Rmu_sc0005665.1_g000025

Thaumatin-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005665.1
Physical Location & Seq
Reverse (-)
99180 .. 101234
2055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005665.1_g000025.1.cds

Sequence Viewer

Length: 927 bp
atggtaaacaaatgcgggtacgcagtgtggccgggcattctctcccaacccggcgttccgcattttccgaccaccggcttcgctctccagaaaggcgagaccaagaccctaacctcccccgcctcctggagaggccgcttctggggccgaaccctctgcacccacgactccaccggaaacttctcctgcgtcacaggcgattgcggctccggaaagctagaatgctccggaagcgaagccacctttcccgtaactcgcgccgagttctccttaggcggcgccggcagccctgacgtctttgacgtcagcctcgtcgacggttacaacctccctatgctggtggttccccagggtgggaccggcaccaattgtaacaacaccggctgcgtggtcgaccttaacggcgtttgtcccaaggagctccaggtgactagcgctgcgggaagcgaagtcgtcgggtgcaagagcgcgtgcgaggcgttccaggagccgcaatactgttgcacaggcgcgtacgctacacccgagacgtgcaagcctttttcgtactcgcaaatattcaagaaggcgtgccctcacgcgtacagttacacatacgacgataataagaacaacttcgcatgtgccagtgccaattacaccatcactttctgtccctgtggatcgaacgcaacgacggattcgtttctctgcctttcctgggatcgtcctcccaattctactcgtccaattgttcatggcaccaagttcaactggaaaacaaaggttttcataggcgtagctgtgactattgcaggatcttgtattttattgtttgttattctcttccgttggacttcactgattagggaaaatgacaatgaagatgctgctgaggccttcgttcggaacattggacctctagcagtacaaagatacaaattttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

308

Amino Acids

33.16

Weight (kDa)

6.84

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 297, 306
AccB1I GGYRCC 3 cut(s) 278, 362, 740
AccI GTMKAC 2 cut(s) 315, 393
AccII CGCG 4 cut(s) 258, 470, 512, 581
AccIII TCCGGA 2 cut(s) 209, 227
AciI CCGC 8 cut(s) 15, 59, 120, 136, 204, 276, 440, 491
AclWI GGATC 3 cut(s) 670, 711, 805
AcoI YGGCCR 1 cut(s) 29
AcsI RAATTY 1 cut(s) 920
AcyI GRCGYC 3 cut(s) 279, 294, 303
AfaI GTAC 5 cut(s) 20, 515, 548, 584, 909
AfeI AGCGCT 1 cut(s) 436
AfiI CCNNNNNNNGG 8 cut(s) 74, 126, 142, 337, 353, 354, 700, 885
AflIII ACRYGT 1 cut(s) 579
AgsI TTSAA 2 cut(s) 562, 751
AjiI CACGTC 1 cut(s) 531
AjnI CCWGG 5 cut(s) 125, 348, 423, 483, 698
AjuI GAANNNNNNNTTGG 2 cut(s) 39, 71
AluBI AGCT 3 cut(s) 217, 421, 782
AluI AGCT 3 cut(s) 217, 421, 782
Alw21I GWGCWC 1 cut(s) 423
Alw26I GTCTC 2 cut(s) 92, 521
AlwI GGATC 3 cut(s) 670, 711, 805
Ama87I CYCGRG 1 cut(s) 524
Aor13HI TCCGGA 2 cut(s) 209, 227
Aor51HI AGCGCT 1 cut(s) 436
AoxI GGCC 4 cut(s) 29, 133, 145, 876
ApeKI GCWGC 4 cut(s) 285, 384, 437, 869
ApoI RAATTY 1 cut(s) 920
Asp700I GAANNNNTTC 1 cut(s) 614
AspLEI GCGC 5 cut(s) 260, 281, 437, 470, 512
AspS9I GGNCC 3 cut(s) 145, 357, 896
AsuC2I CCSGG 2 cut(s) 33, 51
AsuHPI GGTGA 1 cut(s) 439
AvaI CYCGRG 1 cut(s) 524
AvaII GGWCC 2 cut(s) 357, 896
AxyI CCTNAGG 1 cut(s) 271
BaeGI GKGCMC 1 cut(s) 575
BanI GGYRCC 3 cut(s) 278, 362, 740
BanII GRGCYC 1 cut(s) 423
Bbv12I GWGCWC 1 cut(s) 423
BbvCI CCTCAGC 1 cut(s) 873
BbvI GCAGC 4 cut(s) 297, 371, 424, 856
BccI CCATC 1 cut(s) 650
BceAI ACGGC 1 cut(s) 418
BcgI CGANNNNNNTGC 2 cut(s) 138, 172
BciT130I CCWGG 5 cut(s) 127, 350, 425, 485, 700
BcnI CCSGG 2 cut(s) 33, 51
BcoDI GTCTC 2 cut(s) 92, 521
BfaI CTAG 3 cut(s) 218, 432, 902
BfoI RGCGCY 2 cut(s) 282, 438
BisI GCNGC 8 cut(s) 136, 205, 277, 286, 385, 438, 491, 870
BlsI GCNGC 8 cut(s) 137, 206, 278, 287, 386, 439, 492, 871
Bme1390I CCNGG 7 cut(s) 33, 51, 127, 350, 425, 485, 700
Bme18I GGWCC 2 cut(s) 357, 896
BmeT110I CYCGRG 1 cut(s) 524
BmgBI CACGTC 1 cut(s) 531
BmgT120I GGNCC 3 cut(s) 145, 357, 896
BmiI GGNNCC 8 cut(s) 146, 208, 280, 345, 358, 364, 489, 742
BmrFI CCNGG 7 cut(s) 33, 51, 127, 350, 425, 485, 700
BmsI GCATC 1 cut(s) 856
BpmI CTGGAG 3 cut(s) 71, 148, 407
Bpu10I CCTNAGC 1 cut(s) 873
BpuMI CCSGG 2 cut(s) 33, 51
BsaHI GRCGYC 3 cut(s) 279, 294, 303
BsaI GGTCTC 1 cut(s) 92
BsaJI CCNNGG 4 cut(s) 348, 349, 414, 699
BsaWI WCCGGW 3 cut(s) 173, 209, 227
Bsc4I CCNNNNNNNGG 8 cut(s) 74, 126, 142, 337, 353, 354, 700, 885
Bse118I RCCGGY 4 cut(s) 74, 281, 359, 380
Bse1I ACTGG 2 cut(s) 627, 758
Bse21I CCTNAGG 1 cut(s) 271
BseAI TCCGGA 2 cut(s) 209, 227
BseBI CCWGG 5 cut(s) 127, 350, 425, 485, 700
BseDI CCNNGG 4 cut(s) 348, 349, 414, 699
BseLI CCNNNNNNNGG 8 cut(s) 74, 126, 142, 337, 353, 354, 700, 885
BseMII CTCAG 1 cut(s) 864
BseNI ACTGG 2 cut(s) 627, 758
BseSI GKGCMC 1 cut(s) 575
BseXI GCAGC 4 cut(s) 297, 371, 424, 856
BsgI GTGCAG 1 cut(s) 142
Bsh1236I CGCG 4 cut(s) 258, 470, 512, 581
BshFI GGCC 4 cut(s) 31, 135, 147, 878
BshNI GGYRCC 3 cut(s) 278, 362, 740
BsiHKAI GWGCWC 1 cut(s) 423
BsiHKCI CYCGRG 1 cut(s) 524
BsiSI CCGG 9 cut(s) 32, 51, 75, 174, 210, 228, 282, 360, 381
BsiWI CGTACG 1 cut(s) 513
BslFI GGGAC 3 cut(s) 370, 396, 639
BslI CCNNNNNNNGG 8 cut(s) 74, 126, 142, 337, 353, 354, 700, 885
BsmAI GTCTC 2 cut(s) 92, 521
BsmBI CGTCTC 1 cut(s) 521
BsmFI GGGAC 3 cut(s) 370, 396, 639
BsmI GAATGC 2 cut(s) 36, 227
BsnI GGCC 4 cut(s) 31, 135, 147, 878
Bso31I GGTCTC 1 cut(s) 92
BsoBI CYCGRG 1 cut(s) 524
Bsp1286I GDGCHC 2 cut(s) 423, 575
Bsp13I TCCGGA 2 cut(s) 209, 227
Bsp143I GATC 3 cut(s) 662, 703, 797
BspACI CCGC 8 cut(s) 15, 59, 120, 136, 204, 276, 440, 491
BspANI GGCC 4 cut(s) 31, 135, 147, 878
BspCNI CTCAG 1 cut(s) 865
BspEI TCCGGA 2 cut(s) 209, 227
BspFNI CGCG 4 cut(s) 258, 470, 512, 581
BspLI GGNNCC 8 cut(s) 146, 208, 280, 345, 358, 364, 489, 742
BspPI GGATC 3 cut(s) 670, 711, 805
BspT107I GGYRCC 3 cut(s) 278, 362, 740
BspTNI GGTCTC 1 cut(s) 92
BsrFI RCCGGY 4 cut(s) 74, 281, 359, 380
BsrI ACTGG 2 cut(s) 627, 758
BssAI RCCGGY 4 cut(s) 74, 281, 359, 380
BssECI CCNNGG 4 cut(s) 348, 349, 414, 699
BssMI GATC 3 cut(s) 662, 703, 797
BssNI GRCGYC 3 cut(s) 279, 294, 303
BssT1I CCWWGG 1 cut(s) 414
Bst2UI CCWGG 5 cut(s) 127, 350, 425, 485, 700
Bst4CI ACNGT 3 cut(s) 320, 500, 587
Bst6I CTCTTC 1 cut(s) 830
BstACI GRCGYC 3 cut(s) 279, 294, 303
BstC8I GCNNGC 4 cut(s) 283, 472, 536, 571
BstDEI CTNAG 2 cut(s) 271, 873
BstFNI CGCG 4 cut(s) 258, 470, 512, 581
BstH2I RGCGCY 2 cut(s) 282, 438
BstHHI GCGC 5 cut(s) 260, 281, 437, 470, 512
BstKTI GATC 3 cut(s) 665, 706, 800
BstMAI GTCTC 2 cut(s) 92, 521
BstMBI GATC 3 cut(s) 662, 703, 797
BstMWI GCNNNNNNNGC 8 cut(s) 144, 195, 204, 231, 282, 285, 476, 875
BstNI CCWGG 5 cut(s) 127, 350, 425, 485, 700
BstNSI RCATGY 1 cut(s) 624
BstSCI CCNGG 7 cut(s) 31, 49, 125, 348, 423, 483, 698
BstSLI GKGCMC 1 cut(s) 575
BstUI CGCG 4 cut(s) 258, 470, 512, 581
BstV1I GCAGC 4 cut(s) 297, 371, 424, 856
BstX2I RGATCY 1 cut(s) 797
BstYI RGATCY 1 cut(s) 797
Bsu36I CCTNAGG 1 cut(s) 271
BsuRI GGCC 4 cut(s) 31, 135, 147, 878
BtrI CACGTC 1 cut(s) 531
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 3 cut(s) 30, 634, 839
Cac8I GCNNGC 4 cut(s) 283, 472, 536, 571
CfoI GCGC 5 cut(s) 260, 281, 437, 470, 512
Cfr10I RCCGGY 4 cut(s) 74, 281, 359, 380
Cfr13I GGNCC 3 cut(s) 145, 357, 896
CseI GACGC 1 cut(s) 178
Csp6I GTAC 5 cut(s) 19, 514, 547, 583, 908
CviAII CATG 2 cut(s) 621, 737
CviQI GTAC 5 cut(s) 19, 514, 547, 583, 908
DdeI CTNAG 2 cut(s) 271, 873
DinI GGCGCC 1 cut(s) 280
DpnI GATC 3 cut(s) 664, 705, 799
DpnII GATC 3 cut(s) 662, 703, 797
EaeI YGGCCR 1 cut(s) 29
Eam1104I CTCTTC 1 cut(s) 830
EarI CTCTTC 1 cut(s) 830
Ecl136II GAGCTC 1 cut(s) 421
Eco130I CCWWGG 1 cut(s) 414
Eco147I AGGCCT 1 cut(s) 878
Eco24I GRGCYC 1 cut(s) 423
Eco31I GGTCTC 1 cut(s) 92
Eco47I GGWCC 2 cut(s) 357, 896
Eco47III AGCGCT 1 cut(s) 436
Eco53kI GAGCTC 1 cut(s) 421
Eco81I CCTNAGG 1 cut(s) 271
Eco88I CYCGRG 1 cut(s) 524
EcoICRI GAGCTC 1 cut(s) 421
EcoRII CCWGG 5 cut(s) 125, 348, 423, 483, 698
EcoT14I CCWWGG 1 cut(s) 414
EcoT38I GRGCYC 1 cut(s) 423
EgeI GGCGCC 1 cut(s) 280
EheI GGCGCC 1 cut(s) 280
ErhI CCWWGG 1 cut(s) 414
Esp3I CGTCTC 1 cut(s) 521
FaeI CATG 2 cut(s) 624, 740
FaiI YATR 5 cut(s) 335, 595, 622, 738, 773
FalI AAGNNNNNCTT 2 cut(s) 599, 631
FaqI GGGAC 3 cut(s) 370, 396, 639
FatI CATG 2 cut(s) 620, 736
FauI CCCGC 3 cut(s) 8, 127, 433
FblI GTMKAC 2 cut(s) 315, 393
Fnu4HI GCNGC 8 cut(s) 136, 205, 277, 286, 385, 438, 491, 870
FriOI GRGCYC 1 cut(s) 423
Fsp4HI GCNGC 8 cut(s) 136, 205, 277, 286, 385, 438, 491, 870
FspBI CTAG 3 cut(s) 218, 432, 902
GlaI GCGC 5 cut(s) 259, 280, 436, 469, 511
GluI GCNGC 8 cut(s) 136, 205, 277, 286, 385, 438, 491, 870
GsuI CTGGAG 3 cut(s) 71, 148, 407
HaeII RGCGCY 2 cut(s) 282, 438
HaeIII GGCC 4 cut(s) 31, 135, 147, 878
HapII CCGG 9 cut(s) 32, 51, 75, 174, 210, 228, 282, 360, 381
HgaI GACGC 1 cut(s) 178
HhaI GCGC 5 cut(s) 260, 281, 437, 470, 512
Hin1I GRCGYC 3 cut(s) 279, 294, 303
Hin1II CATG 2 cut(s) 624, 740
Hin6I GCGC 5 cut(s) 258, 279, 435, 468, 510
HinP1I GCGC 5 cut(s) 258, 279, 435, 468, 510
HincII GTYRAC 2 cut(s) 316, 394
HindII GTYRAC 2 cut(s) 316, 394
HinfI GANTC 2 cut(s) 167, 680
HpaII CCGG 9 cut(s) 32, 51, 75, 174, 210, 228, 282, 360, 381
HphI GGTGA 1 cut(s) 439
Hpy166II GTNNAC 3 cut(s) 7, 316, 394
Hpy188I TCNGA 2 cut(s) 69, 888
Hpy188III TCNNGA 4 cut(s) 88, 210, 228, 562
Hpy8I GTNNAC 3 cut(s) 7, 316, 394
Hpy99I CGWCG 5 cut(s) 317, 320, 458, 602, 679
HpyAV CCTTC 2 cut(s) 559, 889
HpyCH4III ACNGT 3 cut(s) 320, 500, 587
HpyCH4IV ACGT 3 cut(s) 294, 303, 530
HpyCH4V TGCA 5 cut(s) 159, 462, 504, 534, 794
HpyF10VI GCNNNNNNNGC 8 cut(s) 144, 195, 204, 231, 282, 285, 476, 875
HpyF3I CTNAG 2 cut(s) 271, 873
HpySE526I ACGT 3 cut(s) 294, 303, 530
Hsp92I GRCGYC 3 cut(s) 279, 294, 303
Hsp92II CATG 2 cut(s) 624, 740
HspAI GCGC 5 cut(s) 258, 279, 435, 468, 510
KasI GGCGCC 1 cut(s) 278
Kpn2I TCCGGA 2 cut(s) 209, 227
KroI GCCGGC 1 cut(s) 281
KroNI GCCGGC 1 cut(s) 283
Kzo9I GATC 3 cut(s) 662, 703, 797
LmnI GCTCC 5 cut(s) 212, 230, 418, 426, 487
Lsp1109I GCAGC 4 cut(s) 297, 371, 424, 856
LweI GCATC 1 cut(s) 856
MaeI CTAG 3 cut(s) 218, 432, 902
MaeII ACGT 3 cut(s) 294, 303, 530
MaeIII GTNAC 7 cut(s) 190, 250, 320, 371, 427, 587, 784
MalI GATC 3 cut(s) 664, 705, 799
MboI GATC 3 cut(s) 662, 703, 797
MboII GAAGA 2 cut(s) 817, 875
MfeI CAATTG 2 cut(s) 367, 729
MflI RGATCY 1 cut(s) 797
MhlI GDGCHC 2 cut(s) 423, 575
MluCI AATT 5 cut(s) 367, 634, 715, 729, 920
MluI ACGCGT 1 cut(s) 579
Mly113I GGCGCC 1 cut(s) 279
MlyI GAGTC 1 cut(s) 161
MmeI TCCRAC 2 cut(s) 92, 812
MroI TCCGGA 2 cut(s) 209, 227
MroNI GCCGGC 1 cut(s) 281
MroXI GAANNNNTTC 1 cut(s) 614
MseI TTAA 1 cut(s) 399
MspI CCGG 9 cut(s) 32, 51, 75, 174, 210, 228, 282, 360, 381
MspR9I CCNGG 7 cut(s) 33, 51, 127, 350, 425, 485, 700
MunI CAATTG 2 cut(s) 367, 729
Mva1269I GAATGC 2 cut(s) 36, 227
MvaI CCWGG 5 cut(s) 127, 350, 425, 485, 700
MvnI CGCG 4 cut(s) 258, 470, 512, 581
MwoI GCNNNNNNNGC 8 cut(s) 144, 195, 204, 231, 282, 285, 476, 875
NaeI GCCGGC 1 cut(s) 283
NarI GGCGCC 1 cut(s) 279
NciI CCSGG 2 cut(s) 33, 51
NdeII GATC 3 cut(s) 662, 703, 797
NgoMIV GCCGGC 1 cut(s) 281
NlaIII CATG 2 cut(s) 624, 740
NlaIV GGNNCC 8 cut(s) 146, 208, 280, 345, 358, 364, 489, 742
NmeAIII GCCGAG 1 cut(s) 286
NmuCI GTSAC 3 cut(s) 190, 427, 784
NspI RCATGY 1 cut(s) 624
PasI CCCWGGG 1 cut(s) 349
PceI AGGCCT 1 cut(s) 878
PcsI WCGNNNNNNNCGW 5 cut(s) 300, 309, 522, 671, 680
PctI GAATGC 2 cut(s) 36, 227
PdiI GCCGGC 1 cut(s) 283
PdmI GAANNNNTTC 1 cut(s) 614
PfeI GAWTC 1 cut(s) 680
Pfl23II CGTACG 1 cut(s) 513
PfoI TCCNGGA 2 cut(s) 125, 483
PkrI GCNGC 8 cut(s) 137, 206, 278, 287, 386, 439, 492, 871
PleI GAGTC 1 cut(s) 161
PluTI GGCGCC 1 cut(s) 282
PpsI GAGTC 1 cut(s) 161
Psp124BI GAGCTC 1 cut(s) 423
Psp6I CCWGG 5 cut(s) 125, 348, 423, 483, 698
PspGI CCWGG 5 cut(s) 125, 348, 423, 483, 698
PspLI CGTACG 1 cut(s) 513
PspN4I GGNNCC 8 cut(s) 146, 208, 280, 345, 358, 364, 489, 742
PspPI GGNCC 3 cut(s) 145, 357, 896
PsuI RGATCY 1 cut(s) 797
RsaI GTAC 5 cut(s) 20, 515, 548, 584, 909
RsaNI GTAC 5 cut(s) 19, 514, 547, 583, 908
SacI GAGCTC 1 cut(s) 423
SalI GTCGAC 2 cut(s) 314, 392
SaqAI TTAA 1 cut(s) 399
SatI GCNGC 8 cut(s) 136, 205, 277, 286, 385, 438, 491, 870
Sau3AI GATC 3 cut(s) 662, 703, 797
Sau96I GGNCC 3 cut(s) 145, 357, 896
SchI GAGTC 1 cut(s) 161
ScrFI CCNGG 7 cut(s) 33, 51, 127, 350, 425, 485, 700
SduI GDGCHC 2 cut(s) 423, 575
SfaNI GCATC 1 cut(s) 856
SfoI GGCGCC 1 cut(s) 280
SgrDI CGTCGACG 1 cut(s) 314
SinI GGWCC 2 cut(s) 357, 896
Sse9I AATT 5 cut(s) 367, 634, 715, 729, 920
SseBI AGGCCT 1 cut(s) 878
SsiI CCGC 8 cut(s) 15, 59, 120, 136, 204, 276, 440, 491
SspDI GGCGCC 1 cut(s) 278
SspI AATATT 1 cut(s) 558
SspMI CTAG 3 cut(s) 218, 432, 902
SstI GAGCTC 1 cut(s) 423
StuI AGGCCT 1 cut(s) 878
StyD4I CCNGG 7 cut(s) 31, 49, 125, 348, 423, 483, 698
StyI CCWWGG 1 cut(s) 414
TaaI ACNGT 3 cut(s) 320, 500, 587
TaiI ACGT 3 cut(s) 297, 306, 533
TaqI TCGA 3 cut(s) 315, 393, 665
TasI AATT 5 cut(s) 367, 634, 715, 729, 920
TatI WGTACW 1 cut(s) 907
TauI GCSGC 4 cut(s) 138, 207, 279, 493
TfiI GAWTC 1 cut(s) 680
Tru1I TTAA 1 cut(s) 399
Tru9I TTAA 1 cut(s) 399
TscAI CASTG 3 cut(s) 30, 634, 846
TseFI GTSAC 3 cut(s) 190, 427, 784
TseI GCWGC 4 cut(s) 285, 384, 437, 869
Tsp45I GTSAC 3 cut(s) 190, 427, 784
TspDTI ATGAA 3 cut(s) 725, 760, 876
TspGWI ACGGA 2 cut(s) 692, 818
TspRI CASTG 3 cut(s) 30, 634, 846
VpaK11BI GGWCC 2 cut(s) 357, 896
XapI RAATTY 1 cut(s) 920
XceI RCATGY 1 cut(s) 624
XmiI GTMKAC 2 cut(s) 315, 393
XmnI GAANNNNTTC 1 cut(s) 614
XspI CTAG 3 cut(s) 218, 432, 902
ZraI GACGTC 2 cut(s) 295, 304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.