Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0016929.1

Orthogroup ID

OG0007376

Physical Location & Seq

Genomic Coordinates Forward (+)

4251 .. 10273

Gene Structure 6023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0016929.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5127 bp

ctggtggcgtctccggcctttgttttctccgcccttccaccgggaagcggcggagcaagtgactctcaaatgctacaacgaaaacgcactaagaagggtggagatatctcttcagatcttgaagctcttcgtatggaggaccttgattctactgttaaggctactccaccttcccactcggatgcgagctatgctagcaagctcaaaaacccagttgaccgctacagtagaacgatgatggaggattttgagctcaccgatgaggattgtatctacactcaaggcaagcatggccagaatctcatgggtaagccaaactctgttaacacttttgatttcatgcttaagggactacgaaggaagtggcaagtcaaagggggctggcaagtgcccataaacccttgttacttatatgggttgaggcggtcctccttgtttcgatggtcagcttctagaaggtttatcttgggtggcagggaccggttttattaccgggttcaggaatgcggtccgggtcctggttgttatgagctgtcttgctcacttagtgagaggagtggttacaatagaggaaaggggagatgtggttgtgtggttgatgaggagggggagagtgaggtttgcgattcggatggttttagtgatgtggagtctgtgcttagcttgctgagtgaggaagtgggtgaggagcgttttggtagggagagaaatgggtttaagagagcagggctggagggtaggaggagaaatgtgggttcgtcgtctaagagagtggaagaggagagtaggaggagtttgagtggtagtcggagaaatgtgggttcgtctaagagagtagaagaggacagtaggaggagtttgagtggtggtaagagaaatgtgagttcgtcgaagagcgtagaagctgagaggaggagttttgttggtagagagaaaagtgagagttccgttaagggaagagagaaaattgagagtgtatcgaagggagtgcaagtagattttgaagaaactaatagaagtgagtgtagcagtggggagaagaaaagtaacggtaggtactcatctttggagagtaattcaaagcaccgattggaatcaactagagtcgagttaagtgaaaaagattctagacagaaagaagagacgggactgcttttaagagctgaaaatcataggggaaggaaagagggttccagtggttcatcttattactccttgtcttcaggggattttggaagtgaggcagatgtccatgataagcatggccttttggaggaaccaggttcaagtgtgcttaaggattcccactatgatagaggtagatttgatgggcgaatcagtgaagagtacaggaaccgtagagatgatgctgaggccaatagtgaaatatcgaagcagagaaatactgcagttgaggggggtggcatgtgggattggaggaagaagtcagaaaagaagctcacagaagtagtgattgaagaaacacaagcatcaaggaaatcctcagaaaagcattcaagagtattgaagaccaatgaaagtgagttagcaaaggcctctgggtcacacaagcagtttaatgatgagagggagaattcatatttgacttggggaacaaaagaacaatataggcgaacagggaacgaagatattgttgagactgaatccagaagaaaatttcaagaaggcaaagagaaattagaagtccatagaactgatgctgaaacatcattgcggtcccaaaagagacttagtgacagggaacaaaacctagctatggctacaaacttagtacaggagacaagagatgaacattacaagacgactggccatatcactcaaagggaagatttgaatattgacatccaaaagctctcaagagtttcacaagttcaagttgttgataccgaaaggacctccaatcggcggcggcagtctgatacaaggattaaccaggaagaaaacacaaatatgggcctgatttcagttgaggggacagaagagcaatgccaccaaataagccatcaattagatcaaaaagttattcagagagttcaatccagaaaaggaaccaatgatgctgccgaaatgtcgtatgttcatgcaagtgatacagcaagaaataccaattcccaaagaacctttgacaagagaactaccaatcaaggaagtattacagtattggctgcaacatcagttgaggaaacagtacagagaaataatcaaactgatgaaaagctcaagcaagttaaatcaagaaaagaggcccaaagttcaacagaagtatcaactcttccggaaaaatactcgggagaaccttctagtttccaagtatctttgagtatggtttcccaagctagaatgcaacgggaggatgttgaggggcataagggaagtccacaggcaccactgctgcctccccctcctcaattgattgctagaggatcggcacgcattgagttgtcgagtgtgactgcaactcaggaggtttctggagaaacttcagagagtaattcagctctgaactatgagtcttgtggtggaaacagtaacactgagactccagcagagattttatacctcgataatcctgaagatgctttgggttcagctcatcggttggaggaatcatcttcacagtttattggggagttctgtgagaaaattagatatggagtctcaacttctgaaaaccagactgcccagagagtttctggagcaactttggtgtatggaggtgagaagtatgggcaaaagactttgacttcgtcatccagcggaaatggaactgatgagactcaaggggaaaattcctacctcattaatcctgaagatgctttgggttcagctcagcgtttggagaagtcatcttcacagtttgttggggagttctctgagaaggcaaggcatgaagcctcaacttctgaagaatatggggcggagatttctgaagcaaaatggatgcctggaggtgagaagcatggtcaaataacttcaagtcaatatgggtctgaagactctcagctgaaggggaaccagtcaaggcgttcatctggaggttctggaaccaaagggccttcagttgaaatgtgggatgtgaccgacacatccactcttaaaagccctgaggaagaaaaaccagaggctactacaactagtgaaaaatcagaggctactacagcaagtgaaaaattagaggctactactacaagtgggaatgccgttgccaagaaaaccggcaggtccatatggaatgttgttgcagatatagttaagctgaggtggatttctcatgctgagacctatcattctggtgcaaggtcaggtgaaaggatttcatcaactgaatctggaagtagtgaggcctggttttctggccgtgagactgaggagaacagcgaaaagaatgtgaaacgggagaaaggcatgcaaccagagaccacctctgatcagctacgaccagcgaaatcattttctcaaagtgaaaaagtgtctggccctgtgaaatcaaaggacaaagtaagatatcttgaaacaagtatgacatcttctccaaataaagaggaaagtaggtcgacgtcaaaatctgtttccttgtcttctggtgaggagactttgagtccgaaagataatcaaaagaatttccgaggttcttcttctggcattcagattgttgaatcgtcacaatcacaaattgctagtggcataaagtctcctgttgtggaagaaatttcaaatgctggttacgctgtctctggaagtgtttcaaaagataaccaaaagaattttagaggttcttcttctggcattcaaatagttgaatcatcacaatcacaaattgctagtggcataaagtctcctgttgtggaagaaatttcaaatgctggttacgctgtctctggaagtgtttcaaaagataaccaaaagaattttagaggttcttcttctggcattcaaatagttgaatcatcacaatcacaaattgctagtggcataaagtctcctgttgtggaagaaatttcaaatgctggttacgctgtctctggaagtgtttcaaaagataaccaaaagaattttagaggttcttcttctggcattcaaatagttgaatcatcacaatcacaaattgctagtggcataaagtctcctgttgtggaagaaatttcaaatgctggttacgctgtctctggaagtgtttcaaaagataaccaaaagaattttagaggttcttcttctggcattcaaatagttgaatcatcacaatcacaaattgctagtggcataaagtatcctgttgtggaagaaatttcagacgctggttacactgtttctggaagtggttcagaggagaacagggaccaatttggttgtcagcagtttgatgaagagtcagacaatgtgcaaaagggtgcagaattgaaacaaaggaagcttcaaaggaataagcaagtcctgaaagacagatttgatgaatgggaagaagctcagaatcttgaaattgaacagagaaaaacagatgagttttttatgagagaagcactgcttgaagcgaagaaggctgctgatacttgggaggttcctgttggtgctgtactggtgcaacaggggaaggttattgcacgtggatttaacctagtggaagaattacgagattcaacagcccatgctgaaatgatatgcatacgggaggcttcaaacgttcttcggacttggaggcttgcggagtctacactttatgtaacacttgaaccctgccctatgtgtgctggagcaattcttcaagcaagagttgacactgttgtatggggagctcctaataagcttcttggagctgatgggagctggatacgactttttcgcgatgggggccaaggaagtgagtcggaacagtcagaaaagccagctgcaccagtccacccattccacccgaacataaccatccgacgaggcgtgttggcatcagagtgcgcagatataatgcagcaattcttccagctgagaagaaaaaagaaggaaaagaggcaggcaggcccaccagcaccgccttcgtcccgtgctgtttctcaccatccacggaagatacttacgaagctgcatgacatcttccacataatgttctgtttatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002097 GO:0002100 GO:0003674 GO:0003824 GO:0004000 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006382 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008251 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016553 GO:0016787 GO:0016810 GO:0016814 GO:0019239 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071944 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MafB19-deam dCMP_cyt_deam_1

Protein Analysis

1708

Amino Acids

188.39

Weight (kDa)

6.29

Isoelectric Point (pI)

56.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68720
fragaria_vesca	FvH4_4g28440 FvH4_4g28440 FvH4_4g28440
malus_domestica	MD13G1050100.v1.1 MD13G1050300.v1.1 MD16G1051000.v1.1
prunus_persica	Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1 Prupe.1G301600_v2.0.a1
pyrus_communis	pycom13g04440 pycom16g04480
rosa_chinensis	RchiOBHm_Chr4g0436391 RchiOBHm_Chr4g0436401
rosa_laevigata	RLG00000006522
rosa_multiflora	Rmu_co8246795.1_g000001 Rmu_co8256611.1_g000001 Rmu_sc0010255.1_g000001 Rmu_sc0016929.1_g000003
rosa_roxburghii	Rroxscaffold_5G00377560
rosa_rugosa	Rorug04G0293500
rosa_samantha	Rh4AG347800 Rh4BG356600 Rh4CG371200
rosa_wichuraiana	Rw4G030410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	3581
Acc16I	TGCGCA	1 cut(s)	4969
Acc36I	ACCTGC	1 cut(s)	3231
AccB1I	GGYRCC	1 cut(s)	2404
AccI	GTMKAC	2 cut(s)	3575, 4727
AccII	CGCG	1 cut(s)	4860
AccIII	TCCGGA	1 cut(s)	2296
AclI	AACGTT	1 cut(s)	4698
AclWI	GGATC	1 cut(s)	2452
AcoI	YGGCCR	3 cut(s)	292, 1828, 3376
AcvI	CACGTG	1 cut(s)	4622
AcyI	GRCGYC	2 cut(s)	8, 3578
AdeI	CACNNNGTG	1 cut(s)	548
AfaI	GTAC	5 cut(s)	1058, 1349, 1794, 2211, 4593
AfiI	CCNNNNNNNGG	8 cut(s)	40, 47, 499, 518, 1273, 1777, 1923, 1926
AflII	CTTAAG	2 cut(s)	344, 1295
AgeI	ACCGGT	1 cut(s)	480
AhdI	GACNNNNNGTC	1 cut(s)	3618
AhlI	ACTAGT	1 cut(s)	3155
AjnI	CCWGG	5 cut(s)	517, 1279, 1953, 2965, 3365
AloI	GAACNNNNNNTCC	2 cut(s)	1174, 1206
Alw21I	GWGCWC	2 cut(s)	255, 4813
AlwI	GGATC	1 cut(s)	2452
AlwNI	CAGNNNCTG	1 cut(s)	4316
Ama87I	CYCGRG	1 cut(s)	2308
Aor13HI	TCCGGA	1 cut(s)	2296
ApeKI	GCWGC	7 cut(s)	2081, 2186, 2413, 4559, 4904, 4981, 5092
ArsI	GACNNNNNNTTYG	2 cut(s)	2749, 2781
AseI	ATTAAT	1 cut(s)	2823
AsiGI	ACCGGT	1 cut(s)	480
Asp700I	GAANNNNTTC	6 cut(s)	126, 3763, 3907, 4051, 4195, 4339
AspLEI	GCGC	1 cut(s)	4970
AsuC2I	CCSGG	3 cut(s)	42, 494, 513
AsuHPI	GGTGA	7 cut(s)	247, 695, 2750, 2984, 3338, 3617, 5057
AsuNHI	GCTAGC	1 cut(s)	194
AvaI	CYCGRG	1 cut(s)	2308
AvaII	GGWCC	9 cut(s)	139, 426, 478, 509, 515, 1737, 1914, 3243, 4357
AxyI	CCTNAGG	1 cut(s)	3126
BaeGI	GKGCMC	1 cut(s)	393
BaeI	ACNNNNGTAYC	2 cut(s)	2268, 2301
BalI	TGGCCA	2 cut(s)	294, 1830
BanI	GGYRCC	1 cut(s)	2404
BanII	GRGCYC	2 cut(s)	255, 4813
BarI	GAAGNNNNNNTAC	4 cut(s)	2277, 2309, 3532, 3564
BbrPI	CACGTG	1 cut(s)	4622
BbsI	GAAGAC	4 cut(s)	1212, 1535, 3021, 3591
Bbv12I	GWGCWC	2 cut(s)	255, 4813
BbvCI	CCTCAGC	2 cut(s)	1371, 3278
BbvI	GCAGC	7 cut(s)	2068, 2173, 2400, 4546, 4891, 4993, 5079
BccI	CCATC	9 cut(s)	232, 435, 626, 1322, 2031, 4829, 4856, 4946, 5076
BceAI	ACGGC	2 cut(s)	3206, 3363
BcgI	CGANNNNNNTGC	4 cut(s)	970, 1004, 5028, 5062
BciT130I	CCWGG	5 cut(s)	519, 1281, 1955, 2967, 3367
BciVI	GTATCC	2 cut(s)	4299, 4839
BclI	TGATCA	1 cut(s)	3448
BcnI	CCSGG	3 cut(s)	42, 494, 513
BcuI	ACTAGT	1 cut(s)	3155
BfmI	CTRYAG	3 cut(s)	223, 1407, 3177
BfrI	CTTAAG	2 cut(s)	344, 1295
BfuAI	ACCTGC	1 cut(s)	3231
BfuI	GTATCC	2 cut(s)	4299, 4839
BglII	AGATCT	1 cut(s)	115
BlpI	GCTNAGC	2 cut(s)	659, 2850
Bme1390I	CCNGG	8 cut(s)	42, 494, 513, 519, 1281, 1955, 2967, 3367
Bme18I	GGWCC	9 cut(s)	139, 426, 478, 509, 515, 1737, 1914, 3243, 4357
BmeRI	GACNNNNNGTC	1 cut(s)	3618
BmeT110I	CYCGRG	1 cut(s)	2308
BmrFI	CCNGG	8 cut(s)	42, 494, 513, 519, 1281, 1955, 2967, 3367
BmrI	ACTGGG	1 cut(s)	206
BmsI	GCATC	9 cut(s)	172, 1357, 1499, 1708, 2068, 2587, 2824, 2952, 4967
BmtI	GCTAGC	1 cut(s)	198
BmuI	ACTGGG	1 cut(s)	206
BpiI	GAAGAC	4 cut(s)	1212, 1535, 3021, 3591
BplI	GAGNNNNNCTC	2 cut(s)	3428, 3460
BpmI	CTGGAG	7 cut(s)	752, 2514, 2547, 2736, 2988, 3075, 4788
Bpu10I	CCTNAGC	2 cut(s)	1371, 3278
Bpu1102I	GCTNAGC	2 cut(s)	659, 2850
BpuEI	CTTGAG	4 cut(s)	264, 1861, 2225, 2784
BpuMI	CCSGG	3 cut(s)	42, 494, 513
BsaAI	YACGTR	1 cut(s)	4622
BsaBI	GATNNNNATC	1 cut(s)	1093
BsaHI	GRCGYC	2 cut(s)	8, 3578
BsaI	GGTCTC	2 cut(s)	3293, 3431
BsaJI	CCNNGG	3 cut(s)	3646, 4870, 5072
BsaWI	WCCGGW	2 cut(s)	480, 2296
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 47, 499, 518, 1273, 1777, 1923, 1926
Bse118I	RCCGGY	2 cut(s)	480, 3236
Bse1I	ACTGG	6 cut(s)	212, 1194, 1831, 3037, 4599, 4910
Bse21I	CCTNAGG	1 cut(s)	3126
Bse3DI	GCAATG	2 cut(s)	1730, 2012
Bse8I	GATNNNNATC	1 cut(s)	1093
BseAI	TCCGGA	1 cut(s)	2296
BseBI	CCWGG	5 cut(s)	519, 1281, 1955, 2967, 3367
BseDI	CCNNGG	3 cut(s)	3646, 4870, 5072
BseJI	GATNNNNATC	1 cut(s)	1093
BseLI	CCNNNNNNNGG	8 cut(s)	40, 47, 499, 518, 1273, 1777, 1923, 1926
BseMI	GCAATG	2 cut(s)	1730, 2012
BseNI	ACTGG	6 cut(s)	212, 1194, 1831, 3037, 4599, 4910
BseSI	GKGCMC	1 cut(s)	393
BseXI	GCAGC	7 cut(s)	2068, 2173, 2400, 4546, 4891, 4993, 5079
BsgI	GTGCAG	2 cut(s)	4431, 4890
Bsh1236I	CGCG	1 cut(s)	4860
BshNI	GGYRCC	1 cut(s)	2404
BshTI	ACCGGT	1 cut(s)	480
BsiHKAI	GWGCWC	2 cut(s)	255, 4813
BsiHKCI	CYCGRG	1 cut(s)	2308
BsiSI	CCGG	7 cut(s)	14, 41, 481, 493, 512, 2297, 3237
BslFI	GGGAC	7 cut(s)	363, 491, 1161, 1723, 2008, 4370, 5035
BslI	CCNNNNNNNGG	8 cut(s)	40, 47, 499, 518, 1273, 1777, 1923, 1926
BsmBI	CGTCTC	2 cut(s)	15, 1136
BsmFI	GGGAC	7 cut(s)	363, 491, 1161, 1723, 2008, 4370, 5035
BsmI	GAATGC	9 cut(s)	509, 1513, 2367, 3223, 3663, 3807, 3951, 4095, 4239
Bso31I	GGTCTC	2 cut(s)	3293, 3431
BsoBI	CYCGRG	1 cut(s)	2308
Bsp1286I	GDGCHC	3 cut(s)	255, 393, 4813
Bsp13I	TCCGGA	1 cut(s)	2296
Bsp143I	GATC	4 cut(s)	115, 2032, 2444, 3448
Bsp1720I	GCTNAGC	2 cut(s)	659, 2850
Bsp68I	TCGCGA	1 cut(s)	4860
BspEI	TCCGGA	1 cut(s)	2296
BspFNI	CGCG	1 cut(s)	4860
BspMAI	CTGCAG	1 cut(s)	1411
BspMI	ACCTGC	1 cut(s)	3231
BspOI	GCTAGC	1 cut(s)	198
BspPI	GGATC	1 cut(s)	2452
BspQI	GCTCTTC	3 cut(s)	132, 887, 1995
BspT107I	GGYRCC	1 cut(s)	2404
BspTI	CTTAAG	2 cut(s)	344, 1295
BspTNI	GGTCTC	2 cut(s)	3293, 3431
BsrDI	GCAATG	2 cut(s)	1730, 2012
BsrFI	RCCGGY	2 cut(s)	480, 3236
BsrI	ACTGG	6 cut(s)	212, 1194, 1831, 3037, 4599, 4910
BssAI	RCCGGY	2 cut(s)	480, 3236
BssECI	CCNNGG	3 cut(s)	3646, 4870, 5072
BssMI	GATC	4 cut(s)	115, 2032, 2444, 3448
BssNI	GRCGYC	2 cut(s)	8, 3578
BssT1I	CCWWGG	1 cut(s)	4870
Bst2UI	CCWGG	5 cut(s)	519, 1281, 1955, 2967, 3367
BstACI	GRCGYC	2 cut(s)	8, 3578
BstAFI	CTTAAG	2 cut(s)	344, 1295
BstBAI	YACGTR	1 cut(s)	4622
BstDSI	CCRYGG	1 cut(s)	5072
BstENI	CCTNNNNNAGG	1 cut(s)	1271
BstFNI	CGCG	1 cut(s)	4860
BstHHI	GCGC	1 cut(s)	4970
BstKTI	GATC	4 cut(s)	118, 2035, 2447, 3451
BstMBI	GATC	4 cut(s)	115, 2032, 2444, 3448
BstNI	CCWGG	5 cut(s)	519, 1281, 1955, 2967, 3367
BstNSI	RCATGY	2 cut(s)	1429, 3430
BstSCI	CCNGG	8 cut(s)	40, 492, 511, 517, 1279, 1953, 2965, 3365
BstSFI	CTRYAG	3 cut(s)	223, 1407, 3177
BstSLI	GKGCMC	1 cut(s)	393
BstUI	CGCG	1 cut(s)	4860
BstV1I	GCAGC	7 cut(s)	2068, 2173, 2400, 4546, 4891, 4993, 5079
BstV2I	GAAGAC	4 cut(s)	1212, 1535, 3021, 3591
BstX2I	RGATCY	1 cut(s)	115
BstYI	RGATCY	1 cut(s)	115
Bsu36I	CCTNAGG	1 cut(s)	3126
BsuI	GTATCC	2 cut(s)	4299, 4839
BtgI	CCRYGG	1 cut(s)	5072
BtgZI	GCGATG	1 cut(s)	4875
BtsI	GCAGTG	3 cut(s)	1036, 2408, 4538
BtsIMutI	CAGTG	8 cut(s)	1036, 1201, 1345, 2408, 2553, 4323, 4538, 4794
BtuMI	TCGCGA	1 cut(s)	4860
BveI	ACCTGC	1 cut(s)	3231
CaiI	CAGNNNCTG	1 cut(s)	4316
CfoI	GCGC	1 cut(s)	4970
Cfr10I	RCCGGY	2 cut(s)	480, 3236
CpoI	CGGWCCG	1 cut(s)	509
CseI	GACGC	1 cut(s)	4322
CsiI	ACCWGGT	1 cut(s)	1279
Csp6I	GTAC	5 cut(s)	1057, 1348, 1793, 2210, 4592
CspAI	ACCGGT	1 cut(s)	480
CspI	CGGWCCG	1 cut(s)	509
CviQI	GTAC	5 cut(s)	1057, 1348, 1793, 2210, 4592
DpnI	GATC	4 cut(s)	117, 2034, 2446, 3450
DpnII	GATC	4 cut(s)	115, 2032, 2444, 3448
DraIII	CACNNNGTG	1 cut(s)	548
DriI	GACNNNNNGTC	1 cut(s)	3618
EaeI	YGGCCR	3 cut(s)	292, 1828, 3376
Eam1105I	GACNNNNNGTC	1 cut(s)	3618
EciI	GGCGGA	3 cut(s)	19, 66, 2954
Ecl136II	GAGCTC	2 cut(s)	253, 4811
Eco130I	CCWWGG	1 cut(s)	4870
Eco147I	AGGCCT	2 cut(s)	1556, 3365
Eco24I	GRGCYC	2 cut(s)	255, 4813
Eco31I	GGTCTC	2 cut(s)	3293, 3431
Eco32I	GATATC	2 cut(s)	106, 3527
Eco47I	GGWCC	9 cut(s)	139, 426, 478, 509, 515, 1737, 1914, 3243, 4357
Eco53kI	GAGCTC	2 cut(s)	253, 4811
Eco72I	CACGTG	1 cut(s)	4622
Eco81I	CCTNAGG	1 cut(s)	3126
Eco88I	CYCGRG	1 cut(s)	2308
EcoICRI	GAGCTC	2 cut(s)	253, 4811
EcoNI	CCTNNNNNAGG	1 cut(s)	1271
EcoO109I	RGGNCCY	4 cut(s)	139, 515, 1914, 3074
EcoRI	GAATTC	1 cut(s)	1594
EcoRII	CCWGG	5 cut(s)	517, 1279, 1953, 2965, 3365
EcoRV	GATATC	2 cut(s)	106, 3527
EcoT14I	CCWWGG	1 cut(s)	4870
EcoT22I	ATGCAT	1 cut(s)	4682
EcoT38I	GRGCYC	2 cut(s)	255, 4813
ErhI	CCWWGG	1 cut(s)	4870
Esp3I	CGTCTC	2 cut(s)	15, 1136
FalI	AAGNNNNNCTT	2 cut(s)	4527, 4559
FaqI	GGGAC	7 cut(s)	363, 491, 1161, 1723, 2008, 4370, 5035
FauNDI	CATATG	1 cut(s)	3248
FbaI	TGATCA	1 cut(s)	3448
FblI	GTMKAC	2 cut(s)	3575, 4727
FriOI	GRGCYC	2 cut(s)	255, 4813
FspI	TGCGCA	1 cut(s)	4969
GlaI	GCGC	1 cut(s)	4969
GsuI	CTGGAG	7 cut(s)	752, 2514, 2547, 2736, 2988, 3075, 4788
HapII	CCGG	7 cut(s)	14, 41, 481, 493, 512, 2297, 3237
HgaI	GACGC	1 cut(s)	4322
HhaI	GCGC	1 cut(s)	4970
Hin1I	GRCGYC	2 cut(s)	8, 3578
Hin6I	GCGC	1 cut(s)	4968
HinP1I	GCGC	1 cut(s)	4968
HincII	GTYRAC	4 cut(s)	217, 325, 3576, 4792
HindII	GTYRAC	4 cut(s)	217, 325, 3576, 4792
HindIII	AAGCTT	2 cut(s)	4430, 4820
HpaI	GTTAAC	1 cut(s)	325
HpaII	CCGG	7 cut(s)	14, 41, 481, 493, 512, 2297, 3237
HphI	GGTGA	7 cut(s)	247, 695, 2750, 2984, 3338, 3617, 5057
Hpy166II	GTNNAC	7 cut(s)	217, 325, 2399, 3576, 4728, 4792, 4915
Hpy8I	GTNNAC	7 cut(s)	217, 325, 2399, 3576, 4728, 4792, 4915
Hpy99I	CGWCG	4 cut(s)	763, 892, 3580, 4947
HpyCH4IV	ACGT	3 cut(s)	3578, 4621, 4698
HpySE526I	ACGT	3 cut(s)	3578, 4621, 4698
Hsp92I	GRCGYC	2 cut(s)	8, 3578
HspAI	GCGC	1 cut(s)	4968
Kpn2I	TCCGGA	1 cut(s)	2296
Ksp22I	TGATCA	1 cut(s)	3448
KspAI	GTTAAC	1 cut(s)	325
Kzo9I	GATC	4 cut(s)	115, 2032, 2444, 3448
LguI	GCTCTTC	3 cut(s)	132, 887, 1995
LmnI	GCTCC	8 cut(s)	53, 688, 2717, 4769, 4808, 4816, 4829, 4839
Lsp1109I	GCAGC	7 cut(s)	2068, 2173, 2400, 4546, 4891, 4993, 5079
LweI	GCATC	9 cut(s)	172, 1357, 1499, 1708, 2068, 2587, 2824, 2952, 4967
MabI	ACCWGGT	1 cut(s)	1279
MaeII	ACGT	3 cut(s)	3578, 4621, 4698
MalI	GATC	4 cut(s)	117, 2034, 2446, 3450
MboI	GATC	4 cut(s)	115, 2032, 2444, 3448
MfeI	CAATTG	1 cut(s)	2429
MflI	RGATCY	1 cut(s)	115
MhlI	GDGCHC	3 cut(s)	255, 393, 4813
MlsI	TGGCCA	2 cut(s)	294, 1830
MluNI	TGGCCA	2 cut(s)	294, 1830
MmeI	TCCRAC	4 cut(s)	788, 2601, 4863, 4966
Mox20I	TGGCCA	2 cut(s)	294, 1830
Mph1103I	ATGCAT	1 cut(s)	4682
MroI	TCCGGA	1 cut(s)	2296
MroXI	GAANNNNTTC	6 cut(s)	126, 3763, 3907, 4051, 4195, 4339
MscI	TGGCCA	2 cut(s)	294, 1830
MslI	CAYNNNNRTG	5 cut(s)	180, 1970, 2106, 3312, 4963
Msp20I	TGGCCA	2 cut(s)	294, 1830
MspA1I	CMGCKG	4 cut(s)	2778, 3025, 4904, 4996
MspCI	CTTAAG	2 cut(s)	344, 1295
MspI	CCGG	7 cut(s)	14, 41, 481, 493, 512, 2297, 3237
MspR9I	CCNGG	8 cut(s)	42, 494, 513, 519, 1281, 1955, 2967, 3367
MunI	CAATTG	1 cut(s)	2429
Mva1269I	GAATGC	9 cut(s)	509, 1513, 2367, 3223, 3663, 3807, 3951, 4095, 4239
MvaI	CCWGG	5 cut(s)	519, 1281, 1955, 2967, 3367
MvnI	CGCG	1 cut(s)	4860
NciI	CCSGG	3 cut(s)	42, 494, 513
NdeI	CATATG	1 cut(s)	3248
NdeII	GATC	4 cut(s)	115, 2032, 2444, 3448
NheI	GCTAGC	1 cut(s)	194
NmuCI	GTSAC	6 cut(s)	59, 1563, 1754, 2470, 3097, 3681
NruI	TCGCGA	1 cut(s)	4860
NsbI	TGCGCA	1 cut(s)	4969
NsiI	ATGCAT	1 cut(s)	4682
NspI	RCATGY	2 cut(s)	1429, 3430
PaeI	GCATGC	1 cut(s)	3430
PceI	AGGCCT	2 cut(s)	1556, 3365
PciSI	GCTCTTC	3 cut(s)	132, 887, 1995
PctI	GAATGC	9 cut(s)	509, 1513, 2367, 3223, 3663, 3807, 3951, 4095, 4239
PdmI	GAANNNNTTC	6 cut(s)	126, 3763, 3907, 4051, 4195, 4339
PflFI	GACNNNGTC	1 cut(s)	2767
PinAI	ACCGGT	1 cut(s)	480
PmaCI	CACGTG	1 cut(s)	4622
PmlI	CACGTG	1 cut(s)	4622
Ppu21I	YACGTR	1 cut(s)	4622
PpuMI	RGGWCCY	3 cut(s)	139, 515, 1914
PshBI	ATTAAT	1 cut(s)	2823
Psp124BI	GAGCTC	2 cut(s)	255, 4813
Psp1406I	AACGTT	1 cut(s)	4698
Psp5II	RGGWCCY	3 cut(s)	139, 515, 1914
Psp6I	CCWGG	5 cut(s)	517, 1279, 1953, 2965, 3365
PspCI	CACGTG	1 cut(s)	4622
PspGI	CCWGG	5 cut(s)	517, 1279, 1953, 2965, 3365
PspPPI	RGGWCCY	3 cut(s)	139, 515, 1914
PstI	CTGCAG	1 cut(s)	1411
PstNI	CAGNNNCTG	1 cut(s)	4316
PsuI	RGATCY	1 cut(s)	115
PsyI	GACNNNGTC	1 cut(s)	2767
PvuII	CAGCTG	3 cut(s)	3025, 4904, 4996
RruI	TCGCGA	1 cut(s)	4860
RsaI	GTAC	5 cut(s)	1058, 1349, 1794, 2211, 4593
RsaNI	GTAC	5 cut(s)	1057, 1348, 1793, 2210, 4592
RseI	CAYNNNNRTG	5 cut(s)	180, 1970, 2106, 3312, 4963
Rsr2I	CGGWCCG	1 cut(s)	509
RsrII	CGGWCCG	1 cut(s)	509
SacI	GAGCTC	2 cut(s)	255, 4813
SalI	GTCGAC	1 cut(s)	3574
SapI	GCTCTTC	3 cut(s)	132, 887, 1995
Sau3AI	GATC	4 cut(s)	115, 2032, 2444, 3448
ScrFI	CCNGG	8 cut(s)	42, 494, 513, 519, 1281, 1955, 2967, 3367
SduI	GDGCHC	3 cut(s)	255, 393, 4813
SexAI	ACCWGGT	1 cut(s)	1279
SfaNI	GCATC	9 cut(s)	172, 1357, 1499, 1708, 2068, 2587, 2824, 2952, 4967
SfcI	CTRYAG	3 cut(s)	223, 1407, 3177
SinI	GGWCC	9 cut(s)	139, 426, 478, 509, 515, 1737, 1914, 3243, 4357
SmiMI	CAYNNNNRTG	5 cut(s)	180, 1970, 2106, 3312, 4963
SmlI	CTYRAG	6 cut(s)	279, 344, 1295, 1876, 2240, 2799
SmoI	CTYRAG	6 cut(s)	279, 344, 1295, 1876, 2240, 2799
SpeI	ACTAGT	1 cut(s)	3155
SphI	GCATGC	1 cut(s)	3430
SseBI	AGGCCT	2 cut(s)	1556, 3365
SspI	AATATT	1 cut(s)	1858
SstI	GAGCTC	2 cut(s)	255, 4813
StuI	AGGCCT	2 cut(s)	1556, 3365
StyD4I	CCNGG	8 cut(s)	40, 492, 511, 517, 1279, 1953, 2965, 3365
StyI	CCWWGG	1 cut(s)	4870
TaiI	ACGT	3 cut(s)	3581, 4624, 4701
TaqI	TCGA	8 cut(s)	439, 890, 980, 1107, 1391, 2465, 2583, 3575
TaqII	GACCGA	1 cut(s)	3116
TatI	WGTACW	4 cut(s)	1347, 1792, 2209, 4591
TauI	GCSGC	3 cut(s)	51, 1930, 1933
TscAI	CASTG	8 cut(s)	1036, 1201, 1345, 2415, 2560, 4330, 4545, 4801
TseFI	GTSAC	6 cut(s)	59, 1563, 1754, 2470, 3097, 3681
TseI	GCWGC	7 cut(s)	2081, 2186, 2413, 4559, 4904, 4981, 5092
Tsp45I	GTSAC	6 cut(s)	59, 1563, 1754, 2470, 3097, 3681
TspGWI	ACGGA	2 cut(s)	937, 5089
TspRI	CASTG	8 cut(s)	1036, 1201, 1345, 2415, 2560, 4330, 4545, 4801
Tth111I	GACNNNGTC	1 cut(s)	2767
Vha464I	CTTAAG	2 cut(s)	344, 1295
VpaK11BI	GGWCC	9 cut(s)	139, 426, 478, 509, 515, 1737, 1914, 3243, 4357
VspI	ATTAAT	1 cut(s)	2823
XagI	CCTNNNNNAGG	1 cut(s)	1271
XbaI	TCTAGA	2 cut(s)	452, 1127
XceI	RCATGY	2 cut(s)	1429, 3430
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1259, 2711
XmiI	GTMKAC	2 cut(s)	3575, 4727
XmnI	GAANNNNTTC	6 cut(s)	126, 3763, 3907, 4051, 4195, 4339
ZraI	GACGTC	1 cut(s)	3579
Zsp2I	ATGCAT	1 cut(s)	4682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.