Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006511

Physical Location & Seq

Genomic Coordinates Reverse (-)

33475414 .. 33478305

Gene Structure 2892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G364200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGGCTCCATTAGCATCATTGTTGGTGTCCCTGTTAACCATACTTGGGCTATTCACATCAGGAGTTCTTTCAACCACATTCACAATGGTGAACAAGTGCGAGTACACAGTTTGGCCGGGCATTCTCACCAACGCCGGCGTGCCTCCCCTTCCGACCACCGGCTTTGCTCTCCAAAAGGGCGAGACCAAGACCATCTCTGCTCCAACCTCCTGGGGCGGCCGCTTCTGGGGCCGAACCCTCTGCTCCCAAGACTCCACCGGCAAATTCTCCTGCGTCACAGGCGATTGCGGCTCCGGCAAAGTAGAATGCGCCGGTAACGGCGCTGCCCCGCCCGCCACTCTCGCTGAGTTCACCCTCGACGGCTCCGGCGGCCTCGATTTCTTTGACGTCAGCCTCGTCGACGGTTACAACCTCCCTATGTTGGTGGTCCCACAGGGCGGCAGTGGGACCAACTGTTCGAACACCGGCTGCGTGGTCGATCTCAACGGCCTTTGCCCTTCCGAGCTCAAGGTCACCAGCGCCGACGGCAGAGAAGGCGTGGCCTGCAAGAGCGCGTGCGAGGCGTTTCAACAGCCGCAGTACTGTTGCAGCGGCGCGTATGGTACACCGGACACTTGCAAGCCGTCATCCTACTCTCAGATATTCAAGAACGCTTGTCCACATGCTTACAGTTACGCATACGACGATAGGACCAGCACCTTCACATGTGCTGCTGCGGATTACACCATCACTTTCTGCCCCTCGCCTAGCACCAGCAAGAAAGCGTCTCAGGGACAGAACACACAGCCACAGCCTACAAATACTACTACAGGTACAGGTACACCGTCGTCTACAAGCAGCTCACCGGAGCCGATAAACAACACAATGGAATACGAAGGTGCCTCGTACGATCAAAGCGAAGCATCGTCGTCCACGCGTACTACATCACATGCAATTGCGGGTTTGGTTACCGTCGCGCTGGCCATTCAGCTGCTGTCGCAGCTCTTCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thaumatin

Protein Analysis

331

Amino Acids

34.23

Weight (kDa)

4.73

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20030 AT1G20030 AT1G75800
fragaria_vesca	FvH4_2g38320 FvH4_2g38320 FvH4_2g38320
malus_domestica	MD08G1011700.v1.1 MD08G1011900.v1.1
prunus_persica	Prupe.1G364200_v2.0.a1 Prupe.1G364200_v2.0.a1
pyrus_communis	pycom08g01010 pycom08g01030 pycom15g00980
rosa_chinensis	RchiOBHm_Chr6g0303041 RchiOBHm_Chr7g0185921
rosa_laevigata	RLG00000011113
rosa_multiflora	Rmu_sc0005665.1_g000025 Rmu_sc0018020.1_g000001 Rmu_sc0023426.1_g000001
rosa_rugosa	Rorug06G0319000.1
rosa_samantha	Rh6AG432500 Rh6BG470100 Rh6CG444900 Rh6DG431600 Rh7DG077000
rosa_wichuraiana	Rw6G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	390
AccB1I	GGYRCC	1 cut(s)	878
AccI	GTMKAC	2 cut(s)	399, 830
AccII	CGCG	4 cut(s)	554, 596, 916, 956
AcoI	YGGCCR	3 cut(s)	113, 217, 960
AcsI	RAATTY	1 cut(s)	263
AcyI	GRCGYC	1 cut(s)	387
AfaI	GTAC	7 cut(s)	104, 581, 604, 814, 820, 887, 919
AfiI	CCNNNNNNNGG	5 cut(s)	45, 158, 226, 421, 437
AflIII	ACRYGT	2 cut(s)	704, 914
AgsI	TTSAA	3 cut(s)	72, 569, 646
AjnI	CCWGG	1 cut(s)	209
AleI	CACNNNNGTG	1 cut(s)	86
AloI	GAACNNNNNNTCC	2 cut(s)	439, 471
AluBI	AGCT	4 cut(s)	505, 840, 970, 982
AluI	AGCT	4 cut(s)	505, 840, 970, 982
Alw21I	GWGCWC	1 cut(s)	507
Alw26I	GTCTC	2 cut(s)	176, 771
AlwNI	CAGNNNCTG	1 cut(s)	973
AoxI	GGCC	7 cut(s)	113, 217, 229, 370, 487, 540, 960
ApeKI	GCWGC	8 cut(s)	323, 468, 588, 710, 713, 837, 970, 979
ApoI	RAATTY	1 cut(s)	263
ArsI	GACNNNNNNTTYG	2 cut(s)	439, 471
AspLEI	GCGC	6 cut(s)	311, 323, 521, 554, 596, 958
AspS9I	GGNCC	4 cut(s)	229, 427, 447, 690
AsuC2I	CCSGG	1 cut(s)	117
AsuHPI	GGTGA	5 cut(s)	100, 118, 343, 505, 834
AsuII	TTCGAA	1 cut(s)	458
AvaII	GGWCC	3 cut(s)	427, 447, 690
BalI	TGGCCA	1 cut(s)	962
BanI	GGYRCC	1 cut(s)	878
BanII	GRGCYC	1 cut(s)	507
Bbv12I	GWGCWC	1 cut(s)	507
BbvI	GCAGC	7 cut(s)	310, 455, 600, 697, 700, 849, 957
BccI	CCATC	2 cut(s)	200, 734
BceAI	ACGGC	5 cut(s)	334, 376, 502, 541, 607
BcgI	CGANNNNNNTGC	2 cut(s)	222, 256
BciT130I	CCWGG	1 cut(s)	211
BcnI	CCSGG	1 cut(s)	117
BcoDI	GTCTC	2 cut(s)	176, 771
BfaI	CTAG	1 cut(s)	747
BfmI	CTRYAG	1 cut(s)	807
BfoI	RGCGCY	2 cut(s)	324, 522
BmcAI	AGTACT	1 cut(s)	581
Bme1390I	CCNGG	2 cut(s)	117, 211
Bme18I	GGWCC	3 cut(s)	427, 447, 690
BmgT120I	GGNCC	4 cut(s)	229, 427, 447, 690
BmiI	GGNNCC	8 cut(s)	6, 230, 292, 364, 429, 448, 849, 880
BmrFI	CCNGG	2 cut(s)	117, 211
BmsI	GCATC	2 cut(s)	23, 911
Bpu14I	TTCGAA	1 cut(s)	458
BpuEI	CTTGAG	1 cut(s)	491
BpuMI	CCSGG	1 cut(s)	117
BsaHI	GRCGYC	1 cut(s)	387
BsaI	GGTCTC	1 cut(s)	176
BsaJI	CCNNGG	1 cut(s)	210
BsaWI	WCCGGW	2 cut(s)	607, 844
Bsc4I	CCNNNNNNNGG	5 cut(s)	45, 158, 226, 421, 437
Bse118I	RCCGGY	5 cut(s)	134, 158, 257, 311, 464
BseBI	CCWGG	1 cut(s)	211
BseDI	CCNNGG	1 cut(s)	210
BseGI	GGATG	1 cut(s)	626
BseLI	CCNNNNNNNGG	5 cut(s)	45, 158, 226, 421, 437
BseMII	CTCAG	3 cut(s)	336, 650, 782
BseX3I	CGGCCG	1 cut(s)	217
BseXI	GCAGC	7 cut(s)	310, 455, 600, 697, 700, 849, 957
Bsh1236I	CGCG	4 cut(s)	554, 596, 916, 956
Bsh1285I	CGRYCG	1 cut(s)	220
BshFI	GGCC	7 cut(s)	115, 219, 231, 372, 489, 542, 962
BshNI	GGYRCC	1 cut(s)	878
BsiEI	CGRYCG	1 cut(s)	220
BsiHKAI	GWGCWC	1 cut(s)	507
BsiWI	CGTACG	1 cut(s)	885
BslFI	GGGAC	4 cut(s)	13, 413, 460, 786
BslI	CCNNNNNNNGG	5 cut(s)	45, 158, 226, 421, 437
BsmAI	GTCTC	2 cut(s)	176, 771
BsmBI	CGTCTC	1 cut(s)	771
BsmFI	GGGAC	4 cut(s)	13, 413, 460, 786
BsmI	GAATGC	2 cut(s)	120, 311
BsnI	GGCC	7 cut(s)	115, 219, 231, 372, 489, 542, 962
Bso31I	GGTCTC	1 cut(s)	176
Bsp119I	TTCGAA	1 cut(s)	458
Bsp1286I	GDGCHC	1 cut(s)	507
Bsp143I	GATC	2 cut(s)	478, 889
BspANI	GGCC	7 cut(s)	115, 219, 231, 372, 489, 542, 962
BspCNI	CTCAG	3 cut(s)	337, 649, 781
BspFNI	CGCG	4 cut(s)	554, 596, 916, 956
BspLI	GGNNCC	8 cut(s)	6, 230, 292, 364, 429, 448, 849, 880
BspQI	GCTCTTC	1 cut(s)	989
BspT104I	TTCGAA	1 cut(s)	458
BspT107I	GGYRCC	1 cut(s)	878
BspTNI	GGTCTC	1 cut(s)	176
BsrFI	RCCGGY	5 cut(s)	134, 158, 257, 311, 464
BssAI	RCCGGY	5 cut(s)	134, 158, 257, 311, 464
BssECI	CCNNGG	1 cut(s)	210
BssMI	GATC	2 cut(s)	478, 889
BssNI	GRCGYC	1 cut(s)	387
Bst2UI	CCWGG	1 cut(s)	211
Bst4CI	ACNGT	7 cut(s)	109, 404, 455, 584, 671, 825, 952
Bst6I	CTCTTC	1 cut(s)	989
BstACI	GRCGYC	1 cut(s)	387
BstBI	TTCGAA	1 cut(s)	458
BstC8I	GCNNGC	7 cut(s)	136, 140, 333, 544, 556, 620, 960
BstDEI	CTNAG	3 cut(s)	345, 636, 768
BstEII	GGTNACC	2 cut(s)	511, 946
BstF5I	GGATG	1 cut(s)	626
BstFNI	CGCG	4 cut(s)	554, 596, 916, 956
BstH2I	RGCGCY	2 cut(s)	324, 522
BstHHI	GCGC	6 cut(s)	311, 323, 521, 554, 596, 958
BstKTI	GATC	2 cut(s)	481, 892
BstMAI	GTCTC	2 cut(s)	176, 771
BstMBI	GATC	2 cut(s)	478, 889
BstMCI	CGRYCG	1 cut(s)	220
BstNI	CCWGG	1 cut(s)	211
BstNSI	RCATGY	3 cut(s)	665, 708, 932
BstPI	GGTNACC	2 cut(s)	511, 946
BstSCI	CCNGG	2 cut(s)	115, 209
BstSFI	CTRYAG	1 cut(s)	807
BstUI	CGCG	4 cut(s)	554, 596, 916, 956
BstV1I	GCAGC	7 cut(s)	310, 455, 600, 697, 700, 849, 957
BstXI	CCANNNNNNTGG	1 cut(s)	210
BstZI	CGGCCG	1 cut(s)	217
BsuRI	GGCC	7 cut(s)	115, 219, 231, 372, 489, 542, 962
BtsCI	GGATG	1 cut(s)	626
BtsI	GCAGTG	1 cut(s)	448
BtsIMutI	CAGTG	1 cut(s)	448
Cac8I	GCNNGC	7 cut(s)	136, 140, 333, 544, 556, 620, 960
CaiI	CAGNNNCTG	1 cut(s)	973
CciNI	GCGGCCGC	1 cut(s)	217
CfoI	GCGC	6 cut(s)	311, 323, 521, 554, 596, 958
Cfr10I	RCCGGY	5 cut(s)	134, 158, 257, 311, 464
Cfr13I	GGNCC	4 cut(s)	229, 427, 447, 690
CseI	GACGC	2 cut(s)	262, 753
Csp6I	GTAC	7 cut(s)	103, 580, 603, 813, 819, 886, 918
CspCI	CAANNNNNGTGG	2 cut(s)	145, 180
CviAII	CATG	3 cut(s)	662, 705, 929
CviQI	GTAC	7 cut(s)	103, 580, 603, 813, 819, 886, 918
DdeI	CTNAG	3 cut(s)	345, 636, 768
DpnI	GATC	2 cut(s)	480, 891
DpnII	GATC	2 cut(s)	478, 889
EaeI	YGGCCR	3 cut(s)	113, 217, 960
EagI	CGGCCG	1 cut(s)	217
Eam1104I	CTCTTC	1 cut(s)	989
EarI	CTCTTC	1 cut(s)	989
Ecl136II	GAGCTC	1 cut(s)	505
EclXI	CGGCCG	1 cut(s)	217
Eco24I	GRGCYC	1 cut(s)	507
Eco31I	GGTCTC	1 cut(s)	176
Eco47I	GGWCC	3 cut(s)	427, 447, 690
Eco52I	CGGCCG	1 cut(s)	217
Eco53kI	GAGCTC	1 cut(s)	505
Eco91I	GGTNACC	2 cut(s)	511, 946
EcoICRI	GAGCTC	1 cut(s)	505
EcoO65I	GGTNACC	2 cut(s)	511, 946
EcoRII	CCWGG	1 cut(s)	209
EcoT38I	GRGCYC	1 cut(s)	507
Esp3I	CGTCTC	1 cut(s)	771
FaeI	CATG	3 cut(s)	665, 708, 932
FaiI	YATR	7 cut(s)	41, 419, 600, 663, 679, 706, 930
FaqI	GGGAC	4 cut(s)	13, 413, 460, 786
FatI	CATG	3 cut(s)	661, 704, 928
FauI	CCCGC	3 cut(s)	336, 340, 931
FblI	GTMKAC	2 cut(s)	399, 830
FokI	GGATG	1 cut(s)	613
FriOI	GRGCYC	1 cut(s)	507
FspBI	CTAG	1 cut(s)	747
GlaI	GCGC	6 cut(s)	310, 322, 520, 553, 595, 957
HaeII	RGCGCY	2 cut(s)	324, 522
HaeIII	GGCC	7 cut(s)	115, 219, 231, 372, 489, 542, 962
HgaI	GACGC	2 cut(s)	262, 753
HhaI	GCGC	6 cut(s)	311, 323, 521, 554, 596, 958
Hin1I	GRCGYC	1 cut(s)	387
Hin1II	CATG	3 cut(s)	665, 708, 932
Hin6I	GCGC	6 cut(s)	309, 321, 519, 552, 594, 956
HinP1I	GCGC	6 cut(s)	309, 321, 519, 552, 594, 956
HincII	GTYRAC	2 cut(s)	36, 400
HindII	GTYRAC	2 cut(s)	36, 400
HinfI	GANTC	1 cut(s)	251
HpaI	GTTAAC	1 cut(s)	36
HphI	GGTGA	5 cut(s)	100, 118, 343, 505, 834
Hpy188I	TCNGA	3 cut(s)	153, 502, 639
Hpy188III	TCNNGA	2 cut(s)	60, 646
Hpy99I	CGWCG	8 cut(s)	362, 401, 404, 527, 686, 829, 910, 956
HpyAV	CCTTC	5 cut(s)	158, 507, 527, 709, 869
HpyCH4III	ACNGT	7 cut(s)	109, 404, 455, 584, 671, 825, 952
HpyCH4IV	ACGT	1 cut(s)	387
HpyCH4V	TGCA	4 cut(s)	546, 588, 618, 932
HpyF3I	CTNAG	3 cut(s)	345, 636, 768
HpySE526I	ACGT	1 cut(s)	387
Hsp92I	GRCGYC	1 cut(s)	387
Hsp92II	CATG	3 cut(s)	665, 708, 932
HspAI	GCGC	6 cut(s)	309, 321, 519, 552, 594, 956
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
KspAI	GTTAAC	1 cut(s)	36
Kzo9I	GATC	2 cut(s)	478, 889
LguI	GCTCTTC	1 cut(s)	989
LmnI	GCTCC	6 cut(s)	10, 205, 248, 296, 368, 847
Lsp1109I	GCAGC	7 cut(s)	310, 455, 600, 697, 700, 849, 957
LweI	GCATC	2 cut(s)	23, 911
MaeI	CTAG	1 cut(s)	747
MaeII	ACGT	1 cut(s)	387
MaeIII	GTNAC	6 cut(s)	274, 314, 404, 511, 671, 946
MalI	GATC	2 cut(s)	480, 891
MboI	GATC	2 cut(s)	478, 889
MboII	GAAGA	2 cut(s)	976, 979
MfeI	CAATTG	1 cut(s)	933
MhlI	GDGCHC	1 cut(s)	507
MlsI	TGGCCA	1 cut(s)	962
MluCI	AATT	2 cut(s)	263, 933
MluI	ACGCGT	1 cut(s)	914
MluNI	TGGCCA	1 cut(s)	962
MlyI	GAGTC	1 cut(s)	245
MmeI	TCCRAC	2 cut(s)	176, 227
Mox20I	TGGCCA	1 cut(s)	962
MreI	CGCCGGCG	1 cut(s)	134
MroNI	GCCGGC	1 cut(s)	134
MscI	TGGCCA	1 cut(s)	962
MseI	TTAA	1 cut(s)	35
MslI	CAYNNNNRTG	1 cut(s)	86
Msp20I	TGGCCA	1 cut(s)	962
MspA1I	CMGCKG	2 cut(s)	591, 970
MspR9I	CCNGG	2 cut(s)	117, 211
MunI	CAATTG	1 cut(s)	933
Mva1269I	GAATGC	2 cut(s)	120, 311
MvaI	CCWGG	1 cut(s)	211
MvnI	CGCG	4 cut(s)	554, 596, 916, 956
NaeI	GCCGGC	1 cut(s)	136
NciI	CCSGG	1 cut(s)	117
NdeII	GATC	2 cut(s)	478, 889
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	3 cut(s)	665, 708, 932
NlaIV	GGNNCC	8 cut(s)	6, 230, 292, 364, 429, 448, 849, 880
NmuCI	GTSAC	2 cut(s)	274, 511
NotI	GCGGCCGC	1 cut(s)	217
NspI	RCATGY	3 cut(s)	665, 708, 932
NspV	TTCGAA	1 cut(s)	458
OliI	CACNNNNGTG	1 cut(s)	86
PciI	ACATGT	1 cut(s)	704
PciSI	GCTCTTC	1 cut(s)	989
PcsI	WCGNNNNNNNCGW	3 cut(s)	393, 681, 894
PctI	GAATGC	2 cut(s)	120, 311
PdiI	GCCGGC	1 cut(s)	136
Pfl23II	CGTACG	1 cut(s)	885
PleI	GAGTC	1 cut(s)	245
PpsI	GAGTC	1 cut(s)	245
PscI	ACATGT	1 cut(s)	704
Psp124BI	GAGCTC	1 cut(s)	507
Psp6I	CCWGG	1 cut(s)	209
PspEI	GGTNACC	2 cut(s)	511, 946
PspGI	CCWGG	1 cut(s)	209
PspLI	CGTACG	1 cut(s)	885
PspN4I	GGNNCC	8 cut(s)	6, 230, 292, 364, 429, 448, 849, 880
PspPI	GGNCC	4 cut(s)	229, 427, 447, 690
PstNI	CAGNNNCTG	1 cut(s)	973
PvuII	CAGCTG	1 cut(s)	970
RsaI	GTAC	7 cut(s)	104, 581, 604, 814, 820, 887, 919
RsaNI	GTAC	7 cut(s)	103, 580, 603, 813, 819, 886, 918
RseI	CAYNNNNRTG	1 cut(s)	86
SacI	GAGCTC	1 cut(s)	507
SalI	GTCGAC	1 cut(s)	398
SapI	GCTCTTC	1 cut(s)	989
SaqAI	TTAA	1 cut(s)	35
Sau3AI	GATC	2 cut(s)	478, 889
Sau96I	GGNCC	4 cut(s)	229, 427, 447, 690
ScaI	AGTACT	1 cut(s)	581
SchI	GAGTC	1 cut(s)	245
ScrFI	CCNGG	2 cut(s)	117, 211
SduI	GDGCHC	1 cut(s)	507
SfaNI	GCATC	2 cut(s)	23, 911
SfcI	CTRYAG	1 cut(s)	807
SfuI	TTCGAA	1 cut(s)	458
SgrAI	CRCCGGYG	1 cut(s)	134
SgrDI	CGTCGACG	1 cut(s)	398
SinI	GGWCC	3 cut(s)	427, 447, 690
SmiMI	CAYNNNNRTG	1 cut(s)	86
SmlI	CTYRAG	1 cut(s)	506
SmoI	CTYRAG	1 cut(s)	506
Sse9I	AATT	2 cut(s)	263, 933
SspMI	CTAG	1 cut(s)	747
SstI	GAGCTC	1 cut(s)	507
StyD4I	CCNGG	2 cut(s)	115, 209
TaaI	ACNGT	7 cut(s)	109, 404, 455, 584, 671, 825, 952
TaiI	ACGT	1 cut(s)	390
TaqI	TCGA	5 cut(s)	357, 375, 399, 458, 477
TasI	AATT	2 cut(s)	263, 933
TatI	WGTACW	2 cut(s)	102, 579
TauI	GCSGC	7 cut(s)	219, 222, 291, 372, 441, 577, 594
Tru1I	TTAA	1 cut(s)	35
Tru9I	TTAA	1 cut(s)	35
TscAI	CASTG	1 cut(s)	448
TseFI	GTSAC	2 cut(s)	274, 511
TseI	GCWGC	8 cut(s)	323, 468, 588, 710, 713, 837, 970, 979
Tsp45I	GTSAC	2 cut(s)	274, 511
TspRI	CASTG	1 cut(s)	448
VpaK11BI	GGWCC	3 cut(s)	427, 447, 690
XapI	RAATTY	1 cut(s)	263
XceI	RCATGY	3 cut(s)	665, 708, 932
XcmI	CCANNNNNNNNNTGG	1 cut(s)	82
XmiI	GTMKAC	2 cut(s)	399, 830
XspI	CTAG	1 cut(s)	747
ZraI	GACGTC	1 cut(s)	388
ZrmI	AGTACT	1 cut(s)	581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.