Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0007655

Physical Location & Seq

Genomic Coordinates Reverse (-)

48539190 .. 48543168

Gene Structure 3979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0310200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCGGAGAAAGTGGAGAGGATGAGGGAATCAGTAGAGAAAGAAGGAGAAGAGTTGGAAAAAAAGAACAACCAGATGAATGAGAGAAAGGTTTCGTGGGCAAAGCTCCGGCGTGTAGACTCCCTCAATTTGGAGGCCGGAAGAGTTTCCATGACTCACAGCCACGGCTCACAGATGAGCTGGAGGAGGACGTTGAGTTTGGCATTTCAAAGCATTGGGATTATATATGGAGACATAGGGACGTCTCCTCTCTATGTGTATGCTAGCACTTTCACTGGTGGCATTGACAACAGTGAAGACATTATAGGGGTCTTGTCACTCATCATCTACACCATTGCACTCGTACCCATGCTCAAGTATGTGTTCATCGTCTTGTGGGCCAACGACAACGGCGATGGGGGAACATTTGCCCTGTATTCGTTGATATGCCGATATGCGAAGGTGAGTTTAATTCCGAATAACCAGTCAGAAGACACGCAGCTATCCAACTACAAGCTCGACTTGCCATCAAACGAATTGAAACGAGCCCAGAAGATTAAGAAGAAGCTGGAAAATAGTAAAATGGCTCAATACATACTCTTCACCGTCACCATTATGGGAACTTCCATGGTAATTGGAGATGGGGTTCTTACTCCATCCATTTCAGTTCTTTCTGCAGTGAGTGGAATCGACTCGTTAGGAAAAAATGCTGTCGTGGCGATTTCGGTAGCGATCTTGGTAGTTCTCTTCTCTGTTCAGCGATTCGGTACCGATAAAGTGGGGTTTACCTTTGCTCCTATAATCTTGGTGTGGTTCCTCTTCATCAGTGGCATTGGTCTTTACAACTTGTTCGTGCATGACATCGGTGTTCTTCGTGCTTTCAATCCAATGTGCATGGTTCAGTACTTCCAAAGAAACGGAAAAAAAGGATGGGTTTCCCTTGGGGGAATATTTCTCTGCATTACTGGCACCGAAGCCATGTTTGCTGATCTGGGTCACTTCAATGTCAAAGCAGTCCAAATCAGTTTCTCTTGCATTACATTTCCCGCGTTAATCACTGCATATAGTGGCCAAGCAGCATACCTCCGTAAGTTCCCTCTCGAGGTGGAGAAGACGTTCTACAACTCGATCCCAGATCCTTTGTACTGGCCAACCTTTGTTGTGGCCGTAGCTGCTGCCATTATTGCCAGCCAAGCTATGATTTCCGGGGCATTCGCAATAATCTCTCAGTCCCTTAGTCTCGGTTGTTTCCCACGAGTTAAGGTCGTTCACACCTCTGCTAAGTACGAAGGTCAAGTATACATACCTGAGGTTAACTATATGCTCATGATCGCTTGCGTGGTGGTCACTGCAGCCTTCAAGACTACAGAAAAGATTGGAAACGCTTATGGAATCGCAGTGGTCAGTGTGATGGTCATTACAACTGGTTTACTTACTCTAATTATGCTGGTAATATGGAAGACCAGCATATGGTTGATTGCTCTCTTCCTTGTGGGGTTTCTTTCAATCGAGGTCATCTATTTATCTTCAGTTATGTACAAATTCGTTCAAGGCGGGTTCCTTCCTCTGGTGTTTGCTTCATTCCTTATGGCAATCATGGCGATTTGGCATTATGTACACAAGAAAAGATACATGTTTGAGATCAACAACAAGGTTTCAAGCGAATACATGAGACAATTGGCCTCAAATCCCAACATTAACCGTGTGCCTGGAATTGGACTTCTCTATTCTGAGCTTGTCGAAGGAATTCCTCCTATATTTTCTCATTTTGTTTCCAATATACCCTCCATTCATTCAATTGTGGTAATTGTGTCTATCAAGTCCATTCCCCTCAGCAAAGTTGCAGTGGAGGAGAGGTTTCTGTTCCGACAGTTGGAGCCAAGAGAGTACCGAATGTTCCGTTGCGTAGCAAGATACGGTTACAATGACAGAATGGAGGGGCCAAAAGAGTTTGAGCAACAATTAATCGAGAATTTGAAGGAGTTTATTCGCCATAAACACTTTGTACTTGAAGGAGAAGCACCCGGGAATGGAGAAAAAACAGAGGAGCAAGTGGAAGCAGAGCAACAGCCTAACCATTCGTCTGCTTCCTCACCGTGGATTCAGTCATTCAATGCTGGTAGGTCAGCAAATTCGTCTAACCGGATTGTCCCTGTTCCAATCCGAGGGGCTGAAGAGGAAATGCAGTTTGTGCAAGCAGAAATGGAAAAAGGGATAGTATATCTGCTGGGAGAGACAGAAGTGGTTGCAGCAGAAAACGCATCTTTCTTCAAGAAGCTCATTGTCAACTATGTCTATGATTTCTTGAGGAAAAACTTTAGGCAAGGGCAGAATATAATGGCAATTCCAAGGTCTAGGCTTCTCAGAGTTGGAATGACCTATGAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

789

Amino Acids

88.41

Weight (kDa)

8.87

Isoelectric Point (pI)

33.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	67 - 548	2.6e-163	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	563 - 789	7.1e-25	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13830 AT1G13830 AT2G03505 AT2G03505 AT2G03505 AT2G03505
fragaria_vesca	FvH4_4g30140
malus_domestica	MD13G1063300.v1.1 MD13G1172000.v1.1 MD16G1061700.v1.1
prunus_persica	Prupe.1G286200_v2.0.a1
pyrus_communis	pycom13g05560 pycom16g05380
rosa_chinensis	RchiOBHm_Chr4g0438481
rosa_laevigata	RLG00000006360
rosa_multiflora	Rmu_sc0002327.1_g000020
rosa_roxburghii	Rroxscaffold_5G00379490
rosa_rugosa	Rorug04G0310200
rosa_samantha	Rh4AG361000 Rh4BG372300 Rh4CG386300 Rh4DG367100
rosa_wichuraiana	Rw0G006580 Rw0G016530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	245
Acc65I	GGTACC	1 cut(s)	746
AccB1I	GGYRCC	2 cut(s)	746, 947
AccB7I	CCANNNNNTGG	1 cut(s)	1449
AccI	GTMKAC	2 cut(s)	117, 1278
AccII	CGCG	1 cut(s)	1028
AciI	CCGC	3 cut(s)	5, 1026, 1533
AclWI	GGATC	2 cut(s)	1102, 1109
AcoI	YGGCCR	3 cut(s)	1048, 1127, 1143
AcsI	RAATTY	4 cut(s)	1520, 1725, 1951, 2110
AcuI	CTGAAG	2 cut(s)	1491, 2172
AcyI	GRCGYC	1 cut(s)	242
AfaI	GTAC	9 cut(s)	345, 748, 884, 1124, 1265, 1517, 1596, 1868, 1986
AfiI	CCNNNNNNNGG	9 cut(s)	130, 1081, 1449, 1546, 1694, 1852, 2009, 2076, 2144
AflIII	ACRYGT	1 cut(s)	1611
AjnI	CCWGG	1 cut(s)	1687
AloI	GAACNNNNNNTCC	4 cut(s)	609, 641, 1079, 1111
AluBI	AGCT	9 cut(s)	106, 180, 481, 496, 547, 1151, 1175, 1714, 2257
AluI	AGCT	9 cut(s)	106, 180, 481, 496, 547, 1151, 1175, 1714, 2257
Alw26I	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2207
AlwI	GGATC	2 cut(s)	1102, 1109
Ama87I	CYCGRG	2 cut(s)	1079, 2003
AoxI	GGCC	7 cut(s)	135, 378, 1048, 1127, 1143, 1659, 1919
ApeKI	GCWGC	6 cut(s)	478, 1055, 1151, 1154, 1331, 2228
ApoI	RAATTY	4 cut(s)	1520, 1725, 1951, 2110
ArsI	GACNNNNNNTTYG	4 cut(s)	181, 213, 449, 481
AseI	ATTAAT	1 cut(s)	1943
Asp700I	GAANNNNTTC	4 cut(s)	91, 145, 1094, 1725
Asp718I	GGTACC	1 cut(s)	746
AspS9I	GGNCC	2 cut(s)	378, 1919
AsuC2I	CCSGG	3 cut(s)	1186, 2004, 2005
AsuHPI	GGTGA	4 cut(s)	454, 574, 580, 2064
AsuNHI	GCTAGC	1 cut(s)	263
AvaI	CYCGRG	2 cut(s)	1079, 2003
AxyI	CCTNAGG	1 cut(s)	1287
BalI	TGGCCA	2 cut(s)	1050, 1129
BanI	GGYRCC	2 cut(s)	746, 947
BanII	GRGCYC	1 cut(s)	529
BarI	GAAGNNNNNNTAC	2 cut(s)	1082, 1114
BauI	CACGAG	1 cut(s)	1233
BbsI	GAAGAC	4 cut(s)	303, 477, 1097, 1445
BbvCI	CCTCAGC	1 cut(s)	1811
BbvI	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2240
BccI	CCATC	6 cut(s)	389, 514, 614, 643, 903, 1384
BceAI	ACGGC	3 cut(s)	181, 406, 1130
BciT130I	CCWGG	1 cut(s)	1689
BcnI	CCSGG	3 cut(s)	1186, 2004, 2005
BcoDI	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2207
BfaI	CTAG	2 cut(s)	264, 2334
BfmI	CTRYAG	3 cut(s)	654, 1329, 1344
BisI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2229
BlsI	GCNGC	6 cut(s)	480, 1057, 1153, 1156, 1333, 2230
BmcAI	AGTACT	1 cut(s)	884
Bme1390I	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
BmeT110I	CYCGRG	2 cut(s)	1079, 2003
BmgT120I	GGNCC	2 cut(s)	378, 1919
BmiI	GGNNCC	6 cut(s)	748, 794, 949, 1538, 1857, 1920
BmrFI	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
BmsI	GCATC	1 cut(s)	2249
BmtI	GCTAGC	1 cut(s)	267
BpiI	GAAGAC	4 cut(s)	303, 477, 1097, 1445
BpmI	CTGGAG	1 cut(s)	202
Bpu10I	CCTNAGC	1 cut(s)	1811
BpuEI	CTTGAG	2 cut(s)	338, 2305
BpuMI	CCSGG	3 cut(s)	1186, 2004, 2005
BsaHI	GRCGYC	1 cut(s)	242
BsaJI	CCNNGG	8 cut(s)	163, 606, 919, 1185, 2003, 2075, 2143, 2327
BsaWI	WCCGGW	1 cut(s)	2121
BsaXI	ACNNNNNCTCC	8 cut(s)	609, 639, 757, 787, 1079, 1109, 1820, 1850
Bsc4I	CCNNNNNNNGG	9 cut(s)	130, 1081, 1449, 1546, 1694, 1852, 2009, 2076, 2144
Bse1I	ACTGG	5 cut(s)	280, 463, 949, 1130, 1408
Bse21I	CCTNAGG	1 cut(s)	1287
Bse3DI	GCAATG	1 cut(s)	333
BseBI	CCWGG	1 cut(s)	1689
BseDI	CCNNGG	8 cut(s)	163, 606, 919, 1185, 2003, 2075, 2143, 2327
BseGI	GGATG	3 cut(s)	27, 635, 914
BseLI	CCNNNNNNNGG	9 cut(s)	130, 1081, 1449, 1546, 1694, 1852, 2009, 2076, 2144
BseMI	GCAATG	1 cut(s)	333
BseMII	CTCAG	5 cut(s)	1220, 1278, 1701, 1825, 2356
BseNI	ACTGG	5 cut(s)	280, 463, 949, 1130, 1408
BseRI	GAGGAG	4 cut(s)	199, 237, 1844, 2039
BseXI	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2240
BseYI	CCCAGC	1 cut(s)	2206
Bsh1236I	CGCG	1 cut(s)	1028
BshFI	GGCC	7 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921
BshNI	GGYRCC	2 cut(s)	746, 947
BsiHKCI	CYCGRG	2 cut(s)	1079, 2003
BsiSI	CCGG	5 cut(s)	109, 138, 1185, 2004, 2122
BslFI	GGGAC	3 cut(s)	253, 1195, 2114
BslI	CCNNNNNNNGG	9 cut(s)	130, 1081, 1449, 1546, 1694, 1852, 2009, 2076, 2144
BsmAI	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2207
BsmBI	CGTCTC	1 cut(s)	249
BsmFI	GGGAC	3 cut(s)	253, 1195, 2114
BsmI	GAATGC	1 cut(s)	1190
BsnI	GGCC	7 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921
BsoBI	CYCGRG	2 cut(s)	1079, 2003
Bsp1286I	GDGCHC	1 cut(s)	529
Bsp1407I	TGTACA	2 cut(s)	1515, 1594
Bsp143I	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
Bsp19I	CCATGG	1 cut(s)	606
BspACI	CCGC	3 cut(s)	5, 1026, 1533
BspANI	GGCC	7 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921
BspCNI	CTCAG	5 cut(s)	1219, 1279, 1702, 1824, 2355
BspFNI	CGCG	1 cut(s)	1028
BspHI	TCATGA	1 cut(s)	1305
BspLI	GGNNCC	6 cut(s)	748, 794, 949, 1538, 1857, 1920
BspMAI	CTGCAG	2 cut(s)	658, 1333
BspOI	GCTAGC	1 cut(s)	267
BspPI	GGATC	2 cut(s)	1102, 1109
BspT107I	GGYRCC	2 cut(s)	746, 947
BsrDI	GCAATG	1 cut(s)	333
BsrGI	TGTACA	2 cut(s)	1515, 1594
BsrI	ACTGG	5 cut(s)	280, 463, 949, 1130, 1408
BssECI	CCNNGG	8 cut(s)	163, 606, 919, 1185, 2003, 2075, 2143, 2327
BssMI	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
BssNAI	GTATAC	1 cut(s)	1279
BssNI	GRCGYC	1 cut(s)	242
BssSI	CACGAG	1 cut(s)	1233
BssT1I	CCWWGG	3 cut(s)	606, 919, 2327
Bst1107I	GTATAC	1 cut(s)	1279
Bst2BI	CACGAG	1 cut(s)	1233
Bst2UI	CCWGG	1 cut(s)	1689
Bst4CI	ACNGT	6 cut(s)	293, 586, 1682, 1851, 1898, 2076
Bst6I	CTCTTC	7 cut(s)	45, 136, 584, 731, 803, 1469, 2148
BstACI	GRCGYC	1 cut(s)	242
BstAPI	GCANNNNNTGC	1 cut(s)	2170
BstAUI	TGTACA	2 cut(s)	1515, 1594
BstC8I	GCNNGC	4 cut(s)	265, 1168, 1315, 2175
BstDEI	CTNAG	7 cut(s)	1206, 1214, 1260, 1287, 1710, 1811, 2342
BstDSI	CCRYGG	3 cut(s)	163, 606, 2075
BstF5I	GGATG	3 cut(s)	27, 635, 914
BstFNI	CGCG	1 cut(s)	1028
BstKTI	GATC	6 cut(s)	714, 970, 1110, 1117, 1311, 1623
BstMAI	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2207
BstMBI	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
BstNI	CCWGG	1 cut(s)	1689
BstNSI	RCATGY	1 cut(s)	1615
BstSCI	CCNGG	4 cut(s)	1184, 1687, 2002, 2003
BstSFI	CTRYAG	3 cut(s)	654, 1329, 1344
BstUI	CGCG	1 cut(s)	1028
BstV1I	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2240
BstV2I	GAAGAC	4 cut(s)	303, 477, 1097, 1445
BstX2I	RGATCY	1 cut(s)	1114
BstYI	RGATCY	1 cut(s)	1114
BstZ17I	GTATAC	1 cut(s)	1279
Bsu36I	CCTNAGG	1 cut(s)	1287
BsuRI	GGCC	7 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921
BtgI	CCRYGG	3 cut(s)	163, 606, 2075
BtgZI	GCGATG	1 cut(s)	408
BtsCI	GGATG	3 cut(s)	27, 635, 914
BtsI	GCAGTG	5 cut(s)	663, 1035, 1326, 1383, 1830
BtsIMutI	CAGTG	9 cut(s)	273, 298, 663, 811, 1035, 1326, 1383, 1390, 1830
Cac8I	GCNNGC	4 cut(s)	265, 1168, 1315, 2175
CciI	TCATGA	1 cut(s)	1305
Cfr13I	GGNCC	2 cut(s)	378, 1919
Cfr9I	CCCGGG	1 cut(s)	2003
Csp6I	GTAC	9 cut(s)	344, 747, 883, 1123, 1264, 1516, 1595, 1867, 1985
CviQI	GTAC	9 cut(s)	344, 747, 883, 1123, 1264, 1516, 1595, 1867, 1985
DdeI	CTNAG	7 cut(s)	1206, 1214, 1260, 1287, 1710, 1811, 2342
DpnI	GATC	6 cut(s)	713, 969, 1109, 1116, 1310, 1622
DpnII	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
EaeI	YGGCCR	3 cut(s)	1048, 1127, 1143
Eam1104I	CTCTTC	7 cut(s)	45, 136, 584, 731, 803, 1469, 2148
EarI	CTCTTC	7 cut(s)	45, 136, 584, 731, 803, 1469, 2148
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	606, 919, 2327
Eco24I	GRGCYC	1 cut(s)	529
Eco57I	CTGAAG	2 cut(s)	1491, 2172
Eco81I	CCTNAGG	1 cut(s)	1287
Eco88I	CYCGRG	2 cut(s)	1079, 2003
EcoRI	GAATTC	1 cut(s)	1725
EcoRII	CCWGG	1 cut(s)	1687
EcoT14I	CCWWGG	3 cut(s)	606, 919, 2327
EcoT38I	GRGCYC	1 cut(s)	529
ErhI	CCWWGG	3 cut(s)	606, 919, 2327
Esp3I	CGTCTC	1 cut(s)	249
FalI	AAGNNNNNCTT	2 cut(s)	485, 517
FaqI	GGGAC	3 cut(s)	253, 1195, 2114
FauI	CCCGC	2 cut(s)	1033, 1526
FauNDI	CATATG	1 cut(s)	1448
FblI	GTMKAC	2 cut(s)	117, 1278
Fnu4HI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2229
FokI	GGATG	3 cut(s)	34, 622, 921
FriOI	GRGCYC	1 cut(s)	529
Fsp4HI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2229
FspBI	CTAG	2 cut(s)	264, 2334
GluI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2229
GsaI	CCCAGC	1 cut(s)	2210
GsuI	CTGGAG	1 cut(s)	202
HaeIII	GGCC	7 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921
HapII	CCGG	5 cut(s)	109, 138, 1185, 2004, 2122
Hin1I	GRCGYC	1 cut(s)	242
HincII	GTYRAC	2 cut(s)	1294, 2266
HindII	GTYRAC	2 cut(s)	1294, 2266
HinfI	GANTC	8 cut(s)	29, 119, 154, 666, 671, 741, 1371, 2080
HpaI	GTTAAC	1 cut(s)	1294
HpaII	CCGG	5 cut(s)	109, 138, 1185, 2004, 2122
HphI	GGTGA	4 cut(s)	454, 574, 580, 2064
Hpy166II	GTNNAC	8 cut(s)	118, 765, 1249, 1279, 1294, 1409, 1597, 2266
Hpy188I	TCNGA	6 cut(s)	456, 469, 1711, 1847, 2144, 2345
Hpy188III	TCNNGA	6 cut(s)	1079, 1306, 1339, 1948, 2251, 2284
Hpy8I	GTNNAC	8 cut(s)	118, 765, 1249, 1279, 1294, 1409, 1597, 2266
HpyAV	CCTTC	8 cut(s)	38, 433, 1262, 1345, 1550, 1715, 1951, 1985
HpyCH4III	ACNGT	6 cut(s)	293, 586, 1682, 1851, 1898, 2076
HpyCH4IV	ACGT	3 cut(s)	191, 242, 1094
HpyF3I	CTNAG	7 cut(s)	1206, 1214, 1260, 1287, 1710, 1811, 2342
HpySE526I	ACGT	3 cut(s)	191, 242, 1094
Hsp92I	GRCGYC	1 cut(s)	242
KpnI	GGTACC	1 cut(s)	750
KspAI	GTTAAC	1 cut(s)	1294
Kzo9I	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
LmnI	GCTCC	4 cut(s)	111, 778, 1855, 2026
Lsp1109I	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2240
LweI	GCATC	1 cut(s)	2249
MaeI	CTAG	2 cut(s)	264, 2334
MaeII	ACGT	3 cut(s)	191, 242, 1094
MaeIII	GTNAC	5 cut(s)	315, 586, 974, 1324, 1898
MalI	GATC	6 cut(s)	713, 969, 1109, 1116, 1310, 1622
MboI	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
MfeI	CAATTG	2 cut(s)	1655, 1776
MflI	RGATCY	1 cut(s)	1114
MhlI	GDGCHC	1 cut(s)	529
MlsI	TGGCCA	2 cut(s)	1050, 1129
MluNI	TGGCCA	2 cut(s)	1050, 1129
MlyI	GAGTC	3 cut(s)	113, 148, 665
MmeI	TCCRAC	5 cut(s)	36, 510, 1833, 1870, 2329
Mox20I	TGGCCA	2 cut(s)	1050, 1129
MroXI	GAANNNNTTC	4 cut(s)	91, 145, 1094, 1725
MscI	TGGCCA	2 cut(s)	1050, 1129
MseI	TTAA	7 cut(s)	449, 537, 1031, 1239, 1293, 1677, 1943
MslI	CAYNNNNRTG	2 cut(s)	593, 981
Msp20I	TGGCCA	2 cut(s)	1050, 1129
MspI	CCGG	5 cut(s)	109, 138, 1185, 2004, 2122
MspR9I	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
MunI	CAATTG	2 cut(s)	1655, 1776
Mva1269I	GAATGC	1 cut(s)	1190
MvaI	CCWGG	1 cut(s)	1689
MvnI	CGCG	1 cut(s)	1028
NciI	CCSGG	3 cut(s)	1186, 2004, 2005
NcoI	CCATGG	1 cut(s)	606
NdeI	CATATG	1 cut(s)	1448
NdeII	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
NheI	GCTAGC	1 cut(s)	263
NlaIV	GGNNCC	6 cut(s)	748, 794, 949, 1538, 1857, 1920
NmuCI	GTSAC	4 cut(s)	315, 586, 974, 1324
NspI	RCATGY	1 cut(s)	1615
PaeR7I	CTCGAG	1 cut(s)	1079
PagI	TCATGA	1 cut(s)	1305
PciI	ACATGT	1 cut(s)	1611
PcsI	WCGNNNNNNNCGW	1 cut(s)	390
PctI	GAATGC	1 cut(s)	1190
PdmI	GAANNNNTTC	4 cut(s)	91, 145, 1094, 1725
PfeI	GAWTC	5 cut(s)	29, 666, 741, 1371, 2080
PflMI	CCANNNNNTGG	1 cut(s)	1449
PkrI	GCNGC	6 cut(s)	480, 1057, 1153, 1156, 1333, 2230
PleI	GAGTC	3 cut(s)	113, 148, 665
PpsI	GAGTC	3 cut(s)	113, 148, 665
PscI	ACATGT	1 cut(s)	1611
PshBI	ATTAAT	1 cut(s)	1943
Psp6I	CCWGG	1 cut(s)	1687
PspFI	CCCAGC	1 cut(s)	2206
PspGI	CCWGG	1 cut(s)	1687
PspN4I	GGNNCC	6 cut(s)	748, 794, 949, 1538, 1857, 1920
PspPI	GGNCC	2 cut(s)	378, 1919
PsrI	GAACNNNNNNTAC	2 cut(s)	1859, 1891
PstI	CTGCAG	2 cut(s)	658, 1333
PsuI	RGATCY	1 cut(s)	1114
RsaI	GTAC	9 cut(s)	345, 748, 884, 1124, 1265, 1517, 1596, 1868, 1986
RsaNI	GTAC	9 cut(s)	344, 747, 883, 1123, 1264, 1516, 1595, 1867, 1985
RseI	CAYNNNNRTG	2 cut(s)	593, 981
SaqAI	TTAA	7 cut(s)	449, 537, 1031, 1239, 1293, 1677, 1943
SatI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2229
Sau3AI	GATC	6 cut(s)	711, 967, 1107, 1114, 1308, 1620
Sau96I	GGNCC	2 cut(s)	378, 1919
ScaI	AGTACT	1 cut(s)	884
SchI	GAGTC	3 cut(s)	113, 148, 665
ScrFI	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
SduI	GDGCHC	1 cut(s)	529
SfaNI	GCATC	1 cut(s)	2249
SfcI	CTRYAG	3 cut(s)	654, 1329, 1344
Sfr274I	CTCGAG	1 cut(s)	1079
SlaI	CTCGAG	1 cut(s)	1079
SmaI	CCCGGG	1 cut(s)	2005
SmiMI	CAYNNNNRTG	2 cut(s)	593, 981
SmlI	CTYRAG	3 cut(s)	353, 1079, 2284
SmoI	CTYRAG	3 cut(s)	353, 1079, 2284
SsiI	CCGC	3 cut(s)	5, 1026, 1533
SspI	AATATT	1 cut(s)	930
SspMI	CTAG	2 cut(s)	264, 2334
StyD4I	CCNGG	4 cut(s)	1184, 1687, 2002, 2003
StyI	CCWWGG	3 cut(s)	606, 919, 2327
TaaI	ACNGT	6 cut(s)	293, 586, 1682, 1851, 1898, 2076
TaiI	ACGT	3 cut(s)	194, 245, 1097
TaqI	TCGA	7 cut(s)	498, 669, 1080, 1106, 1488, 1719, 1947
TatI	WGTACW	5 cut(s)	882, 1122, 1515, 1594, 1984
TfiI	GAWTC	5 cut(s)	29, 666, 741, 1371, 2080
Tru1I	TTAA	7 cut(s)	449, 537, 1031, 1239, 1293, 1677, 1943
Tru9I	TTAA	7 cut(s)	449, 537, 1031, 1239, 1293, 1677, 1943
TscAI	CASTG	9 cut(s)	280, 298, 663, 811, 1042, 1333, 1383, 1390, 1830
TseFI	GTSAC	4 cut(s)	315, 586, 974, 1324
TseI	GCWGC	6 cut(s)	478, 1055, 1151, 1154, 1331, 2228
Tsp45I	GTSAC	4 cut(s)	315, 586, 974, 1324
TspDTI	ATGAA	5 cut(s)	92, 355, 790, 1548, 1760
TspGWI	ACGGA	3 cut(s)	912, 1055, 1868
TspMI	CCCGGG	1 cut(s)	2003
TspRI	CASTG	9 cut(s)	280, 298, 663, 811, 1042, 1333, 1383, 1390, 1830
Van91I	CCANNNNNTGG	1 cut(s)	1449
VspI	ATTAAT	1 cut(s)	1943
XapI	RAATTY	4 cut(s)	1520, 1725, 1951, 2110
XceI	RCATGY	1 cut(s)	1615
XhoI	CTCGAG	1 cut(s)	1079
XmaI	CCCGGG	1 cut(s)	2003
XmiI	GTMKAC	2 cut(s)	117, 1278
XmnI	GAANNNNTTC	4 cut(s)	91, 145, 1094, 1725
XspI	CTAG	2 cut(s)	264, 2334
ZraI	GACGTC	1 cut(s)	243
ZrmI	AGTACT	1 cut(s)	884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.