Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011261.1

Orthogroup ID

OG0007353

Physical Location & Seq

Genomic Coordinates Forward (+)

17949 .. 30460

Gene Structure 12512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011261.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

atgtatttgactgatgatgagttgttgcttcataattatactgttttatctaattatgggattccgccgaataagataggaaagatttacagggaagcaacagaggtctttcaatatgattttcaggttttggcatcaaaacttcaagcttatgaagaactaggtcttagccgttctgctttagttcgctatgttgttggtagtccttatcttttggttggggatgtcaatgcagtatttgtttcagtattggaaaaattgaagagtattggatttgaaaccaataggattgaggggaatttatgggaagataacacttattattggagccggatgcttgaagttttgagtttgtttagtgagatgggttgcagtgatgagcagttgggcaagctacttcgtcacaacccagatattttatttgaaagttcgggggaaatgacagtttcactgattggtgaccgaactagggacactcccgaactcgagcgctgtttctcctcctctccgtctcggagctccagcctccagactgtgaattgtatgtttatcattaatgctggttctggttttagaatgttgtggagcactgtgaagtccttccttgatcccaagataactgaaaagattaatgtccttggtgacaagagcaagttacttcaaataattgatgctagatggcttttcttggcgtgtcaccctcgcttgtggctgcgagttgaacgatccattaaagatccattggagcctggcgtcttccccagcattgagagtttgaggcagcggttactgccgcaaggcgctgggcaagaggtaggcaagagctgtgtgattgtgacgataaacgggaaacgcatcatgttcgactgtggtatgcatatgggccacctcgaccaccgccgctacccggacttctctctcatcggcccaaacttcaatcaaaccctcacttgcatcatcattactcactttcatctggatcacatcggcgcgctcccttacttcactgaagtgtgcggttacagtggccccatttacatgacgtatccgacgaaggcgctggcgcctttgatgttggaggattataggaaagtgatggttgagagaaggggagaggaggaacagtttacgtcggagcacattgtcgaatgcatgaagaaagttataccggtggacctgaagcagacggtgcaggttgataaggatcttcaaatccgtgcttactatgccggacatgtaaggctttcgtgtcgtcaatttgctcgactgttgagtcctgaactcctgatcaaaatttcttatgctttcaaggttcttggagctgcaatgttttatgcaaaggtgggagacgctgctatggtgtacacaggagactataatatgacaccagataggcatcttggagcagctcaaattgatcgactaagtttggaccttgttattacagagtccacatatgcaacaaccattcgtgattcaaaatatgcccgggaaagagaatttctcagagctgttcacacttgtgttgctggtgggggaaaagtgctaattccttcatttgctctgggaagagctcaggaactctgtatcttattggaagactactgggagcgcatgaatttaaaagttcctatttacttctcagcaggtttgacgcgtcaagccaatatgtattataagatgctcatcagttggaccagccagaaaatcaaagagacatactccacacataatgcatttgattttaaaaatgttcacaaatttgaacggtctatgatagatgctcctggaccttgtgttctgtttgccacaccagggatgatcagtggtggtttttcacttgaggtttttaagcactgggctccttcagaaaagaatcttgttacaatgccagggtattgcgtggctggaaccataggacataaattaatgtcgggtaaaccgaccaaaattgatctggacaaggacacccgaattgatgtgcgatgccagattcatcaattgactttcagtcctcatacagatgccaaagggattatggatctgcttttcctcttggatccttctgaagagaaaccatcatggagaattttgaacgttcccgggcaaccacctaaatttgcttggggtcacagcacctgcgtggtcggagggacaagggtcctggtactgggtggccacacaggtgaggagtggatactcaatgacttgcatgagttgtgcttagcaagcaggcaggattcagacctatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009553 GO:0009559 GO:0009561 GO:0009987 GO:0010197 GO:0016043 GO:0030154 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Beta-Casp Lactamase_B_6 RMMBL zf-RING_2

Protein Analysis

750

Amino Acids

84.96

Weight (kDa)

6.75

Isoelectric Point (pI)

41.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01730 AT2G01730
fragaria_vesca	FvH4_4g33520
malus_domestica	MD16G1018300.v1.1
prunus_persica	Prupe.1G333600_v2.0.a1
pyrus_communis	pycom16g01670
rosa_chinensis	RchiOBHm_Chr3g0480131 RchiOBHm_Chr4g0443031
rosa_laevigata	RLG00000005961
rosa_multiflora	Rmu_co8263599.1_g000001 Rmu_sc0006604.1_g000001 Rmu_sc0006604.1_g000004 Rmu_sc0008055.1_g000002 Rmu_sc0011261.1_g000006
rosa_roxburghii	Rroxscaffold_5G00383660
rosa_rugosa	Rorug04G0343900
rosa_samantha	Rh3AG232100 Rh3CG261900 Rh3DG257700 Rh4AG398100 Rh4BG409600 Rh4CG425100 Rh4DG404400
rosa_wichuraiana	Rw3G020840 Rw4G034290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1677
AarI	CACCTGC	1 cut(s)	2147
AasI	GACNNNNNNGTC	1 cut(s)	1272
Acc36I	ACCTGC	3 cut(s)	1183, 1637, 2147
AccB1I	GGYRCC	1 cut(s)	1063
AccII	CGCG	2 cut(s)	992, 1657
AciI	CCGC	6 cut(s)	65, 784, 794, 898, 901, 1017
AclI	AACGTT	1 cut(s)	2097
AclWI	GGATC	8 cut(s)	602, 720, 731, 987, 1212, 2049, 2054, 2067
AcoI	YGGCCR	1 cut(s)	2176
AcsI	RAATTY	7 cut(s)	298, 1293, 1499, 1618, 1760, 2088, 2117
AcuI	CTGAAG	4 cut(s)	1029, 1199, 1851, 2088
AcyI	GRCGYC	2 cut(s)	753, 1064
AfaI	GTAC	2 cut(s)	1364, 2169
AfeI	AGCGCT	1 cut(s)	491
AfiI	CCNNNNNNNGG	4 cut(s)	469, 907, 1815, 2170
AflIII	ACRYGT	2 cut(s)	1234, 1655
AgeI	ACCGGT	1 cut(s)	1168
AhdI	GACNNNNNGTC	1 cut(s)	2010
AjnI	CCWGG	5 cut(s)	748, 1786, 1813, 1891, 2163
AleI	CACNNNNGTG	4 cut(s)	1010, 1521, 2141, 2184
AloI	GAACNNNNNNTCC	2 cut(s)	1782, 1814
AluBI	AGCT	8 cut(s)	149, 394, 519, 825, 1322, 1409, 1511, 1574
AluI	AGCT	8 cut(s)	149, 394, 519, 825, 1322, 1409, 1511, 1574
Alw21I	GWGCWC	4 cut(s)	521, 590, 1140, 1576
Alw26I	GTCTC	4 cut(s)	516, 1341, 1365, 1709
AlwI	GGATC	8 cut(s)	602, 720, 731, 987, 1212, 2049, 2054, 2067
AlwNI	CAGNNNCTG	1 cut(s)	2139
Ama87I	CYCGRG	3 cut(s)	485, 1488, 2102
Aor51HI	AGCGCT	1 cut(s)	491
AoxI	GGCC	4 cut(s)	883, 925, 1027, 2176
ApeKI	GCWGC	5 cut(s)	712, 781, 1322, 1352, 1406
ApoI	RAATTY	7 cut(s)	298, 1293, 1499, 1618, 1760, 2088, 2117
AseI	ATTAAT	3 cut(s)	555, 630, 1928
AsiGI	ACCGGT	1 cut(s)	1168
Asp700I	GAANNNNTTC	1 cut(s)	599
AspLEI	GCGC	7 cut(s)	492, 803, 992, 994, 1060, 1066, 1614
AspS9I	GGNCC	8 cut(s)	883, 926, 1028, 1174, 1432, 1695, 1790, 2161
AsuC2I	CCSGG	5 cut(s)	908, 1489, 1490, 2103, 2104
AsuHPI	GGTGA	4 cut(s)	470, 653, 689, 2198
AvaI	CYCGRG	3 cut(s)	485, 1488, 2102
AvaII	GGWCC	5 cut(s)	1174, 1432, 1695, 1790, 2161
BalI	TGGCCA	1 cut(s)	2178
BamHI	GGATCC	1 cut(s)	2059
BanI	GGYRCC	1 cut(s)	1063
BanII	GRGCYC	3 cut(s)	521, 1576, 1864
BbsI	GAAGAC	2 cut(s)	748, 1605
Bbv12I	GWGCWC	4 cut(s)	521, 590, 1140, 1576
BbvI	GCAGC	5 cut(s)	699, 793, 1309, 1339, 1418
BccI	CCATC	4 cut(s)	358, 672, 1090, 2086
BceAI	ACGGC	1 cut(s)	156
BcgI	CGANNNNNNTGC	2 cut(s)	844, 878
BciT130I	CCWGG	5 cut(s)	750, 1788, 1815, 1893, 2165
BciVI	GTATCC	2 cut(s)	1056, 2190
BclI	TGATCA	2 cut(s)	1287, 1821
BcnI	CCSGG	5 cut(s)	908, 1489, 1490, 2103, 2104
BcoDI	GTCTC	4 cut(s)	516, 1341, 1365, 1709
BfaI	CTAG	3 cut(s)	161, 468, 675
BfoI	RGCGCY	4 cut(s)	493, 804, 1061, 1067
BfuAI	ACCTGC	3 cut(s)	1183, 1637, 2147
BfuI	GTATCC	2 cut(s)	1056, 2190
BisI	GCNGC	7 cut(s)	713, 782, 794, 901, 1323, 1353, 1407
BlpI	GCTNAGC	1 cut(s)	2224
BlsI	GCNGC	7 cut(s)	714, 783, 795, 902, 1324, 1354, 1408
Bme18I	GGWCC	5 cut(s)	1174, 1432, 1695, 1790, 2161
BmeRI	GACNNNNNGTC	1 cut(s)	2010
BmeT110I	CYCGRG	3 cut(s)	485, 1488, 2102
BmgT120I	GGNCC	8 cut(s)	883, 926, 1028, 1174, 1432, 1695, 1790, 2161
BmiI	GGNNCC	8 cut(s)	329, 747, 1030, 1065, 1863, 1912, 2061, 2162
BmrI	ACTGGG	3 cut(s)	1615, 1867, 2180
BmuI	ACTGGG	3 cut(s)	1615, 1867, 2180
BoxI	GACNNNNGTC	1 cut(s)	2159
BpiI	GAAGAC	2 cut(s)	748, 1605
BplI	GAGNNNNNCTC	4 cut(s)	1488, 1520, 1706, 1738
BpmI	CTGGAG	2 cut(s)	505, 512
Bpu10I	CCTNAGC	1 cut(s)	1575
Bpu1102I	GCTNAGC	1 cut(s)	2224
BpuEI	CTTGAG	1 cut(s)	1862
BpuMI	CCSGG	5 cut(s)	908, 1489, 1490, 2103, 2104
BsaBI	GATNNNNATC	3 cut(s)	1203, 1395, 1685
BsaHI	GRCGYC	2 cut(s)	753, 1064
BsaJI	CCNNGG	5 cut(s)	637, 1488, 1814, 1892, 2102
BsaWI	WCCGGW	1 cut(s)	1168
BsaXI	ACNNNNNCTCC	2 cut(s)	1109, 1139
Bsc4I	CCNNNNNNNGG	4 cut(s)	469, 907, 1815, 2170
Bse118I	RCCGGY	1 cut(s)	1168
Bse1I	ACTGG	3 cut(s)	1610, 1862, 2175
Bse3DI	GCAATG	1 cut(s)	1332
Bse8I	GATNNNNATC	3 cut(s)	1203, 1395, 1685
BseBI	CCWGG	5 cut(s)	750, 1788, 1815, 1893, 2165
BseDI	CCNNGG	5 cut(s)	637, 1488, 1814, 1892, 2102
BseGI	GGATG	3 cut(s)	229, 339, 1824
BseJI	GATNNNNATC	3 cut(s)	1203, 1395, 1685
BseLI	CCNNNNNNNGG	4 cut(s)	469, 907, 1815, 2170
BseMI	GCAATG	1 cut(s)	1332
BseMII	CTCAG	3 cut(s)	1519, 1589, 1656
BseNI	ACTGG	3 cut(s)	1610, 1862, 2175
BsePI	GCGCGC	1 cut(s)	990
BseRI	GAGGAG	4 cut(s)	490, 493, 1130, 2204
BseXI	GCAGC	5 cut(s)	699, 793, 1309, 1339, 1418
BseYI	CCCAGC	2 cut(s)	761, 803
BsgI	GTGCAG	1 cut(s)	1211
Bsh1236I	CGCG	2 cut(s)	992, 1657
BshFI	GGCC	4 cut(s)	885, 927, 1029, 2178
BshNI	GGYRCC	1 cut(s)	1063
BshTI	ACCGGT	1 cut(s)	1168
BsiHKAI	GWGCWC	4 cut(s)	521, 590, 1140, 1576
BsiHKCI	CYCGRG	3 cut(s)	485, 1488, 2102
BsiSI	CCGG	6 cut(s)	331, 908, 1169, 1230, 1489, 2103
BslFI	GGGAC	2 cut(s)	485, 2167
BslI	CCNNNNNNNGG	4 cut(s)	469, 907, 1815, 2170
BsmAI	GTCTC	4 cut(s)	516, 1341, 1365, 1709
BsmBI	CGTCTC	2 cut(s)	516, 1341
BsmFI	GGGAC	2 cut(s)	485, 2167
BsmI	GAATGC	1 cut(s)	1154
BsnI	GGCC	4 cut(s)	885, 927, 1029, 2178
BsoBI	CYCGRG	3 cut(s)	485, 1488, 2102
Bsp1286I	GDGCHC	5 cut(s)	521, 590, 1140, 1576, 1864
Bsp1407I	TGTACA	1 cut(s)	1362
Bsp1720I	GCTNAGC	1 cut(s)	2224
BspACI	CCGC	6 cut(s)	65, 784, 794, 898, 901, 1017
BspANI	GGCC	4 cut(s)	885, 927, 1029, 2178
BspCNI	CTCAG	3 cut(s)	1518, 1588, 1655
BspFNI	CGCG	2 cut(s)	992, 1657
BspLI	GGNNCC	8 cut(s)	329, 747, 1030, 1065, 1863, 1912, 2061, 2162
BspMI	ACCTGC	3 cut(s)	1183, 1637, 2147
BspPI	GGATC	8 cut(s)	602, 720, 731, 987, 1212, 2049, 2054, 2067
BspQI	GCTCTTC	1 cut(s)	1564
BspT107I	GGYRCC	1 cut(s)	1063
BsrDI	GCAATG	1 cut(s)	1332
BsrFI	RCCGGY	1 cut(s)	1168
BsrGI	TGTACA	1 cut(s)	1362
BsrI	ACTGG	3 cut(s)	1610, 1862, 2175
BssAI	RCCGGY	1 cut(s)	1168
BssECI	CCNNGG	5 cut(s)	637, 1488, 1814, 1892, 2102
BssHII	GCGCGC	1 cut(s)	990
BssNI	GRCGYC	2 cut(s)	753, 1064
BssT1I	CCWWGG	1 cut(s)	637
Bst2UI	CCWGG	5 cut(s)	750, 1788, 1815, 1893, 2165
Bst6I	CTCTTC	3 cut(s)	257, 1564, 2064
BstACI	GRCGYC	2 cut(s)	753, 1064
BstAPI	GCANNNNNTGC	1 cut(s)	1189
BstAUI	TGTACA	1 cut(s)	1362
BstC8I	GCNNGC	5 cut(s)	392, 992, 1062, 2230, 2234
BstDEI	CTNAG	6 cut(s)	167, 1424, 1505, 1575, 1642, 2224
BstEII	GGTNACC	1 cut(s)	458
BstF5I	GGATG	3 cut(s)	229, 339, 1824
BstFNI	CGCG	2 cut(s)	992, 1657
BstH2I	RGCGCY	4 cut(s)	493, 804, 1061, 1067
BstHHI	GCGC	7 cut(s)	492, 803, 992, 994, 1060, 1066, 1614
BstMAI	GTCTC	4 cut(s)	516, 1341, 1365, 1709
BstMWI	GCNNNNNNNGC	4 cut(s)	790, 1189, 1226, 2229
BstNI	CCWGG	5 cut(s)	750, 1788, 1815, 1893, 2165
BstNSI	RCATGY	1 cut(s)	1238
BstPAI	GACNNNNGTC	1 cut(s)	2159
BstPI	GGTNACC	1 cut(s)	458
BstUI	CGCG	2 cut(s)	992, 1657
BstV1I	GCAGC	5 cut(s)	699, 793, 1309, 1339, 1418
BstV2I	GAAGAC	2 cut(s)	748, 1605
BstX2I	RGATCY	4 cut(s)	736, 1204, 2041, 2059
BstYI	RGATCY	4 cut(s)	736, 1204, 2041, 2059
BsuI	GTATCC	2 cut(s)	1056, 2190
BsuRI	GGCC	4 cut(s)	885, 927, 1029, 2178
BtgZI	GCGATG	1 cut(s)	1999
BtsCI	GGATG	3 cut(s)	229, 339, 1824
BtsI	GCAGTG	1 cut(s)	379
BtsIMutI	CAGTG	7 cut(s)	379, 449, 588, 1005, 1030, 1831, 1855
BveI	ACCTGC	3 cut(s)	1183, 1637, 2147
Cac8I	GCNNGC	5 cut(s)	392, 992, 1062, 2230, 2234
CaiI	CAGNNNCTG	1 cut(s)	2139
CfoI	GCGC	7 cut(s)	492, 803, 992, 994, 1060, 1066, 1614
Cfr10I	RCCGGY	1 cut(s)	1168
Cfr13I	GGNCC	8 cut(s)	883, 926, 1028, 1174, 1432, 1695, 1790, 2161
Cfr9I	CCCGGG	2 cut(s)	1488, 2102
CseI	GACGC	4 cut(s)	742, 1358, 1646, 1663
Csp6I	GTAC	2 cut(s)	1363, 2168
CspAI	ACCGGT	1 cut(s)	1168
CviAII	CATG	7 cut(s)	859, 1039, 1153, 1235, 1615, 2082, 2213
CviQI	GTAC	2 cut(s)	1363, 2168
DdeI	CTNAG	6 cut(s)	167, 1424, 1505, 1575, 1642, 2224
DinI	GGCGCC	1 cut(s)	1065
DraI	TTTAAA	2 cut(s)	1623, 1747
DrdI	GACNNNNNNGTC	1 cut(s)	1272
DriI	GACNNNNNGTC	1 cut(s)	2010
DseDI	GACNNNNNNGTC	1 cut(s)	1272
EaeI	YGGCCR	1 cut(s)	2176
Eam1104I	CTCTTC	3 cut(s)	257, 1564, 2064
Eam1105I	GACNNNNNGTC	1 cut(s)	2010
EarI	CTCTTC	3 cut(s)	257, 1564, 2064
EciI	GGCGGA	1 cut(s)	54
Ecl136II	GAGCTC	2 cut(s)	519, 1574
Eco130I	CCWWGG	1 cut(s)	637
Eco24I	GRGCYC	3 cut(s)	521, 1576, 1864
Eco47I	GGWCC	5 cut(s)	1174, 1432, 1695, 1790, 2161
Eco47III	AGCGCT	1 cut(s)	491
Eco53kI	GAGCTC	2 cut(s)	519, 1574
Eco57I	CTGAAG	4 cut(s)	1029, 1199, 1851, 2088
Eco88I	CYCGRG	3 cut(s)	485, 1488, 2102
Eco91I	GGTNACC	1 cut(s)	458
EcoICRI	GAGCTC	2 cut(s)	519, 1574
EcoO109I	RGGNCCY	1 cut(s)	2161
EcoO65I	GGTNACC	1 cut(s)	458
EcoRII	CCWGG	5 cut(s)	748, 1786, 1813, 1891, 2163
EcoT14I	CCWWGG	1 cut(s)	637
EcoT22I	ATGCAT	3 cut(s)	879, 1154, 1738
EcoT38I	GRGCYC	3 cut(s)	521, 1576, 1864
EgeI	GGCGCC	1 cut(s)	1065
EheI	GGCGCC	1 cut(s)	1065
ErhI	CCWWGG	1 cut(s)	637
Esp3I	CGTCTC	2 cut(s)	516, 1341
FaeI	CATG	7 cut(s)	862, 1042, 1156, 1238, 1618, 2085, 2216
FaqI	GGGAC	2 cut(s)	485, 2167
FatI	CATG	7 cut(s)	858, 1038, 1152, 1234, 1614, 2081, 2212
FauNDI	CATATG	2 cut(s)	879, 1456
FbaI	TGATCA	2 cut(s)	1287, 1821
Fnu4HI	GCNGC	7 cut(s)	713, 782, 794, 901, 1323, 1353, 1407
FokI	GGATG	3 cut(s)	236, 346, 1831
FriOI	GRGCYC	3 cut(s)	521, 1576, 1864
Fsp4HI	GCNGC	7 cut(s)	713, 782, 794, 901, 1323, 1353, 1407
FspBI	CTAG	3 cut(s)	161, 468, 675
GlaI	GCGC	7 cut(s)	491, 802, 991, 993, 1059, 1065, 1613
GluI	GCNGC	7 cut(s)	713, 782, 794, 901, 1323, 1353, 1407
GsaI	CCCAGC	2 cut(s)	765, 807
GsuI	CTGGAG	2 cut(s)	505, 512
HaeII	RGCGCY	4 cut(s)	493, 804, 1061, 1067
HaeIII	GGCC	4 cut(s)	885, 927, 1029, 2178
HapII	CCGG	6 cut(s)	331, 908, 1169, 1230, 1489, 2103
HgaI	GACGC	4 cut(s)	742, 1358, 1646, 1663
HhaI	GCGC	7 cut(s)	492, 803, 992, 994, 1060, 1066, 1614
Hin1I	GRCGYC	2 cut(s)	753, 1064
Hin1II	CATG	7 cut(s)	862, 1042, 1156, 1238, 1618, 2085, 2216
Hin6I	GCGC	7 cut(s)	490, 801, 990, 992, 1058, 1064, 1612
HinP1I	GCGC	7 cut(s)	490, 801, 990, 992, 1058, 1064, 1612
HindIII	AAGCTT	1 cut(s)	147
HinfI	GANTC	7 cut(s)	61, 1273, 1448, 1475, 1876, 1993, 2240
HpaII	CCGG	6 cut(s)	331, 908, 1169, 1230, 1489, 2103
HphI	GGTGA	4 cut(s)	470, 653, 689, 2198
Hpy166II	GTNNAC	8 cut(s)	1128, 1174, 1363, 1365, 1452, 1516, 1756, 1940
Hpy188I	TCNGA	8 cut(s)	516, 1050, 1135, 1508, 1870, 2068, 2150, 2245
Hpy188III	TCNNGA	8 cut(s)	479, 529, 977, 1277, 1285, 1472, 1577, 1958
Hpy8I	GTNNAC	8 cut(s)	1128, 1174, 1363, 1365, 1452, 1516, 1756, 1940
Hpy99I	CGWCG	2 cut(s)	1054, 1135
HpyAV	CCTTC	6 cut(s)	610, 1048, 1101, 1563, 1875, 2073
HpyCH4IV	ACGT	3 cut(s)	1043, 1130, 2097
HpyF10VI	GCNNNNNNNGC	4 cut(s)	790, 1189, 1226, 2229
HpyF3I	CTNAG	6 cut(s)	167, 1424, 1505, 1575, 1642, 2224
HpySE526I	ACGT	3 cut(s)	1043, 1130, 2097
Hsp92I	GRCGYC	2 cut(s)	753, 1064
Hsp92II	CATG	7 cut(s)	862, 1042, 1156, 1238, 1618, 2085, 2216
HspAI	GCGC	7 cut(s)	490, 801, 990, 992, 1058, 1064, 1612
KasI	GGCGCC	1 cut(s)	1063
Ksp22I	TGATCA	2 cut(s)	1287, 1821
LguI	GCTCTTC	1 cut(s)	1564
Lsp1109I	GCAGC	5 cut(s)	699, 793, 1309, 1339, 1418
MaeI	CTAG	3 cut(s)	161, 468, 675
MaeII	ACGT	3 cut(s)	1043, 1130, 2097
MboII	GAAGA	9 cut(s)	167, 274, 320, 748, 1168, 1199, 1581, 1610, 2081
MfeI	CAATTG	1 cut(s)	2000
MflI	RGATCY	4 cut(s)	736, 1204, 2041, 2059
MhlI	GDGCHC	5 cut(s)	521, 590, 1140, 1576, 1864
MlsI	TGGCCA	1 cut(s)	2178
MluI	ACGCGT	1 cut(s)	1655
MluNI	TGGCCA	1 cut(s)	2178
Mly113I	GGCGCC	1 cut(s)	1064
MlyI	GAGTC	2 cut(s)	1282, 1457
MmeI	TCCRAC	5 cut(s)	1056, 1073, 1113, 1673, 2128
Mox20I	TGGCCA	1 cut(s)	2178
Mph1103I	ATGCAT	3 cut(s)	879, 1154, 1738
MroXI	GAANNNNTTC	1 cut(s)	599
MscI	TGGCCA	1 cut(s)	2178
MseI	TTAA	7 cut(s)	555, 630, 732, 1622, 1746, 1851, 1928
MslI	CAYNNNNRTG	6 cut(s)	1010, 1037, 1521, 2022, 2141, 2184
Msp20I	TGGCCA	1 cut(s)	2178
MspA1I	CMGCKG	1 cut(s)	784
MspI	CCGG	6 cut(s)	331, 908, 1169, 1230, 1489, 2103
MunI	CAATTG	1 cut(s)	2000
Mva1269I	GAATGC	1 cut(s)	1154
MvaI	CCWGG	5 cut(s)	750, 1788, 1815, 1893, 2165
MvnI	CGCG	2 cut(s)	992, 1657
MwoI	GCNNNNNNNGC	4 cut(s)	790, 1189, 1226, 2229
NarI	GGCGCC	1 cut(s)	1064
NciI	CCSGG	5 cut(s)	908, 1489, 1490, 2103, 2104
NdeI	CATATG	2 cut(s)	879, 1456
NlaIII	CATG	7 cut(s)	862, 1042, 1156, 1238, 1618, 2085, 2216
NlaIV	GGNNCC	8 cut(s)	329, 747, 1030, 1065, 1863, 1912, 2061, 2162
NmuCI	GTSAC	6 cut(s)	401, 458, 641, 695, 835, 2129
NsiI	ATGCAT	3 cut(s)	879, 1154, 1738
NspI	RCATGY	1 cut(s)	1238
OliI	CACNNNNGTG	4 cut(s)	1010, 1521, 2141, 2184
PaeR7I	CTCGAG	1 cut(s)	485
PaqCI	CACCTGC	1 cut(s)	2147
PauI	GCGCGC	1 cut(s)	990
PciI	ACATGT	1 cut(s)	1234
PciSI	GCTCTTC	1 cut(s)	1564
PcsI	WCGNNNNNNNCGW	2 cut(s)	1049, 1940
PctI	GAATGC	1 cut(s)	1154
PdmI	GAANNNNTTC	1 cut(s)	599
PfeI	GAWTC	5 cut(s)	61, 1475, 1876, 1993, 2240
PfoI	TCCNGGA	1 cut(s)	1786
PinAI	ACCGGT	1 cut(s)	1168
PkrI	GCNGC	7 cut(s)	714, 783, 795, 902, 1324, 1354, 1408
PleI	GAGTC	2 cut(s)	1281, 1456
PluTI	GGCGCC	1 cut(s)	1067
PpsI	GAGTC	2 cut(s)	1281, 1456
PpuMI	RGGWCCY	1 cut(s)	2161
PscI	ACATGT	1 cut(s)	1234
PshAI	GACNNNNGTC	1 cut(s)	2159
PshBI	ATTAAT	3 cut(s)	555, 630, 1928
PsiI	TTATAA	1 cut(s)	1677
Psp124BI	GAGCTC	2 cut(s)	521, 1576
Psp1406I	AACGTT	1 cut(s)	2097
Psp5II	RGGWCCY	1 cut(s)	2161
Psp6I	CCWGG	5 cut(s)	748, 1786, 1813, 1891, 2163
PspEI	GGTNACC	1 cut(s)	458
PspFI	CCCAGC	2 cut(s)	761, 803
PspGI	CCWGG	5 cut(s)	748, 1786, 1813, 1891, 2163
PspN4I	GGNNCC	8 cut(s)	329, 747, 1030, 1065, 1863, 1912, 2061, 2162
PspPI	GGNCC	8 cut(s)	883, 926, 1028, 1174, 1432, 1695, 1790, 2161
PspPPI	RGGWCCY	1 cut(s)	2161
PspXI	VCTCGAGB	1 cut(s)	485
PstNI	CAGNNNCTG	1 cut(s)	2139
PsuI	RGATCY	4 cut(s)	736, 1204, 2041, 2059
PteI	GCGCGC	1 cut(s)	990
RsaI	GTAC	2 cut(s)	1364, 2169
RsaNI	GTAC	2 cut(s)	1363, 2168
RseI	CAYNNNNRTG	6 cut(s)	1010, 1037, 1521, 2022, 2141, 2184
SacI	GAGCTC	2 cut(s)	521, 1576
SapI	GCTCTTC	1 cut(s)	1564
SaqAI	TTAA	7 cut(s)	555, 630, 732, 1622, 1746, 1851, 1928
SatI	GCNGC	7 cut(s)	713, 782, 794, 901, 1323, 1353, 1407
Sau96I	GGNCC	8 cut(s)	883, 926, 1028, 1174, 1432, 1695, 1790, 2161
SchI	GAGTC	2 cut(s)	1282, 1457
SduI	GDGCHC	5 cut(s)	521, 590, 1140, 1576, 1864
SfoI	GGCGCC	1 cut(s)	1065
Sfr274I	CTCGAG	1 cut(s)	485
SinI	GGWCC	5 cut(s)	1174, 1432, 1695, 1790, 2161
SlaI	CTCGAG	1 cut(s)	485
SmaI	CCCGGG	2 cut(s)	1490, 2104
SmiMI	CAYNNNNRTG	6 cut(s)	1010, 1037, 1521, 2022, 2141, 2184
SmlI	CTYRAG	2 cut(s)	485, 1841
SmoI	CTYRAG	2 cut(s)	485, 1841
SsiI	CCGC	6 cut(s)	65, 784, 794, 898, 901, 1017
SspDI	GGCGCC	1 cut(s)	1063
SspMI	CTAG	3 cut(s)	161, 468, 675
SstI	GAGCTC	2 cut(s)	521, 1576
StyI	CCWWGG	1 cut(s)	637
TaiI	ACGT	3 cut(s)	1046, 1133, 2100
TaqI	TCGA	6 cut(s)	486, 864, 891, 1146, 1264, 1420
TaqII	GACCGA	1 cut(s)	477
TatI	WGTACW	1 cut(s)	1362
TauI	GCSGC	2 cut(s)	796, 903
TfiI	GAWTC	5 cut(s)	61, 1475, 1876, 1993, 2240
Tru1I	TTAA	7 cut(s)	555, 630, 732, 1622, 1746, 1851, 1928
Tru9I	TTAA	7 cut(s)	555, 630, 732, 1622, 1746, 1851, 1928
TscAI	CASTG	7 cut(s)	379, 456, 595, 1012, 1030, 1831, 1862
TseFI	GTSAC	6 cut(s)	401, 458, 641, 695, 835, 2129
TseI	GCWGC	5 cut(s)	712, 781, 1322, 1352, 1406
Tsp45I	GTSAC	6 cut(s)	401, 458, 641, 695, 835, 2129
TspDTI	ATGAA	7 cut(s)	20, 168, 962, 1169, 1545, 1631, 1985
TspGWI	ACGGA	2 cut(s)	498, 1205
TspMI	CCCGGG	2 cut(s)	1488, 2102
TspRI	CASTG	7 cut(s)	379, 456, 595, 1012, 1030, 1831, 1862
VpaK11BI	GGWCC	5 cut(s)	1174, 1432, 1695, 1790, 2161
VspI	ATTAAT	3 cut(s)	555, 630, 1928
XapI	RAATTY	7 cut(s)	298, 1293, 1499, 1618, 1760, 2088, 2117
XceI	RCATGY	1 cut(s)	1238
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1954, 2035
XhoI	CTCGAG	1 cut(s)	485
XmaI	CCCGGG	2 cut(s)	1488, 2102
XmnI	GAANNNNTTC	1 cut(s)	599
XspI	CTAG	3 cut(s)	161, 468, 675
Zsp2I	ATGCAT	3 cut(s)	879, 1154, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.