Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0006511

Physical Location & Seq

Genomic Coordinates Forward (+)

6098530 .. 6101542

Gene Structure 3013 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG077000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGCTCCATTGACACCCTTCTCGCTCTCTCTATTAACCCTTCTCGGTCTATTAACATCAGGAGCGCTGTCAACGACATTCACAATGGTAAACAAATGCGAGTACGCAGTGTGGCCGGGCATTCTCTCCTACCCCGGCGCTCCGCCGTTTCCGACTGCCGGCTTCGCTCTCCAGAACGGCGAGACCATGACCCTAATCGCCCCCGCCTCCTGGAGAGGCCGCTTGTGGGGCCGAACCCTCTGCACCGACGACTCCACGGGAAACTTCTCCTGCGTCACAGGCGATTGCGGCTCCGGAAAGCAAGAATGCTCCGGAAGCTCCGCCCCTCCCGCAACTCTCGCCGAGTTCACCTTAGGCGGCGCCGGCAGCCCTGACGTCTTTGACGTCAGCCTCGTCGACGGTTACAACCTCCCTATGCTGGTGGTTCCCCAGGGTGGGACCGGCACCAATTGTAACAACACCGGCTGCGTGGTCGACCTTAACGGCGTTTGTCCCAAGGAGCTCCAGGTGACTAGCGCTGCGGGAAGGGAAGTCGTCGGGTGCAAGAGCGCGTGCGGGGCGTTCCAGGAGCCGCAATACTGTTGCACCGGCGCGTACGCTACACCCGAGACGTGCAAGCCTTCTTCGTACTCGCAAATATTCAAGAACGCGTGCCCTCTCGCGTACAGTTACGCATACGACGATAAGACCAGCACCTCCACATGTGCCAATGCCAATTACACCATCACCTTCTGTCCCTCTCCGAACACCAGGTTACCATCTCTTCAACCCGAAGACGATCCCCAATACACACTGTGCAAGCAACCTTTCAATTGTGGTAACCTCACAAACATATCCTACTCTTTCTGGGGAGGATCCATTCGCCCCCAAGAGTGCGGTCGCTTAGGCTTCGAACTCACCAACTGCGAAAACGAAACTCAACTCCCTCACATAGTAATCGAAAAGCTAGATTTCCATGTGTCCAACATCAACAGCCAAGATCTTCTTCACACCATGACAATCGCTCGCTCCGACCTCTGGGACAGTCCTTGTACTGACCTCCTCGTCAACACCACTCTCGACTACAACCGTTTCTCTTATGTCCCAACTGTTCGCAACCTCACCTTGTACTACGGATGCCTCCCTCAAAACGAATCGGTCCTCAACAATTTTACGTGCACAGCTAAGGAAACAAATATTTCGTACTACGTGGATGATTCACTCGCAAGGGTTGATGTTCCGGGCCGACCCACATGTTCTACCAAAATCATAGTCCCCATTTTTTGGGAGGGCTTTGATGTAATGCCAGACAATGCAACGGAAGAAGTGGAAAAAGTTTTGAAGCAAGGGTTTCAGGTTGAGTACAGCGCGGATTGGGATCTCTGTAGGTCATGCATGAACTCTAAAGGCACCTGTGGATCGAACGCAACGACGGATTCGTTTCTCTGCCTTTGCGGGGATCGTCCTTCCAATTCTACTTGTCCAATTGTTCATGGCACCAAGTTCAACTGGAAAACAAAGGTTTTCATAGGCGTAGCTGCGACTATTGCAGGATCTTGTATTTTATTGTTTGTTATTCTCTTCCGTTGGACTTCACTGATTAGGGGAAATGACAATGAAGATGCTGCTGAGGCCTTCATTCAGAACATTGGACCTCTAGCAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

548

Amino Acids

59.27

Weight (kDa)

4.67

Isoelectric Point (pI)

46.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thaumatin	PF00314	31 - 246	9.3e-80	Thaumatin family
WAK_assoc	PF14380	398 - 480	4.7e-15	Wall-associated receptor kinase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20030 AT1G20030 AT1G75800
fragaria_vesca	FvH4_2g38320 FvH4_2g38320 FvH4_2g38320
malus_domestica	MD08G1011700.v1.1 MD08G1011900.v1.1
prunus_persica	Prupe.1G364200_v2.0.a1 Prupe.1G364200_v2.0.a1
pyrus_communis	pycom08g01010 pycom08g01030 pycom15g00980
rosa_chinensis	RchiOBHm_Chr6g0303041 RchiOBHm_Chr7g0185921
rosa_laevigata	RLG00000011113
rosa_multiflora	Rmu_sc0005665.1_g000025 Rmu_sc0018020.1_g000001 Rmu_sc0023426.1_g000001
rosa_rugosa	Rorug06G0319000.1
rosa_samantha	Rh6AG432500 Rh6BG470100 Rh6CG444900 Rh6DG431600 Rh7DG077000
rosa_wichuraiana	Rw6G037490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1043
AatII	GACGTC	2 cut(s)	378, 387
AccB1I	GGYRCC	4 cut(s)	359, 443, 1388, 1475
AccB7I	CCANNNNNTGG	1 cut(s)	1263
AccI	GTMKAC	2 cut(s)	396, 474
AccII	CGCG	5 cut(s)	551, 593, 650, 662, 1349
AccIII	TCCGGA	2 cut(s)	293, 311
AclWI	GGATC	7 cut(s)	773, 849, 862, 1365, 1405, 1446, 1540
AcoI	YGGCCR	1 cut(s)	113
AcyI	GRCGYC	3 cut(s)	360, 375, 384
AdeI	CACNNNGTG	1 cut(s)	795
AfaI	GTAC	8 cut(s)	104, 596, 629, 665, 1033, 1109, 1184, 1343
AfeI	AGCGCT	2 cut(s)	66, 517
AfiI	CCNNNNNNNGG	9 cut(s)	158, 210, 226, 418, 434, 435, 1017, 1263, 1435
AflIII	ACRYGT	3 cut(s)	648, 701, 1232
AgsI	TTSAA	5 cut(s)	643, 767, 811, 1321, 1486
AjiI	CACGTC	1 cut(s)	612
AjnI	CCWGG	5 cut(s)	209, 429, 504, 564, 749
AjuI	GAANNNNNNNTTGG	2 cut(s)	969, 1001
AluBI	AGCT	5 cut(s)	318, 502, 946, 1163, 1517
AluI	AGCT	5 cut(s)	318, 502, 946, 1163, 1517
Alw21I	GWGCWC	2 cut(s)	504, 1160
Alw26I	GTCTC	2 cut(s)	176, 602
Alw44I	GTGCAC	1 cut(s)	1156
AlwI	GGATC	7 cut(s)	773, 849, 862, 1365, 1405, 1446, 1540
Ama87I	CYCGRG	1 cut(s)	605
Aor13HI	TCCGGA	2 cut(s)	293, 311
Aor51HI	AGCGCT	2 cut(s)	66, 517
AoxI	GGCC	5 cut(s)	113, 217, 229, 1222, 1611
ApaLI	GTGCAC	1 cut(s)	1156
ApeKI	GCWGC	5 cut(s)	366, 465, 518, 1517, 1604
ArsI	GACNNNNNNTTYG	2 cut(s)	1236, 1268
AspLEI	GCGC	7 cut(s)	67, 140, 362, 518, 551, 593, 1349
AspS9I	GGNCC	5 cut(s)	229, 438, 1138, 1222, 1631
AsuC2I	CCSGG	3 cut(s)	117, 135, 1221
AsuHPI	GGTGA	5 cut(s)	340, 520, 718, 889, 1093
AsuII	TTCGAA	1 cut(s)	891
AvaI	CYCGRG	1 cut(s)	605
AvaII	GGWCC	3 cut(s)	438, 1138, 1631
AxyI	CCTNAGG	1 cut(s)	352
BaeGI	GKGCMC	2 cut(s)	656, 1160
BamHI	GGATCC	1 cut(s)	854
BanI	GGYRCC	4 cut(s)	359, 443, 1388, 1475
BanII	GRGCYC	1 cut(s)	504
BbsI	GAAGAC	1 cut(s)	780
Bbv12I	GWGCWC	2 cut(s)	504, 1160
BbvCI	CCTCAGC	1 cut(s)	1608
BbvI	GCAGC	5 cut(s)	378, 452, 505, 1504, 1591
BccI	CCATC	2 cut(s)	731, 766
BceAI	ACGGC	3 cut(s)	130, 193, 499
BcgI	CGANNNNNNTGC	2 cut(s)	222, 256
BciT130I	CCWGG	5 cut(s)	211, 431, 506, 566, 751
BcnI	CCSGG	3 cut(s)	117, 135, 1221
BcoDI	GTCTC	2 cut(s)	176, 602
BfaI	CTAG	3 cut(s)	513, 947, 1637
BfmI	CTRYAG	1 cut(s)	1363
BfoI	RGCGCY	4 cut(s)	68, 141, 363, 519
BglII	AGATCT	1 cut(s)	979
BisI	GCNGC	9 cut(s)	220, 289, 358, 367, 466, 519, 572, 1518, 1605
BlsI	GCNGC	9 cut(s)	221, 290, 359, 368, 467, 520, 573, 1519, 1606
Bme1390I	CCNGG	8 cut(s)	117, 135, 211, 431, 506, 566, 751, 1221
Bme18I	GGWCC	3 cut(s)	438, 1138, 1631
BmeT110I	CYCGRG	1 cut(s)	605
BmgBI	CACGTC	1 cut(s)	612
BmgT120I	GGNCC	5 cut(s)	229, 438, 1138, 1222, 1631
BmrFI	CCNGG	8 cut(s)	117, 135, 211, 431, 506, 566, 751, 1221
BmsI	GCATC	2 cut(s)	1106, 1591
BpiI	GAAGAC	1 cut(s)	780
BpmI	CTGGAG	3 cut(s)	155, 232, 488
Bpu10I	CCTNAGC	3 cut(s)	883, 1164, 1608
Bpu14I	TTCGAA	1 cut(s)	891
BpuMI	CCSGG	3 cut(s)	117, 135, 1221
BsaAI	YACGTR	2 cut(s)	1155, 1189
BsaBI	GATNNNNATC	1 cut(s)	1356
BsaHI	GRCGYC	3 cut(s)	360, 375, 384
BsaI	GGTCTC	1 cut(s)	176
BsaJI	CCNNGG	5 cut(s)	133, 255, 429, 430, 495
BsaWI	WCCGGW	2 cut(s)	293, 311
Bsc4I	CCNNNNNNNGG	9 cut(s)	158, 210, 226, 418, 434, 435, 1017, 1263, 1435
Bse118I	RCCGGY	5 cut(s)	158, 362, 440, 461, 587
Bse1I	ACTGG	1 cut(s)	1493
Bse21I	CCTNAGG	1 cut(s)	352
Bse8I	GATNNNNATC	1 cut(s)	1356
BseAI	TCCGGA	2 cut(s)	293, 311
BseBI	CCWGG	5 cut(s)	211, 431, 506, 566, 751
BseDI	CCNNGG	5 cut(s)	133, 255, 429, 430, 495
BseGI	GGATG	2 cut(s)	1121, 1198
BseJI	GATNNNNATC	1 cut(s)	1356
BseLI	CCNNNNNNNGG	9 cut(s)	158, 210, 226, 418, 434, 435, 1017, 1263, 1435
BseMII	CTCAG	1 cut(s)	1599
BseNI	ACTGG	1 cut(s)	1493
BseRI	GAGGAG	1 cut(s)	1031
BseSI	GKGCMC	2 cut(s)	656, 1160
BseXI	GCAGC	5 cut(s)	378, 452, 505, 1504, 1591
BsgI	GTGCAG	1 cut(s)	226
Bsh1236I	CGCG	5 cut(s)	551, 593, 650, 662, 1349
Bsh1285I	CGRYCG	1 cut(s)	880
BshFI	GGCC	5 cut(s)	115, 219, 231, 1224, 1613
BshNI	GGYRCC	4 cut(s)	359, 443, 1388, 1475
BsiEI	CGRYCG	1 cut(s)	880
BsiHKAI	GWGCWC	2 cut(s)	504, 1160
BsiHKCI	CYCGRG	1 cut(s)	605
BsiWI	CGTACG	1 cut(s)	594
BslFI	GGGAC	6 cut(s)	451, 477, 720, 1034, 1067, 1238
BslI	CCNNNNNNNGG	9 cut(s)	158, 210, 226, 418, 434, 435, 1017, 1263, 1435
BsmAI	GTCTC	2 cut(s)	176, 602
BsmBI	CGTCTC	1 cut(s)	602
BsmFI	GGGAC	6 cut(s)	451, 477, 720, 1034, 1067, 1238
BsmI	GAATGC	2 cut(s)	120, 311
BsnI	GGCC	5 cut(s)	115, 219, 231, 1224, 1613
Bso31I	GGTCTC	1 cut(s)	176
BsoBI	CYCGRG	1 cut(s)	605
Bsp119I	TTCGAA	1 cut(s)	891
Bsp1286I	GDGCHC	3 cut(s)	504, 656, 1160
Bsp13I	TCCGGA	2 cut(s)	293, 311
Bsp143I	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
BspANI	GGCC	5 cut(s)	115, 219, 231, 1224, 1613
BspCNI	CTCAG	1 cut(s)	1600
BspEI	TCCGGA	2 cut(s)	293, 311
BspFNI	CGCG	5 cut(s)	551, 593, 650, 662, 1349
BspPI	GGATC	7 cut(s)	773, 849, 862, 1365, 1405, 1446, 1540
BspT104I	TTCGAA	1 cut(s)	891
BspT107I	GGYRCC	4 cut(s)	359, 443, 1388, 1475
BspTNI	GGTCTC	1 cut(s)	176
BsrFI	RCCGGY	5 cut(s)	158, 362, 440, 461, 587
BsrI	ACTGG	1 cut(s)	1493
BssAI	RCCGGY	5 cut(s)	158, 362, 440, 461, 587
BssECI	CCNNGG	5 cut(s)	133, 255, 429, 430, 495
BssMI	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
BssNI	GRCGYC	3 cut(s)	360, 375, 384
BssT1I	CCWWGG	1 cut(s)	495
Bst2UI	CCWGG	5 cut(s)	211, 431, 506, 566, 751
Bst4CI	ACNGT	7 cut(s)	401, 581, 668, 795, 1025, 1070, 1090
Bst6I	CTCTTC	2 cut(s)	768, 1565
BstACI	GRCGYC	3 cut(s)	360, 375, 384
BstBAI	YACGTR	2 cut(s)	1155, 1189
BstBI	TTCGAA	1 cut(s)	891
BstC8I	GCNNGC	7 cut(s)	160, 364, 553, 617, 652, 800, 1006
BstDEI	CTNAG	4 cut(s)	352, 883, 1164, 1608
BstDSI	CCRYGG	1 cut(s)	255
BstEII	GGTNACC	2 cut(s)	753, 818
BstF5I	GGATG	2 cut(s)	1121, 1198
BstFNI	CGCG	5 cut(s)	551, 593, 650, 662, 1349
BstH2I	RGCGCY	4 cut(s)	68, 141, 363, 519
BstHHI	GCGC	7 cut(s)	67, 140, 362, 518, 551, 593, 1349
BstKTI	GATC	7 cut(s)	781, 857, 982, 1360, 1400, 1441, 1535
BstMAI	GTCTC	2 cut(s)	176, 602
BstMBI	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
BstMCI	CGRYCG	1 cut(s)	880
BstNI	CCWGG	5 cut(s)	211, 431, 506, 566, 751
BstNSI	RCATGY	2 cut(s)	705, 1236
BstPI	GGTNACC	2 cut(s)	753, 818
BstSCI	CCNGG	8 cut(s)	115, 133, 209, 429, 504, 564, 749, 1219
BstSFI	CTRYAG	1 cut(s)	1363
BstSLI	GKGCMC	2 cut(s)	656, 1160
BstUI	CGCG	5 cut(s)	551, 593, 650, 662, 1349
BstV1I	GCAGC	5 cut(s)	378, 452, 505, 1504, 1591
BstV2I	GAAGAC	1 cut(s)	780
BstX2I	RGATCY	4 cut(s)	854, 979, 1357, 1532
BstYI	RGATCY	4 cut(s)	854, 979, 1357, 1532
Bsu36I	CCTNAGG	1 cut(s)	352
BsuRI	GGCC	5 cut(s)	115, 219, 231, 1224, 1613
BtgI	CCRYGG	1 cut(s)	255
BtrI	CACGTC	1 cut(s)	612
BtsCI	GGATG	2 cut(s)	1121, 1198
BtsI	GCAGTG	1 cut(s)	114
BtsIMutI	CAGTG	3 cut(s)	114, 791, 1574
Cac8I	GCNNGC	7 cut(s)	160, 364, 553, 617, 652, 800, 1006
CfoI	GCGC	7 cut(s)	67, 140, 362, 518, 551, 593, 1349
Cfr10I	RCCGGY	5 cut(s)	158, 362, 440, 461, 587
Cfr13I	GGNCC	5 cut(s)	229, 438, 1138, 1222, 1631
CseI	GACGC	1 cut(s)	262
CsiI	ACCWGGT	1 cut(s)	749
Csp6I	GTAC	8 cut(s)	103, 595, 628, 664, 1032, 1108, 1183, 1342
CviAII	CATG	8 cut(s)	187, 702, 956, 994, 1233, 1371, 1375, 1472
CviQI	GTAC	8 cut(s)	103, 595, 628, 664, 1032, 1108, 1183, 1342
DdeI	CTNAG	4 cut(s)	352, 883, 1164, 1608
DinI	GGCGCC	1 cut(s)	361
DpnI	GATC	7 cut(s)	780, 856, 981, 1359, 1399, 1440, 1534
DpnII	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
DraIII	CACNNNGTG	1 cut(s)	795
DrdI	GACNNNNNNGTC	1 cut(s)	1043
DseDI	GACNNNNNNGTC	1 cut(s)	1043
EaeI	YGGCCR	1 cut(s)	113
Eam1104I	CTCTTC	2 cut(s)	768, 1565
EarI	CTCTTC	2 cut(s)	768, 1565
EciI	GGCGGA	2 cut(s)	132, 310
Ecl136II	GAGCTC	1 cut(s)	502
Eco130I	CCWWGG	1 cut(s)	495
Eco147I	AGGCCT	1 cut(s)	1613
Eco24I	GRGCYC	1 cut(s)	504
Eco31I	GGTCTC	1 cut(s)	176
Eco47I	GGWCC	3 cut(s)	438, 1138, 1631
Eco47III	AGCGCT	2 cut(s)	66, 517
Eco53kI	GAGCTC	1 cut(s)	502
Eco81I	CCTNAGG	1 cut(s)	352
Eco88I	CYCGRG	1 cut(s)	605
Eco91I	GGTNACC	2 cut(s)	753, 818
EcoICRI	GAGCTC	1 cut(s)	502
EcoO65I	GGTNACC	2 cut(s)	753, 818
EcoRII	CCWGG	5 cut(s)	209, 429, 504, 564, 749
EcoT14I	CCWWGG	1 cut(s)	495
EcoT22I	ATGCAT	1 cut(s)	1376
EcoT38I	GRGCYC	1 cut(s)	504
EgeI	GGCGCC	1 cut(s)	361
EheI	GGCGCC	1 cut(s)	361
ErhI	CCWWGG	1 cut(s)	495
Esp3I	CGTCTC	1 cut(s)	602
FaeI	CATG	8 cut(s)	190, 705, 959, 997, 1236, 1374, 1378, 1475
FalI	AAGNNNNNCTT	2 cut(s)	969, 1001
FaqI	GGGAC	6 cut(s)	451, 477, 720, 1034, 1067, 1238
FatI	CATG	8 cut(s)	186, 701, 955, 993, 1232, 1370, 1374, 1471
FauI	CCCGC	5 cut(s)	211, 337, 514, 548, 1427
FblI	GTMKAC	2 cut(s)	396, 474
Fnu4HI	GCNGC	9 cut(s)	220, 289, 358, 367, 466, 519, 572, 1518, 1605
FokI	GGATG	2 cut(s)	1128, 1205
FriOI	GRGCYC	1 cut(s)	504
Fsp4HI	GCNGC	9 cut(s)	220, 289, 358, 367, 466, 519, 572, 1518, 1605
FspBI	CTAG	3 cut(s)	513, 947, 1637
GlaI	GCGC	7 cut(s)	66, 139, 361, 517, 550, 592, 1348
GluI	GCNGC	9 cut(s)	220, 289, 358, 367, 466, 519, 572, 1518, 1605
GsuI	CTGGAG	3 cut(s)	155, 232, 488
HaeII	RGCGCY	4 cut(s)	68, 141, 363, 519
HaeIII	GGCC	5 cut(s)	115, 219, 231, 1224, 1613
HgaI	GACGC	1 cut(s)	262
HhaI	GCGC	7 cut(s)	67, 140, 362, 518, 551, 593, 1349
Hin1I	GRCGYC	3 cut(s)	360, 375, 384
Hin1II	CATG	8 cut(s)	190, 705, 959, 997, 1236, 1374, 1378, 1475
Hin6I	GCGC	7 cut(s)	65, 138, 360, 516, 549, 591, 1347
HinP1I	GCGC	7 cut(s)	65, 138, 360, 516, 549, 591, 1347
HincII	GTYRAC	4 cut(s)	72, 397, 475, 1048
HindII	GTYRAC	4 cut(s)	72, 397, 475, 1048
HinfI	GANTC	4 cut(s)	251, 1133, 1196, 1415
HphI	GGTGA	5 cut(s)	340, 520, 718, 889, 1093
Hpy166II	GTNNAC	7 cut(s)	72, 91, 348, 397, 475, 1048, 1158
Hpy188I	TCNGA	4 cut(s)	153, 744, 1012, 1623
Hpy188III	TCNNGA	6 cut(s)	60, 172, 294, 312, 643, 1058
Hpy8I	GTNNAC	7 cut(s)	72, 91, 348, 397, 475, 1048, 1158
Hpy99I	CGWCG	6 cut(s)	251, 398, 401, 539, 683, 1414
HpyAV	CCTTC	7 cut(s)	28, 50, 519, 630, 739, 1455, 1624
HpyCH4III	ACNGT	7 cut(s)	401, 581, 668, 795, 1025, 1070, 1090
HpyCH4IV	ACGT	5 cut(s)	375, 384, 611, 1154, 1188
HpyCH4V	TGCA	9 cut(s)	243, 543, 585, 615, 798, 1158, 1295, 1374, 1529
HpyF3I	CTNAG	4 cut(s)	352, 883, 1164, 1608
HpySE526I	ACGT	5 cut(s)	375, 384, 611, 1154, 1188
Hsp92I	GRCGYC	3 cut(s)	360, 375, 384
Hsp92II	CATG	8 cut(s)	190, 705, 959, 997, 1236, 1374, 1378, 1475
HspAI	GCGC	7 cut(s)	65, 138, 360, 516, 549, 591, 1347
KasI	GGCGCC	1 cut(s)	359
Kpn2I	TCCGGA	2 cut(s)	293, 311
KroI	GCCGGC	2 cut(s)	158, 362
KroNI	GCCGGC	2 cut(s)	160, 364
Kzo9I	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
Lsp1109I	GCAGC	5 cut(s)	378, 452, 505, 1504, 1591
LweI	GCATC	2 cut(s)	1106, 1591
MabI	ACCWGGT	1 cut(s)	749
MaeI	CTAG	3 cut(s)	513, 947, 1637
MaeII	ACGT	5 cut(s)	375, 384, 611, 1154, 1188
MaeIII	GTNAC	7 cut(s)	274, 401, 452, 508, 668, 753, 818
MalI	GATC	7 cut(s)	780, 856, 981, 1359, 1399, 1440, 1534
MboI	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
MboII	GAAGA	8 cut(s)	615, 755, 785, 974, 977, 1313, 1552, 1610
MfeI	CAATTG	3 cut(s)	448, 811, 1464
MflI	RGATCY	4 cut(s)	854, 979, 1357, 1532
MhlI	GDGCHC	3 cut(s)	504, 656, 1160
MluCI	AATT	6 cut(s)	448, 715, 811, 1147, 1450, 1464
MluI	ACGCGT	1 cut(s)	648
Mly113I	GGCGCC	1 cut(s)	360
MlyI	GAGTC	1 cut(s)	245
MmeI	TCCRAC	4 cut(s)	176, 987, 1035, 1547
Mph1103I	ATGCAT	1 cut(s)	1376
MroI	TCCGGA	2 cut(s)	293, 311
MroNI	GCCGGC	2 cut(s)	158, 362
MseI	TTAA	3 cut(s)	35, 53, 480
MspR9I	CCNGG	8 cut(s)	117, 135, 211, 431, 506, 566, 751, 1221
MunI	CAATTG	3 cut(s)	448, 811, 1464
Mva1269I	GAATGC	2 cut(s)	120, 311
MvaI	CCWGG	5 cut(s)	211, 431, 506, 566, 751
MvnI	CGCG	5 cut(s)	551, 593, 650, 662, 1349
NaeI	GCCGGC	2 cut(s)	160, 364
NarI	GGCGCC	1 cut(s)	360
NciI	CCSGG	3 cut(s)	117, 135, 1221
NdeII	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
NgoMIV	GCCGGC	2 cut(s)	158, 362
NlaIII	CATG	8 cut(s)	190, 705, 959, 997, 1236, 1374, 1378, 1475
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	2 cut(s)	274, 508
NsiI	ATGCAT	1 cut(s)	1376
NspI	RCATGY	2 cut(s)	705, 1236
NspV	TTCGAA	1 cut(s)	891
PasI	CCCWGGG	1 cut(s)	430
PceI	AGGCCT	1 cut(s)	1613
PciI	ACATGT	2 cut(s)	701, 1232
PcsI	WCGNNNNNNNCGW	7 cut(s)	381, 390, 603, 678, 1008, 1406, 1415
PctI	GAATGC	2 cut(s)	120, 311
PdiI	GCCGGC	2 cut(s)	160, 364
PfeI	GAWTC	3 cut(s)	1133, 1196, 1415
Pfl23II	CGTACG	1 cut(s)	594
PflMI	CCANNNNNTGG	1 cut(s)	1263
PfoI	TCCNGGA	2 cut(s)	209, 564
PkrI	GCNGC	9 cut(s)	221, 290, 359, 368, 467, 520, 573, 1519, 1606
PleI	GAGTC	1 cut(s)	245
PluTI	GGCGCC	1 cut(s)	363
PpsI	GAGTC	1 cut(s)	245
Ppu21I	YACGTR	2 cut(s)	1155, 1189
PscI	ACATGT	2 cut(s)	701, 1232
Psp124BI	GAGCTC	1 cut(s)	504
Psp6I	CCWGG	5 cut(s)	209, 429, 504, 564, 749
PspEI	GGTNACC	2 cut(s)	753, 818
PspGI	CCWGG	5 cut(s)	209, 429, 504, 564, 749
PspLI	CGTACG	1 cut(s)	594
PspPI	GGNCC	5 cut(s)	229, 438, 1138, 1222, 1631
PsuI	RGATCY	4 cut(s)	854, 979, 1357, 1532
RsaI	GTAC	8 cut(s)	104, 596, 629, 665, 1033, 1109, 1184, 1343
RsaNI	GTAC	8 cut(s)	103, 595, 628, 664, 1032, 1108, 1183, 1342
SacI	GAGCTC	1 cut(s)	504
SalI	GTCGAC	2 cut(s)	395, 473
SaqAI	TTAA	3 cut(s)	35, 53, 480
SatI	GCNGC	9 cut(s)	220, 289, 358, 367, 466, 519, 572, 1518, 1605
Sau3AI	GATC	7 cut(s)	778, 854, 979, 1357, 1397, 1438, 1532
Sau96I	GGNCC	5 cut(s)	229, 438, 1138, 1222, 1631
SchI	GAGTC	1 cut(s)	245
ScrFI	CCNGG	8 cut(s)	117, 135, 211, 431, 506, 566, 751, 1221
SduI	GDGCHC	3 cut(s)	504, 656, 1160
SexAI	ACCWGGT	1 cut(s)	749
SfaNI	GCATC	2 cut(s)	1106, 1591
SfcI	CTRYAG	1 cut(s)	1363
SfoI	GGCGCC	1 cut(s)	361
SfuI	TTCGAA	1 cut(s)	891
SgrAI	CRCCGGYG	1 cut(s)	587
SgrDI	CGTCGACG	1 cut(s)	395
SinI	GGWCC	3 cut(s)	438, 1138, 1631
Sse9I	AATT	6 cut(s)	448, 715, 811, 1147, 1450, 1464
SseBI	AGGCCT	1 cut(s)	1613
SspDI	GGCGCC	1 cut(s)	359
SspI	AATATT	2 cut(s)	639, 1177
SspMI	CTAG	3 cut(s)	513, 947, 1637
SstI	GAGCTC	1 cut(s)	504
StuI	AGGCCT	1 cut(s)	1613
StyD4I	CCNGG	8 cut(s)	115, 133, 209, 429, 504, 564, 749, 1219
StyI	CCWWGG	1 cut(s)	495
TaaI	ACNGT	7 cut(s)	401, 581, 668, 795, 1025, 1070, 1090
TaiI	ACGT	5 cut(s)	378, 387, 614, 1157, 1191
TaqI	TCGA	6 cut(s)	396, 474, 891, 939, 1059, 1400
TaqII	GACCGA	2 cut(s)	35, 1126
TasI	AATT	6 cut(s)	448, 715, 811, 1147, 1450, 1464
TatI	WGTACW	3 cut(s)	1031, 1107, 1341
TauI	GCSGC	4 cut(s)	222, 291, 360, 574
TfiI	GAWTC	3 cut(s)	1133, 1196, 1415
Tru1I	TTAA	3 cut(s)	35, 53, 480
Tru9I	TTAA	3 cut(s)	35, 53, 480
TscAI	CASTG	3 cut(s)	114, 798, 1581
TseFI	GTSAC	2 cut(s)	274, 508
TseI	GCWGC	5 cut(s)	366, 465, 518, 1517, 1604
Tsp45I	GTSAC	2 cut(s)	274, 508
TspDTI	ATGAA	5 cut(s)	1391, 1460, 1495, 1606, 1611
TspGWI	ACGGA	4 cut(s)	1128, 1313, 1427, 1553
TspRI	CASTG	3 cut(s)	114, 798, 1581
Van91I	CCANNNNNTGG	1 cut(s)	1263
VneI	GTGCAC	1 cut(s)	1156
VpaK11BI	GGWCC	3 cut(s)	438, 1138, 1631
XceI	RCATGY	2 cut(s)	705, 1236
XmiI	GTMKAC	2 cut(s)	396, 474
XspI	CTAG	3 cut(s)	513, 947, 1637
ZraI	GACGTC	2 cut(s)	376, 385
Zsp2I	ATGCAT	1 cut(s)	1376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.