Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003844

Physical Location & Seq

Genomic Coordinates Reverse (-)

33155371 .. 33156265

Gene Structure 895 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G358500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 666 bp

ATGGCGACTACTCCGGTGAAGGTGTACGGACCACCCATATCAACAGCCGTGTCAAGAGTGTTGGCCTGTCTCCTGGAGAAAGGCGTTGATTATCAGCTCATTTCTGTCAACATGTCCAAAGGCGAGCACAAGAAGCCTGACTATCTCAAGATCCAGCCGTTTGGACAAGTGCCGGCTTTTCAAGACGAGGACATCTCCCTCTTTGAATCCAGAGCCATATGCCGGTACATATGTGACAAGTACGCGGATCGGGGAAACAAGGGGTTGTACGGAACGAATCCATTGGCAAAAGCCTCTATAGATCAGTGGCTGGAAGCAGAAGGTCAAAGCTTCAGCCCTCCAAGCTCAACTCTGGTGTTTCAGCTCGCATTCGCACCAAGAATGAAGCTGAAGCAAGACCAGGGAGTGATAAGGCAGAATGAAGAAAAACTGAAGAAGGTGCTGGACGTGTACGAAAAGAGGCTCGGGGAGAGCCGGTTCTTGGCCGGAGATGAATTCTCACTGGCCGATCTGTCCCACTTGCCCAACGGGCACTACTTGGTGAATGCCACGGACAGGGGAGAGCTGTTTACTTCTAGAAACAATGTGGGGAGGTGGTGGACTGAGATTTCGACACGAGACTCGTGGGAGAAGGTGGTCGAGATGCAGAAGCCTACTGCAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009636 GO:0009651 GO:0009941 GO:0009987 GO:0010319 GO:0016020 GO:0016740 GO:0016765 GO:0019748 GO:0031090 GO:0031967 GO:0031975 GO:0033218 GO:0034641 GO:0042221 GO:0042277 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048037 GO:0050896 GO:0051186 GO:0051704 GO:0051707 GO:0071704 GO:0072341 GO:0080167 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:1900750 GO:1901564 GO:1901681

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N

Protein Analysis

222

Amino Acids

24.96

Weight (kDa)

7.67

Isoelectric Point (pI)

37.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003844)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07860 AT3G07860 AT3G07860
malus_domestica	MD08G1006500.v1.1 MD08G1006600.v1.1
prunus_persica	Prupe.1G358400_v2.0.a1 Prupe.1G358400_v2.0.a1 Prupe.1G358400_v2.0.a1 Prupe.1G358400_v2.0.a1 Prupe.1G358400_v2.0.a1 Prupe.1G358400_v2.0.a1 Prupe.1G358500_v2.0.a1
pyrus_communis	pycom08g00500 pycom08g00510 pycom15g00430
rosa_chinensis	RchiOBHm_Chr6g0303771 RchiOBHm_Chr6g0303781
rosa_laevigata	RLG00000011044 RLG00000011045
rosa_multiflora	Rmu_co8472743.1_g000001 Rmu_sc0012878.1_g000005
rosa_roxburghii	Rroxscaffold_7G00164410 Rroxscaffold_7G00164420
rosa_rugosa	Rorug06G0324700 Rorug06G0324700
rosa_samantha	Rh6AG439000 Rh6AG439100 Rh6BG463900 Rh6BG464000 Rh6CG451300 Rh6CG451400 Rh6DG438200 Rh6DG438300
rosa_wichuraiana	Rw6G038010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	245
AciI	CCGC	1 cut(s)	245
AclWI	GGATC	2 cut(s)	145, 255
AcoI	YGGCCR	2 cut(s)	483, 504
AcsI	RAATTY	1 cut(s)	494
AcuI	CTGAAG	3 cut(s)	316, 410, 452
AfaI	GTAC	5 cut(s)	26, 227, 242, 269, 452
AfiI	CCNNNNNNNGG	3 cut(s)	222, 481, 555
AflIII	ACRYGT	2 cut(s)	111, 447
AgsI	TTSAA	2 cut(s)	182, 206
AjiI	CACGTC	1 cut(s)	448
AjnI	CCWGG	2 cut(s)	72, 399
AloI	GAACNNNNNNTCC	2 cut(s)	461, 493
AluBI	AGCT	6 cut(s)	97, 330, 345, 364, 388, 565
AluI	AGCT	6 cut(s)	97, 330, 345, 364, 388, 565
Alw21I	GWGCWC	1 cut(s)	129
Alw26I	GTCTC	2 cut(s)	74, 612
AlwI	GGATC	2 cut(s)	145, 255
AlwNI	CAGNNNCTG	1 cut(s)	310
Ama87I	CYCGRG	1 cut(s)	464
AoxI	GGCC	3 cut(s)	63, 483, 504
ApoI	RAATTY	1 cut(s)	494
ArsI	GACNNNNNNTTYG	2 cut(s)	592, 624
AspS9I	GGNCC	1 cut(s)	29
AsuHPI	GGTGA	2 cut(s)	28, 553
AvaI	CYCGRG	1 cut(s)	464
AvaII	GGWCC	1 cut(s)	29
BaeGI	GKGCMC	1 cut(s)	534
BaeI	ACNNNNGTAYC	2 cut(s)	217, 250
BauI	CACGAG	2 cut(s)	615, 622
Bbv12I	GWGCWC	1 cut(s)	129
BceAI	ACGGC	2 cut(s)	32, 142
BciT130I	CCWGG	2 cut(s)	74, 401
BcoDI	GTCTC	2 cut(s)	74, 612
BfaI	CTAG	1 cut(s)	576
BfmI	CTRYAG	1 cut(s)	297
BglI	GCCNNNNNGGC	1 cut(s)	529
Bme1390I	CCNGG	2 cut(s)	74, 401
Bme18I	GGWCC	1 cut(s)	29
BmeT110I	CYCGRG	1 cut(s)	464
BmgBI	CACGTC	1 cut(s)	448
BmgT120I	GGNCC	1 cut(s)	29
BmrFI	CCNGG	2 cut(s)	74, 401
BmsI	GCATC	1 cut(s)	633
BplI	GAGNNNNNCTC	2 cut(s)	179, 211
BpmI	CTGGAG	1 cut(s)	95
BpuEI	CTTGAG	1 cut(s)	131
BsaJI	CCNNGG	2 cut(s)	400, 549
BsaWI	WCCGGW	1 cut(s)	13
BsaXI	ACNNNNNCTCC	2 cut(s)	461, 491
Bsc4I	CCNNNNNNNGG	3 cut(s)	222, 481, 555
Bse118I	RCCGGY	3 cut(s)	172, 222, 474
Bse1I	ACTGG	1 cut(s)	507
BseBI	CCWGG	2 cut(s)	74, 401
BseDI	CCNNGG	2 cut(s)	400, 549
BseLI	CCNNNNNNNGG	3 cut(s)	222, 481, 555
BseMII	CTCAG	1 cut(s)	594
BseNI	ACTGG	1 cut(s)	507
BseSI	GKGCMC	1 cut(s)	534
Bsh1236I	CGCG	1 cut(s)	245
BshFI	GGCC	3 cut(s)	65, 485, 506
BsiHKAI	GWGCWC	1 cut(s)	129
BsiHKCI	CYCGRG	1 cut(s)	464
BsiSI	CCGG	5 cut(s)	14, 173, 223, 475, 486
BslFI	GGGAC	1 cut(s)	499
BslI	CCNNNNNNNGG	3 cut(s)	222, 481, 555
BsmAI	GTCTC	2 cut(s)	74, 612
BsmFI	GGGAC	1 cut(s)	499
BsmI	GAATGC	2 cut(s)	368, 550
BsnI	GGCC	3 cut(s)	65, 485, 506
BsoBI	CYCGRG	1 cut(s)	464
Bsp1286I	GDGCHC	2 cut(s)	129, 534
Bsp143I	GATC	4 cut(s)	150, 247, 301, 508
BspACI	CCGC	1 cut(s)	245
BspANI	GGCC	3 cut(s)	65, 485, 506
BspCNI	CTCAG	1 cut(s)	595
BspFNI	CGCG	1 cut(s)	245
BspPI	GGATC	2 cut(s)	145, 255
BsrFI	RCCGGY	3 cut(s)	172, 222, 474
BsrI	ACTGG	1 cut(s)	507
BssAI	RCCGGY	3 cut(s)	172, 222, 474
BssECI	CCNNGG	2 cut(s)	400, 549
BssMI	GATC	4 cut(s)	150, 247, 301, 508
BssSI	CACGAG	2 cut(s)	615, 622
Bst2BI	CACGAG	2 cut(s)	615, 622
Bst2UI	CCWGG	2 cut(s)	74, 401
BstC8I	GCNNGC	3 cut(s)	125, 174, 366
BstDEI	CTNAG	1 cut(s)	603
BstDSI	CCRYGG	1 cut(s)	549
BstFNI	CGCG	1 cut(s)	245
BstKTI	GATC	4 cut(s)	153, 250, 304, 511
BstMAI	GTCTC	2 cut(s)	74, 612
BstMBI	GATC	4 cut(s)	150, 247, 301, 508
BstMWI	GCNNNNNNNGC	3 cut(s)	133, 342, 529
BstNI	CCWGG	2 cut(s)	74, 401
BstNSI	RCATGY	1 cut(s)	115
BstSCI	CCNGG	2 cut(s)	72, 399
BstSFI	CTRYAG	1 cut(s)	297
BstSLI	GKGCMC	1 cut(s)	534
BstUI	CGCG	1 cut(s)	245
BstX2I	RGATCY	1 cut(s)	150
BstXI	CCANNNNNNTGG	1 cut(s)	161
BstYI	RGATCY	1 cut(s)	150
BsuRI	GGCC	3 cut(s)	65, 485, 506
BtgI	CCRYGG	1 cut(s)	549
BtrI	CACGTC	1 cut(s)	448
BtsIMutI	CAGTG	2 cut(s)	311, 500
Cac8I	GCNNGC	3 cut(s)	125, 174, 366
CaiI	CAGNNNCTG	1 cut(s)	310
Cfr10I	RCCGGY	3 cut(s)	172, 222, 474
Cfr13I	GGNCC	1 cut(s)	29
Csp6I	GTAC	5 cut(s)	25, 226, 241, 268, 451
CviAII	CATG	1 cut(s)	112
CviQI	GTAC	5 cut(s)	25, 226, 241, 268, 451
DdeI	CTNAG	1 cut(s)	603
DpnI	GATC	4 cut(s)	152, 249, 303, 510
DpnII	GATC	4 cut(s)	150, 247, 301, 508
EaeI	YGGCCR	2 cut(s)	483, 504
Eco47I	GGWCC	1 cut(s)	29
Eco57I	CTGAAG	3 cut(s)	316, 410, 452
Eco88I	CYCGRG	1 cut(s)	464
EcoRI	GAATTC	1 cut(s)	494
EcoRII	CCWGG	2 cut(s)	72, 399
FaeI	CATG	1 cut(s)	115
FaiI	YATR	7 cut(s)	38, 113, 218, 220, 230, 232, 299
FaqI	GGGAC	1 cut(s)	499
FatI	CATG	1 cut(s)	111
FauNDI	CATATG	2 cut(s)	218, 230
FspBI	CTAG	1 cut(s)	576
GsuI	CTGGAG	1 cut(s)	95
HaeIII	GGCC	3 cut(s)	65, 485, 506
HapII	CCGG	5 cut(s)	14, 173, 223, 475, 486
Hin1II	CATG	1 cut(s)	115
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HindIII	AAGCTT	1 cut(s)	328
HinfI	GANTC	3 cut(s)	206, 277, 620
HpaII	CCGG	5 cut(s)	14, 173, 223, 475, 486
HphI	GGTGA	2 cut(s)	28, 553
Hpy166II	GTNNAC	5 cut(s)	25, 109, 451, 570, 600
Hpy188III	TCNNGA	6 cut(s)	54, 148, 182, 210, 576, 640
Hpy8I	GTNNAC	5 cut(s)	25, 109, 451, 570, 600
HpyAV	CCTTC	4 cut(s)	13, 314, 430, 625
HpyCH4IV	ACGT	1 cut(s)	447
HpyCH4V	TGCA	2 cut(s)	646, 659
HpyF10VI	GCNNNNNNNGC	3 cut(s)	133, 342, 529
HpyF3I	CTNAG	1 cut(s)	603
HpySE526I	ACGT	1 cut(s)	447
Hsp92II	CATG	1 cut(s)	115
KroI	GCCGGC	1 cut(s)	172
KroNI	GCCGGC	1 cut(s)	174
Kzo9I	GATC	4 cut(s)	150, 247, 301, 508
LweI	GCATC	1 cut(s)	633
MaeI	CTAG	1 cut(s)	576
MaeII	ACGT	1 cut(s)	447
MaeIII	GTNAC	1 cut(s)	233
MalI	GATC	4 cut(s)	152, 249, 303, 510
MboI	GATC	4 cut(s)	150, 247, 301, 508
MboII	GAAGA	2 cut(s)	434, 445
MflI	RGATCY	1 cut(s)	150
MhlI	GDGCHC	2 cut(s)	129, 534
MluCI	AATT	2 cut(s)	494, 661
MlyI	GAGTC	1 cut(s)	614
MnlI	CCTC	6 cut(s)	181, 209, 304, 348, 453, 585
MroNI	GCCGGC	1 cut(s)	172
MspI	CCGG	5 cut(s)	14, 173, 223, 475, 486
MspR9I	CCNGG	2 cut(s)	74, 401
Mva1269I	GAATGC	2 cut(s)	368, 550
MvaI	CCWGG	2 cut(s)	74, 401
MvnI	CGCG	1 cut(s)	245
MwoI	GCNNNNNNNGC	3 cut(s)	133, 342, 529
NaeI	GCCGGC	1 cut(s)	174
NdeI	CATATG	2 cut(s)	218, 230
NdeII	GATC	4 cut(s)	150, 247, 301, 508
NgoMIV	GCCGGC	1 cut(s)	172
NlaIII	CATG	1 cut(s)	115
NmuCI	GTSAC	1 cut(s)	233
NspI	RCATGY	1 cut(s)	115
PciI	ACATGT	1 cut(s)	111
PctI	GAATGC	2 cut(s)	368, 550
PdiI	GCCGGC	1 cut(s)	174
PfeI	GAWTC	2 cut(s)	206, 277
PfoI	TCCNGGA	1 cut(s)	72
PleI	GAGTC	1 cut(s)	614
PpsI	GAGTC	1 cut(s)	614
PscI	ACATGT	1 cut(s)	111
Psp6I	CCWGG	2 cut(s)	72, 399
PspGI	CCWGG	2 cut(s)	72, 399
PspPI	GGNCC	1 cut(s)	29
PstNI	CAGNNNCTG	1 cut(s)	310
PsuI	RGATCY	1 cut(s)	150
RsaI	GTAC	5 cut(s)	26, 227, 242, 269, 452
RsaNI	GTAC	5 cut(s)	25, 226, 241, 268, 451
Sau3AI	GATC	4 cut(s)	150, 247, 301, 508
Sau96I	GGNCC	1 cut(s)	29
SchI	GAGTC	1 cut(s)	614
ScrFI	CCNGG	2 cut(s)	74, 401
SduI	GDGCHC	2 cut(s)	129, 534
SfaNI	GCATC	1 cut(s)	633
SfcI	CTRYAG	1 cut(s)	297
SinI	GGWCC	1 cut(s)	29
SmlI	CTYRAG	1 cut(s)	146
SmoI	CTYRAG	1 cut(s)	146
Sse9I	AATT	2 cut(s)	494, 661
SsiI	CCGC	1 cut(s)	245
SspMI	CTAG	1 cut(s)	576
StyD4I	CCNGG	2 cut(s)	72, 399
TaiI	ACGT	1 cut(s)	450
TaqI	TCGA	2 cut(s)	611, 639
TasI	AATT	2 cut(s)	494, 661
TfiI	GAWTC	2 cut(s)	206, 277
TscAI	CASTG	2 cut(s)	311, 507
TseFI	GTSAC	1 cut(s)	233
Tsp45I	GTSAC	1 cut(s)	233
TspDTI	ATGAA	3 cut(s)	398, 435, 507
TspGWI	ACGGA	3 cut(s)	42, 285, 566
TspRI	CASTG	2 cut(s)	311, 507
VpaK11BI	GGWCC	1 cut(s)	29
XapI	RAATTY	1 cut(s)	494
XbaI	TCTAGA	1 cut(s)	575
XceI	RCATGY	1 cut(s)	115
XspI	CTAG	1 cut(s)	576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.