Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010429

Physical Location & Seq

Genomic Coordinates Reverse (-)

32922468 .. 32927519

Gene Structure 5052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G354600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGCTTCTTCTTCCGGTTCCAGTACCAGGGTCGACTCGCTTCCCTTCCTTTCAATTGGCTTCTCCAATACTCATCCGCCACCACCACCACCACCACCATATGTTCCATTTGTGGTCTCTGTCCGCCACCACAGCCGCTGCCGTTACCAACTCATCCCAAGCCCATCTACCCCCAATTCCATCCTCAACCTCAACCTCAAACTCAAGACGGCGCTCTTTTGACGACGACCAAGCTGCCGTTTCCCGCTATGACTTCAGCCCCCTCCTCACCTTCCTCGCCGCCAAGTCAATGTCAATGTCATCTTCCGCCTCCTCCCCAACCTCACTCGACCCAGCCGAGTTCCAGCTCGCCGAGTCGTACCGGGCCGTGCCCGCCCCACTCTGGCACTCTCTCCTCAAATCTCTCTGCTCCTCCTCCTCCTCCGACATACAACTAGCCTACGCCGTCGTTTCCTGGCTCCAAAAGCACAACCTCTGCTTCTCCTACGAACTCCTCTACTCCATCCTCATCCACGCCCTCGGCCGCTCCGAGAAACTCTACGAGGCTTTCTTGCTCTCCCAGCGACAATCCTTAACACCGCTCACCTACAATGCTCTCATCGGCGCTTGTGCCCGCAATGGCGACCTCGAGAAGGCCCTCCATTTGATGTCCCGCATGCGCCAAGACGGTTATCGCTCCGACTTCGTCAATTACAGCTTGATCATTCAATCCCTCTCCCGCTCCAACAAGATTGATTCCCCCATTATGCTCAAGCTCTACCGGGAGATTGAGTCCGAGAGCATTGAGATTGATGGCCAGCTCTACAACGACATCATTGCTGGTTTCGCAAAAGCCGGTGAGCCCACGCAGGCTATGCATCTGCTCGCCATGGTCCAGGCCACTGGCTTGAGCCCCAAAACCGCCACTCTGGTTGCCCTCATCTCCGCCCTGGGGAATTGCGGTAGGGTGGTTGAAGCCGAAGCTATCTTCGAGGAGATGAAAGAAGGAGGATTGCAGCCCAGGACCAGGGCTTACAATGCCCTGCTCAAAGGCTATGTAAAGGCTGCTCAATTGAAAGACGCCGAATCCATCGTGTCTCAGATGGAGAAGAGCGGCATTTCACCCGATGAGCACACATACAGCCTGCTCATTGATGCCTATGCGAATGCGGGGAGGTGGGAAAGCGCAAGAATTGTGCTGAAAGAGATGGAAGCCAGCAATGTGCAGCCTAATTCCTATGTTTTCAGTAGGATCTTAGCGAGCTACCGTGATAGAGGAGAGTGGCAAAAGTCGTTCCAAGTATTGAGGGAGATGAAGAGCAGCGGGGTAAGACCCGACAGGCATTTTTACAATGTCATGATTGACACATTTGGAAAGTCCAACTGTCTTGATCATGTTATGGCTACCTTTGAAAGGATGCTATCCGAGGGAATTCAACCCGACACCGTCACCTGGAATACGCTTATAGATTGTCATTGCAAGTCAGGCCACCATAAAAGGGCAGAGGAATTATTTGAGGAAATGCACCAAAGTGGGTGCGCCCCTTGCGCCACCACCTATAACATCATGATAAATTCCTTTGGGGAGCAGCAGAGATGGGTTGAGGTGAAGGGCTTGTTGGGGAAGATGCAGGCTCAGGGTTTACTGCCCAACATAGTTACCTATACCACCCTAGTTGATATTTATGGAAAGTCGGGGAGATTTAATGATGCAATAGAGTGCTTGGAGGTCATGAAGTCTGCAGGCTTGAAACCATCCCCGACTATGTACAATGCCTTAATTAATGCCTATGCACAAAGAGGTTTGTCTGAGCAAGCACTGAATGCATTTAGGGTCATGAGAGCAGATGGCTTAAAACCCAGTCTCTTAGCTCTCAATTCATTAATCAATGCATTTGGTGAAGATAGAAGGGATGCTGAGGCCTTTTCTGTGTTGCAGTACATGAAGGAAAATGACCTGAAACCAGATGTAGTTACATATACTACACTTATGAAAACCCTTATCCGTGTTGATAAATTTTACAAGGTTCCAGCTGTGTATGAAGAAATGATTCTGTCTAGATGCACTCCAGATAGGAAAGCCAGGGCAATGTTGCGGTCTGCTCTGAAATACATGAAACAGACACTCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009295 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009657 GO:0009658 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010239 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031425 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0034357 GO:0034641 GO:0042644 GO:0042646 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

704

Amino Acids

78.72

Weight (kDa)

8.45

Isoelectric Point (pI)

53.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010429)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42310
fragaria_vesca	FvH4_2g37460 FvH4_2g37460 FvH4_2g37460 FvH4_5g30181
malus_domestica	MD12G1003200.v1.1 MD15G1002100.v1.1
prunus_persica	Prupe.1G354600_v2.0.a1
pyrus_communis	pycom08g00200 pycom15g00100
rosa_chinensis	RchiOBHm_Chr6g0304261
rosa_laevigata	RLG00000010997
rosa_multiflora	Rmu_co8272487.1_g000001 Rmu_ssc0000218.1_g000026
rosa_roxburghii	Rroxscaffold_7G00163900
rosa_rugosa	Rorug06G0329300
rosa_samantha	Rh6AG442900 Rh6BG459600 Rh6CG455600 Rh6DG442400
rosa_wichuraiana	Rw6G038420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	4 cut(s)	525, 580, 720, 1092
AccI	GTMKAC	1 cut(s)	32
AclWI	GGATC	1 cut(s)	1238
AcoI	YGGCCR	2 cut(s)	520, 793
AcsI	RAATTY	3 cut(s)	1410, 1552, 1994
AcuI	CTGAAG	1 cut(s)	238
AcyI	GRCGYC	1 cut(s)	1059
AfaI	GTAC	4 cut(s)	24, 359, 1748, 1919
AfiI	CCNNNNNNNGG	8 cut(s)	26, 381, 631, 930, 1005, 1392, 1431, 1477
AgsI	TTSAA	7 cut(s)	53, 707, 953, 1054, 1391, 1415, 1729
AjnI	CCWGG	8 cut(s)	25, 452, 873, 927, 998, 1004, 1430, 2060
AjuI	GAANNNNNNNTTGG	2 cut(s)	1580, 1612
AleI	CACNNNNGTG	1 cut(s)	1509
AluBI	AGCT	9 cut(s)	233, 346, 696, 754, 799, 962, 1242, 1850, 2012
AluI	AGCT	9 cut(s)	233, 346, 696, 754, 799, 962, 1242, 1850, 2012
Alw21I	GWGCWC	1 cut(s)	1113
Alw26I	GTCTC	3 cut(s)	120, 1080, 1847
AlwI	GGATC	1 cut(s)	1238
AlwNI	CAGNNNCTG	1 cut(s)	137
Ama87I	CYCGRG	1 cut(s)	626
AoxI	GGCC	7 cut(s)	363, 520, 633, 793, 876, 1465, 1899
ApeKI	GCWGC	7 cut(s)	137, 233, 994, 1043, 1204, 1299, 1567
ApoI	RAATTY	3 cut(s)	1410, 1552, 1994
AseI	ATTAAT	2 cut(s)	1761, 1862
Asp700I	GAANNNNTTC	1 cut(s)	2028
AspLEI	GCGC	6 cut(s)	213, 605, 660, 1166, 1520, 1529
AspS9I	GGNCC	4 cut(s)	363, 634, 871, 1002
AsuC2I	CCSGG	2 cut(s)	362, 761
AsuHPI	GGTGA	7 cut(s)	259, 574, 848, 1092, 1420, 1597, 1889
AvaI	CYCGRG	1 cut(s)	626
AvaII	GGWCC	2 cut(s)	871, 1002
BaeGI	GKGCMC	2 cut(s)	372, 613
BalI	TGGCCA	1 cut(s)	795
BanII	GRGCYC	2 cut(s)	843, 893
Bbv12I	GWGCWC	1 cut(s)	1113
BbvCI	CCTCAGC	1 cut(s)	1896
BbvI	GCAGC	7 cut(s)	124, 220, 1006, 1030, 1216, 1311, 1579
BceAI	ACGGC	5 cut(s)	125, 221, 224, 350, 428
BcgI	CGANNNNNNTGC	4 cut(s)	215, 249, 797, 831
BciT130I	CCWGG	8 cut(s)	27, 454, 875, 929, 1000, 1006, 1432, 2062
BclI	TGATCA	2 cut(s)	699, 1369
BcnI	CCSGG	2 cut(s)	362, 761
BcoDI	GTCTC	3 cut(s)	120, 1080, 1847
BfaI	CTAG	3 cut(s)	434, 1652, 2037
BfmI	CTRYAG	1 cut(s)	1719
BfoI	RGCGCY	2 cut(s)	214, 606
Bme18I	GGWCC	2 cut(s)	871, 1002
BmeT110I	CYCGRG	1 cut(s)	626
BmgT120I	GGNCC	4 cut(s)	363, 634, 871, 1002
BmiI	GGNNCC	3 cut(s)	18, 458, 2007
BmrI	ACTGGG	1 cut(s)	1833
BmsI	GCATC	7 cut(s)	865, 1123, 1386, 1596, 1678, 1882, 2030
BmuI	ACTGGG	1 cut(s)	1833
BpmI	CTGGAG	1 cut(s)	2031
Bpu10I	CCTNAGC	2 cut(s)	1614, 1896
BpuEI	CTTGAG	3 cut(s)	187, 734, 907
BpuMI	CCSGG	2 cut(s)	362, 761
BsaHI	GRCGYC	1 cut(s)	1059
BsaI	GGTCTC	1 cut(s)	120
BsaJI	CCNNGG	9 cut(s)	26, 517, 867, 927, 928, 998, 1005, 1404, 2061
BsaWI	WCCGGW	1 cut(s)	13
BsaXI	ACNNNNNCTCC	2 cut(s)	755, 785
Bsc4I	CCNNNNNNNGG	8 cut(s)	26, 381, 631, 930, 1005, 1392, 1431, 1477
Bse118I	RCCGGY	1 cut(s)	833
Bse1I	ACTGG	3 cut(s)	20, 886, 1839
Bse3DI	GCAATG	5 cut(s)	622, 813, 1204, 1453, 2073
BseBI	CCWGG	8 cut(s)	27, 454, 875, 929, 1000, 1006, 1432, 2062
BseDI	CCNNGG	9 cut(s)	26, 517, 867, 927, 928, 998, 1005, 1404, 2061
BseGI	GGATG	8 cut(s)	72, 152, 179, 501, 507, 1401, 1733, 1897
BseLI	CCNNNNNNNGG	8 cut(s)	26, 381, 631, 930, 1005, 1392, 1431, 1477
BseMI	GCAATG	5 cut(s)	622, 813, 1204, 1453, 2073
BseMII	CTCAG	4 cut(s)	1091, 1628, 1779, 1887
BseNI	ACTGG	3 cut(s)	20, 886, 1839
BseSI	GKGCMC	2 cut(s)	372, 613
BseX3I	CGGCCG	1 cut(s)	520
BseXI	GCAGC	7 cut(s)	124, 220, 1006, 1030, 1216, 1311, 1579
BseYI	CCCAGC	2 cut(s)	331, 558
BsgI	GTGCAG	1 cut(s)	1223
Bsh1285I	CGRYCG	1 cut(s)	523
BshFI	GGCC	7 cut(s)	365, 522, 635, 795, 878, 1467, 1901
BsiEI	CGRYCG	1 cut(s)	523
BsiHKAI	GWGCWC	1 cut(s)	1113
BsiHKCI	CYCGRG	1 cut(s)	626
BsiSI	CCGG	4 cut(s)	14, 361, 760, 834
BslFI	GGGAC	1 cut(s)	634
BslI	CCNNNNNNNGG	8 cut(s)	26, 381, 631, 930, 1005, 1392, 1431, 1477
BsmAI	GTCTC	3 cut(s)	120, 1080, 1847
BsmFI	GGGAC	1 cut(s)	634
BsmI	GAATGC	2 cut(s)	1150, 1807
BsnI	GGCC	7 cut(s)	365, 522, 635, 795, 878, 1467, 1901
Bso31I	GGTCTC	1 cut(s)	120
BsoBI	CYCGRG	1 cut(s)	626
Bsp1286I	GDGCHC	5 cut(s)	372, 613, 843, 893, 1113
Bsp1407I	TGTACA	1 cut(s)	1746
Bsp143I	GATC	3 cut(s)	699, 1230, 1369
Bsp19I	CCATGG	1 cut(s)	867
BspANI	GGCC	7 cut(s)	365, 522, 635, 795, 878, 1467, 1901
BspCNI	CTCAG	4 cut(s)	1090, 1627, 1780, 1888
BspHI	TCATGA	4 cut(s)	1335, 1545, 1710, 1815
BspLI	GGNNCC	3 cut(s)	18, 458, 2007
BspMAI	CTGCAG	1 cut(s)	1723
BspPI	GGATC	1 cut(s)	1238
BspQI	GCTCTTC	2 cut(s)	1082, 1289
BspTNI	GGTCTC	1 cut(s)	120
BsrBI	CCGCTC	4 cut(s)	525, 580, 720, 1092
BsrDI	GCAATG	5 cut(s)	622, 813, 1204, 1453, 2073
BsrFI	RCCGGY	1 cut(s)	833
BsrGI	TGTACA	1 cut(s)	1746
BsrI	ACTGG	3 cut(s)	20, 886, 1839
BssAI	RCCGGY	1 cut(s)	833
BssECI	CCNNGG	9 cut(s)	26, 517, 867, 927, 928, 998, 1005, 1404, 2061
BssMI	GATC	3 cut(s)	699, 1230, 1369
BssNI	GRCGYC	1 cut(s)	1059
BssT1I	CCWWGG	1 cut(s)	867
Bst2UI	CCWGG	8 cut(s)	27, 454, 875, 929, 1000, 1006, 1432, 2062
Bst4CI	ACNGT	4 cut(s)	668, 1247, 1364, 1426
Bst6I	CTCTTC	2 cut(s)	1082, 1289
BstACI	GRCGYC	1 cut(s)	1059
BstAPI	GCANNNNNTGC	2 cut(s)	853, 1802
BstAUI	TGTACA	1 cut(s)	1746
BstDEI	CTNAG	7 cut(s)	1077, 1234, 1614, 1788, 1846, 1896, 2105
BstDSI	CCRYGG	1 cut(s)	867
BstENI	CCTNNNNNAGG	2 cut(s)	629, 1390
BstF5I	GGATG	8 cut(s)	72, 152, 179, 501, 507, 1401, 1733, 1897
BstH2I	RGCGCY	2 cut(s)	214, 606
BstHHI	GCGC	6 cut(s)	213, 605, 660, 1166, 1520, 1529
BstKTI	GATC	3 cut(s)	702, 1233, 1372
BstMAI	GTCTC	3 cut(s)	120, 1080, 1847
BstMBI	GATC	3 cut(s)	699, 1230, 1369
BstMCI	CGRYCG	1 cut(s)	523
BstNI	CCWGG	8 cut(s)	27, 454, 875, 929, 1000, 1006, 1432, 2062
BstNSI	RCATGY	1 cut(s)	658
BstSFI	CTRYAG	1 cut(s)	1719
BstSLI	GKGCMC	2 cut(s)	372, 613
BstV1I	GCAGC	7 cut(s)	124, 220, 1006, 1030, 1216, 1311, 1579
BstX2I	RGATCY	1 cut(s)	1230
BstXI	CCANNNNNNTGG	1 cut(s)	881
BstYI	RGATCY	1 cut(s)	1230
BstZI	CGGCCG	1 cut(s)	520
BsuRI	GGCC	7 cut(s)	365, 522, 635, 795, 878, 1467, 1901
BtgI	CCRYGG	1 cut(s)	867
BtsCI	GGATG	8 cut(s)	72, 152, 179, 501, 507, 1401, 1733, 1897
BtsIMutI	CAGTG	2 cut(s)	879, 1796
CaiI	CAGNNNCTG	1 cut(s)	137
CciI	TCATGA	4 cut(s)	1335, 1545, 1710, 1815
CfoI	GCGC	6 cut(s)	213, 605, 660, 1166, 1520, 1529
Cfr10I	RCCGGY	1 cut(s)	833
Cfr13I	GGNCC	4 cut(s)	363, 634, 871, 1002
CseI	GACGC	1 cut(s)	1067
Csp6I	GTAC	4 cut(s)	23, 358, 1747, 1918
CspCI	CAANNNNNGTGG	4 cut(s)	892, 927, 1636, 1671
CviAII	CATG	9 cut(s)	655, 868, 1336, 1373, 1546, 1711, 1816, 1921, 2092
CviQI	GTAC	4 cut(s)	23, 358, 1747, 1918
DdeI	CTNAG	7 cut(s)	1077, 1234, 1614, 1788, 1846, 1896, 2105
DpnI	GATC	3 cut(s)	701, 1232, 1371
DpnII	GATC	3 cut(s)	699, 1230, 1369
EaeI	YGGCCR	2 cut(s)	520, 793
EagI	CGGCCG	1 cut(s)	520
Eam1104I	CTCTTC	2 cut(s)	1082, 1289
EarI	CTCTTC	2 cut(s)	1082, 1289
EciI	GGCGGA	4 cut(s)	65, 112, 295, 913
EclXI	CGGCCG	1 cut(s)	520
Eco130I	CCWWGG	1 cut(s)	867
Eco147I	AGGCCT	1 cut(s)	1901
Eco24I	GRGCYC	2 cut(s)	843, 893
Eco31I	GGTCTC	1 cut(s)	120
Eco47I	GGWCC	2 cut(s)	871, 1002
Eco52I	CGGCCG	1 cut(s)	520
Eco57I	CTGAAG	1 cut(s)	238
Eco88I	CYCGRG	1 cut(s)	626
EcoNI	CCTNNNNNAGG	2 cut(s)	629, 1390
EcoO109I	RGGNCCY	1 cut(s)	634
EcoRI	GAATTC	1 cut(s)	1410
EcoRII	CCWGG	8 cut(s)	25, 452, 873, 927, 998, 1004, 1430, 2060
EcoT14I	CCWWGG	1 cut(s)	867
EcoT22I	ATGCAT	3 cut(s)	858, 1807, 1873
EcoT38I	GRGCYC	2 cut(s)	843, 893
ErhI	CCWWGG	1 cut(s)	867
FaeI	CATG	9 cut(s)	658, 871, 1339, 1376, 1549, 1714, 1819, 1924, 2095
FaqI	GGGAC	1 cut(s)	634
FatI	CATG	9 cut(s)	654, 867, 1335, 1372, 1545, 1710, 1815, 1920, 2091
FauI	CCCGC	7 cut(s)	251, 379, 620, 659, 725, 1141, 1295
FauNDI	CATATG	1 cut(s)	99
FbaI	TGATCA	2 cut(s)	699, 1369
FblI	GTMKAC	1 cut(s)	32
FokI	GGATG	8 cut(s)	59, 139, 166, 488, 494, 1408, 1720, 1904
FriOI	GRGCYC	2 cut(s)	843, 893
FspBI	CTAG	3 cut(s)	434, 1652, 2037
GlaI	GCGC	6 cut(s)	212, 604, 659, 1165, 1519, 1528
GsaI	CCCAGC	2 cut(s)	335, 562
GsuI	CTGGAG	1 cut(s)	2031
HaeII	RGCGCY	2 cut(s)	214, 606
HaeIII	GGCC	7 cut(s)	365, 522, 635, 795, 878, 1467, 1901
HapII	CCGG	4 cut(s)	14, 361, 760, 834
HgaI	GACGC	1 cut(s)	1067
HhaI	GCGC	6 cut(s)	213, 605, 660, 1166, 1520, 1529
Hin1I	GRCGYC	1 cut(s)	1059
Hin1II	CATG	9 cut(s)	658, 871, 1339, 1376, 1549, 1714, 1819, 1924, 2095
Hin6I	GCGC	6 cut(s)	211, 603, 658, 1164, 1518, 1527
HinP1I	GCGC	6 cut(s)	211, 603, 658, 1164, 1518, 1527
HincII	GTYRAC	1 cut(s)	33
HindII	GTYRAC	1 cut(s)	33
HinfI	GANTC	6 cut(s)	34, 353, 734, 770, 1064, 2029
HpaII	CCGG	4 cut(s)	14, 361, 760, 834
HphI	GGTGA	7 cut(s)	259, 574, 848, 1092, 1420, 1597, 1889
Hpy166II	GTNNAC	2 cut(s)	33, 1622
Hpy188I	TCNGA	9 cut(s)	424, 529, 679, 775, 1080, 1405, 1789, 2085, 2108
Hpy188III	TCNNGA	9 cut(s)	204, 628, 1336, 1367, 1546, 1711, 1816, 2037, 2048
Hpy8I	GTNNAC	2 cut(s)	33, 1622
Hpy99I	CGWCG	2 cut(s)	227, 449
HpyAV	CCTTC	7 cut(s)	54, 280, 625, 977, 1582, 1881, 1918
HpyCH4III	ACNGT	4 cut(s)	668, 1247, 1364, 1426
HpyF3I	CTNAG	7 cut(s)	1077, 1234, 1614, 1788, 1846, 1896, 2105
Hsp92I	GRCGYC	1 cut(s)	1059
Hsp92II	CATG	9 cut(s)	658, 871, 1339, 1376, 1549, 1714, 1819, 1924, 2095
HspAI	GCGC	6 cut(s)	211, 603, 658, 1164, 1518, 1527
Ksp22I	TGATCA	2 cut(s)	699, 1369
Kzo9I	GATC	3 cut(s)	699, 1230, 1369
LguI	GCTCTTC	2 cut(s)	1082, 1289
LmnI	GCTCC	6 cut(s)	413, 462, 530, 680, 725, 1564
Lsp1109I	GCAGC	7 cut(s)	124, 220, 1006, 1030, 1216, 1311, 1579
LweI	GCATC	7 cut(s)	865, 1123, 1386, 1596, 1678, 1882, 2030
MaeI	CTAG	3 cut(s)	434, 1652, 2037
MaeIII	GTNAC	4 cut(s)	142, 1426, 1636, 1951
MalI	GATC	3 cut(s)	701, 1232, 1371
MbiI	CCGCTC	4 cut(s)	525, 580, 720, 1092
MboI	GATC	3 cut(s)	699, 1230, 1369
MboII	GAAGA	7 cut(s)	294, 958, 1099, 1306, 1615, 1892, 2033
MfeI	CAATTG	2 cut(s)	53, 1049
MflI	RGATCY	1 cut(s)	1230
MhlI	GDGCHC	5 cut(s)	372, 613, 843, 893, 1113
MlsI	TGGCCA	1 cut(s)	795
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	3 cut(s)	28, 362, 779
MmeI	TCCRAC	4 cut(s)	447, 702, 747, 1383
Mox20I	TGGCCA	1 cut(s)	795
Mph1103I	ATGCAT	3 cut(s)	858, 1807, 1873
MroXI	GAANNNNTTC	1 cut(s)	2028
MscI	TGGCCA	1 cut(s)	795
MseI	TTAA	6 cut(s)	572, 1683, 1757, 1761, 1832, 1862
MslI	CAYNNNNRTG	2 cut(s)	1509, 2107
Msp20I	TGGCCA	1 cut(s)	795
MspA1I	CMGCKG	3 cut(s)	137, 1302, 2012
MspI	CCGG	4 cut(s)	14, 361, 760, 834
MunI	CAATTG	2 cut(s)	53, 1049
Mva1269I	GAATGC	2 cut(s)	1150, 1807
MvaI	CCWGG	8 cut(s)	27, 454, 875, 929, 1000, 1006, 1432, 2062
NciI	CCSGG	2 cut(s)	362, 761
NcoI	CCATGG	1 cut(s)	867
NdeI	CATATG	1 cut(s)	99
NdeII	GATC	3 cut(s)	699, 1230, 1369
NlaIII	CATG	9 cut(s)	658, 871, 1339, 1376, 1549, 1714, 1819, 1924, 2095
NlaIV	GGNNCC	3 cut(s)	18, 458, 2007
NmeAIII	GCCGAG	3 cut(s)	361, 376, 498
NmuCI	GTSAC	1 cut(s)	1426
NsiI	ATGCAT	3 cut(s)	858, 1807, 1873
NspI	RCATGY	1 cut(s)	658
OliI	CACNNNNGTG	1 cut(s)	1509
PacI	TTAATTAA	1 cut(s)	1761
PaeI	GCATGC	1 cut(s)	658
PaeR7I	CTCGAG	1 cut(s)	626
PagI	TCATGA	4 cut(s)	1335, 1545, 1710, 1815
PasI	CCCWGGG	1 cut(s)	928
PceI	AGGCCT	1 cut(s)	1901
PciSI	GCTCTTC	2 cut(s)	1082, 1289
PcsI	WCGNNNNNNNCGW	2 cut(s)	333, 525
PctI	GAATGC	2 cut(s)	1150, 1807
PdmI	GAANNNNTTC	1 cut(s)	2028
PfeI	GAWTC	3 cut(s)	734, 1064, 2029
PflFI	GACNNNGTC	2 cut(s)	683, 1424
PleI	GAGTC	3 cut(s)	28, 361, 778
PpsI	GAGTC	3 cut(s)	28, 361, 778
PshBI	ATTAAT	2 cut(s)	1761, 1862
Psp6I	CCWGG	8 cut(s)	25, 452, 873, 927, 998, 1004, 1430, 2060
PspFI	CCCAGC	2 cut(s)	331, 558
PspGI	CCWGG	8 cut(s)	25, 452, 873, 927, 998, 1004, 1430, 2060
PspN4I	GGNNCC	3 cut(s)	18, 458, 2007
PspPI	GGNCC	4 cut(s)	363, 634, 871, 1002
PstI	CTGCAG	1 cut(s)	1723
PstNI	CAGNNNCTG	1 cut(s)	137
PsuI	RGATCY	1 cut(s)	1230
PsyI	GACNNNGTC	2 cut(s)	683, 1424
PvuII	CAGCTG	1 cut(s)	2012
RsaI	GTAC	4 cut(s)	24, 359, 1748, 1919
RsaNI	GTAC	4 cut(s)	23, 358, 1747, 1918
RseI	CAYNNNNRTG	2 cut(s)	1509, 2107
SalI	GTCGAC	1 cut(s)	31
SapI	GCTCTTC	2 cut(s)	1082, 1289
SaqAI	TTAA	6 cut(s)	572, 1683, 1757, 1761, 1832, 1862
Sau3AI	GATC	3 cut(s)	699, 1230, 1369
Sau96I	GGNCC	4 cut(s)	363, 634, 871, 1002
SchI	GAGTC	3 cut(s)	28, 362, 779
SduI	GDGCHC	5 cut(s)	372, 613, 843, 893, 1113
SfaNI	GCATC	7 cut(s)	865, 1123, 1386, 1596, 1678, 1882, 2030
SfcI	CTRYAG	1 cut(s)	1719
Sfr274I	CTCGAG	1 cut(s)	626
SinI	GGWCC	2 cut(s)	871, 1002
SlaI	CTCGAG	1 cut(s)	626
SmiMI	CAYNNNNRTG	2 cut(s)	1509, 2107
SmlI	CTYRAG	4 cut(s)	202, 626, 749, 886
SmoI	CTYRAG	4 cut(s)	202, 626, 749, 886
SphI	GCATGC	1 cut(s)	658
SseBI	AGGCCT	1 cut(s)	1901
SspMI	CTAG	3 cut(s)	434, 1652, 2037
StuI	AGGCCT	1 cut(s)	1901
StyI	CCWWGG	1 cut(s)	867
TaaI	ACNGT	4 cut(s)	668, 1247, 1364, 1426
TaqI	TCGA	4 cut(s)	32, 327, 627, 969
TatI	WGTACW	2 cut(s)	1746, 1917
TauI	GCSGC	4 cut(s)	137, 281, 525, 1095
TfiI	GAWTC	3 cut(s)	734, 1064, 2029
Tru1I	TTAA	6 cut(s)	572, 1683, 1757, 1761, 1832, 1862
Tru9I	TTAA	6 cut(s)	572, 1683, 1757, 1761, 1832, 1862
TscAI	CASTG	2 cut(s)	886, 1803
TseFI	GTSAC	1 cut(s)	1426
TseI	GCWGC	7 cut(s)	137, 233, 994, 1043, 1204, 1299, 1567
Tsp45I	GTSAC	1 cut(s)	1426
TspDTI	ATGAA	8 cut(s)	992, 1307, 1727, 1848, 1937, 1985, 2034, 2108
TspGWI	ACGGA	1 cut(s)	1973
TspRI	CASTG	2 cut(s)	886, 1803
Tth111I	GACNNNGTC	2 cut(s)	683, 1424
VpaK11BI	GGWCC	2 cut(s)	871, 1002
VspI	ATTAAT	2 cut(s)	1761, 1862
XagI	CCTNNNNNAGG	2 cut(s)	629, 1390
XapI	RAATTY	3 cut(s)	1410, 1552, 1994
XbaI	TCTAGA	1 cut(s)	2036
XceI	RCATGY	1 cut(s)	658
XhoI	CTCGAG	1 cut(s)	626
XmiI	GTMKAC	1 cut(s)	32
XmnI	GAANNNNTTC	1 cut(s)	2028
XspI	CTAG	3 cut(s)	434, 1652, 2037
Zsp2I	ATGCAT	3 cut(s)	858, 1807, 1873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.