Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010255.1

Orthogroup ID

OG0007376

Physical Location & Seq

Genomic Coordinates Reverse (-)

362 .. 3804

Gene Structure 3443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010255.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

atgggcctgatttcagttgaggggacagaagagcaatgccaccaaataagccatcaattagatcaaaaagttattcagagagttcaatccagaaaaggaaccaatgatgctgccgaaatgtcgtatgttcatgcaagtgatacagcaagaaataccaattcccaaagaaccttggacaagagaactaccaatcaaggaagtattacagtattggctgcaacatcagttgaggaaacagtacagagaaataatcaaactgatgaaaagctcaagcaagttaaatcaagaaaagaggcccaaagttcaacagaagtatcaactcttccggaaaaatactcaggagaaccttctagtttccaagtatctttgagtatggtttcccaagctagaatgcaacgggaggatgttgaggggcataagagaagtccacaggcaccactgttgcctccccctcctcaattgattgctagaggatcggcacgcattgagttgtcgagtgagactgcagctcaggaggtttctggagaaacttcagagagtaattcagctctgaactatgagtcttgtggtggaaacagtaacactgagactccagcagagattttatacctcgataatcctgaagatgctttgggttcagctcatcggttggaggaatcatcttcacagtttattggggagttctttgagaaaattagatatggagtctcaacttctgaaaaccagactgcccagagagtttctggagcaactttggtgtatggaggtgaaaagtatgggcaaaagactttgacttcgtcatccagcggaaatggaactgatgagactcaaggggaaaattcctacctcattaatcctgaagatgctttgggttcagctcagcgtttggagaagtcatcttcacagtttgttggggagttctctgagaaggcaaggcatgaagcctcaacttctgaagaatatggggcggagatttctgaagcaaaatgggtgcctggaggtgagaagcatggtcaaataacttcaagtcaatatgggtctgaagactctcagctgaaggggaaccagtcaaggcgttcatctggaggttctggaaccaaagggccttcagttgaaatgtgggatgtgaccgacacatccactcttaaaagccctgaggaagaaaaaccagaggctactacaactagtgaaaaatcagaggctactacagcaagtgaaaaattagaggctactactacaagtgggaatgccgttgccaagaaaaccggcaggtccatatggaatgttgttgcagatatagttaagctgaggtggatttctcatgctgagacccatcattctggtgcaaggtcaggtgaaaggatttcatcaactgaatctggaagtagtgaggcctggttttctggccgtgagactgaggagaacagcgaaaagaatgtgaaacgggagaaaggcatgcaaccagagaccacctctgatcagctacgaccagcgaaatcattttctcaaagtgaaaaagtgtctggccctgtgaaatcaaaggacaaagtaagatatcttgaaacaagtatgacatcttctccaaataaagaggaaagtaggtcgacgtcaaaatctgtttccttgtcttctggtgaggagactttgagtccgaaagataatcaaaagaatttccgaggttcttcttctggcattcagattgttgaatcgtcacaatcacaaattgctagtggcataaagtctcctgttgtggaagaaatttcaaatgctggttacgccgtctctggaagtgtttcaaaagataaccaaaagaattttagaggttcttcttctggcattcaaatagttgaatcatcacaatcacaaattgctagtggcataaagtatcctgttgtggaagaaatttcagacgctggttacactgtttctggaagtggttcagaggagaacagggaccaatttggttgtcagaagtttgatgaagagtcagacaatgtgcaaaagggtgcagaattgaaacaaaggaagcttcaaaggaataagcaagtcctgaaagacagatttgatgaatgggaagaagctcagaatcttgaaattgaacagagaaaaacagatgagttttttatgagagaagcactgcttgaagcgaagaaggctgctgatacttgggaggttcctgttggtgctgtactggtgcaacaggggaaggttattgcacgtggatttaacctagtggaagaattacgagattcaacagcccatgctgaaatgatatgcatacgggaggcttcaaacgttcttcggacttggaggcttgcggagtctacactttatgtaacacttgaaccctgccctatgtgtgctggagcaattcttcaagcaagagttgacactgttgtatggggagctcctaataagcttcttggagctgatgggagctggataagactttttcgcgatgggggccaaggaagtgagtcggaacagtcagaaaagccagctgcaccagtccacccattccacccgaacataaccatccgacgaggcgtgttggcatcagagtgcgcagatataatgcagcaattcttccagctgagaagaaaaaagaaggaaaagaggcaggcaggcccaccagcaccgccttcgtcccgtgctgtttctcaccatccacggaagatacttacgaagctgcatgacatcttccacataatgttctgtttatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002097 GO:0002100 GO:0003674 GO:0003824 GO:0004000 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006382 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008251 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016553 GO:0016787 GO:0016810 GO:0016814 GO:0019239 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071944 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MafB19-deam dCMP_cyt_deam_1

Protein Analysis

907

Amino Acids

99.26

Weight (kDa)

5.61

Isoelectric Point (pI)

51.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68720
fragaria_vesca	FvH4_4g28440 FvH4_4g28440 FvH4_4g28440
malus_domestica	MD13G1050100.v1.1 MD13G1050300.v1.1 MD16G1051000.v1.1
prunus_persica	Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1
pyrus_communis	pycom13g04440 pycom16g04480
rosa_chinensis	RchiOBHm_Chr4g0436391 RchiOBHm_Chr4g0436401
rosa_laevigata	RLG00000006522
rosa_multiflora	Rmu_co8246795.1_g000001 Rmu_co8256611.1_g000001 Rmu_sc0010255.1_g000001 Rmu_sc0016929.1_g000003
rosa_roxburghii	Rroxscaffold_5G00377560
rosa_rugosa	Rorug04G0293500
rosa_samantha	Rh4AG347800 Rh4BG356600 Rh4CG371200
rosa_wichuraiana	Rw4G030410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1610
Acc16I	TGCGCA	1 cut(s)	2566
Acc36I	ACCTGC	1 cut(s)	1260
AccB1I	GGYRCC	2 cut(s)	433, 991
AccI	GTMKAC	2 cut(s)	1604, 2324
AccII	CGCG	1 cut(s)	2457
AccIII	TCCGGA	1 cut(s)	325
AciI	CCGC	4 cut(s)	807, 968, 2318, 2639
AclI	AACGTT	1 cut(s)	2295
AclWI	GGATC	1 cut(s)	481
AcoI	YGGCCR	1 cut(s)	1405
AcsI	RAATTY	5 cut(s)	838, 1669, 1758, 1813, 1902
AcuI	CTGAAG	8 cut(s)	516, 642, 879, 975, 999, 1062, 1076, 1092
AcvI	CACGTG	1 cut(s)	2219
AcyI	GRCGYC	1 cut(s)	1607
AfaI	GTAC	2 cut(s)	240, 2190
AhdI	GACNNNNNGTC	1 cut(s)	1647
AhlI	ACTAGT	1 cut(s)	1184
AjnI	CCWGG	2 cut(s)	994, 1394
Alw21I	GWGCWC	1 cut(s)	2410
AlwI	GGATC	1 cut(s)	481
AlwNI	CAGNNNCTG	1 cut(s)	1913
Aor13HI	TCCGGA	1 cut(s)	325
AoxI	GGCC	8 cut(s)	4, 294, 1103, 1392, 1405, 1525, 2464, 2626
ApeKI	GCWGC	7 cut(s)	110, 215, 506, 2156, 2501, 2578, 2689
ApoI	RAATTY	5 cut(s)	838, 1669, 1758, 1813, 1902
ArsI	GACNNNNNNTTYG	2 cut(s)	778, 810
AseI	ATTAAT	1 cut(s)	852
Asp700I	GAANNNNTTC	2 cut(s)	1792, 1936
AspLEI	GCGC	1 cut(s)	2567
AspS9I	GGNCC	8 cut(s)	4, 295, 1103, 1272, 1526, 1954, 2464, 2627
AsuHPI	GGTGA	5 cut(s)	779, 1013, 1367, 1646, 2654
AvaII	GGWCC	2 cut(s)	1272, 1954
AxyI	CCTNAGG	1 cut(s)	1155
BaeI	ACNNNNGTAYC	2 cut(s)	297, 330
BanI	GGYRCC	2 cut(s)	433, 991
BanII	GRGCYC	1 cut(s)	2410
BarI	GAAGNNNNNNTAC	4 cut(s)	306, 338, 1561, 1593
BbrPI	CACGTG	1 cut(s)	2219
BbsI	GAAGAC	2 cut(s)	1050, 1620
Bbv12I	GWGCWC	1 cut(s)	2410
BbvCI	CCTCAGC	1 cut(s)	1307
BbvI	GCAGC	7 cut(s)	97, 202, 518, 2143, 2488, 2590, 2676
BccI	CCATC	6 cut(s)	60, 1341, 2426, 2453, 2543, 2673
BceAI	ACGGC	3 cut(s)	1235, 1392, 1763
BcgI	CGANNNNNNTGC	2 cut(s)	2625, 2659
BciT130I	CCWGG	2 cut(s)	996, 1396
BciVI	GTATCC	1 cut(s)	1896
BclI	TGATCA	1 cut(s)	1477
BcuI	ACTAGT	1 cut(s)	1184
BfaI	CTAG	7 cut(s)	351, 387, 468, 1185, 1728, 1872, 2231
BfmI	CTRYAG	2 cut(s)	504, 1206
BfuAI	ACCTGC	1 cut(s)	1260
BfuI	GTATCC	1 cut(s)	1896
BisI	GCNGC	7 cut(s)	111, 216, 507, 2157, 2502, 2579, 2690
BlpI	GCTNAGC	1 cut(s)	879
BlsI	GCNGC	7 cut(s)	112, 217, 508, 2158, 2503, 2580, 2691
Bme1390I	CCNGG	2 cut(s)	996, 1396
Bme18I	GGWCC	2 cut(s)	1272, 1954
BmeRI	GACNNNNNGTC	1 cut(s)	1647
BmgT120I	GGNCC	8 cut(s)	4, 295, 1103, 1272, 1526, 1954, 2464, 2627
BmiI	GGNNCC	8 cut(s)	100, 435, 993, 1064, 1096, 1955, 2175, 2465
BmrFI	CCNGG	2 cut(s)	996, 1396
BmsI	GCATC	4 cut(s)	97, 616, 853, 2564
BpiI	GAAGAC	2 cut(s)	1050, 1620
BplI	GAGNNNNNCTC	2 cut(s)	1457, 1489
BpmI	CTGGAG	6 cut(s)	543, 576, 765, 1017, 1104, 2385
Bpu10I	CCTNAGC	2 cut(s)	510, 1307
Bpu1102I	GCTNAGC	1 cut(s)	879
BpuEI	CTTGAG	2 cut(s)	254, 813
BsaAI	YACGTR	1 cut(s)	2219
BsaHI	GRCGYC	1 cut(s)	1607
BsaI	GGTCTC	2 cut(s)	1322, 1460
BsaJI	CCNNGG	4 cut(s)	171, 1675, 2467, 2669
BsaWI	WCCGGW	1 cut(s)	325
BsaXI	ACNNNNNCTCC	4 cut(s)	574, 604, 1564, 1594
Bse118I	RCCGGY	1 cut(s)	1265
Bse1I	ACTGG	3 cut(s)	1066, 2196, 2507
Bse21I	CCTNAGG	1 cut(s)	1155
Bse3DI	GCAATG	1 cut(s)	41
BseAI	TCCGGA	1 cut(s)	325
BseBI	CCWGG	2 cut(s)	996, 1396
BseDI	CCNNGG	4 cut(s)	171, 1675, 2467, 2669
BseGI	GGATG	6 cut(s)	409, 800, 1129, 1136, 2535, 2665
BseMI	GCAATG	1 cut(s)	41
BseNI	ACTGG	3 cut(s)	1066, 2196, 2507
BseRI	GAGGAG	4 cut(s)	444, 1433, 1652, 1958
BseXI	GCAGC	7 cut(s)	97, 202, 518, 2143, 2488, 2590, 2676
BsgI	GTGCAG	2 cut(s)	2028, 2487
Bsh1236I	CGCG	1 cut(s)	2457
BshFI	GGCC	8 cut(s)	6, 296, 1105, 1394, 1407, 1527, 2466, 2628
BshNI	GGYRCC	2 cut(s)	433, 991
BsiHKAI	GWGCWC	1 cut(s)	2410
BsiSI	CCGG	2 cut(s)	326, 1266
BslFI	GGGAC	3 cut(s)	37, 1967, 2632
BsmBI	CGTCTC	1 cut(s)	1786
BsmFI	GGGAC	3 cut(s)	37, 1967, 2632
BsmI	GAATGC	4 cut(s)	396, 1252, 1692, 1836
BsnI	GGCC	8 cut(s)	6, 296, 1105, 1394, 1407, 1527, 2466, 2628
Bso31I	GGTCTC	2 cut(s)	1322, 1460
Bsp1286I	GDGCHC	1 cut(s)	2410
Bsp13I	TCCGGA	1 cut(s)	325
Bsp143I	GATC	3 cut(s)	61, 473, 1477
Bsp1720I	GCTNAGC	1 cut(s)	879
Bsp68I	TCGCGA	1 cut(s)	2457
BspACI	CCGC	4 cut(s)	807, 968, 2318, 2639
BspANI	GGCC	8 cut(s)	6, 296, 1105, 1394, 1407, 1527, 2466, 2628
BspEI	TCCGGA	1 cut(s)	325
BspFNI	CGCG	1 cut(s)	2457
BspLI	GGNNCC	8 cut(s)	100, 435, 993, 1064, 1096, 1955, 2175, 2465
BspMAI	CTGCAG	1 cut(s)	508
BspMI	ACCTGC	1 cut(s)	1260
BspPI	GGATC	1 cut(s)	481
BspQI	GCTCTTC	1 cut(s)	24
BspT107I	GGYRCC	2 cut(s)	433, 991
BspTNI	GGTCTC	2 cut(s)	1322, 1460
BsrDI	GCAATG	1 cut(s)	41
BsrFI	RCCGGY	1 cut(s)	1265
BsrI	ACTGG	3 cut(s)	1066, 2196, 2507
BssAI	RCCGGY	1 cut(s)	1265
BssECI	CCNNGG	4 cut(s)	171, 1675, 2467, 2669
BssMI	GATC	3 cut(s)	61, 473, 1477
BssNI	GRCGYC	1 cut(s)	1607
BssT1I	CCWWGG	2 cut(s)	171, 2467
Bst2UI	CCWGG	2 cut(s)	996, 1396
Bst4CI	ACNGT	9 cut(s)	208, 238, 441, 578, 669, 906, 1924, 2395, 2487
Bst6I	CTCTTC	3 cut(s)	24, 327, 1977
BstACI	GRCGYC	1 cut(s)	1607
BstBAI	YACGTR	1 cut(s)	2219
BstC8I	GCNNGC	6 cut(s)	481, 1457, 2316, 2499, 2622, 2626
BstDSI	CCRYGG	1 cut(s)	2669
BstF5I	GGATG	6 cut(s)	409, 800, 1129, 1136, 2535, 2665
BstFNI	CGCG	1 cut(s)	2457
BstHHI	GCGC	1 cut(s)	2567
BstKTI	GATC	3 cut(s)	64, 476, 1480
BstMBI	GATC	3 cut(s)	61, 473, 1477
BstMWI	GCNNNNNNNGC	4 cut(s)	1208, 1775, 2153, 2463
BstNI	CCWGG	2 cut(s)	996, 1396
BstNSI	RCATGY	1 cut(s)	1459
BstSCI	CCNGG	2 cut(s)	994, 1394
BstSFI	CTRYAG	2 cut(s)	504, 1206
BstUI	CGCG	1 cut(s)	2457
BstV1I	GCAGC	7 cut(s)	97, 202, 518, 2143, 2488, 2590, 2676
BstV2I	GAAGAC	2 cut(s)	1050, 1620
BstXI	CCANNNNNNTGG	1 cut(s)	1340
Bsu36I	CCTNAGG	1 cut(s)	1155
BsuI	GTATCC	1 cut(s)	1896
BsuRI	GGCC	8 cut(s)	6, 296, 1105, 1394, 1407, 1527, 2466, 2628
BtgI	CCRYGG	1 cut(s)	2669
BtgZI	GCGATG	1 cut(s)	2472
BtsCI	GGATG	6 cut(s)	409, 800, 1129, 1136, 2535, 2665
BtsI	GCAGTG	1 cut(s)	2135
BtsIMutI	CAGTG	5 cut(s)	437, 582, 1920, 2135, 2391
BtuMI	TCGCGA	1 cut(s)	2457
BveI	ACCTGC	1 cut(s)	1260
Cac8I	GCNNGC	6 cut(s)	481, 1457, 2316, 2499, 2622, 2626
CaiI	CAGNNNCTG	1 cut(s)	1913
CfoI	GCGC	1 cut(s)	2567
Cfr10I	RCCGGY	1 cut(s)	1265
Cfr13I	GGNCC	8 cut(s)	4, 295, 1103, 1272, 1526, 1954, 2464, 2627
CseI	GACGC	1 cut(s)	1919
Csp6I	GTAC	2 cut(s)	239, 2189
CviAII	CATG	7 cut(s)	131, 938, 1010, 1322, 1456, 2261, 2693
CviQI	GTAC	2 cut(s)	239, 2189
DpnI	GATC	3 cut(s)	63, 475, 1479
DpnII	GATC	3 cut(s)	61, 473, 1477
DriI	GACNNNNNGTC	1 cut(s)	1647
EaeI	YGGCCR	1 cut(s)	1405
Eam1104I	CTCTTC	3 cut(s)	24, 327, 1977
Eam1105I	GACNNNNNGTC	1 cut(s)	1647
EarI	CTCTTC	3 cut(s)	24, 327, 1977
EciI	GGCGGA	1 cut(s)	983
Ecl136II	GAGCTC	1 cut(s)	2408
Eco130I	CCWWGG	2 cut(s)	171, 2467
Eco147I	AGGCCT	1 cut(s)	1394
Eco24I	GRGCYC	1 cut(s)	2410
Eco31I	GGTCTC	2 cut(s)	1322, 1460
Eco32I	GATATC	1 cut(s)	1556
Eco47I	GGWCC	2 cut(s)	1272, 1954
Eco53kI	GAGCTC	1 cut(s)	2408
Eco57I	CTGAAG	8 cut(s)	516, 642, 879, 975, 999, 1062, 1076, 1092
Eco72I	CACGTG	1 cut(s)	2219
Eco81I	CCTNAGG	1 cut(s)	1155
EcoICRI	GAGCTC	1 cut(s)	2408
EcoO109I	RGGNCCY	1 cut(s)	1103
EcoRII	CCWGG	2 cut(s)	994, 1394
EcoRV	GATATC	1 cut(s)	1556
EcoT14I	CCWWGG	2 cut(s)	171, 2467
EcoT22I	ATGCAT	1 cut(s)	2279
EcoT38I	GRGCYC	1 cut(s)	2410
ErhI	CCWWGG	2 cut(s)	171, 2467
Esp3I	CGTCTC	1 cut(s)	1786
FaeI	CATG	7 cut(s)	134, 941, 1013, 1325, 1459, 2264, 2696
FalI	AAGNNNNNCTT	2 cut(s)	2124, 2156
FaqI	GGGAC	3 cut(s)	37, 1967, 2632
FatI	CATG	7 cut(s)	130, 937, 1009, 1321, 1455, 2260, 2692
FauNDI	CATATG	1 cut(s)	1277
FbaI	TGATCA	1 cut(s)	1477
FblI	GTMKAC	2 cut(s)	1604, 2324
Fnu4HI	GCNGC	7 cut(s)	111, 216, 507, 2157, 2502, 2579, 2690
FokI	GGATG	6 cut(s)	416, 787, 1123, 1136, 2522, 2652
FriOI	GRGCYC	1 cut(s)	2410
Fsp4HI	GCNGC	7 cut(s)	111, 216, 507, 2157, 2502, 2579, 2690
FspBI	CTAG	7 cut(s)	351, 387, 468, 1185, 1728, 1872, 2231
FspI	TGCGCA	1 cut(s)	2566
GlaI	GCGC	1 cut(s)	2566
GluI	GCNGC	7 cut(s)	111, 216, 507, 2157, 2502, 2579, 2690
GsuI	CTGGAG	6 cut(s)	543, 576, 765, 1017, 1104, 2385
HaeIII	GGCC	8 cut(s)	6, 296, 1105, 1394, 1407, 1527, 2466, 2628
HapII	CCGG	2 cut(s)	326, 1266
HgaI	GACGC	1 cut(s)	1919
HhaI	GCGC	1 cut(s)	2567
Hin1I	GRCGYC	1 cut(s)	1607
Hin1II	CATG	7 cut(s)	134, 941, 1013, 1325, 1459, 2264, 2696
Hin6I	GCGC	1 cut(s)	2565
HinP1I	GCGC	1 cut(s)	2565
HincII	GTYRAC	2 cut(s)	1605, 2389
HindII	GTYRAC	2 cut(s)	1605, 2389
HindIII	AAGCTT	2 cut(s)	2027, 2417
HpaII	CCGG	2 cut(s)	326, 1266
HphI	GGTGA	5 cut(s)	779, 1013, 1367, 1646, 2654
Hpy166II	GTNNAC	5 cut(s)	428, 1605, 2325, 2389, 2512
Hpy8I	GTNNAC	5 cut(s)	428, 1605, 2325, 2389, 2512
Hpy99I	CGWCG	2 cut(s)	1609, 2544
HpyAV	CCTTC	8 cut(s)	357, 922, 1051, 1116, 2146, 2200, 2602, 2652
HpyCH4III	ACNGT	9 cut(s)	208, 238, 441, 578, 669, 906, 1924, 2395, 2487
HpyCH4IV	ACGT	3 cut(s)	1607, 2218, 2295
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1208, 1775, 2153, 2463
HpySE526I	ACGT	3 cut(s)	1607, 2218, 2295
Hsp92I	GRCGYC	1 cut(s)	1607
Hsp92II	CATG	7 cut(s)	134, 941, 1013, 1325, 1459, 2264, 2696
HspAI	GCGC	1 cut(s)	2565
Kpn2I	TCCGGA	1 cut(s)	325
Ksp22I	TGATCA	1 cut(s)	1477
Kzo9I	GATC	3 cut(s)	61, 473, 1477
LguI	GCTCTTC	1 cut(s)	24
LmnI	GCTCC	6 cut(s)	746, 2366, 2405, 2413, 2426, 2436
Lsp1109I	GCAGC	7 cut(s)	97, 202, 518, 2143, 2488, 2590, 2676
LweI	GCATC	4 cut(s)	97, 616, 853, 2564
MaeI	CTAG	7 cut(s)	351, 387, 468, 1185, 1728, 1872, 2231
MaeII	ACGT	3 cut(s)	1607, 2218, 2295
MaeIII	GTNAC	6 cut(s)	578, 1126, 1710, 1772, 1916, 2335
MalI	GATC	3 cut(s)	63, 475, 1479
MboI	GATC	3 cut(s)	61, 473, 1477
MfeI	CAATTG	1 cut(s)	458
MhlI	GDGCHC	1 cut(s)	2410
MlyI	GAGTC	9 cut(s)	569, 583, 714, 820, 1040, 1657, 1994, 2330, 2486
MmeI	TCCRAC	3 cut(s)	630, 2460, 2563
Mph1103I	ATGCAT	1 cut(s)	2279
MroI	TCCGGA	1 cut(s)	325
MroXI	GAANNNNTTC	2 cut(s)	1792, 1936
MseI	TTAA	5 cut(s)	279, 852, 1146, 1302, 2226
MslI	CAYNNNNRTG	3 cut(s)	135, 1341, 2560
MspA1I	CMGCKG	4 cut(s)	807, 1054, 2501, 2593
MspI	CCGG	2 cut(s)	326, 1266
MspR9I	CCNGG	2 cut(s)	996, 1396
MunI	CAATTG	1 cut(s)	458
Mva1269I	GAATGC	4 cut(s)	396, 1252, 1692, 1836
MvaI	CCWGG	2 cut(s)	996, 1396
MvnI	CGCG	1 cut(s)	2457
MwoI	GCNNNNNNNGC	4 cut(s)	1208, 1775, 2153, 2463
NdeI	CATATG	1 cut(s)	1277
NdeII	GATC	3 cut(s)	61, 473, 1477
NlaIII	CATG	7 cut(s)	134, 941, 1013, 1325, 1459, 2264, 2696
NlaIV	GGNNCC	8 cut(s)	100, 435, 993, 1064, 1096, 1955, 2175, 2465
NmuCI	GTSAC	2 cut(s)	1126, 1710
NruI	TCGCGA	1 cut(s)	2457
NsbI	TGCGCA	1 cut(s)	2566
NsiI	ATGCAT	1 cut(s)	2279
NspI	RCATGY	1 cut(s)	1459
PaeI	GCATGC	1 cut(s)	1459
PceI	AGGCCT	1 cut(s)	1394
PciSI	GCTCTTC	1 cut(s)	24
PctI	GAATGC	4 cut(s)	396, 1252, 1692, 1836
PdmI	GAANNNNTTC	2 cut(s)	1792, 1936
PfeI	GAWTC	6 cut(s)	656, 1376, 1706, 1850, 2086, 2249
PflFI	GACNNNGTC	1 cut(s)	796
PkrI	GCNGC	7 cut(s)	112, 217, 508, 2158, 2503, 2580, 2691
PleI	GAGTC	9 cut(s)	568, 583, 713, 820, 1040, 1656, 1993, 2329, 2485
PmaCI	CACGTG	1 cut(s)	2219
PmlI	CACGTG	1 cut(s)	2219
PpsI	GAGTC	9 cut(s)	568, 583, 713, 820, 1040, 1656, 1993, 2329, 2485
Ppu21I	YACGTR	1 cut(s)	2219
PshBI	ATTAAT	1 cut(s)	852
Psp124BI	GAGCTC	1 cut(s)	2410
Psp1406I	AACGTT	1 cut(s)	2295
Psp6I	CCWGG	2 cut(s)	994, 1394
PspCI	CACGTG	1 cut(s)	2219
PspGI	CCWGG	2 cut(s)	994, 1394
PspN4I	GGNNCC	8 cut(s)	100, 435, 993, 1064, 1096, 1955, 2175, 2465
PspPI	GGNCC	8 cut(s)	4, 295, 1103, 1272, 1526, 1954, 2464, 2627
PstI	CTGCAG	1 cut(s)	508
PstNI	CAGNNNCTG	1 cut(s)	1913
PsyI	GACNNNGTC	1 cut(s)	796
PvuII	CAGCTG	3 cut(s)	1054, 2501, 2593
RruI	TCGCGA	1 cut(s)	2457
RsaI	GTAC	2 cut(s)	240, 2190
RsaNI	GTAC	2 cut(s)	239, 2189
RseI	CAYNNNNRTG	3 cut(s)	135, 1341, 2560
SacI	GAGCTC	1 cut(s)	2410
SalI	GTCGAC	1 cut(s)	1603
SapI	GCTCTTC	1 cut(s)	24
SaqAI	TTAA	5 cut(s)	279, 852, 1146, 1302, 2226
SatI	GCNGC	7 cut(s)	111, 216, 507, 2157, 2502, 2579, 2690
Sau3AI	GATC	3 cut(s)	61, 473, 1477
Sau96I	GGNCC	8 cut(s)	4, 295, 1103, 1272, 1526, 1954, 2464, 2627
SchI	GAGTC	9 cut(s)	569, 583, 714, 820, 1040, 1657, 1994, 2330, 2486
ScrFI	CCNGG	2 cut(s)	996, 1396
SduI	GDGCHC	1 cut(s)	2410
SfaNI	GCATC	4 cut(s)	97, 616, 853, 2564
SfcI	CTRYAG	2 cut(s)	504, 1206
SinI	GGWCC	2 cut(s)	1272, 1954
SmiMI	CAYNNNNRTG	3 cut(s)	135, 1341, 2560
SmlI	CTYRAG	2 cut(s)	269, 828
SmoI	CTYRAG	2 cut(s)	269, 828
SpeI	ACTAGT	1 cut(s)	1184
SphI	GCATGC	1 cut(s)	1459
SseBI	AGGCCT	1 cut(s)	1394
SsiI	CCGC	4 cut(s)	807, 968, 2318, 2639
SspMI	CTAG	7 cut(s)	351, 387, 468, 1185, 1728, 1872, 2231
SstI	GAGCTC	1 cut(s)	2410
StuI	AGGCCT	1 cut(s)	1394
StyD4I	CCNGG	2 cut(s)	994, 1394
StyI	CCWWGG	2 cut(s)	171, 2467
TaaI	ACNGT	9 cut(s)	208, 238, 441, 578, 669, 906, 1924, 2395, 2487
TaiI	ACGT	3 cut(s)	1610, 2221, 2298
TaqI	TCGA	3 cut(s)	494, 612, 1604
TaqII	GACCGA	1 cut(s)	1145
TatI	WGTACW	2 cut(s)	238, 2188
TfiI	GAWTC	6 cut(s)	656, 1376, 1706, 1850, 2086, 2249
Tru1I	TTAA	5 cut(s)	279, 852, 1146, 1302, 2226
Tru9I	TTAA	5 cut(s)	279, 852, 1146, 1302, 2226
TscAI	CASTG	5 cut(s)	444, 589, 1927, 2142, 2398
TseFI	GTSAC	2 cut(s)	1126, 1710
TseI	GCWGC	7 cut(s)	110, 215, 506, 2156, 2501, 2578, 2689
Tsp45I	GTSAC	2 cut(s)	1126, 1710
TspDTI	ATGAA	7 cut(s)	119, 276, 954, 1068, 1356, 1995, 2082
TspGWI	ACGGA	1 cut(s)	2686
TspRI	CASTG	5 cut(s)	444, 589, 1927, 2142, 2398
Tth111I	GACNNNGTC	1 cut(s)	796
VpaK11BI	GGWCC	2 cut(s)	1272, 1954
VspI	ATTAAT	1 cut(s)	852
XapI	RAATTY	5 cut(s)	838, 1669, 1758, 1813, 1902
XceI	RCATGY	1 cut(s)	1459
XcmI	CCANNNNNNNNNTGG	1 cut(s)	740
XmiI	GTMKAC	2 cut(s)	1604, 2324
XmnI	GAANNNNTTC	2 cut(s)	1792, 1936
XspI	CTAG	7 cut(s)	351, 387, 468, 1185, 1728, 1872, 2231
ZraI	GACGTC	1 cut(s)	1608
Zsp2I	ATGCAT	1 cut(s)	2279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.