI GCGC 1 cut(s) 266
AspS9I GGNCC 3 cut(s) 34, 94, 232
AsuHPI GGTGA 2 cut(s) 98, 508
BalI TGGCCA 1 cut(s) 45
BanII GRGCYC 1 cut(s) 281
BbvI GCAGC 4 cut(s) 236, 253, 522, 594
BccI CCATC 2 cut(s) 71, 155
BfoI RGCGCY 1 cut(s) 267
BglI GCCNNNNNGGC 1 cut(s) 501
BisI GCNGC 5 cut(s) 6, 250, 267, 511, 608
BlsI GCNGC 5 cut(s) 7, 251, 268, 512, 609
BmgT120I GGNCC 3 cut(s) 34, 94, 232
BmiI GGNNCC 3 cut(s) 427, 445, 463
BpmI CTGGAG 2 cut(s) 83, 150
BsaJI CCNNGG 1 cut(s) 438
BsaXI ACNNNNNCTCC 4 cut(s) 355, 385, 454, 484
Bsc4I CCNNNNNNNGG 6 cut(s) 103, 229, 404, 422, 440, 458
Bse118I RCCGGY 1 cut(s) 500
Bse1I ACTGG 4 cut(s) 46, 114, 352, 532
BseDI CCNNGG 1 cut(s) 438
BseGI GGATG 1 cut(s) 147
BseLI CCNNNNNNNGG 6 cut(s) 103, 229, 404, 422, 440, 458
BseMII CTCAG 1 cut(s) 609
BseNI ACTGG 4 cut(s) 46, 114, 352, 532
BseXI GCAGC 4 cut(s) 236, 253, 522, 594
BsgI GTGCAG 1 cut(s) 225
BshFI GGCC 4 cut(s) 35, 45, 95, 234
BsiSI CCGG 1 cut(s) 501
BslI CCNNNNNNNGG 6 cut(s) 103, 229, 404, 422, 440, 458
BsnI GGCC 4 cut(s) 35, 45, 95, 234
Bsp1286I GDGCHC 1 cut(s) 281
Bsp143I GATC 1 cut(s) 190
BspACI CCGC 1 cut(s) 159
BspANI GGCC 4 cut(s) 35, 45, 95, 234
BspCNI CTCAG 1 cut(s) 608
BspLI GGNNCC 3 cut(s) 427, 445, 463
BsrFI RCCGGY 1 cut(s) 500
BsrI ACTGG 4 cut(s) 46, 114, 352, 532
BssAI RCCGGY 1 cut(s) 500
BssECI CCNNGG 1 cut(s) 438
BssMI GATC 1 cut(s) 190
Bst4CI ACNGT 1 cut(s) 140
BstAPI GCANNNNNTGC 2 cut(s) 266, 558
BstC8I GCNNGC 1 cut(s) 262
BstDEI CTNAG 1 cut(s) 595
BstDSI CCRYGG 1 cut(s) 438
BstENI CCTNNNNNAGG 1 cut(s) 101
BstF5I GGATG 1 cut(s) 147
BstH2I RGCGCY 1 cut(s) 267
BstHHI GCGC 1 cut(s) 266
BstKTI GATC 1 cut(s) 193
BstMBI GATC 1 cut(s) 190
BstMWI GCNNNNNNNGC 6 cut(s) 125, 266, 501, 510, 558, 567
BstV1I GCAGC 4 cut(s) 236, 253, 522, 594
BsuRI GGCC 4 cut(s) 35, 45, 95, 234
BtgI CCRYGG 1 cut(s) 438
BtsCI GGATG 1 cut(s) 147
BtsI GCAGTG 2 cut(s) 193, 511
BtsIMutI CAGTG 5 cut(s) 107, 193, 486, 511, 603
Cac8I GCNNGC 1 cut(s) 262
CaiI CAGNNNCTG 2 cut(s) 266, 347
CfoI GCGC 1 cut(s) 266
Cfr10I RCCGGY 1 cut(s) 500
Cfr13I GGNCC 3 cut(s) 34, 94, 232
Csp6I GTAC 2 cut(s) 330, 378
CspCI CAANNNNNGTGG 2 cut(s) 511, 546
CviQI GTAC 2 cut(s) 330, 378
DdeI CTNAG 1 cut(s) 595
DpnI GATC 1 cut(s) 192
DpnII GATC 1 cut(s) 190
EaeI YGGCCR 1 cut(s) 43
Eco24I GRGCYC 1 cut(s) 281
EcoNI CCTNNNNNAGG 1 cut(s) 101
EcoT38I GRGCYC 1 cut(s) 281
FaiI YATR 7 cut(s) 18, 20, 68, 70, 117, 204, 545
FalI AAGNNNNNCTT 4 cut(s) 43, 75, 289, 321
FauNDI CATATG 1 cut(s) 68
Fnu4HI GCNGC 5 cut(s) 6, 250, 267, 511, 608
FokI GGATG 1 cut(s) 134
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 5 cut(s) 6, 250, 267, 511, 608
GlaI GCGC 1 cut(s) 265
GluI GCNGC 5 cut(s) 6, 250, 267, 511, 608
GsuI CTGGAG 2 cut(s) 83, 150
HaeII RGCGCY 1 cut(s) 267
HaeIII GGCC 4 cut(s) 35, 45, 95, 234
HapII CCGG 1 cut(s) 501
HhaI GCGC 1 cut(s) 266
Hin6I GCGC 1 cut(s) 264
HinP1I GCGC 1 cut(s) 264
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HinfI GANTC 1 cut(s) 89
HpaII CCGG 1 cut(s) 501
HphI GGTGA 2 cut(s) 98, 508
Hpy166II GTNNAC 1 cut(s) 211
Hpy188I TCNGA 2 cut(s) 399, 576
Hpy188III TCNNGA 1 cut(s) 100
Hpy8I GTNNAC 1 cut(s) 211
HpyAV CCTTC 4 cut(s) 97, 161, 223, 333
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4V TGCA 4 cut(s) 66, 198, 242, 260
HpyF10VI GCNNNNNNNGC 6 cut(s) 125, 266, 501, 510, 558, 567
HpyF3I CTNAG 1 cut(s) 595
HspAI GCGC 1 cut(s) 264
Kzo9I GATC 1 cut(s) 190
LmnI GCTCC 3 cut(s) 125, 131, 292
Lsp1109I GCAGC 4 cut(s) 236, 253, 522, 594
MaeIII GTNAC 2 cut(s) 86, 167
MalI GATC 1 cut(s) 192
MboI GATC 1 cut(s) 190
MhlI GDGCHC 1 cut(s) 281
MlsI TGGCCA 1 cut(s) 45
MluNI TGGCCA 1 cut(s) 45
MlyI GAGTC 1 cut(s) 83
MmeI TCCRAC 5 cut(s) 314, 422, 440, 458, 476
MnlI CCTC 3 cut(s) 107, 484, 524
Mox20I TGGCCA 1 cut(s) 45
MscI TGGCCA 1 cut(s) 45
MslI CAYNNNNRTG 1 cut(s) 51
Msp20I TGGCCA 1 cut(s) 45
MspI CCGG 1 cut(s) 501
MwoI GCNNNNNNNGC 6 cut(s) 125, 266, 501, 510, 558, 567
NdeI CATATG 1 cut(s) 68
NdeII GATC 1 cut(s) 190
NlaIV GGNNCC 3 cut(s) 427, 445, 463
NmeAIII GCCGAG 1 cut(s) 71
NmuCI GTSAC 1 cut(s) 86
PkrI GCNGC 5 cut(s) 7, 251, 268, 512, 609
PleI GAGTC 1 cut(s) 83
PpsI GAGTC 1 cut(s) 83
PspN4I GGNNCC 3 cut(s) 427, 445, 463
PspPI GGNCC 3 cut(s) 34, 94, 232
PsrI GAACNNNNNNTAC 2 cut(s) 337, 369
PstNI CAGNNNCTG 2 cut(s) 266, 347
RsaI GTAC 2 cut(s) 331, 379
RsaNI GTAC 2 cut(s) 330, 378
RseI CAYNNNNRTG 1 cut(s) 51
SatI GCNGC 5 cut(s) 6, 250, 267, 511, 608
Sau3AI GATC 1 cut(s) 190
Sau96I GGNCC 3 cut(s) 34, 94, 232
SchI GAGTC 1 cut(s) 83
SduI GDGCHC 1 cut(s) 281
SetI ASST 4 cut(s) 130, 136, 218, 251
SmiMI CAYNNNNRTG 1 cut(s) 51
SsiI CCGC 1 cut(s) 159
TaaI ACNGT 1 cut(s) 140
TatI WGTACW 1 cut(s) 377
TscAI CASTG 5 cut(s) 114, 200, 486, 511, 603
TseFI GTSAC 1 cut(s) 86
TseI GCWGC 5 cut(s) 5, 249, 266, 510, 607
Tsp45I GTSAC 1 cut(s) 86
TspDTI ATGAA 1 cut(s) 560
TspRI CASTG 5 cut(s) 114, 200, 486, 511, 603
XagI CCTNNNNNAGG 1 cut(s) 101
XcmI CCANNNNNNNNNTGG 1 cut(s) 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.