Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0007376

Physical Location & Seq

Genomic Coordinates Reverse (-)

2837405 .. 2840039

Gene Structure 2635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g04480.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGAGGAAACAAGGAGGAGAAATAATGAAACTGATGAAAATCGCATGCAAGTTAAACTCAGAAAAGGGGCCCAAAGTGGCTCGGGAGAAGCCTCTAGTTTCCAATCATCTTTGAATGTGGTTTCCCAAGCTACAATGCAACCGCATAATGTTGAGGGGCATAAGATAAGCCCACAGGCAATGCTGCTGCCTCCCCCTTCTCAATTGATAGCTAGAGGATCACTGATCATGGAGTCATCAAGTGGGATGGCAACTCAGGAAATTTCTGAAGAAATTCCAGATAGTGGTTCGCCTGCCTTGCATACTCACTTGGGGAACCAAACTTCTGCTTTGCACCGAGAATCATCCAGTGGAAGTGGAAACTCCGAGACTCAAGGGGAGATTTTATACCTCATTCCTGAAGATGCTTTGGGTTCAACTTATCGTTTGGAGAAATCATCTTCACAGTTTTTCGGGGATTTTGTTCAGAAAGCAAGGCATGAAGTCTCAACTTCTGAAAACCAGAACGAGAATGCAGTTTCTGAAGCAAAATCAGTATATGGAGGTGAGGAGTATGGGGATGGGCTAGGTACTTCGGTTTCGCTCCTAGAATCAAGTAGCGGATATGGAAACACTCAGACTGAAGGGGAGATTTTATACCTTGTTAATCCGGAAGATGCTTTGGATTCAGCTTACCGTTTGGAGAAGTCATCTTCACGGTTTGTTGGGGAGTTCTTTGATAGAGCAAGACATGAAGTCTCAACTTCCGAAAATCAGGATGCAAATACAGTTTCTGAAGCAAAATTGGCGCATGGAGGTGAGAAGAATGGGCAAGTGGATTCGAGTCAAAATAGGTCTGAAGACTCTCAGAAAAAGGGAAATGACTCAAGGCGTTCATCTGGAGGTTCTGGAACCAAGGGGCCTGCTGATGAAATGTGGGATGTAACAGACACATCTGTTCTTAAAACCCCCAAGGCAGAAAAATCAGAGGCTACTACAACAAGTGGAAGTACCGTTGTCAAGAGAACGGGCAGGTCCGTATGGAACATTGTTGCAGATATTGTTAGGCTGAGGTGGACTTCGCACGCTGAAACCCCTCATTCTGCTGTGAAGTCAGGCGGAAGGACTTCATCAAATGAATCTGCAAGTAGTGAGGCATGGTTTTCTGGCCATGAGACCGAGGATAGCAATGAAAAGAATGCAAAAAGGGATAAAGACGTGGAACATCAGCTGCAACCGCCTAAATCATTTCCTCAAAGTGGAAAACTGAGATCAAGGGACAAAGTAAGACATCTTGAAGCAGGCACGCCGTCTTCTCCTAATAAAGAAGAAAGTGGGTTGCCATCAAAAGTCATTTCCGCGTCTTCTAGTGAGGGAATTTTAGGTTCAAACGAGAATCAAAAGAGTTTTCGCGGTTCTTCTTCTGGCATTGAAAAAGTGGAGTCATCTCAACCACTAATTGCTAGTGGCGTAAAGTCTGCTGTTGTAGAAGAAATTTCAAATGCCGGTAACATTGTCTCTGGAAGTGGTTCGATGGAGCGCATAGACCAATTTGGCAGTCAGAAGTTGACCGAAGGAGTATCAGACAATGTGCAAATGGGTGGGGAATTGAAACAAAGGAGGTTTCAGAGGAATAAGCAAGTCCTCAGAGACAGATTTGACGAATGGGCAGAAGCACATACACATGAAATTGAACAAAGAAAAATGGATGAAATGTTTATGAGAGAAGCACTTCTCGAAGCTAAGAAGGCTGCTGATATTTGGGAGGTACCTGTCGGGGCTGTACTGGTACAACAAGGAAAGATTATTGCACGTGGATGTAATCTAGTGGAAGAATTACGGGATTCAACAGCCCATGCAGAAATGATATGCATACGGGAGGCTTCTAACGTTCTCCGGTCATGGAGGCTTTCGGAAACCACTCTGTATGTAACACTTGAACCGTGCCCTATGTGTGCTGGAGCGATACTCCAAGCAAGAGTCGACACTGTTGTATGGGGAGCTCCAAATAAGCTTCTCGGAGCTGATGGCAGCTGGATAAGACTTTTCCCTGAAGGGGGTGAAGGAAATAGCTCGGAGCACTCGGACAAACCAGCTCCTCCTGTCCACCCATTCCACCCAAACATGACCATCCGACGTGGTGTGTTGGCATCGGATTGTGCAGATATAATGCAGCAATTCTTCCAGCTGAGGAGAAAGAAGAAGGAAAAGCAGGCAGACCCGGCAGCAGCGGTCTCGCGTCCTCTTCCAATTTCTCACCATCCATCAAAGTTACTTACAAAGATGCATGACATCTTCCACATAATGTTCTGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002097 GO:0002100 GO:0003674 GO:0003824 GO:0004000 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006382 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008251 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016553 GO:0016787 GO:0016810 GO:0016814 GO:0019239 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071944 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MafB19-deam dCMP_cyt_deam_1

Protein Analysis

766

Amino Acids

83.52

Weight (kDa)

5.82

Isoelectric Point (pI)

52.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68720
fragaria_vesca	FvH4_4g28440 FvH4_4g28440 FvH4_4g28440
malus_domestica	MD13G1050100.v1.1 MD13G1050300.v1.1 MD16G1051000.v1.1
prunus_persica	Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1
pyrus_communis	pycom13g04440 pycom16g04480
rosa_chinensis	RchiOBHm_Chr4g0436391 RchiOBHm_Chr4g0436401
rosa_laevigata	RLG00000006522
rosa_multiflora	Rmu_co8246795.1_g000001 Rmu_co8256611.1_g000001 Rmu_sc0010255.1_g000001 Rmu_sc0016929.1_g000003
rosa_roxburghii	Rroxscaffold_5G00377560
rosa_rugosa	Rorug04G0293500
rosa_samantha	Rh4AG347800 Rh4BG356600 Rh4CG371200
rosa_wichuraiana	Rw4G030410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1002
Acc65I	GGTACC	1 cut(s)	1747
AccB1I	GGYRCC	1 cut(s)	1747
AccB7I	CCANNNNNTGG	1 cut(s)	284
AccI	GTMKAC	1 cut(s)	1962
AccII	CGCG	3 cut(s)	1340, 1392, 2218
AccIII	TCCGGA	1 cut(s)	649
AciI	CCGC	7 cut(s)	143, 600, 1098, 1217, 1338, 1392, 2210
AclI	AACGTT	1 cut(s)	1869
AclWI	GGATC	1 cut(s)	226
AcoI	YGGCCR	1 cut(s)	1147
AcsI	RAATTY	4 cut(s)	261, 273, 1356, 1473
AcuI	CTGAAG	7 cut(s)	288, 420, 543, 642, 795, 858, 2052
AcvI	CACGTG	1 cut(s)	1793
AfaI	GTAC	5 cut(s)	571, 991, 1749, 1764, 1770
AfiI	CCNNNNNNNGG	4 cut(s)	284, 1238, 2035, 2036
AhdI	GACNNNNNGTC	1 cut(s)	734
AjiI	CACGTC	2 cut(s)	1198, 2117
Alw21I	GWGCWC	2 cut(s)	1984, 2061
Alw26I	GTCTC	7 cut(s)	362, 490, 742, 1148, 1501, 1623, 2218
AlwI	GGATC	1 cut(s)	226
AlwNI	CAGNNNCTG	2 cut(s)	521, 773
Ama87I	CYCGRG	1 cut(s)	82
Aor13HI	TCCGGA	1 cut(s)	649
AoxI	GGCC	3 cut(s)	69, 899, 1147
ApaI	GGGCCC	1 cut(s)	73
ApeKI	GCWGC	8 cut(s)	184, 187, 1210, 1730, 2010, 2152, 2204, 2207
ApoI	RAATTY	4 cut(s)	261, 273, 1356, 1473
Asp700I	GAANNNNTTC	4 cut(s)	273, 1105, 1507, 1710
Asp718I	GGTACC	1 cut(s)	1747
AspLEI	GCGC	2 cut(s)	790, 1521
AspS9I	GGNCC	4 cut(s)	69, 70, 899, 1014
AsuC2I	CCSGG	1 cut(s)	2201
AsuHPI	GGTGA	4 cut(s)	557, 809, 2051, 2228
AvaI	CYCGRG	1 cut(s)	82
AvaII	GGWCC	1 cut(s)	1014
BaeGI	GKGCMC	2 cut(s)	73, 1928
BaeI	ACNNNNGTAYC	2 cut(s)	561, 594
BalI	TGGCCA	1 cut(s)	1149
BanI	GGYRCC	1 cut(s)	1747
BanII	GRGCYC	2 cut(s)	73, 1984
BbrPI	CACGTG	1 cut(s)	1793
BbsI	GAAGAC	3 cut(s)	846, 1284, 1335
Bbv12I	GWGCWC	2 cut(s)	1984, 2061
BbvCI	CCTCAGC	2 cut(s)	1049, 2168
BbvI	GCAGC	8 cut(s)	171, 174, 1197, 1717, 2022, 2164, 2216, 2219
BccI	CCATC	8 cut(s)	241, 554, 1330, 1507, 2000, 2117, 2247, 2251
BceAI	ACGGC	1 cut(s)	1273
BcgI	CGANNNNNNTGC	2 cut(s)	2196, 2230
BclI	TGATCA	1 cut(s)	225
BcnI	CCSGG	1 cut(s)	2201
BcoDI	GTCTC	7 cut(s)	362, 490, 742, 1148, 1501, 1623, 2218
BfaI	CTAG	7 cut(s)	96, 213, 566, 587, 1347, 1443, 1805
BfuAI	ACCTGC	1 cut(s)	1002
BisI	GCNGC	8 cut(s)	185, 188, 1211, 1731, 2011, 2153, 2205, 2208
BlsI	GCNGC	8 cut(s)	186, 189, 1212, 1732, 2012, 2154, 2206, 2209
Bme1390I	CCNGG	1 cut(s)	2201
Bme18I	GGWCC	1 cut(s)	1014
BmeRI	GACNNNNNGTC	1 cut(s)	734
BmeT110I	CYCGRG	1 cut(s)	82
BmgBI	CACGTC	2 cut(s)	1198, 2117
BmgT120I	GGNCC	4 cut(s)	69, 70, 899, 1014
BmiI	GGNNCC	6 cut(s)	70, 71, 317, 892, 900, 1749
BmrFI	CCNGG	1 cut(s)	2201
BmsI	GCATC	5 cut(s)	394, 646, 748, 2138, 2253
BpiI	GAAGAC	3 cut(s)	846, 1284, 1335
BplI	GAGNNNNNCTC	2 cut(s)	1932, 1964
BpmI	CTGGAG	2 cut(s)	900, 1959
Bpu10I	CCTNAGC	2 cut(s)	1049, 2168
BpuEI	CTTGAG	2 cut(s)	357, 850
BpuMI	CCSGG	1 cut(s)	2201
BsaAI	YACGTR	1 cut(s)	1793
BsaBI	GATNNNNATC	1 cut(s)	39
BsaI	GGTCTC	2 cut(s)	1148, 2218
BsaJI	CCNNGG	3 cut(s)	894, 951, 1158
BsaWI	WCCGGW	2 cut(s)	649, 1875
Bsc4I	CCNNNNNNNGG	4 cut(s)	284, 1238, 2035, 2036
Bse118I	RCCGGY	1 cut(s)	1484
Bse1I	ACTGG	2 cut(s)	348, 1770
Bse3DI	GCAATG	2 cut(s)	186, 1174
Bse8I	GATNNNNATC	1 cut(s)	39
BseAI	TCCGGA	1 cut(s)	649
BseDI	CCNNGG	3 cut(s)	894, 951, 1158
BseGI	GGATG	9 cut(s)	252, 344, 565, 763, 925, 1693, 1802, 2109, 2239
BseJI	GATNNNNATC	1 cut(s)	39
BseLI	CCNNNNNNNGG	4 cut(s)	284, 1238, 2035, 2036
BseMI	GCAATG	2 cut(s)	186, 1174
BseMII	CTCAG	8 cut(s)	73, 269, 629, 860, 1040, 1238, 1639, 2159
BseNI	ACTGG	2 cut(s)	348, 1770
BseRI	GAGGAG	4 cut(s)	31, 563, 2067, 2185
BseSI	GKGCMC	2 cut(s)	73, 1928
BseXI	GCAGC	8 cut(s)	171, 174, 1197, 1717, 2022, 2164, 2216, 2219
BsgI	GTGCAG	1 cut(s)	2160
Bsh1236I	CGCG	3 cut(s)	1340, 1392, 2218
BshFI	GGCC	3 cut(s)	71, 901, 1149
BshNI	GGYRCC	1 cut(s)	1747
BsiHKAI	GWGCWC	2 cut(s)	1984, 2061
BsiHKCI	CYCGRG	1 cut(s)	82
BsiSI	CCGG	4 cut(s)	650, 1485, 1876, 2201
BslFI	GGGAC	1 cut(s)	1271
BslI	CCNNNNNNNGG	4 cut(s)	284, 1238, 2035, 2036
BsmAI	GTCTC	7 cut(s)	362, 490, 742, 1148, 1501, 1623, 2218
BsmFI	GGGAC	1 cut(s)	1271
BsmI	GAATGC	2 cut(s)	517, 1183
BsnI	GGCC	3 cut(s)	71, 901, 1149
Bso31I	GGTCTC	2 cut(s)	1148, 2218
BsoBI	CYCGRG	1 cut(s)	82
Bsp120I	GGGCCC	1 cut(s)	69
Bsp1286I	GDGCHC	4 cut(s)	73, 1928, 1984, 2061
Bsp13I	TCCGGA	1 cut(s)	649
Bsp143I	GATC	3 cut(s)	218, 225, 1250
BspACI	CCGC	7 cut(s)	143, 600, 1098, 1217, 1338, 1392, 2210
BspANI	GGCC	3 cut(s)	71, 901, 1149
BspCNI	CTCAG	8 cut(s)	72, 268, 628, 859, 1041, 1239, 1638, 2160
BspEI	TCCGGA	1 cut(s)	649
BspFNI	CGCG	3 cut(s)	1340, 1392, 2218
BspLI	GGNNCC	6 cut(s)	70, 71, 317, 892, 900, 1749
BspMI	ACCTGC	1 cut(s)	1002
BspPI	GGATC	1 cut(s)	226
BspT107I	GGYRCC	1 cut(s)	1747
BspTNI	GGTCTC	2 cut(s)	1148, 2218
BsrDI	GCAATG	2 cut(s)	186, 1174
BsrFI	RCCGGY	1 cut(s)	1484
BsrI	ACTGG	2 cut(s)	348, 1770
BssAI	RCCGGY	1 cut(s)	1484
BssECI	CCNNGG	3 cut(s)	894, 951, 1158
BssMI	GATC	3 cut(s)	218, 225, 1250
BssT1I	CCWWGG	2 cut(s)	894, 951
Bst4CI	ACNGT	7 cut(s)	447, 677, 699, 769, 994, 1923, 1969
Bst6I	CTCTTC	1 cut(s)	2229
BstBAI	YACGTR	1 cut(s)	1793
BstC8I	GCNNGC	7 cut(s)	47, 294, 903, 1065, 1282, 1286, 2193
BstDEI	CTNAG	9 cut(s)	59, 255, 615, 846, 1049, 1247, 1625, 1722, 2168
BstF5I	GGATG	9 cut(s)	252, 344, 565, 763, 925, 1693, 1802, 2109, 2239
BstFNI	CGCG	3 cut(s)	1340, 1392, 2218
BstHHI	GCGC	2 cut(s)	790, 1521
BstKTI	GATC	3 cut(s)	221, 228, 1253
BstMAI	GTCTC	7 cut(s)	362, 490, 742, 1148, 1501, 1623, 2218
BstMBI	GATC	3 cut(s)	218, 225, 1250
BstMWI	GCNNNNNNNGC	5 cut(s)	298, 785, 1216, 1727, 2201
BstNSI	RCATGY	1 cut(s)	49
BstSCI	CCNGG	1 cut(s)	2199
BstSLI	GKGCMC	2 cut(s)	73, 1928
BstUI	CGCG	3 cut(s)	1340, 1392, 2218
BstV1I	GCAGC	8 cut(s)	171, 174, 1197, 1717, 2022, 2164, 2216, 2219
BstV2I	GAAGAC	3 cut(s)	846, 1284, 1335
BsuRI	GGCC	3 cut(s)	71, 901, 1149
BtrI	CACGTC	2 cut(s)	1198, 2117
BtsCI	GGATG	9 cut(s)	252, 344, 565, 763, 925, 1693, 1802, 2109, 2239
BtsIMutI	CAGTG	3 cut(s)	221, 355, 1965
BveI	ACCTGC	1 cut(s)	1002
Cac8I	GCNNGC	7 cut(s)	47, 294, 903, 1065, 1282, 1286, 2193
CaiI	CAGNNNCTG	2 cut(s)	521, 773
CfoI	GCGC	2 cut(s)	790, 1521
Cfr10I	RCCGGY	1 cut(s)	1484
Cfr13I	GGNCC	4 cut(s)	69, 70, 899, 1014
CseI	GACGC	2 cut(s)	1329, 2207
Csp6I	GTAC	5 cut(s)	570, 990, 1748, 1763, 1769
CviQI	GTAC	5 cut(s)	570, 990, 1748, 1763, 1769
DdeI	CTNAG	9 cut(s)	59, 255, 615, 846, 1049, 1247, 1625, 1722, 2168
DpnI	GATC	3 cut(s)	220, 227, 1252
DpnII	GATC	3 cut(s)	218, 225, 1250
DriI	GACNNNNNGTC	1 cut(s)	734
EaeI	YGGCCR	1 cut(s)	1147
Eam1104I	CTCTTC	1 cut(s)	2229
Eam1105I	GACNNNNNGTC	1 cut(s)	734
EarI	CTCTTC	1 cut(s)	2229
EciI	GGCGGA	1 cut(s)	1113
Ecl136II	GAGCTC	1 cut(s)	1982
Eco130I	CCWWGG	2 cut(s)	894, 951
Eco24I	GRGCYC	2 cut(s)	73, 1984
Eco31I	GGTCTC	2 cut(s)	1148, 2218
Eco47I	GGWCC	1 cut(s)	1014
Eco53kI	GAGCTC	1 cut(s)	1982
Eco57I	CTGAAG	7 cut(s)	288, 420, 543, 642, 795, 858, 2052
Eco72I	CACGTG	1 cut(s)	1793
Eco88I	CYCGRG	1 cut(s)	82
EcoICRI	GAGCTC	1 cut(s)	1982
EcoO109I	RGGNCCY	2 cut(s)	69, 899
EcoT14I	CCWWGG	2 cut(s)	894, 951
EcoT22I	ATGCAT	2 cut(s)	1853, 2268
EcoT38I	GRGCYC	2 cut(s)	73, 1984
ErhI	CCWWGG	2 cut(s)	894, 951
FaqI	GGGAC	1 cut(s)	1271
FbaI	TGATCA	1 cut(s)	225
FblI	GTMKAC	1 cut(s)	1962
Fnu4HI	GCNGC	8 cut(s)	185, 188, 1211, 1731, 2011, 2153, 2205, 2208
FokI	GGATG	9 cut(s)	259, 331, 572, 770, 932, 1700, 1809, 2096, 2226
FriOI	GRGCYC	2 cut(s)	73, 1984
Fsp4HI	GCNGC	8 cut(s)	185, 188, 1211, 1731, 2011, 2153, 2205, 2208
FspBI	CTAG	7 cut(s)	96, 213, 566, 587, 1347, 1443, 1805
GlaI	GCGC	2 cut(s)	789, 1520
GluI	GCNGC	8 cut(s)	185, 188, 1211, 1731, 2011, 2153, 2205, 2208
GsuI	CTGGAG	2 cut(s)	900, 1959
HaeIII	GGCC	3 cut(s)	71, 901, 1149
HapII	CCGG	4 cut(s)	650, 1485, 1876, 2201
HgaI	GACGC	2 cut(s)	1329, 2207
HhaI	GCGC	2 cut(s)	790, 1521
Hin6I	GCGC	2 cut(s)	788, 1519
HinP1I	GCGC	2 cut(s)	788, 1519
HincII	GTYRAC	2 cut(s)	1548, 1963
HindII	GTYRAC	2 cut(s)	1548, 1963
HindIII	AAGCTT	1 cut(s)	1991
HpaII	CCGG	4 cut(s)	650, 1485, 1876, 2201
HphI	GGTGA	4 cut(s)	557, 809, 2051, 2228
Hpy166II	GTNNAC	4 cut(s)	1056, 1548, 1963, 2086
Hpy8I	GTNNAC	4 cut(s)	1056, 1548, 1963, 2086
Hpy99I	CGWCG	1 cut(s)	2118
HpyAV	CCTTC	8 cut(s)	207, 617, 1095, 1547, 1720, 2027, 2036, 2176
HpyCH4III	ACNGT	7 cut(s)	447, 677, 699, 769, 994, 1923, 1969
HpyCH4IV	ACGT	4 cut(s)	1197, 1792, 1869, 2116
HpyF10VI	GCNNNNNNNGC	5 cut(s)	298, 785, 1216, 1727, 2201
HpyF3I	CTNAG	9 cut(s)	59, 255, 615, 846, 1049, 1247, 1625, 1722, 2168
HpySE526I	ACGT	4 cut(s)	1197, 1792, 1869, 2116
HspAI	GCGC	2 cut(s)	788, 1519
Kpn2I	TCCGGA	1 cut(s)	649
KpnI	GGTACC	1 cut(s)	1751
Ksp22I	TGATCA	1 cut(s)	225
Kzo9I	GATC	3 cut(s)	218, 225, 1250
LmnI	GCTCC	8 cut(s)	588, 1516, 1940, 1979, 1987, 2000, 2056, 2080
Lsp1109I	GCAGC	8 cut(s)	171, 174, 1197, 1717, 2022, 2164, 2216, 2219
LweI	GCATC	5 cut(s)	394, 646, 748, 2138, 2253
MaeI	CTAG	7 cut(s)	96, 213, 566, 587, 1347, 1443, 1805
MaeII	ACGT	4 cut(s)	1197, 1792, 1869, 2116
MaeIII	GTNAC	4 cut(s)	922, 1487, 1909, 2250
MalI	GATC	3 cut(s)	220, 227, 1252
MboI	GATC	3 cut(s)	218, 225, 1250
MfeI	CAATTG	1 cut(s)	203
MhlI	GDGCHC	4 cut(s)	73, 1928, 1984, 2061
MlsI	TGGCCA	1 cut(s)	1149
MluNI	TGGCCA	1 cut(s)	1149
MlyI	GAGTC	7 cut(s)	242, 364, 832, 836, 857, 1430, 1968
MmeI	TCCRAC	1 cut(s)	2137
Mox20I	TGGCCA	1 cut(s)	1149
Mph1103I	ATGCAT	2 cut(s)	1853, 2268
MroI	TCCGGA	1 cut(s)	649
MroXI	GAANNNNTTC	4 cut(s)	273, 1105, 1507, 1710
MscI	TGGCCA	1 cut(s)	1149
MseI	TTAA	3 cut(s)	54, 645, 942
MslI	CAYNNNNRTG	3 cut(s)	795, 1662, 1795
Msp20I	TGGCCA	1 cut(s)	1149
MspA1I	CMGCKG	4 cut(s)	1210, 2013, 2167, 2210
MspI	CCGG	4 cut(s)	650, 1485, 1876, 2201
MspR9I	CCNGG	1 cut(s)	2201
MunI	CAATTG	1 cut(s)	203
Mva1269I	GAATGC	2 cut(s)	517, 1183
MvnI	CGCG	3 cut(s)	1340, 1392, 2218
MwoI	GCNNNNNNNGC	5 cut(s)	298, 785, 1216, 1727, 2201
NciI	CCSGG	1 cut(s)	2201
NdeII	GATC	3 cut(s)	218, 225, 1250
NlaIV	GGNNCC	6 cut(s)	70, 71, 317, 892, 900, 1749
NsiI	ATGCAT	2 cut(s)	1853, 2268
NspI	RCATGY	1 cut(s)	49
PaeI	GCATGC	1 cut(s)	49
PctI	GAATGC	2 cut(s)	517, 1183
PdmI	GAANNNNTTC	4 cut(s)	273, 1105, 1507, 1710
PfeI	GAWTC	7 cut(s)	341, 590, 665, 818, 1118, 1375, 1823
PflMI	CCANNNNNTGG	1 cut(s)	284
PkrI	GCNGC	8 cut(s)	186, 189, 1212, 1732, 2012, 2154, 2206, 2209
PleI	GAGTC	7 cut(s)	241, 364, 831, 836, 857, 1429, 1967
PmaCI	CACGTG	1 cut(s)	1793
PmlI	CACGTG	1 cut(s)	1793
PpsI	GAGTC	7 cut(s)	241, 364, 831, 836, 857, 1429, 1967
Ppu21I	YACGTR	1 cut(s)	1793
Psp124BI	GAGCTC	1 cut(s)	1984
Psp1406I	AACGTT	1 cut(s)	1869
PspCI	CACGTG	1 cut(s)	1793
PspN4I	GGNNCC	6 cut(s)	70, 71, 317, 892, 900, 1749
PspOMI	GGGCCC	1 cut(s)	69
PspPI	GGNCC	4 cut(s)	69, 70, 899, 1014
PstNI	CAGNNNCTG	2 cut(s)	521, 773
PvuII	CAGCTG	3 cut(s)	1210, 2013, 2167
RsaI	GTAC	5 cut(s)	571, 991, 1749, 1764, 1770
RsaNI	GTAC	5 cut(s)	570, 990, 1748, 1763, 1769
RseI	CAYNNNNRTG	3 cut(s)	795, 1662, 1795
SacI	GAGCTC	1 cut(s)	1984
SalI	GTCGAC	1 cut(s)	1961
SaqAI	TTAA	3 cut(s)	54, 645, 942
SatI	GCNGC	8 cut(s)	185, 188, 1211, 1731, 2011, 2153, 2205, 2208
Sau3AI	GATC	3 cut(s)	218, 225, 1250
Sau96I	GGNCC	4 cut(s)	69, 70, 899, 1014
SchI	GAGTC	7 cut(s)	242, 364, 832, 836, 857, 1430, 1968
ScrFI	CCNGG	1 cut(s)	2201
SduI	GDGCHC	4 cut(s)	73, 1928, 1984, 2061
SfaNI	GCATC	5 cut(s)	394, 646, 748, 2138, 2253
SinI	GGWCC	1 cut(s)	1014
SmiMI	CAYNNNNRTG	3 cut(s)	795, 1662, 1795
SmlI	CTYRAG	2 cut(s)	372, 865
SmoI	CTYRAG	2 cut(s)	372, 865
SphI	GCATGC	1 cut(s)	49
SsiI	CCGC	7 cut(s)	143, 600, 1098, 1217, 1338, 1392, 2210
SspMI	CTAG	7 cut(s)	96, 213, 566, 587, 1347, 1443, 1805
SstI	GAGCTC	1 cut(s)	1984
StyD4I	CCNGG	1 cut(s)	2199
StyI	CCWWGG	2 cut(s)	894, 951
TaaI	ACNGT	7 cut(s)	447, 677, 699, 769, 994, 1923, 1969
TaiI	ACGT	4 cut(s)	1200, 1795, 1872, 2119
TaqI	TCGA	4 cut(s)	821, 1511, 1716, 1962
TaqII	GACCGA	2 cut(s)	1172, 1565
TatI	WGTACW	1 cut(s)	1762
TfiI	GAWTC	7 cut(s)	341, 590, 665, 818, 1118, 1375, 1823
Tru1I	TTAA	3 cut(s)	54, 645, 942
Tru9I	TTAA	3 cut(s)	54, 645, 942
TscAI	CASTG	3 cut(s)	228, 355, 1972
TseI	GCWGC	8 cut(s)	184, 187, 1210, 1730, 2010, 2152, 2204, 2207
TspGWI	ACGGA	1 cut(s)	1006
TspRI	CASTG	3 cut(s)	228, 355, 1972
Van91I	CCANNNNNTGG	1 cut(s)	284
VpaK11BI	GGWCC	1 cut(s)	1014
XapI	RAATTY	4 cut(s)	261, 273, 1356, 1473
XceI	RCATGY	1 cut(s)	49
XmiI	GTMKAC	1 cut(s)	1962
XmnI	GAANNNNTTC	4 cut(s)	273, 1105, 1507, 1710
XspI	CTAG	7 cut(s)	96, 213, 566, 587, 1347, 1443, 1805
Zsp2I	ATGCAT	2 cut(s)	1853, 2268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.