tRNA(Adenine(34)) deaminase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68720 |
| fragaria_vesca | FvH4_4g28440 FvH4_4g28440 FvH4_4g28440 |
| malus_domestica | MD13G1050100.v1.1 MD13G1050300.v1.1 MD16G1051000.v1.1 |
| prunus_persica | Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1 |
| pyrus_communis | pycom13g04440 pycom16g04480 |
| rosa_chinensis | RchiOBHm_Chr4g0436391 RchiOBHm_Chr4g0436401 |
| rosa_laevigata | RLG00000006522 |
| rosa_multiflora | Rmu_co8246795.1_g000001 Rmu_co8256611.1_g000001 Rmu_sc0010255.1_g000001 Rmu_sc0016929.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00377560 |
| rosa_rugosa | Rorug04G0293500 |
| rosa_samantha | Rh4AG347800 Rh4BG356600 Rh4CG371200 |
| rosa_wichuraiana | Rw4G030410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1694 |
| Acc36I | ACCTGC | 4 cut(s) | 1102, 3174, 3473, 4407 |
| AccB1I | GGYRCC | 1 cut(s) | 3946 |
| AccI | GTMKAC | 2 cut(s) | 364, 3857 |
| AccII | CGCG | 1 cut(s) | 3854 |
| AccIII | TCCGGA | 2 cut(s) | 2450, 4228 |
| AciI | CCGC | 6 cut(s) | 268, 2561, 3534, 4091, 4409, 4413 |
| AclWI | GGATC | 5 cut(s) | 1335, 1348, 2410, 3016, 3369 |
| AcoI | YGGCCR | 3 cut(s) | 888, 1887, 3319 |
| AcsI | RAATTY | 8 cut(s) | 640, 1454, 1492, 1863, 2457, 2839, 2992, 3675 |
| AcvI | CACGTG | 1 cut(s) | 3992 |
| AcyI | GRCGYC | 1 cut(s) | 1691 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 295, 314, 1057, 1536, 1982 |
| AflIII | ACRYGT | 1 cut(s) | 3852 |
| AgeI | ACCGGT | 1 cut(s) | 276 |
| AjiI | CACGTC | 2 cut(s) | 368, 4418 |
| AjnI | CCWGG | 6 cut(s) | 1511, 1731, 2788, 2797, 3403, 3685 |
| AleI | CACNNNNGTG | 2 cut(s) | 1748, 4169 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 964, 996 |
| Alw21I | GWGCWC | 1 cut(s) | 4183 |
| AlwI | GGATC | 5 cut(s) | 1335, 1348, 2410, 3016, 3369 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2635, 2702, 2948 |
| Aor13HI | TCCGGA | 2 cut(s) | 2450, 4228 |
| AoxI | GGCC | 9 cut(s) | 265, 888, 1048, 1332, 1887, 2223, 3074, 3319, 3957 |
| ApeKI | GCWGC | 6 cut(s) | 2144, 2407, 3397, 3929, 4209, 4274 |
| ApoI | RAATTY | 8 cut(s) | 640, 1454, 1492, 1863, 2457, 2839, 2992, 3675 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1363, 1395 |
| AseI | ATTAAT | 1 cut(s) | 2820 |
| AsiGI | ACCGGT | 1 cut(s) | 276 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3277, 4355 |
| AspA2I | CCTAGG | 1 cut(s) | 1546 |
| AspLEI | GCGC | 2 cut(s) | 330, 876 |
| AspS9I | GGNCC | 8 cut(s) | 265, 274, 1515, 2056, 2224, 3074, 3727, 3957 |
| AsuC2I | CCSGG | 1 cut(s) | 290 |
| AsuHPI | GGTGA | 4 cut(s) | 431, 449, 3563, 4424 |
| AsuII | TTCGAA | 2 cut(s) | 869, 3233 |
| AvaII | GGWCC | 4 cut(s) | 274, 1515, 2056, 3727 |
| AvrII | CCTAGG | 1 cut(s) | 1546 |
| BaeGI | GKGCMC | 1 cut(s) | 189 |
| BamHI | GGATCC | 1 cut(s) | 1340 |
| BanI | GGYRCC | 1 cut(s) | 3946 |
| BanII | GRGCYC | 1 cut(s) | 4183 |
| BbrPI | CACGTG | 1 cut(s) | 3992 |
| BbsI | GAAGAC | 5 cut(s) | 1229, 1313, 3339, 3537, 3855 |
| Bbv12I | GWGCWC | 1 cut(s) | 4183 |
| BbvI | GCAGC | 6 cut(s) | 2131, 2394, 3384, 3916, 4221, 4261 |
| BceAI | ACGGC | 4 cut(s) | 1902, 3306, 3944, 4264 |
| BciT130I | CCWGG | 6 cut(s) | 1513, 1733, 2790, 2799, 3405, 3687 |
| BclI | TGATCA | 1 cut(s) | 3391 |
| BcnI | CCSGG | 1 cut(s) | 290 |
| BfaI | CTAG | 9 cut(s) | 918, 984, 1446, 1547, 2064, 2280, 2316, 2397, 4004 |
| BfmI | CTRYAG | 1 cut(s) | 1185 |
| BfoI | RGCGCY | 2 cut(s) | 331, 877 |
| BfuAI | ACCTGC | 4 cut(s) | 1102, 3174, 3473, 4407 |
| BisI | GCNGC | 8 cut(s) | 268, 2145, 2408, 3398, 3534, 3930, 4210, 4275 |
| BlnI | CCTAGG | 1 cut(s) | 1546 |
| BlsI | GCNGC | 8 cut(s) | 269, 2146, 2409, 3399, 3535, 3931, 4211, 4276 |
| BmcAI | AGTACT | 1 cut(s) | 2746 |
| Bme1390I | CCNGG | 7 cut(s) | 290, 1513, 1733, 2790, 2799, 3405, 3687 |
| Bme18I | GGWCC | 4 cut(s) | 274, 1515, 2056, 3727 |
| BmgBI | CACGTC | 2 cut(s) | 368, 4418 |
| BmgT120I | GGNCC | 8 cut(s) | 265, 274, 1515, 2056, 2224, 3074, 3727, 3957 |
| BmrFI | CCNGG | 7 cut(s) | 290, 1513, 1733, 2790, 2799, 3405, 3687 |
| BmrI | ACTGGG | 1 cut(s) | 322 |
| BmsI | GCATC | 7 cut(s) | 439, 2147, 2300, 2578, 2821, 4337, 4449 |
| BmuI | ACTGGG | 1 cut(s) | 322 |
| BpiI | GAAGAC | 5 cut(s) | 1229, 1313, 3339, 3537, 3855 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1964, 1996, 4131, 4163 |
| BpmI | CTGGAG | 5 cut(s) | 563, 2460, 2781, 3075, 4158 |
| Bpu14I | TTCGAA | 2 cut(s) | 869, 3233 |
| BpuEI | CTTGAG | 7 cut(s) | 7, 30, 1076, 1636, 2997, 3025, 3576 |
| BpuMI | CCSGG | 1 cut(s) | 290 |
| BsaAI | YACGTR | 1 cut(s) | 3992 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4307 |
| BsaHI | GRCGYC | 1 cut(s) | 1691 |
| BsaI | GGTCTC | 3 cut(s) | 57, 1519, 3663 |
| BsaJI | CCNNGG | 9 cut(s) | 453, 1386, 1546, 2788, 2789, 2798, 3069, 3126, 3456 |
| BsaWI | WCCGGW | 3 cut(s) | 276, 2450, 4228 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 604, 634, 667, 697, 727, 757, 768, 798 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 295, 314, 1057, 1536, 1982 |
| Bse118I | RCCGGY | 1 cut(s) | 276 |
| Bse1I | ACTGG | 7 cut(s) | 317, 546, 2058, 2242, 2539, 3184, 3969 |
| Bse3DI | GCAATG | 1 cut(s) | 2370 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4307 |
| BseAI | TCCGGA | 2 cut(s) | 2450, 4228 |
| BseBI | CCWGG | 6 cut(s) | 1513, 1733, 2790, 2799, 3405, 3687 |
| BseDI | CCNNGG | 9 cut(s) | 453, 1386, 1546, 2788, 2789, 2798, 3069, 3126, 3456 |
| BseGI | GGATG | 8 cut(s) | 1820, 1996, 2436, 3100, 4001, 4237, 4308, 4435 |
| BseJI | GATNNNNATC | 1 cut(s) | 4307 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 295, 314, 1057, 1536, 1982 |
| BseMI | GCAATG | 1 cut(s) | 2370 |
| BseMII | CTCAG | 9 cut(s) | 478, 1296, 1748, 1995, 2280, 2453, 2883, 3815, 4358 |
| BseNI | ACTGG | 7 cut(s) | 317, 546, 2058, 2242, 2539, 3184, 3969 |
| BseRI | GAGGAG | 7 cut(s) | 506, 677, 688, 748, 2744, 2747, 3447 |
| BseSI | GKGCMC | 1 cut(s) | 189 |
| BseXI | GCAGC | 6 cut(s) | 2131, 2394, 3384, 3916, 4221, 4261 |
| BseYI | CCCAGC | 1 cut(s) | 3257 |
| BsgI | GTGCAG | 3 cut(s) | 1589, 2393, 4359 |
| Bsh1236I | CGCG | 1 cut(s) | 3854 |
| BshFI | GGCC | 9 cut(s) | 267, 890, 1050, 1334, 1889, 2225, 3076, 3321, 3959 |
| BshNI | GGYRCC | 1 cut(s) | 3946 |
| BshTI | ACCGGT | 1 cut(s) | 276 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4183 |
| BsiSI | CCGG | 4 cut(s) | 277, 289, 2451, 4229 |
| BslFI | GGGAC | 3 cut(s) | 287, 1501, 2806 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 295, 314, 1057, 1536, 1982 |
| BsmBI | CGTCTC | 1 cut(s) | 3501 |
| BsmFI | GGGAC | 3 cut(s) | 287, 1501, 2806 |
| BsmI | GAATGC | 3 cut(s) | 1291, 3166, 3241 |
| BsnI | GGCC | 9 cut(s) | 267, 890, 1050, 1334, 1889, 2225, 3076, 3321, 3959 |
| Bso31I | GGTCTC | 3 cut(s) | 57, 1519, 3663 |
| Bsp119I | TTCGAA | 2 cut(s) | 869, 3233 |
| Bsp1286I | GDGCHC | 2 cut(s) | 189, 4183 |
| Bsp13I | TCCGGA | 2 cut(s) | 2450, 4228 |
| Bsp1407I | TGTACA | 1 cut(s) | 1077 |
| Bsp143I | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| Bsp19I | CCATGG | 1 cut(s) | 3126 |
| BspACI | CCGC | 6 cut(s) | 268, 2561, 3534, 4091, 4409, 4413 |
| BspANI | GGCC | 9 cut(s) | 267, 890, 1050, 1334, 1889, 2225, 3076, 3321, 3959 |
| BspCNI | CTCAG | 9 cut(s) | 477, 1295, 1749, 1994, 2279, 2452, 2884, 3816, 4359 |
| BspEI | TCCGGA | 2 cut(s) | 2450, 4228 |
| BspFNI | CGCG | 1 cut(s) | 3854 |
| BspMAI | CTGCAG | 1 cut(s) | 1189 |
| BspMI | ACCTGC | 4 cut(s) | 1102, 3174, 3473, 4407 |
| BspPI | GGATC | 5 cut(s) | 1335, 1348, 2410, 3016, 3369 |
| BspT104I | TTCGAA | 2 cut(s) | 869, 3233 |
| BspT107I | GGYRCC | 1 cut(s) | 3946 |
| BspTNI | GGTCTC | 3 cut(s) | 57, 1519, 3663 |
| BsrDI | GCAATG | 1 cut(s) | 2370 |
| BsrFI | RCCGGY | 1 cut(s) | 276 |
| BsrGI | TGTACA | 1 cut(s) | 1077 |
| BsrI | ACTGG | 7 cut(s) | 317, 546, 2058, 2242, 2539, 3184, 3969 |
| BssAI | RCCGGY | 1 cut(s) | 276 |
| BssECI | CCNNGG | 9 cut(s) | 453, 1386, 1546, 2788, 2789, 2798, 3069, 3126, 3456 |
| BssMI | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| BssNAI | GTATAC | 1 cut(s) | 3858 |
| BssNI | GRCGYC | 1 cut(s) | 1691 |
| BssT1I | CCWWGG | 5 cut(s) | 1386, 1546, 3069, 3126, 3456 |
| Bst1107I | GTATAC | 1 cut(s) | 3858 |
| Bst2UI | CCWGG | 6 cut(s) | 1513, 1733, 2790, 2799, 3405, 3687 |
| Bst6I | CTCTTC | 8 cut(s) | 594, 644, 654, 725, 924, 1116, 1517, 2102 |
| BstACI | GRCGYC | 1 cut(s) | 1691 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2144 |
| BstAUI | TGTACA | 1 cut(s) | 1077 |
| BstBAI | YACGTR | 1 cut(s) | 3992 |
| BstBI | TTCGAA | 2 cut(s) | 869, 3233 |
| BstC8I | GCNNGC | 7 cut(s) | 247, 1603, 4089, 4272, 4392, 4404, 4413 |
| BstDSI | CCRYGG | 1 cut(s) | 3126 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| BstF5I | GGATG | 8 cut(s) | 1820, 1996, 2436, 3100, 4001, 4237, 4308, 4435 |
| BstFNI | CGCG | 1 cut(s) | 3854 |
| BstH2I | RGCGCY | 2 cut(s) | 331, 877 |
| BstHHI | GCGC | 2 cut(s) | 330, 876 |
| BstKTI | GATC | 8 cut(s) | 261, 442, 1343, 1809, 2405, 3011, 3364, 3394 |
| BstMBI | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 2144, 3926, 4408, 4412 |
| BstNI | CCWGG | 6 cut(s) | 1513, 1733, 2790, 2799, 3405, 3687 |
| BstNSI | RCATGY | 1 cut(s) | 3373 |
| BstSCI | CCNGG | 7 cut(s) | 288, 1511, 1731, 2788, 2797, 3403, 3685 |
| BstSFI | CTRYAG | 1 cut(s) | 1185 |
| BstSLI | GKGCMC | 1 cut(s) | 189 |
| BstUI | CGCG | 1 cut(s) | 3854 |
| BstV1I | GCAGC | 6 cut(s) | 2131, 2394, 3384, 3916, 4221, 4261 |
| BstV2I | GAAGAC | 5 cut(s) | 1229, 1313, 3339, 3537, 3855 |
| BstX2I | RGATCY | 2 cut(s) | 1340, 3008 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1430 |
| BstYI | RGATCY | 2 cut(s) | 1340, 3008 |
| BstZ17I | GTATAC | 1 cut(s) | 3858 |
| BsuRI | GGCC | 9 cut(s) | 267, 890, 1050, 1334, 1889, 2225, 3076, 3321, 3959 |
| BtgI | CCRYGG | 1 cut(s) | 3126 |
| BtgZI | GCGATG | 1 cut(s) | 3612 |
| BtrI | CACGTC | 2 cut(s) | 368, 4418 |
| BtsCI | GGATG | 8 cut(s) | 1820, 1996, 2436, 3100, 4001, 4237, 4308, 4435 |
| BtsI | GCAGTG | 2 cut(s) | 2779, 3908 |
| BveI | ACCTGC | 4 cut(s) | 1102, 3174, 3473, 4407 |
| Cac8I | GCNNGC | 7 cut(s) | 247, 1603, 4089, 4272, 4392, 4404, 4413 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2635, 2702, 2948 |
| CfoI | GCGC | 2 cut(s) | 330, 876 |
| Cfr10I | RCCGGY | 1 cut(s) | 276 |
| Cfr13I | GGNCC | 8 cut(s) | 265, 274, 1515, 2056, 2224, 3074, 3727, 3957 |
| CseI | GACGC | 2 cut(s) | 1688, 3860 |
| CsiI | ACCWGGT | 1 cut(s) | 3403 |
| CspAI | ACCGGT | 1 cut(s) | 276 |
| DpnI | GATC | 8 cut(s) | 260, 441, 1342, 1808, 2404, 3010, 3363, 3393 |
| DpnII | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| DraI | TTTAAA | 2 cut(s) | 1629, 2838 |
| EaeI | YGGCCR | 3 cut(s) | 888, 1887, 3319 |
| Eam1104I | CTCTTC | 8 cut(s) | 594, 644, 654, 725, 924, 1116, 1517, 2102 |
| EarI | CTCTTC | 8 cut(s) | 594, 644, 654, 725, 924, 1116, 1517, 2102 |
| Ecl136II | GAGCTC | 1 cut(s) | 4181 |
| Eco130I | CCWWGG | 5 cut(s) | 1386, 1546, 3069, 3126, 3456 |
| Eco147I | AGGCCT | 1 cut(s) | 1334 |
| Eco24I | GRGCYC | 1 cut(s) | 4183 |
| Eco31I | GGTCTC | 3 cut(s) | 57, 1519, 3663 |
| Eco47I | GGWCC | 4 cut(s) | 274, 1515, 2056, 3727 |
| Eco53kI | GAGCTC | 1 cut(s) | 4181 |
| Eco72I | CACGTG | 1 cut(s) | 3992 |
| EcoICRI | GAGCTC | 1 cut(s) | 4181 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3074 |
| EcoRI | GAATTC | 2 cut(s) | 640, 2992 |
| EcoRII | CCWGG | 6 cut(s) | 1511, 1731, 2788, 2797, 3403, 3685 |
| EcoT14I | CCWWGG | 5 cut(s) | 1386, 1546, 3069, 3126, 3456 |
| EcoT22I | ATGCAT | 3 cut(s) | 1293, 4052, 4464 |
| EcoT38I | GRGCYC | 1 cut(s) | 4183 |
| ErhI | CCWWGG | 5 cut(s) | 1386, 1546, 3069, 3126, 3456 |
| Esp3I | CGTCTC | 1 cut(s) | 3501 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 39, 71, 4343, 4375 |
| FaqI | GGGAC | 3 cut(s) | 287, 1501, 2806 |
| FauI | CCCGC | 1 cut(s) | 4420 |
| FbaI | TGATCA | 1 cut(s) | 3391 |
| FblI | GTMKAC | 2 cut(s) | 364, 3857 |
| Fnu4HI | GCNGC | 8 cut(s) | 268, 2145, 2408, 3398, 3534, 3930, 4210, 4275 |
| FokI | GGATG | 8 cut(s) | 1827, 2003, 2443, 3107, 4008, 4244, 4295, 4422 |
| FriOI | GRGCYC | 1 cut(s) | 4183 |
| Fsp4HI | GCNGC | 8 cut(s) | 268, 2145, 2408, 3398, 3534, 3930, 4210, 4275 |
| FspBI | CTAG | 9 cut(s) | 918, 984, 1446, 1547, 2064, 2280, 2316, 2397, 4004 |
| GlaI | GCGC | 2 cut(s) | 329, 875 |
| GluI | GCNGC | 8 cut(s) | 268, 2145, 2408, 3398, 3534, 3930, 4210, 4275 |
| GsaI | CCCAGC | 1 cut(s) | 3261 |
| GsuI | CTGGAG | 5 cut(s) | 563, 2460, 2781, 3075, 4158 |
| HaeII | RGCGCY | 2 cut(s) | 331, 877 |
| HaeIII | GGCC | 9 cut(s) | 267, 890, 1050, 1334, 1889, 2225, 3076, 3321, 3959 |
| HapII | CCGG | 4 cut(s) | 277, 289, 2451, 4229 |
| HgaI | GACGC | 2 cut(s) | 1688, 3860 |
| HhaI | GCGC | 2 cut(s) | 330, 876 |
| Hin1I | GRCGYC | 1 cut(s) | 1691 |
| Hin6I | GCGC | 2 cut(s) | 328, 874 |
| HinP1I | GCGC | 2 cut(s) | 328, 874 |
| HincII | GTYRAC | 3 cut(s) | 174, 1822, 2421 |
| HindII | GTYRAC | 3 cut(s) | 174, 1822, 2421 |
| HindIII | AAGCTT | 2 cut(s) | 3800, 4190 |
| HpaII | CCGG | 4 cut(s) | 277, 289, 2451, 4229 |
| HphI | GGTGA | 4 cut(s) | 431, 449, 3563, 4424 |
| Hpy99I | CGWCG | 1 cut(s) | 4317 |
| HpyCH4IV | ACGT | 4 cut(s) | 367, 1691, 3991, 4417 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 2144, 3926, 4408, 4412 |
| HpySE526I | ACGT | 4 cut(s) | 367, 1691, 3991, 4417 |
| Hsp92I | GRCGYC | 1 cut(s) | 1691 |
| HspAI | GCGC | 2 cut(s) | 328, 874 |
| Kpn2I | TCCGGA | 2 cut(s) | 2450, 4228 |
| Ksp22I | TGATCA | 1 cut(s) | 3391 |
| Kzo9I | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| LmnI | GCTCC | 8 cut(s) | 341, 2273, 2763, 4139, 4178, 4186, 4199, 4282 |
| Lsp1109I | GCAGC | 6 cut(s) | 2131, 2394, 3384, 3916, 4221, 4261 |
| LweI | GCATC | 7 cut(s) | 439, 2147, 2300, 2578, 2821, 4337, 4449 |
| MabI | ACCWGGT | 1 cut(s) | 3403 |
| MaeI | CTAG | 9 cut(s) | 918, 984, 1446, 1547, 2064, 2280, 2316, 2397, 4004 |
| MaeII | ACGT | 4 cut(s) | 367, 1691, 3991, 4417 |
| MalI | GATC | 8 cut(s) | 260, 441, 1342, 1808, 2404, 3010, 3363, 3393 |
| MboI | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| MfeI | CAATTG | 3 cut(s) | 894, 1696, 2387 |
| MflI | RGATCY | 2 cut(s) | 1340, 3008 |
| MhlI | GDGCHC | 2 cut(s) | 189, 4183 |
| MluI | ACGCGT | 1 cut(s) | 3852 |
| MlyI | GAGTC | 6 cut(s) | 313, 1973, 2258, 2426, 2788, 3032 |
| MmeI | TCCRAC | 1 cut(s) | 4336 |
| Mph1103I | ATGCAT | 3 cut(s) | 1293, 4052, 4464 |
| MroI | TCCGGA | 2 cut(s) | 2450, 4228 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3277, 4355 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1140, 1748, 2970, 3994, 4169, 4333 |
| MspA1I | CMGCKG | 6 cut(s) | 1601, 2144, 3397, 4212, 4274, 4366 |
| MspI | CCGG | 4 cut(s) | 277, 289, 2451, 4229 |
| MspR9I | CCNGG | 7 cut(s) | 290, 1513, 1733, 2790, 2799, 3405, 3687 |
| MunI | CAATTG | 3 cut(s) | 894, 1696, 2387 |
| Mva1269I | GAATGC | 3 cut(s) | 1291, 3166, 3241 |
| MvaI | CCWGG | 6 cut(s) | 1513, 1733, 2790, 2799, 3405, 3687 |
| MvnI | CGCG | 1 cut(s) | 3854 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 2144, 3926, 4408, 4412 |
| NciI | CCSGG | 1 cut(s) | 290 |
| NcoI | CCATGG | 1 cut(s) | 3126 |
| NdeII | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| NmeAIII | GCCGAG | 2 cut(s) | 478, 2575 |
| NmuCI | GTSAC | 3 cut(s) | 1846, 1868, 3145 |
| NsiI | ATGCAT | 3 cut(s) | 1293, 4052, 4464 |
| NspI | RCATGY | 1 cut(s) | 3373 |
| NspV | TTCGAA | 2 cut(s) | 869, 3233 |
| OliI | CACNNNNGTG | 2 cut(s) | 1748, 4169 |
| PasI | CCCWGGG | 1 cut(s) | 2789 |
| PceI | AGGCCT | 1 cut(s) | 1334 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 450 |
| PctI | GAATGC | 3 cut(s) | 1291, 3166, 3241 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3277, 4355 |
| PinAI | ACCGGT | 1 cut(s) | 276 |
| PkrI | GCNGC | 8 cut(s) | 269, 2146, 2409, 3399, 3535, 3931, 4211, 4276 |
| PleI | GAGTC | 6 cut(s) | 312, 1972, 2258, 2425, 2788, 3032 |
| PmaCI | CACGTG | 1 cut(s) | 3992 |
| PmlI | CACGTG | 1 cut(s) | 3992 |
| PpsI | GAGTC | 6 cut(s) | 312, 1972, 2258, 2425, 2788, 3032 |
| Ppu21I | YACGTR | 1 cut(s) | 3992 |
| PshBI | ATTAAT | 1 cut(s) | 2820 |
| Psp124BI | GAGCTC | 1 cut(s) | 4183 |
| Psp6I | CCWGG | 6 cut(s) | 1511, 1731, 2788, 2797, 3403, 3685 |
| PspCI | CACGTG | 1 cut(s) | 3992 |
| PspFI | CCCAGC | 1 cut(s) | 3257 |
| PspGI | CCWGG | 6 cut(s) | 1511, 1731, 2788, 2797, 3403, 3685 |
| PspPI | GGNCC | 8 cut(s) | 265, 274, 1515, 2056, 2224, 3074, 3727, 3957 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 835, 867 |
| PstI | CTGCAG | 1 cut(s) | 1189 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2635, 2702, 2948 |
| PsuI | RGATCY | 2 cut(s) | 1340, 3008 |
| PvuII | CAGCTG | 6 cut(s) | 1601, 2144, 3397, 4212, 4274, 4366 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1140, 1748, 2970, 3994, 4169, 4333 |
| SacI | GAGCTC | 1 cut(s) | 4183 |
| SatI | GCNGC | 8 cut(s) | 268, 2145, 2408, 3398, 3534, 3930, 4210, 4275 |
| Sau3AI | GATC | 8 cut(s) | 258, 439, 1340, 1806, 2402, 3008, 3361, 3391 |
| Sau96I | GGNCC | 8 cut(s) | 265, 274, 1515, 2056, 2224, 3074, 3727, 3957 |
| ScaI | AGTACT | 1 cut(s) | 2746 |
| SchI | GAGTC | 6 cut(s) | 313, 1973, 2258, 2426, 2788, 3032 |
| ScrFI | CCNGG | 7 cut(s) | 290, 1513, 1733, 2790, 2799, 3405, 3687 |
| SduI | GDGCHC | 2 cut(s) | 189, 4183 |
| SexAI | ACCWGGT | 1 cut(s) | 3403 |
| SfaNI | GCATC | 7 cut(s) | 439, 2147, 2300, 2578, 2821, 4337, 4449 |
| SfcI | CTRYAG | 1 cut(s) | 1185 |
| SfuI | TTCGAA | 2 cut(s) | 869, 3233 |
| SinI | GGWCC | 4 cut(s) | 274, 1515, 2056, 3727 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1140, 1748, 2970, 3994, 4169, 4333 |
| SmlI | CTYRAG | 7 cut(s) | 22, 45, 1055, 1651, 3012, 3040, 3591 |
| SmoI | CTYRAG | 7 cut(s) | 22, 45, 1055, 1651, 3012, 3040, 3591 |
| SseBI | AGGCCT | 1 cut(s) | 1334 |
| SsiI | CCGC | 6 cut(s) | 268, 2561, 3534, 4091, 4409, 4413 |
| SspI | AATATT | 1 cut(s) | 3199 |
| SspMI | CTAG | 9 cut(s) | 918, 984, 1446, 1547, 2064, 2280, 2316, 2397, 4004 |
| SstI | GAGCTC | 1 cut(s) | 4183 |
| StuI | AGGCCT | 1 cut(s) | 1334 |
| StyD4I | CCNGG | 7 cut(s) | 288, 1511, 1731, 2788, 2797, 3403, 3685 |
| StyI | CCWWGG | 5 cut(s) | 1386, 1546, 3069, 3126, 3456 |
| TaiI | ACGT | 4 cut(s) | 370, 1694, 3994, 4420 |
| TaqI | TCGA | 7 cut(s) | 444, 647, 869, 1669, 3233, 3915, 4161 |
| TatI | WGTACW | 7 cut(s) | 30, 155, 1077, 1125, 2486, 2744, 4097 |
| TauI | GCSGC | 2 cut(s) | 270, 3536 |
| TseFI | GTSAC | 3 cut(s) | 1846, 1868, 3145 |
| TseI | GCWGC | 6 cut(s) | 2144, 2407, 3397, 3929, 4209, 4274 |
| Tsp45I | GTSAC | 3 cut(s) | 1846, 1868, 3145 |
| TspGWI | ACGGA | 2 cut(s) | 2048, 3529 |
| VpaK11BI | GGWCC | 4 cut(s) | 274, 1515, 2056, 3727 |
| VspI | ATTAAT | 1 cut(s) | 2820 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1055 |
| XapI | RAATTY | 8 cut(s) | 640, 1454, 1492, 1863, 2457, 2839, 2992, 3675 |
| XbaI | TCTAGA | 2 cut(s) | 917, 1445 |
| XceI | RCATGY | 1 cut(s) | 3373 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1808, 2234 |
| XmaJI | CCTAGG | 1 cut(s) | 1546 |
| XmiI | GTMKAC | 2 cut(s) | 364, 3857 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3277, 4355 |
| XspI | CTAG | 9 cut(s) | 918, 984, 1446, 1547, 2064, 2280, 2316, 2397, 4004 |
| ZraI | GACGTC | 1 cut(s) | 1692 |
| ZrmI | AGTACT | 1 cut(s) | 2746 |
| Zsp2I | ATGCAT | 3 cut(s) | 1293, 4052, 4464 |