Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0007353

Physical Location & Seq

Genomic Coordinates Forward (+)

1028538 .. 1032629

Gene Structure 4092 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g01670.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGTTACACTCACCACGAAACGAATCAAACGCCGGCCCAGAACTGAAAAGCGCGCCAAGAAGCCGCGCATATCAATTCTCATGGCCATCGACTCTCTCGTCCTCGGCGCCGGGCAAGAGGTCGGTAAGAGCTGCGTGGTGGTGACAATCAATGGGAAGCGAATCATGTTCGACTGCGGAATGCACATGGGCTATCTCGACCACCGCCGCTACCCCGATTTCTCTCGCATTCCCAAATCGCAGAACGAGTCGAACTTCGATCACTCCCTTACTTGCATCATCATCACCCACTTTCACTTAGATCACGTTGGGGCTCTTCCTTACTTCACCGAAGTCTGCGGTTATCAGGGTCCAATTTACATGACGTATCCGACAAAGGCATTGTCTCCTATAATGTTGGAGGACTATCGAAAAGTGATGGTGGAGCGAAGGGGCGAGGAAGAGCAGTTTTCGTCTTATCACATTGCCGAGTGCATGAAGAAAGTAGTACCAGTGGATCTGAAGCAGACAGTGCAGGTTGATAAAGACCTTCAAATCCGTGCATACTATGCAGGACATGTTCTTGGAGCCGCAATGTTTTACGCAAAGGTGGGAGACGCCACTATGGTGTACACGGGAGACTATAATATGACACCAGATAGGCATCTTGGAGCAGCTCAAATTGACCGACTAAATTTGGACCTTCTTATTTCAGAATCCACGTATGCAACAACCATACGCGATTCAAAATATGCCCGGGAAAGAGAATTTCTCAGAGCTGTTCATAAATGTGTTGCTGCCGGTGGAAAAGTTCTAATTCCAACTTTTGCTCTTGGAAGAGCTCAGGAACTGTGTATCTTGTTGGAAGATTACTGGGAGCGCATGAATCTAAAGGTTCCTATTTACTTCTCAGCAGGTTTGACCCTTCAAGCCAATATGTATTATAGGATGCTTATCAGTTGGACCAGTCAGAAAGTCAAAGAAACGTACTCCACGCATAATGCCTTTGATTTTAAGAACGCTCACAAGTTTGATCGTTCGATGATGCATGCTCCTGGACCCTGTGTTCTGTTTGCCACACCAGGGATGATCAGTGGTGGCTTTTCACTTGAGGTTTTCAAGCACTGGGCTCCTTCGGCGATGAATCTTGTTACACTTCCCGGGTATTGTGTGGCTGGAACCATAGGGCATAAATTGATGTCGGGAAAACCCACCAAAATTGATCTGGACAAGGACACACAAATTGATGTTCGATGCCAGATTCATCAGTTGTCTTTCAGTCCTCACACAGACGCCAAAGGAATTATGGATCTTGTAAAATTTCTCTCCCCGAAGCACGTCATACTTGTTCATGGCGAGAAGCCGAGGATGGCGATTCTAAAAGGAAAAATCCAGTCGGAGCTGGGAATTCAGTGTTACGACCCTGCAAACAATGAGACCGTGTCAGTTCCATCAACCCACTACGCGAAAGCAGTAGCTTCCAACGTGTTCATCCGAAGCTGTTCGAATCCAAACTTCAAGTTCTCGAAAAGAAGTTCAGAAGATGAACACGGTTTGAATTTGGGAACCAGAAATTCGCCTCCAGGACTGCAAGTAAGCGATGAAAGGGCAGCAGAAGGGGTTTTGGTTATGGAGAAAAGCAAAAAAACGAAGGTAGTACACCAAGACGAGCTTATGCTTATGTTAGGAGAGAAAAAGCATCAAGTACAATTTGCTTATTGCTGCCCTGTTCAAACTGGCAACTTGAAAGAGGCCAAAAGCACTTCGGGAAACGACGATCAGCTTTGCAAATCTGAGAGAGGCTCTCGGCTTCTCCGCAGATTATCTGCGGAACTTTCAAATGAGCTTTCTGAGGGGAACATCCAAGACTTTGAGGATCACCTTGAAGTGGCATCGTTTCGCGCATCCGTTTGCTTGAAGGAAAACTGCCCTCACAGATTACTGGATGGCCATGGCGTTCGGAATAAATCTGAAGAAGCAGTTTATTTCTGCTGCAGTTGGGCAATGGCAGATGAGAAGCTTGCATGGCAAGTCATTTCAATCTGTCAAAATTTCTCCATGCACGAGCAAAACAAGGGGGCTTCTACCCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0030154 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Beta-Casp Lactamase_B_6 RMMBL zf-RING_2

Protein Analysis

691

Amino Acids

77.7

Weight (kDa)

8.74

Isoelectric Point (pI)

39.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01730 AT2G01730
fragaria_vesca	FvH4_4g33520
malus_domestica	MD16G1018300.v1.1
prunus_persica	Prupe.1G333600_v2.0.a1
pyrus_communis	pycom16g01670
rosa_chinensis	RchiOBHm_Chr3g0480131 RchiOBHm_Chr4g0443031
rosa_laevigata	RLG00000005961
rosa_multiflora	Rmu_co8263599.1_g000001 Rmu_sc0006604.1_g000001 Rmu_sc0006604.1_g000004 Rmu_sc0008055.1_g000002 Rmu_sc0011261.1_g000006
rosa_roxburghii	Rroxscaffold_5G00383660
rosa_rugosa	Rorug04G0343900
rosa_samantha	Rh3AG232100 Rh3CG261900 Rh3DG257700 Rh4AG398100 Rh4BG409600 Rh4CG425100 Rh4DG404400
rosa_wichuraiana	Rw3G020840 Rw4G034290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	98
Acc36I	ACCTGC	2 cut(s)	505, 884
AccB1I	GGYRCC	1 cut(s)	107
AccII	CGCG	5 cut(s)	54, 67, 720, 1445, 1881
AciI	CCGC	8 cut(s)	65, 177, 205, 208, 339, 570, 1795, 1808
AclWI	GGATC	3 cut(s)	504, 1296, 1863
AcoI	YGGCCR	2 cut(s)	84, 1927
AcsI	RAATTY	7 cut(s)	673, 746, 1298, 1386, 1537, 1552, 2029
AcuI	CTGAAG	2 cut(s)	521, 1971
AcyI	GRCGYC	3 cut(s)	108, 597, 1272
AfaI	GTAC	5 cut(s)	489, 611, 968, 1638, 1686
AfiI	CCNNNNNNNGG	2 cut(s)	1062, 1867
AflIII	ACRYGT	2 cut(s)	556, 1464
AjiI	CACGTC	1 cut(s)	1318
AjnI	CCWGG	3 cut(s)	1033, 1060, 1561
AleI	CACNNNNGTG	1 cut(s)	605
AloI	GAACNNNNNNTCC	2 cut(s)	1029, 1061
Alw21I	GWGCWC	1 cut(s)	823
Alw26I	GTCTC	4 cut(s)	390, 588, 612, 1409
AlwI	GGATC	3 cut(s)	504, 1296, 1863
AlwNI	CAGNNNCTG	1 cut(s)	829
Ama87I	CYCGRG	2 cut(s)	735, 1139
AoxI	GGCC	4 cut(s)	35, 84, 1731, 1927
ApeKI	GCWGC	6 cut(s)	132, 653, 776, 1589, 1701, 1971
ApoI	RAATTY	7 cut(s)	673, 746, 1298, 1386, 1537, 1552, 2029
ArsI	GACNNNNNNTTYG	2 cut(s)	368, 400
Asp700I	GAANNNNTTC	1 cut(s)	1480
AspLEI	GCGC	6 cut(s)	54, 56, 69, 110, 861, 1883
AspS9I	GGNCC	5 cut(s)	36, 350, 679, 942, 1037
AsuC2I	CCSGG	5 cut(s)	112, 736, 737, 1140, 1141
AsuHPI	GGTGA	5 cut(s)	4, 154, 277, 319, 1850
AsuII	TTCGAA	1 cut(s)	1484
AvaI	CYCGRG	2 cut(s)	735, 1139
AvaII	GGWCC	4 cut(s)	350, 679, 942, 1037
BalI	TGGCCA	2 cut(s)	86, 1929
BanI	GGYRCC	1 cut(s)	107
BanII	GRGCYC	3 cut(s)	316, 823, 1111
BauI	CACGAG	1 cut(s)	2042
Bbv12I	GWGCWC	1 cut(s)	823
BbvI	GCAGC	6 cut(s)	119, 665, 763, 1601, 1688, 1958
BccI	CCATC	5 cut(s)	95, 412, 1342, 1438, 1919
BciT130I	CCWGG	3 cut(s)	1035, 1062, 1563
BciVI	GTATCC	1 cut(s)	378
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	5 cut(s)	112, 736, 737, 1140, 1141
BcoDI	GTCTC	4 cut(s)	390, 588, 612, 1409
BfmI	CTRYAG	2 cut(s)	1972, 2069
BfoI	RGCGCY	1 cut(s)	111
BfuAI	ACCTGC	2 cut(s)	505, 884
BfuI	GTATCC	1 cut(s)	378
BisI	GCNGC	9 cut(s)	65, 133, 208, 570, 654, 777, 1590, 1702, 1972
BlsI	GCNGC	9 cut(s)	66, 134, 209, 571, 655, 778, 1591, 1703, 1973
Bme1390I	CCNGG	8 cut(s)	112, 736, 737, 1035, 1062, 1140, 1141, 1563
Bme18I	GGWCC	4 cut(s)	350, 679, 942, 1037
BmeT110I	CYCGRG	2 cut(s)	735, 1139
BmgBI	CACGTC	1 cut(s)	1318
BmgT120I	GGNCC	5 cut(s)	36, 350, 679, 942, 1037
BmiI	GGNNCC	8 cut(s)	109, 351, 568, 876, 1039, 1110, 1159, 1546
BmrFI	CCNGG	8 cut(s)	112, 736, 737, 1035, 1062, 1140, 1141, 1563
BmrI	ACTGGG	2 cut(s)	862, 1114
BmsI	GCATC	8 cut(s)	285, 652, 918, 1014, 1223, 1687, 1880, 1892
BmuI	ACTGGG	2 cut(s)	862, 1114
BplI	GAGNNNNNCTC	6 cut(s)	735, 767, 1766, 1798, 1768, 1800
BpmI	CTGGAG	1 cut(s)	1545
Bpu10I	CCTNAGC	1 cut(s)	822
Bpu14I	TTCGAA	1 cut(s)	1484
BpuEI	CTTGAG	1 cut(s)	1109
BpuMI	CCSGG	5 cut(s)	112, 736, 737, 1140, 1141
BsaAI	YACGTR	1 cut(s)	702
BsaBI	GATNNNNATC	2 cut(s)	642, 932
BsaHI	GRCGYC	3 cut(s)	108, 597, 1272
BsaI	GGTCTC	1 cut(s)	1409
BsaJI	CCNNGG	6 cut(s)	103, 735, 1061, 1139, 1343, 1930
Bsc4I	CCNNNNNNNGG	2 cut(s)	1062, 1867
Bse118I	RCCGGY	2 cut(s)	33, 779
Bse1I	ACTGG	7 cut(s)	491, 857, 945, 1109, 1372, 1720, 1926
Bse3DI	GCAATG	3 cut(s)	462, 579, 1989
Bse8I	GATNNNNATC	2 cut(s)	642, 932
BseBI	CCWGG	3 cut(s)	1035, 1062, 1563
BseDI	CCNNGG	6 cut(s)	103, 735, 1061, 1139, 1343, 1930
BseGI	GGATG	7 cut(s)	933, 1071, 1353, 1470, 1839, 1883, 1930
BseJI	GATNNNNATC	2 cut(s)	642, 932
BseLI	CCNNNNNNNGG	2 cut(s)	1062, 1867
BseMI	GCAATG	3 cut(s)	462, 579, 1989
BseMII	CTCAG	5 cut(s)	766, 836, 903, 1764, 1821
BseNI	ACTGG	7 cut(s)	491, 857, 945, 1109, 1372, 1720, 1926
BsePI	GCGCGC	1 cut(s)	52
BseXI	GCAGC	6 cut(s)	119, 665, 763, 1601, 1688, 1958
BseYI	CCCAGC	1 cut(s)	1381
BsgI	GTGCAG	1 cut(s)	533
Bsh1236I	CGCG	5 cut(s)	54, 67, 720, 1445, 1881
BshFI	GGCC	4 cut(s)	37, 86, 1733, 1929
BshNI	GGYRCC	1 cut(s)	107
BsiHKAI	GWGCWC	1 cut(s)	823
BsiHKCI	CYCGRG	2 cut(s)	735, 1139
BsiSI	CCGG	5 cut(s)	34, 111, 736, 780, 1140
BslI	CCNNNNNNNGG	2 cut(s)	1062, 1867
BsmAI	GTCTC	4 cut(s)	390, 588, 612, 1409
BsmBI	CGTCTC	1 cut(s)	588
BsmI	GAATGC	2 cut(s)	186, 228
BsnI	GGCC	4 cut(s)	37, 86, 1733, 1929
Bso31I	GGTCTC	1 cut(s)	1409
BsoBI	CYCGRG	2 cut(s)	735, 1139
Bsp119I	TTCGAA	1 cut(s)	1484
Bsp1286I	GDGCHC	3 cut(s)	316, 823, 1111
Bsp1407I	TGTACA	1 cut(s)	609
Bsp143I	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
Bsp19I	CCATGG	1 cut(s)	1930
BspACI	CCGC	8 cut(s)	65, 177, 205, 208, 339, 570, 1795, 1808
BspANI	GGCC	4 cut(s)	37, 86, 1733, 1929
BspCNI	CTCAG	5 cut(s)	765, 835, 902, 1765, 1822
BspFNI	CGCG	5 cut(s)	54, 67, 720, 1445, 1881
BspLI	GGNNCC	8 cut(s)	109, 351, 568, 876, 1039, 1110, 1159, 1546
BspMAI	CTGCAG	1 cut(s)	1976
BspMI	ACCTGC	2 cut(s)	505, 884
BspPI	GGATC	3 cut(s)	504, 1296, 1863
BspQI	GCTCTTC	3 cut(s)	321, 435, 811
BspT104I	TTCGAA	1 cut(s)	1484
BspT107I	GGYRCC	1 cut(s)	107
BspTNI	GGTCTC	1 cut(s)	1409
BsrDI	GCAATG	3 cut(s)	462, 579, 1989
BsrFI	RCCGGY	2 cut(s)	33, 779
BsrGI	TGTACA	1 cut(s)	609
BsrI	ACTGG	7 cut(s)	491, 857, 945, 1109, 1372, 1720, 1926
BssAI	RCCGGY	2 cut(s)	33, 779
BssECI	CCNNGG	6 cut(s)	103, 735, 1061, 1139, 1343, 1930
BssHII	GCGCGC	1 cut(s)	52
BssMI	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
BssNI	GRCGYC	3 cut(s)	108, 597, 1272
BssSI	CACGAG	1 cut(s)	2042
BssT1I	CCWWGG	1 cut(s)	1930
Bst2BI	CACGAG	1 cut(s)	2042
Bst2UI	CCWGG	3 cut(s)	1035, 1062, 1563
Bst4CI	ACNGT	4 cut(s)	511, 831, 1420, 1532
Bst6I	CTCTTC	3 cut(s)	321, 435, 811
BstACI	GRCGYC	3 cut(s)	108, 597, 1272
BstAPI	GCANNNNNTGC	2 cut(s)	511, 548
BstAUI	TGTACA	1 cut(s)	609
BstBAI	YACGTR	1 cut(s)	702
BstBI	TTCGAA	1 cut(s)	1484
BstC8I	GCNNGC	4 cut(s)	35, 54, 1029, 2001
BstDEI	CTNAG	6 cut(s)	298, 752, 822, 889, 1773, 1830
BstDSI	CCRYGG	1 cut(s)	1930
BstF5I	GGATG	7 cut(s)	933, 1071, 1353, 1470, 1839, 1883, 1930
BstFNI	CGCG	5 cut(s)	54, 67, 720, 1445, 1881
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	6 cut(s)	54, 56, 69, 110, 861, 1883
BstKTI	GATC	9 cut(s)	262, 304, 499, 1015, 1071, 1204, 1291, 1759, 1858
BstMAI	GTCTC	4 cut(s)	390, 588, 612, 1409
BstMBI	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
BstMWI	GCNNNNNNNGC	4 cut(s)	511, 548, 1115, 2005
BstNI	CCWGG	3 cut(s)	1035, 1062, 1563
BstNSI	RCATGY	2 cut(s)	560, 1031
BstSCI	CCNGG	8 cut(s)	110, 734, 735, 1033, 1060, 1138, 1139, 1561
BstSFI	CTRYAG	2 cut(s)	1972, 2069
BstUI	CGCG	5 cut(s)	54, 67, 720, 1445, 1881
BstV1I	GCAGC	6 cut(s)	119, 665, 763, 1601, 1688, 1958
BstX2I	RGATCY	2 cut(s)	496, 1288
BstYI	RGATCY	2 cut(s)	496, 1288
BsuI	GTATCC	1 cut(s)	378
BsuRI	GGCC	4 cut(s)	37, 86, 1733, 1929
BtgI	CCRYGG	1 cut(s)	1930
BtgZI	GCGATG	2 cut(s)	1133, 1593
BtrI	CACGTC	1 cut(s)	1318
BtsCI	GGATG	7 cut(s)	933, 1071, 1353, 1470, 1839, 1883, 1930
BtsIMutI	CAGTG	5 cut(s)	498, 516, 1078, 1102, 1397
BveI	ACCTGC	2 cut(s)	505, 884
Cac8I	GCNNGC	4 cut(s)	35, 54, 1029, 2001
CaiI	CAGNNNCTG	1 cut(s)	829
CfoI	GCGC	6 cut(s)	54, 56, 69, 110, 861, 1883
Cfr10I	RCCGGY	2 cut(s)	33, 779
Cfr13I	GGNCC	5 cut(s)	36, 350, 679, 942, 1037
Cfr9I	CCCGGG	2 cut(s)	735, 1139
CseI	GACGC	2 cut(s)	605, 1280
Csp6I	GTAC	5 cut(s)	488, 610, 967, 1637, 1685
CspCI	CAANNNNNGTGG	2 cut(s)	1180, 1215
CviQI	GTAC	5 cut(s)	488, 610, 967, 1637, 1685
DdeI	CTNAG	6 cut(s)	298, 752, 822, 889, 1773, 1830
DinI	GGCGCC	1 cut(s)	109
DpnI	GATC	9 cut(s)	261, 303, 498, 1014, 1070, 1203, 1290, 1758, 1857
DpnII	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
DrdI	GACNNNNNNGTC	1 cut(s)	98
DseDI	GACNNNNNNGTC	1 cut(s)	98
EaeI	YGGCCR	2 cut(s)	84, 1927
Eam1104I	CTCTTC	3 cut(s)	321, 435, 811
EarI	CTCTTC	3 cut(s)	321, 435, 811
Ecl136II	GAGCTC	1 cut(s)	821
Eco130I	CCWWGG	1 cut(s)	1930
Eco24I	GRGCYC	3 cut(s)	316, 823, 1111
Eco31I	GGTCTC	1 cut(s)	1409
Eco47I	GGWCC	4 cut(s)	350, 679, 942, 1037
Eco53kI	GAGCTC	1 cut(s)	821
Eco57I	CTGAAG	2 cut(s)	521, 1971
Eco88I	CYCGRG	2 cut(s)	735, 1139
EcoICRI	GAGCTC	1 cut(s)	821
EcoRI	GAATTC	1 cut(s)	1386
EcoRII	CCWGG	3 cut(s)	1033, 1060, 1561
EcoT14I	CCWWGG	1 cut(s)	1930
EcoT22I	ATGCAT	1 cut(s)	1029
EcoT38I	GRGCYC	3 cut(s)	316, 823, 1111
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	1 cut(s)	1930
Esp3I	CGTCTC	1 cut(s)	588
FalI	AAGNNNNNCTT	2 cut(s)	1635, 1667
FbaI	TGATCA	1 cut(s)	1068
Fnu4HI	GCNGC	9 cut(s)	65, 133, 208, 570, 654, 777, 1590, 1702, 1972
FokI	GGATG	7 cut(s)	940, 1078, 1360, 1457, 1826, 1870, 1937
FriOI	GRGCYC	3 cut(s)	316, 823, 1111
Fsp4HI	GCNGC	9 cut(s)	65, 133, 208, 570, 654, 777, 1590, 1702, 1972
GlaI	GCGC	6 cut(s)	53, 55, 68, 109, 860, 1882
GluI	GCNGC	9 cut(s)	65, 133, 208, 570, 654, 777, 1590, 1702, 1972
GsaI	CCCAGC	1 cut(s)	1385
GsuI	CTGGAG	1 cut(s)	1545
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	4 cut(s)	37, 86, 1733, 1929
HapII	CCGG	5 cut(s)	34, 111, 736, 780, 1140
HgaI	GACGC	2 cut(s)	605, 1280
HhaI	GCGC	6 cut(s)	54, 56, 69, 110, 861, 1883
Hin1I	GRCGYC	3 cut(s)	108, 597, 1272
Hin6I	GCGC	6 cut(s)	52, 54, 67, 108, 859, 1881
HinP1I	GCGC	6 cut(s)	52, 54, 67, 108, 859, 1881
HindIII	AAGCTT	1 cut(s)	1997
HpaII	CCGG	5 cut(s)	34, 111, 736, 780, 1140
HphI	GGTGA	5 cut(s)	4, 154, 277, 319, 1850
Hpy166II	GTNNAC	3 cut(s)	610, 612, 1639
Hpy188III	TCNNGA	6 cut(s)	197, 824, 1182, 1205, 1504, 1746
Hpy8I	GTNNAC	3 cut(s)	610, 612, 1639
Hpy99I	CGWCG	1 cut(s)	1757
HpyAV	CCTTC	8 cut(s)	423, 539, 692, 914, 1122, 1589, 1624, 1891
HpyCH4III	ACNGT	4 cut(s)	511, 831, 1420, 1532
HpyCH4IV	ACGT	6 cut(s)	306, 365, 701, 965, 1317, 1464
HpyF10VI	GCNNNNNNNGC	4 cut(s)	511, 548, 1115, 2005
HpyF3I	CTNAG	6 cut(s)	298, 752, 822, 889, 1773, 1830
HpySE526I	ACGT	6 cut(s)	306, 365, 701, 965, 1317, 1464
Hsp92I	GRCGYC	3 cut(s)	108, 597, 1272
HspAI	GCGC	6 cut(s)	52, 54, 67, 108, 859, 1881
KasI	GGCGCC	1 cut(s)	107
KroI	GCCGGC	1 cut(s)	33
KroNI	GCCGGC	1 cut(s)	35
Ksp22I	TGATCA	1 cut(s)	1068
Kzo9I	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
LguI	GCTCTTC	3 cut(s)	321, 435, 811
LmnI	GCTCC	7 cut(s)	424, 566, 650, 856, 1036, 1114, 1378
Lsp1109I	GCAGC	6 cut(s)	119, 665, 763, 1601, 1688, 1958
LweI	GCATC	8 cut(s)	285, 652, 918, 1014, 1223, 1687, 1880, 1892
MaeII	ACGT	6 cut(s)	306, 365, 701, 965, 1317, 1464
MaeIII	GTNAC	4 cut(s)	4, 142, 1129, 1394
MalI	GATC	9 cut(s)	261, 303, 498, 1014, 1070, 1203, 1290, 1758, 1857
MboI	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
MboII	GAAGA	7 cut(s)	308, 452, 490, 828, 857, 1532, 1964
MflI	RGATCY	2 cut(s)	496, 1288
MhlI	GDGCHC	3 cut(s)	316, 823, 1111
MlsI	TGGCCA	2 cut(s)	86, 1929
MluNI	TGGCCA	2 cut(s)	86, 1929
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	2 cut(s)	86, 257
MmeI	TCCRAC	7 cut(s)	378, 395, 822, 824, 920, 1356, 1485
Mox20I	TGGCCA	2 cut(s)	86, 1929
Mph1103I	ATGCAT	1 cut(s)	1029
MroNI	GCCGGC	1 cut(s)	33
MroXI	GAANNNNTTC	1 cut(s)	1480
MscI	TGGCCA	2 cut(s)	86, 1929
MseI	TTAA	1 cut(s)	993
MslI	CAYNNNNRTG	2 cut(s)	605, 768
Msp20I	TGGCCA	2 cut(s)	86, 1929
MspI	CCGG	5 cut(s)	34, 111, 736, 780, 1140
MspR9I	CCNGG	8 cut(s)	112, 736, 737, 1035, 1062, 1140, 1141, 1563
Mva1269I	GAATGC	2 cut(s)	186, 228
MvaI	CCWGG	3 cut(s)	1035, 1062, 1563
MvnI	CGCG	5 cut(s)	54, 67, 720, 1445, 1881
MwoI	GCNNNNNNNGC	4 cut(s)	511, 548, 1115, 2005
NaeI	GCCGGC	1 cut(s)	35
NarI	GGCGCC	1 cut(s)	108
NciI	CCSGG	5 cut(s)	112, 736, 737, 1140, 1141
NcoI	CCATGG	1 cut(s)	1930
NdeII	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
NgoMIV	GCCGGC	1 cut(s)	33
NlaIV	GGNNCC	8 cut(s)	109, 351, 568, 876, 1039, 1110, 1159, 1546
NmeAIII	GCCGAG	4 cut(s)	84, 493, 1368, 1765
NmuCI	GTSAC	1 cut(s)	142
NsiI	ATGCAT	1 cut(s)	1029
NspI	RCATGY	2 cut(s)	560, 1031
NspV	TTCGAA	1 cut(s)	1484
OliI	CACNNNNGTG	1 cut(s)	605
PaeI	GCATGC	1 cut(s)	1031
PauI	GCGCGC	1 cut(s)	52
PciI	ACATGT	1 cut(s)	556
PciSI	GCTCTTC	3 cut(s)	321, 435, 811
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PctI	GAATGC	2 cut(s)	186, 228
PdiI	GCCGGC	1 cut(s)	35
PdmI	GAANNNNTTC	1 cut(s)	1480
PfeI	GAWTC	9 cut(s)	24, 162, 695, 722, 865, 1123, 1240, 1354, 1486
PflFI	GACNNNGTC	1 cut(s)	1420
PfoI	TCCNGGA	2 cut(s)	1033, 1561
PkrI	GCNGC	9 cut(s)	66, 134, 209, 571, 655, 778, 1591, 1703, 1973
PleI	GAGTC	2 cut(s)	86, 256
PluTI	GGCGCC	1 cut(s)	111
PpsI	GAGTC	2 cut(s)	86, 256
Ppu21I	YACGTR	1 cut(s)	702
PscI	ACATGT	1 cut(s)	556
Psp124BI	GAGCTC	1 cut(s)	823
Psp6I	CCWGG	3 cut(s)	1033, 1060, 1561
PspFI	CCCAGC	1 cut(s)	1381
PspGI	CCWGG	3 cut(s)	1033, 1060, 1561
PspN4I	GGNNCC	8 cut(s)	109, 351, 568, 876, 1039, 1110, 1159, 1546
PspPI	GGNCC	5 cut(s)	36, 350, 679, 942, 1037
PstI	CTGCAG	1 cut(s)	1976
PstNI	CAGNNNCTG	1 cut(s)	829
PsuI	RGATCY	2 cut(s)	496, 1288
PsyI	GACNNNGTC	1 cut(s)	1420
PteI	GCGCGC	1 cut(s)	52
RsaI	GTAC	5 cut(s)	489, 611, 968, 1638, 1686
RsaNI	GTAC	5 cut(s)	488, 610, 967, 1637, 1685
RseI	CAYNNNNRTG	2 cut(s)	605, 768
SacI	GAGCTC	1 cut(s)	823
SapI	GCTCTTC	3 cut(s)	321, 435, 811
SaqAI	TTAA	1 cut(s)	993
SatI	GCNGC	9 cut(s)	65, 133, 208, 570, 654, 777, 1590, 1702, 1972
Sau3AI	GATC	9 cut(s)	259, 301, 496, 1012, 1068, 1201, 1288, 1756, 1855
Sau96I	GGNCC	5 cut(s)	36, 350, 679, 942, 1037
SchI	GAGTC	2 cut(s)	86, 257
ScrFI	CCNGG	8 cut(s)	112, 736, 737, 1035, 1062, 1140, 1141, 1563
SduI	GDGCHC	3 cut(s)	316, 823, 1111
SfaNI	GCATC	8 cut(s)	285, 652, 918, 1014, 1223, 1687, 1880, 1892
SfcI	CTRYAG	2 cut(s)	1972, 2069
SfoI	GGCGCC	1 cut(s)	109
SfuI	TTCGAA	1 cut(s)	1484
SinI	GGWCC	4 cut(s)	350, 679, 942, 1037
SmaI	CCCGGG	2 cut(s)	737, 1141
SmiMI	CAYNNNNRTG	2 cut(s)	605, 768
SmlI	CTYRAG	1 cut(s)	1088
SmoI	CTYRAG	1 cut(s)	1088
SphI	GCATGC	1 cut(s)	1031
SsiI	CCGC	8 cut(s)	65, 177, 205, 208, 339, 570, 1795, 1808
SspDI	GGCGCC	1 cut(s)	107
SstI	GAGCTC	1 cut(s)	823
StyD4I	CCNGG	8 cut(s)	110, 734, 735, 1033, 1060, 1138, 1139, 1561
StyI	CCWWGG	1 cut(s)	1930
TaaI	ACNGT	4 cut(s)	511, 831, 1420, 1532
TaiI	ACGT	6 cut(s)	309, 368, 704, 968, 1320, 1467
TaqII	GACCGA	1 cut(s)	681
TatI	WGTACW	3 cut(s)	609, 1636, 1684
TauI	GCSGC	3 cut(s)	67, 210, 572
TfiI	GAWTC	9 cut(s)	24, 162, 695, 722, 865, 1123, 1240, 1354, 1486
Tru1I	TTAA	1 cut(s)	993
Tru9I	TTAA	1 cut(s)	993
TscAI	CASTG	5 cut(s)	498, 516, 1078, 1109, 1397
TseFI	GTSAC	1 cut(s)	142
TseI	GCWGC	6 cut(s)	132, 653, 776, 1589, 1701, 1971
Tsp45I	GTSAC	1 cut(s)	142
TspDTI	ATGAA	9 cut(s)	491, 752, 878, 1136, 1232, 1319, 1459, 1539, 1596
TspGWI	ACGGA	2 cut(s)	527, 1876
TspMI	CCCGGG	2 cut(s)	735, 1139
TspRI	CASTG	5 cut(s)	498, 516, 1078, 1109, 1397
Tth111I	GACNNNGTC	1 cut(s)	1420
VpaK11BI	GGWCC	4 cut(s)	350, 679, 942, 1037
XapI	RAATTY	7 cut(s)	673, 746, 1298, 1386, 1537, 1552, 2029
XceI	RCATGY	2 cut(s)	560, 1031
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1201, 1282
XmaI	CCCGGG	2 cut(s)	735, 1139
XmnI	GAANNNNTTC	1 cut(s)	1480
Zsp2I	ATGCAT	1 cut(s)	1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.