Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007353

Physical Location & Seq

Genomic Coordinates Reverse (-)

31568319 .. 31574830

Gene Structure 6512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G333600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGCCATCGACTCTCTCGTCCTCGGCGCTGGGCAAGAGGTAGGTAAGAGCTGTGTAGTGGTGACAATCAATGGGAAGCGAATCATGTTCGACTGCGGAATGCATATGGGGCATCTAGACCACCAACGCTACCCCGACTTCTCTCTCATTCCTAAACCCGAACCCGACCCGAACTTCGATCACGCCCTCACTTGCATCATCATCACCCACTTTCACTTGGATCACGTTGGAGCCCTCCCTTATTTCACTGAAGTCTGCGGATATCGTGGCCCCATTTACATGACGTATCCGACAAAGGCATTGGCTCCTATAATGTTGGAGGACTATCGAAAAGTGATGGTTGAGCGAAGGGGTGAGGAAGAACAGTTTTCTTCTGATCACATTGCCGAATGCATGAAGAAAGTTATACCGGTGGATCTGAAGCAAACAGTGCAGGTTGATAAAGACCTTCAAATCCGTGCGTACTATGCAGGACATGTTCTTGGAGCTGCAATGTTTTATGCAAAGGTGGGAGACGCTGCTATGGTATACACAGGAGACTATAATATGACACCAGATAGGCATCTTGGAGCAGCTCAAATTGAACGACTAAATTTGGACCTTCTTATTTCAGAGTCCACATATGGAACAACCATCCGGGATTCAAAATATGCCCGGGAAAGAGAATTTCTCAGAGCTGTTCACAAATGCGTCGCTGGTGGTGGAAAAGTGCTAATTCCAACATTTGCTCTTGGGAGAGCTCAGGAGCTCTGTATCTTGCTGGAAGATTATTGGGAGCGCATGAATCTAAAGGTTCCTATTTACTTCTCAGCAGGTCTGACCCTTCAAGCCAATATGTACTATAAGATGCTTATCAGTTGGACCAGCCAGAAAGTTAAAGAAACGTACTCCACACGCAATGCATTTGATTTTAAAAATGCTCACAAGTTTGACCGTTCTATGATCAATGCTCCTGGACCTTGTGTTCTGTTTGCCACACCAGGGATGATCAGTGGTGGTTTTTCACTTGAAGTTTTCAAGCACTGGGCTCCTTCGGAAATGAATCTTGTTACACTGCCCGGGTATTGCGTGGCTGGAACTATAGGACATAAATTGATGTCGGGTAAACCCACCAAAATTGATCTGGACAAGGACACGCAAATTGATGTGCGATGCCAGATTCATCATCTGTCTTTCAGTCCTCATACAGATGCCAAAGGGATTATGGACCTTATCAAATTTCTTTCCCCAAAGAACGTGATACTTGTTCATGGCGAGAAGCCTAAAATGGCTACTCTAAAAGGAAAAATACAGTCCGAACTGGGAATTCAATGTCATGACCCTGCAAACAATGAGACTGTCTCAATTTCTTCAACCCACTATGTGAAGGCATTAGCTTCGGACGCATTTATCCGAAGCTGCTCAAATCCAAACTTCAAGTTTTCGAAAAGCAGCCAAGAAGATGAACACGGTTCAAATTCGAGAAACAATAATTTCACTCCGCGACTGCGAGTAAGTGATGAAAGGGTAGCAGAAGGGGTCTTGGTTATGGAGAGAAACAAAAAAGCGAAGGTAGTACACCAAGACGAGCTTCTGCTCATGTTAGGAGAAAAGAAGCACCAAGTTCAATTTGCTTATTGCTGCCCCGCTGATATTGGCCACTTGGGAGAGACCAAAAGTTCAACAACAAATGATGGTCAGCTTTGCAAATCTGAGACATGCTCTCGGCTTCTTCGCCAATTGTCTGCAAAACTGTCAAATGAATTTTCTCAAGGGAACATCCAAGATTTTGAGGATCATCTTCAAGTGGAGTCGTTTCATGTGTCCATTTGTTTGAAGAACAACTGCCCTTACAGATTAATGGATGTTCAAAACAAATCCCAAGAAGCAGCGTTTTTCTGCTGCAGTTGGGGGACGGCAGATGAGAAGCTTGCATGGAAAATCATTTCCATCTGTCAAAATTTTAACGTACATCAGCATAAACAAGGGTGTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0030154 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Beta-Casp Lactamase_B_6 RMMBL zf-RING_2

Protein Analysis

659

Amino Acids

73.98

Weight (kDa)

7.55

Isoelectric Point (pI)

33.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01730 AT2G01730
fragaria_vesca	FvH4_4g33520
malus_domestica	MD16G1018300.v1.1
prunus_persica	Prupe.1G333600_v2.0.a1
pyrus_communis	pycom16g01670
rosa_chinensis	RchiOBHm_Chr3g0480131 RchiOBHm_Chr4g0443031
rosa_laevigata	RLG00000005961
rosa_multiflora	Rmu_co8263599.1_g000001 Rmu_sc0006604.1_g000001 Rmu_sc0006604.1_g000004 Rmu_sc0008055.1_g000002 Rmu_sc0011261.1_g000006
rosa_roxburghii	Rroxscaffold_5G00383660
rosa_rugosa	Rorug04G0343900
rosa_samantha	Rh3AG232100 Rh3CG261900 Rh3DG257700 Rh4AG398100 Rh4BG409600 Rh4CG425100 Rh4DG404400
rosa_wichuraiana	Rw3G020840 Rw4G034290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	17
Acc36I	ACCTGC	2 cut(s)	424, 803
AccI	GTMKAC	1 cut(s)	528
AccII	CGCG	1 cut(s)	1483
AciI	CCGC	4 cut(s)	96, 258, 1481, 1626
AclWI	GGATC	3 cut(s)	228, 423, 1782
AcoI	YGGCCR	2 cut(s)	3, 1636
AcsI	RAATTY	7 cut(s)	592, 665, 1217, 1305, 1456, 1742, 1939
AcuI	CTGAAG	2 cut(s)	270, 440
AdeI	CACNNNGTG	1 cut(s)	1363
AfaI	GTAC	5 cut(s)	464, 839, 887, 1557, 1950
AfiI	CCNNNNNNNGG	1 cut(s)	981
AflIII	ACRYGT	1 cut(s)	475
AgeI	ACCGGT	1 cut(s)	409
AjnI	CCWGG	2 cut(s)	952, 979
AjuI	GAANNNNNNNTTGG	2 cut(s)	1554, 1586
AloI	GAACNNNNNNTCC	2 cut(s)	948, 980
Alw21I	GWGCWC	2 cut(s)	742, 750
Alw26I	GTCTC	6 cut(s)	507, 531, 1328, 1345, 1643, 1688
AlwI	GGATC	3 cut(s)	228, 423, 1782
Ama87I	CYCGRG	2 cut(s)	654, 1058
AoxI	GGCC	3 cut(s)	3, 268, 1636
ApeKI	GCWGC	8 cut(s)	488, 518, 572, 1398, 1431, 1620, 1868, 1881
ApoI	RAATTY	7 cut(s)	592, 665, 1217, 1305, 1456, 1742, 1939
ArsI	GACNNNNNNTTYG	2 cut(s)	158, 190
AseI	ATTAAT	1 cut(s)	1838
AsiGI	ACCGGT	1 cut(s)	409
AspLEI	GCGC	2 cut(s)	29, 780
AspS9I	GGNCC	5 cut(s)	269, 598, 861, 956, 1207
AsuC2I	CCSGG	5 cut(s)	638, 655, 656, 1059, 1060
AsuHPI	GGTGA	3 cut(s)	73, 196, 365
AsuII	TTCGAA	1 cut(s)	1424
AvaI	CYCGRG	2 cut(s)	654, 1058
AvaII	GGWCC	4 cut(s)	598, 861, 956, 1207
BalI	TGGCCA	2 cut(s)	5, 1638
BanII	GRGCYC	4 cut(s)	235, 742, 750, 1030
Bbv12I	GWGCWC	2 cut(s)	742, 750
BbvI	GCAGC	8 cut(s)	475, 505, 584, 1385, 1443, 1607, 1868, 1880
BccI	CCATC	5 cut(s)	14, 331, 641, 1667, 1937
BceAI	ACGGC	1 cut(s)	1911
BcgI	CGANNNNNNTGC	2 cut(s)	1359, 1393
BciT130I	CCWGG	2 cut(s)	954, 981
BciVI	GTATCC	1 cut(s)	297
BclI	TGATCA	3 cut(s)	376, 942, 987
BcnI	CCSGG	5 cut(s)	638, 655, 656, 1059, 1060
BcoDI	GTCTC	6 cut(s)	507, 531, 1328, 1345, 1643, 1688
BfaI	CTAG	1 cut(s)	116
BfmI	CTRYAG	3 cut(s)	1080, 1882, 1973
BfoI	RGCGCY	1 cut(s)	30
BfuAI	ACCTGC	2 cut(s)	424, 803
BfuI	GTATCC	1 cut(s)	297
BisI	GCNGC	8 cut(s)	489, 519, 573, 1399, 1432, 1621, 1869, 1882
BlsI	GCNGC	8 cut(s)	490, 520, 574, 1400, 1433, 1622, 1870, 1883
Bme1390I	CCNGG	7 cut(s)	638, 655, 656, 954, 981, 1059, 1060
Bme18I	GGWCC	4 cut(s)	598, 861, 956, 1207
BmeT110I	CYCGRG	2 cut(s)	654, 1058
BmgT120I	GGNCC	5 cut(s)	269, 598, 861, 956, 1207
BmiI	GGNNCC	5 cut(s)	232, 271, 306, 795, 1029
BmrFI	CCNGG	7 cut(s)	638, 655, 656, 954, 981, 1059, 1060
BmrI	ACTGGG	2 cut(s)	1033, 1310
BmsI	GCATC	6 cut(s)	121, 204, 571, 837, 1142, 1180
BmuI	ACTGGG	2 cut(s)	1033, 1310
BplI	GAGNNNNNCTC	6 cut(s)	654, 686, 1325, 1357, 1685, 1717
Bpu10I	CCTNAGC	1 cut(s)	741
Bpu14I	TTCGAA	1 cut(s)	1424
BpuEI	CTTGAG	1 cut(s)	1734
BpuMI	CCSGG	5 cut(s)	638, 655, 656, 1059, 1060
BsaBI	GATNNNNATC	2 cut(s)	561, 851
BsaI	GGTCTC	1 cut(s)	1643
BsaJI	CCNNGG	4 cut(s)	22, 654, 980, 1058
BsaWI	WCCGGW	1 cut(s)	409
Bsc4I	CCNNNNNNNGG	1 cut(s)	981
Bse118I	RCCGGY	1 cut(s)	409
Bse1I	ACTGG	2 cut(s)	1028, 1305
Bse3DI	GCAATG	3 cut(s)	381, 498, 904
Bse8I	GATNNNNATC	2 cut(s)	561, 851
BseBI	CCWGG	2 cut(s)	954, 981
BseDI	CCNNGG	4 cut(s)	22, 654, 980, 1058
BseGI	GGATG	4 cut(s)	633, 990, 1758, 1849
BseJI	GATNNNNATC	2 cut(s)	561, 851
BseLI	CCNNNNNNNGG	1 cut(s)	981
BseMI	GCAATG	3 cut(s)	381, 498, 904
BseMII	CTCAG	4 cut(s)	685, 755, 822, 1683
BseNI	ACTGG	2 cut(s)	1028, 1305
BseXI	GCAGC	8 cut(s)	475, 505, 584, 1385, 1443, 1607, 1868, 1880
BseYI	CCCAGC	1 cut(s)	29
BsgI	GTGCAG	1 cut(s)	452
Bsh1236I	CGCG	1 cut(s)	1483
BshFI	GGCC	3 cut(s)	5, 270, 1638
BshTI	ACCGGT	1 cut(s)	409
BsiHKAI	GWGCWC	2 cut(s)	742, 750
BsiHKCI	CYCGRG	2 cut(s)	654, 1058
BsiSI	CCGG	4 cut(s)	410, 637, 655, 1059
BslFI	GGGAC	1 cut(s)	1906
BslI	CCNNNNNNNGG	1 cut(s)	981
BsmAI	GTCTC	6 cut(s)	507, 531, 1328, 1345, 1643, 1688
BsmBI	CGTCTC	1 cut(s)	507
BsmFI	GGGAC	1 cut(s)	1906
BsmI	GAATGC	2 cut(s)	105, 395
BsnI	GGCC	3 cut(s)	5, 270, 1638
Bso31I	GGTCTC	1 cut(s)	1643
BsoBI	CYCGRG	2 cut(s)	654, 1058
Bsp119I	TTCGAA	1 cut(s)	1424
Bsp1286I	GDGCHC	4 cut(s)	235, 742, 750, 1030
Bsp143I	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
BspACI	CCGC	4 cut(s)	96, 258, 1481, 1626
BspANI	GGCC	3 cut(s)	5, 270, 1638
BspCNI	CTCAG	4 cut(s)	684, 754, 821, 1684
BspFNI	CGCG	1 cut(s)	1483
BspHI	TCATGA	1 cut(s)	1315
BspLI	GGNNCC	5 cut(s)	232, 271, 306, 795, 1029
BspMAI	CTGCAG	1 cut(s)	1886
BspMI	ACCTGC	2 cut(s)	424, 803
BspPI	GGATC	3 cut(s)	228, 423, 1782
BspT104I	TTCGAA	1 cut(s)	1424
BspTNI	GGTCTC	1 cut(s)	1643
BsrDI	GCAATG	3 cut(s)	381, 498, 904
BsrFI	RCCGGY	1 cut(s)	409
BsrI	ACTGG	2 cut(s)	1028, 1305
BssAI	RCCGGY	1 cut(s)	409
BssECI	CCNNGG	4 cut(s)	22, 654, 980, 1058
BssMI	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
BssNAI	GTATAC	1 cut(s)	529
Bst1107I	GTATAC	1 cut(s)	529
Bst2UI	CCWGG	2 cut(s)	954, 981
Bst4CI	ACNGT	7 cut(s)	366, 430, 935, 1293, 1339, 1451, 1734
BstAPI	GCANNNNNTGC	1 cut(s)	430
BstBI	TTCGAA	1 cut(s)	1424
BstC8I	GCNNGC	1 cut(s)	1911
BstDEI	CTNAG	4 cut(s)	671, 741, 808, 1692
BstF5I	GGATG	4 cut(s)	633, 990, 1758, 1849
BstFNI	CGCG	1 cut(s)	1483
BstH2I	RGCGCY	1 cut(s)	30
BstHHI	GCGC	2 cut(s)	29, 780
BstKTI	GATC	8 cut(s)	181, 223, 379, 418, 945, 990, 1123, 1777
BstMAI	GTCTC	6 cut(s)	507, 531, 1328, 1345, 1643, 1688
BstMBI	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
BstMWI	GCNNNNNNNGC	4 cut(s)	109, 430, 467, 1382
BstNI	CCWGG	2 cut(s)	954, 981
BstNSI	RCATGY	2 cut(s)	479, 1701
BstSCI	CCNGG	7 cut(s)	636, 653, 654, 952, 979, 1057, 1058
BstSFI	CTRYAG	3 cut(s)	1080, 1882, 1973
BstUI	CGCG	1 cut(s)	1483
BstV1I	GCAGC	8 cut(s)	475, 505, 584, 1385, 1443, 1607, 1868, 1880
BstX2I	RGATCY	1 cut(s)	415
BstYI	RGATCY	1 cut(s)	415
BstZ17I	GTATAC	1 cut(s)	529
BsuI	GTATCC	1 cut(s)	297
BsuRI	GGCC	3 cut(s)	5, 270, 1638
BtgZI	GCGATG	1 cut(s)	1165
BtsCI	GGATG	4 cut(s)	633, 990, 1758, 1849
BtsI	GCAGTG	1 cut(s)	1052
BtsIMutI	CAGTG	5 cut(s)	246, 435, 997, 1021, 1052
BveI	ACCTGC	2 cut(s)	424, 803
Cac8I	GCNNGC	1 cut(s)	1911
CciI	TCATGA	1 cut(s)	1315
CfoI	GCGC	2 cut(s)	29, 780
Cfr10I	RCCGGY	1 cut(s)	409
Cfr13I	GGNCC	5 cut(s)	269, 598, 861, 956, 1207
Cfr9I	CCCGGG	2 cut(s)	654, 1058
CseI	GACGC	3 cut(s)	524, 679, 1391
Csp6I	GTAC	5 cut(s)	463, 838, 886, 1556, 1949
CspAI	ACCGGT	1 cut(s)	409
CspCI	CAANNNNNGTGG	2 cut(s)	1099, 1134
CviQI	GTAC	5 cut(s)	463, 838, 886, 1556, 1949
DdeI	CTNAG	4 cut(s)	671, 741, 808, 1692
DpnI	GATC	8 cut(s)	180, 222, 378, 417, 944, 989, 1122, 1776
DpnII	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
DraI	TTTAAA	1 cut(s)	913
DraIII	CACNNNGTG	1 cut(s)	1363
DrdI	GACNNNNNNGTC	1 cut(s)	17
DseDI	GACNNNNNNGTC	1 cut(s)	17
EaeI	YGGCCR	2 cut(s)	3, 1636
Ecl136II	GAGCTC	2 cut(s)	740, 748
Eco24I	GRGCYC	4 cut(s)	235, 742, 750, 1030
Eco31I	GGTCTC	1 cut(s)	1643
Eco32I	GATATC	1 cut(s)	263
Eco47I	GGWCC	4 cut(s)	598, 861, 956, 1207
Eco53kI	GAGCTC	2 cut(s)	740, 748
Eco57I	CTGAAG	2 cut(s)	270, 440
Eco88I	CYCGRG	2 cut(s)	654, 1058
EcoICRI	GAGCTC	2 cut(s)	740, 748
EcoRI	GAATTC	1 cut(s)	1305
EcoRII	CCWGG	2 cut(s)	952, 979
EcoRV	GATATC	1 cut(s)	263
EcoT22I	ATGCAT	3 cut(s)	105, 395, 904
EcoT38I	GRGCYC	4 cut(s)	235, 742, 750, 1030
Esp3I	CGTCTC	1 cut(s)	507
FalI	AAGNNNNNCTT	2 cut(s)	1554, 1586
FaqI	GGGAC	1 cut(s)	1906
FauI	CCCGC	1 cut(s)	1633
FauNDI	CATATG	2 cut(s)	105, 622
FbaI	TGATCA	3 cut(s)	376, 942, 987
FblI	GTMKAC	1 cut(s)	528
Fnu4HI	GCNGC	8 cut(s)	489, 519, 573, 1399, 1432, 1621, 1869, 1882
FokI	GGATG	4 cut(s)	620, 997, 1745, 1856
FriOI	GRGCYC	4 cut(s)	235, 742, 750, 1030
Fsp4HI	GCNGC	8 cut(s)	489, 519, 573, 1399, 1432, 1621, 1869, 1882
FspBI	CTAG	1 cut(s)	116
GlaI	GCGC	2 cut(s)	28, 779
GluI	GCNGC	8 cut(s)	489, 519, 573, 1399, 1432, 1621, 1869, 1882
GsaI	CCCAGC	1 cut(s)	33
HaeII	RGCGCY	1 cut(s)	30
HaeIII	GGCC	3 cut(s)	5, 270, 1638
HapII	CCGG	4 cut(s)	410, 637, 655, 1059
HgaI	GACGC	3 cut(s)	524, 679, 1391
HhaI	GCGC	2 cut(s)	29, 780
Hin6I	GCGC	2 cut(s)	27, 778
HinP1I	GCGC	2 cut(s)	27, 778
HindIII	AAGCTT	1 cut(s)	1907
HinfI	GANTC	8 cut(s)	11, 81, 614, 641, 784, 1042, 1159, 1790
HpaII	CCGG	4 cut(s)	410, 637, 655, 1059
HphI	GGTGA	3 cut(s)	73, 196, 365
Hpy166II	GTNNAC	5 cut(s)	529, 618, 682, 1106, 1558
Hpy188III	TCNNGA	5 cut(s)	116, 743, 1124, 1316, 1461
Hpy8I	GTNNAC	5 cut(s)	529, 618, 682, 1106, 1558
Hpy99I	CGWCG	1 cut(s)	695
HpyAV	CCTTC	8 cut(s)	342, 458, 611, 833, 1041, 1360, 1508, 1543
HpyCH4III	ACNGT	7 cut(s)	366, 430, 935, 1293, 1339, 1451, 1734
HpyCH4IV	ACGT	5 cut(s)	225, 284, 884, 1236, 1947
HpyF10VI	GCNNNNNNNGC	4 cut(s)	109, 430, 467, 1382
HpyF3I	CTNAG	4 cut(s)	671, 741, 808, 1692
HpySE526I	ACGT	5 cut(s)	225, 284, 884, 1236, 1947
HspAI	GCGC	2 cut(s)	27, 778
Ksp22I	TGATCA	3 cut(s)	376, 942, 987
Kzo9I	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
LmnI	GCTCC	8 cut(s)	230, 310, 485, 569, 745, 775, 955, 1033
Lsp1109I	GCAGC	8 cut(s)	475, 505, 584, 1385, 1443, 1607, 1868, 1880
LweI	GCATC	6 cut(s)	121, 204, 571, 837, 1142, 1180
MaeI	CTAG	1 cut(s)	116
MaeII	ACGT	5 cut(s)	225, 284, 884, 1236, 1947
MaeIII	GTNAC	2 cut(s)	61, 1048
MalI	GATC	8 cut(s)	180, 222, 378, 417, 944, 989, 1122, 1776
MboI	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
MboII	GAAGA	9 cut(s)	363, 371, 409, 776, 1341, 1451, 1703, 1772, 1828
MfeI	CAATTG	1 cut(s)	1718
MflI	RGATCY	1 cut(s)	415
MhlI	GDGCHC	4 cut(s)	235, 742, 750, 1030
MlsI	TGGCCA	2 cut(s)	5, 1638
MluNI	TGGCCA	2 cut(s)	5, 1638
MlyI	GAGTC	3 cut(s)	5, 623, 1799
MmeI	TCCRAC	5 cut(s)	208, 297, 314, 743, 839
MnlI	CCTC	8 cut(s)	31, 32, 197, 245, 313, 349, 1191, 1765
Mox20I	TGGCCA	2 cut(s)	5, 1638
Mph1103I	ATGCAT	3 cut(s)	105, 395, 904
MscI	TGGCCA	2 cut(s)	5, 1638
MseI	TTAA	4 cut(s)	876, 912, 1838, 1944
MslI	CAYNNNNRTG	2 cut(s)	278, 1188
Msp20I	TGGCCA	2 cut(s)	5, 1638
MspA1I	CMGCKG	1 cut(s)	1628
MspI	CCGG	4 cut(s)	410, 637, 655, 1059
MspR9I	CCNGG	7 cut(s)	638, 655, 656, 954, 981, 1059, 1060
MunI	CAATTG	1 cut(s)	1718
Mva1269I	GAATGC	2 cut(s)	105, 395
MvaI	CCWGG	2 cut(s)	954, 981
MvnI	CGCG	1 cut(s)	1483
MwoI	GCNNNNNNNGC	4 cut(s)	109, 430, 467, 1382
NciI	CCSGG	5 cut(s)	638, 655, 656, 1059, 1060
NdeI	CATATG	2 cut(s)	105, 622
NdeII	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
NlaIV	GGNNCC	5 cut(s)	232, 271, 306, 795, 1029
NmeAIII	GCCGAG	1 cut(s)	1684
NmuCI	GTSAC	1 cut(s)	61
NsiI	ATGCAT	3 cut(s)	105, 395, 904
NspI	RCATGY	2 cut(s)	479, 1701
NspV	TTCGAA	1 cut(s)	1424
PagI	TCATGA	1 cut(s)	1315
PciI	ACATGT	1 cut(s)	475
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PctI	GAATGC	2 cut(s)	105, 395
PfeI	GAWTC	5 cut(s)	81, 641, 784, 1042, 1159
PfoI	TCCNGGA	2 cut(s)	636, 952
PinAI	ACCGGT	1 cut(s)	409
PkrI	GCNGC	8 cut(s)	490, 520, 574, 1400, 1433, 1622, 1870, 1883
PleI	GAGTC	3 cut(s)	5, 622, 1798
PpsI	GAGTC	3 cut(s)	5, 622, 1798
PscI	ACATGT	1 cut(s)	475
PshBI	ATTAAT	1 cut(s)	1838
Psp124BI	GAGCTC	2 cut(s)	742, 750
Psp6I	CCWGG	2 cut(s)	952, 979
PspFI	CCCAGC	1 cut(s)	29
PspGI	CCWGG	2 cut(s)	952, 979
PspN4I	GGNNCC	5 cut(s)	232, 271, 306, 795, 1029
PspPI	GGNCC	5 cut(s)	269, 598, 861, 956, 1207
PstI	CTGCAG	1 cut(s)	1886
PsuI	RGATCY	1 cut(s)	415
RsaI	GTAC	5 cut(s)	464, 839, 887, 1557, 1950
RsaNI	GTAC	5 cut(s)	463, 838, 886, 1556, 1949
RseI	CAYNNNNRTG	2 cut(s)	278, 1188
SacI	GAGCTC	2 cut(s)	742, 750
SaqAI	TTAA	4 cut(s)	876, 912, 1838, 1944
SatI	GCNGC	8 cut(s)	489, 519, 573, 1399, 1432, 1621, 1869, 1882
Sau3AI	GATC	8 cut(s)	178, 220, 376, 415, 942, 987, 1120, 1774
Sau96I	GGNCC	5 cut(s)	269, 598, 861, 956, 1207
SchI	GAGTC	3 cut(s)	5, 623, 1799
ScrFI	CCNGG	7 cut(s)	638, 655, 656, 954, 981, 1059, 1060
SduI	GDGCHC	4 cut(s)	235, 742, 750, 1030
SfaNI	GCATC	6 cut(s)	121, 204, 571, 837, 1142, 1180
SfcI	CTRYAG	3 cut(s)	1080, 1882, 1973
SfuI	TTCGAA	1 cut(s)	1424
SinI	GGWCC	4 cut(s)	598, 861, 956, 1207
SmaI	CCCGGG	2 cut(s)	656, 1060
SmiMI	CAYNNNNRTG	2 cut(s)	278, 1188
SmlI	CTYRAG	1 cut(s)	1749
SmoI	CTYRAG	1 cut(s)	1749
SsiI	CCGC	4 cut(s)	96, 258, 1481, 1626
SspMI	CTAG	1 cut(s)	116
SstI	GAGCTC	2 cut(s)	742, 750
StyD4I	CCNGG	7 cut(s)	636, 653, 654, 952, 979, 1057, 1058
TaaI	ACNGT	7 cut(s)	366, 430, 935, 1293, 1339, 1451, 1734
TaiI	ACGT	5 cut(s)	228, 287, 887, 1239, 1950
TaqI	TCGA	6 cut(s)	9, 90, 177, 328, 1424, 1460
TatI	WGTACW	2 cut(s)	837, 1555
TfiI	GAWTC	5 cut(s)	81, 641, 784, 1042, 1159
Tru1I	TTAA	4 cut(s)	876, 912, 1838, 1944
Tru9I	TTAA	4 cut(s)	876, 912, 1838, 1944
TscAI	CASTG	5 cut(s)	253, 435, 997, 1028, 1059
TseFI	GTSAC	1 cut(s)	61
TseI	GCWGC	8 cut(s)	488, 518, 572, 1398, 1431, 1620, 1868, 1881
Tsp45I	GTSAC	1 cut(s)	61
TspDTI	ATGAA	9 cut(s)	410, 797, 1055, 1151, 1238, 1458, 1515, 1755, 1787
TspGWI	ACGGA	1 cut(s)	446
TspMI	CCCGGG	2 cut(s)	654, 1058
TspRI	CASTG	5 cut(s)	253, 435, 997, 1028, 1059
VpaK11BI	GGWCC	4 cut(s)	598, 861, 956, 1207
VspI	ATTAAT	1 cut(s)	1838
XapI	RAATTY	7 cut(s)	592, 665, 1217, 1305, 1456, 1742, 1939
XbaI	TCTAGA	1 cut(s)	115
XceI	RCATGY	2 cut(s)	479, 1701
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1120, 1201
XmaI	CCCGGG	2 cut(s)	654, 1058
XmiI	GTMKAC	1 cut(s)	528
XspI	CTAG	1 cut(s)	116
Zsp2I	ATGCAT	3 cut(s)	105, 395, 904

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.