Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010107

Physical Location & Seq

Genomic Coordinates Reverse (-)

35253708 .. 35254845

Gene Structure 1138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G398300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGTGTCCAACAACCAAGCAAAAGCATCGGAACTCCGTCGCCGATCACGTCGGAAAATGCTCCAGATCCGACGAGTCCACAACTACCACCGCCGATTGGATCTCCGAGTCCATCCACAGTGGATCACTGCGCCACGTGGACCTCACCACCGGAACCAATGGCTGGGCCTCACCTCCCGGCGACCTATTCTCTCTCCGCACAAAGAACTACTTGACGAAAAAGCAAAAAGGCCCCGCCGGCGACTACCTACTCACGCCGTGCGGCACAGACTGGCTCAGATCCAGCACCAAACTCGACAACGTACTCGCTCGCCCCGATAACCGCGTGGCCAACGCGTTGCGGAAGGCCCAGGCACAAGGCAAGTCCATGAAGAGCTTCATTTTCGCGGTGAATCTACAAGTCCCCGGTAAGGACCAGCACAGCGCGGTGTTCTACTTCGCCACAGAGGATCCTATCCCCTCCAGTTCGCTCCTATACCGGTTCATCAACGGGGATGACTCGTTCAGGAACCAGCGGTTCAAGATCGTGAATCGGATTGTGAAAGGGCCGTGGATCGTCGAGAAGACGGTGGGGAATTACAGTGCGTGTTTGTTGGGGAAGGCGCTGACGTGTAATTACCATAGAGGACCTAACTACCTTGAAATTGACGTGGATATCGCGAGCTCGGGGATCGCCAAGGCCATTCTGAGACTCGCATTGAGATACGTGACGAGCGTAACGATTGACATGGGGTTTGTGGTGGAGGGGCAGGCAGAGGATGAGCTGCCCGAGAAGTTAGTCGGCGCGGTCAGGGTTTGCCAGATGGAGATGTCGTCGGCGACGGTGGTGGACGCGCCGCATGGTCCAGCCGCAGTGCGTGGACTGAGCTTTGCGAAGGTGAATCATCATAAGTCCGGCGACGACGACGACGACGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1336

Protein Analysis

306

Amino Acids

33.4

Weight (kDa)

8.44

Isoelectric Point (pI)

30.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10750
fragaria_vesca	FvH4_2g41380
malus_domestica	MD08G1050500.v1.1 MD11G1259000.v1.1 MD15G1044400.v1.1
prunus_persica	Prupe.1G398300_v2.0.a1
pyrus_communis	pycom08g04180
rosa_chinensis	RchiOBHm_Chr6g0299091
rosa_laevigata	RLG00000011462 RLG00000033871
rosa_multiflora	Rmu_sc0005120.1_g000010 Rmu_sc0007483.1_g000003
rosa_roxburghii	Rroxscaffold_7G00169010
rosa_rugosa	Rorug06G0285300
rosa_samantha	Rh2CG134900 Rh2DG135400 Rh5CG299000 Rh6AG396200 Rh6CG410800 Rh6DG397400
rosa_wichuraiana	Rw6G034690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	162
AccII	CGCG	7 cut(s)	324, 335, 386, 425, 659, 785, 833
AclWI	GGATC	8 cut(s)	60, 107, 130, 273, 443, 456, 560, 677
AcoI	YGGCCR	1 cut(s)	327
AcvI	CACGTG	1 cut(s)	136
AdeI	CACNNNGTG	1 cut(s)	258
AfaI	GTAC	1 cut(s)	303
AfiI	CCNNNNNNNGG	3 cut(s)	96, 162, 409
AflIII	ACRYGT	2 cut(s)	333, 608
AgeI	ACCGGT	1 cut(s)	477
AgsI	TTSAA	2 cut(s)	520, 641
AjiI	CACGTC	3 cut(s)	49, 609, 649
AjnI	CCWGG	1 cut(s)	348
AloI	GAACNNNNNNTCC	2 cut(s)	485, 517
AluBI	AGCT	4 cut(s)	375, 663, 763, 867
AluI	AGCT	4 cut(s)	375, 663, 763, 867
Alw21I	GWGCWC	1 cut(s)	665
Alw26I	GTCTC	1 cut(s)	682
AlwI	GGATC	8 cut(s)	60, 107, 130, 273, 443, 456, 560, 677
Ama87I	CYCGRG	2 cut(s)	664, 767
AoxI	GGCC	6 cut(s)	165, 229, 327, 345, 545, 678
ApeKI	GCWGC	1 cut(s)	763
ArsI	GACNNNNNNTTYG	2 cut(s)	716, 748
AsiGI	ACCGGT	1 cut(s)	477
Asp700I	GAANNNNTTC	1 cut(s)	374
AspLEI	GCGC	5 cut(s)	132, 425, 604, 785, 835
AspS9I	GGNCC	8 cut(s)	139, 165, 230, 346, 412, 545, 626, 842
AsuC2I	CCSGG	2 cut(s)	177, 405
AsuHPI	GGTGA	4 cut(s)	136, 162, 400, 889
AvaI	CYCGRG	2 cut(s)	664, 767
AvaII	GGWCC	4 cut(s)	139, 412, 626, 842
BalI	TGGCCA	1 cut(s)	329
BamHI	GGATCC	1 cut(s)	448
BanII	GRGCYC	1 cut(s)	665
BbrPI	CACGTG	1 cut(s)	136
BbsI	GAAGAC	1 cut(s)	569
Bbv12I	GWGCWC	1 cut(s)	665
BbvI	GCAGC	1 cut(s)	750
BccI	CCATC	2 cut(s)	119, 796
BceAI	ACGGC	2 cut(s)	241, 532
BcgI	CGANNNNNNTGC	4 cut(s)	8, 42, 274, 308
BciT130I	CCWGG	1 cut(s)	350
BcnI	CCSGG	2 cut(s)	177, 405
BcoDI	GTCTC	1 cut(s)	682
BfoI	RGCGCY	1 cut(s)	605
BglI	GCCNNNNNGGC	1 cut(s)	237
BisI	GCNGC	4 cut(s)	262, 764, 836, 849
BlsI	GCNGC	4 cut(s)	263, 765, 837, 850
Bme1390I	CCNGG	3 cut(s)	177, 350, 405
Bme18I	GGWCC	4 cut(s)	139, 412, 626, 842
BmeT110I	CYCGRG	2 cut(s)	664, 767
BmgBI	CACGTC	3 cut(s)	49, 609, 649
BmgT120I	GGNCC	8 cut(s)	139, 165, 230, 346, 412, 545, 626, 842
BmiI	GGNNCC	4 cut(s)	154, 232, 450, 509
BmrFI	CCNGG	3 cut(s)	177, 350, 405
BmsI	GCATC	1 cut(s)	34
BpiI	GAAGAC	1 cut(s)	569
BpmI	CTGGAG	2 cut(s)	46, 445
BpuMI	CCSGG	2 cut(s)	177, 405
BsaAI	YACGTR	2 cut(s)	136, 706
BsaJI	CCNNGG	4 cut(s)	348, 403, 548, 675
BsaWI	WCCGGW	2 cut(s)	149, 477
BsaXI	ACNNNNNCTCC	2 cut(s)	797, 827
Bsc4I	CCNNNNNNNGG	3 cut(s)	96, 162, 409
Bse118I	RCCGGY	2 cut(s)	236, 477
Bse1I	ACTGG	2 cut(s)	275, 462
BseBI	CCWGG	1 cut(s)	350
BseDI	CCNNGG	4 cut(s)	348, 403, 548, 675
BseGI	GGATG	3 cut(s)	111, 499, 763
BseLI	CCNNNNNNNGG	3 cut(s)	96, 162, 409
BseMII	CTCAG	3 cut(s)	289, 677, 854
BseNI	ACTGG	2 cut(s)	275, 462
BseXI	GCAGC	1 cut(s)	750
BseYI	CCCAGC	1 cut(s)	162
Bsh1236I	CGCG	7 cut(s)	324, 335, 386, 425, 659, 785, 833
BshFI	GGCC	6 cut(s)	167, 231, 329, 347, 547, 680
BshTI	ACCGGT	1 cut(s)	477
BsiHKAI	GWGCWC	1 cut(s)	665
BsiHKCI	CYCGRG	2 cut(s)	664, 767
BsiSI	CCGG	6 cut(s)	150, 177, 237, 405, 478, 894
BslFI	GGGAC	1 cut(s)	386
BslI	CCNNNNNNNGG	3 cut(s)	96, 162, 409
BsmAI	GTCTC	1 cut(s)	682
BsmFI	GGGAC	1 cut(s)	386
BsnI	GGCC	6 cut(s)	167, 231, 329, 347, 547, 680
BsoBI	CYCGRG	2 cut(s)	664, 767
Bsp1286I	GDGCHC	1 cut(s)	665
Bsp143I	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
Bsp68I	TCGCGA	1 cut(s)	659
BspANI	GGCC	6 cut(s)	167, 231, 329, 347, 547, 680
BspCNI	CTCAG	3 cut(s)	288, 678, 855
BspFNI	CGCG	7 cut(s)	324, 335, 386, 425, 659, 785, 833
BspLI	GGNNCC	4 cut(s)	154, 232, 450, 509
BspPI	GGATC	8 cut(s)	60, 107, 130, 273, 443, 456, 560, 677
BspQI	GCTCTTC	1 cut(s)	365
BsrFI	RCCGGY	2 cut(s)	236, 477
BsrI	ACTGG	2 cut(s)	275, 462
BssAI	RCCGGY	2 cut(s)	236, 477
BssECI	CCNNGG	4 cut(s)	348, 403, 548, 675
BssMI	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
BssT1I	CCWWGG	1 cut(s)	675
Bst2UI	CCWGG	1 cut(s)	350
Bst4CI	ACNGT	4 cut(s)	119, 568, 581, 823
Bst6I	CTCTTC	1 cut(s)	365
BstBAI	YACGTR	2 cut(s)	136, 706
BstC8I	GCNNGC	4 cut(s)	238, 310, 661, 750
BstDEI	CTNAG	3 cut(s)	275, 686, 863
BstDSI	CCRYGG	1 cut(s)	548
BstF5I	GGATG	3 cut(s)	111, 499, 763
BstFNI	CGCG	7 cut(s)	324, 335, 386, 425, 659, 785, 833
BstH2I	RGCGCY	1 cut(s)	605
BstHHI	GCGC	5 cut(s)	132, 425, 604, 785, 835
BstKTI	GATC	9 cut(s)	46, 68, 102, 125, 281, 451, 525, 555, 672
BstMAI	GTCTC	1 cut(s)	682
BstMBI	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
BstMWI	GCNNNNNNNGC	1 cut(s)	237
BstNI	CCWGG	1 cut(s)	350
BstSCI	CCNGG	3 cut(s)	175, 348, 403
BstUI	CGCG	7 cut(s)	324, 335, 386, 425, 659, 785, 833
BstV1I	GCAGC	1 cut(s)	750
BstV2I	GAAGAC	1 cut(s)	569
BstX2I	RGATCY	4 cut(s)	65, 99, 278, 448
BstYI	RGATCY	4 cut(s)	65, 99, 278, 448
BsuRI	GGCC	6 cut(s)	167, 231, 329, 347, 547, 680
BtgI	CCRYGG	1 cut(s)	548
BtrI	CACGTC	3 cut(s)	49, 609, 649
BtsCI	GGATG	3 cut(s)	111, 499, 763
BtsI	GCAGTG	2 cut(s)	125, 858
BtsIMutI	CAGTG	4 cut(s)	124, 125, 586, 858
BtuMI	TCGCGA	1 cut(s)	659
Cac8I	GCNNGC	4 cut(s)	238, 310, 661, 750
CfoI	GCGC	5 cut(s)	132, 425, 604, 785, 835
Cfr10I	RCCGGY	2 cut(s)	236, 477
Cfr13I	GGNCC	8 cut(s)	139, 165, 230, 346, 412, 545, 626, 842
CseI	GACGC	1 cut(s)	839
Csp6I	GTAC	1 cut(s)	302
CspAI	ACCGGT	1 cut(s)	477
CviAII	CATG	3 cut(s)	367, 727, 839
CviQI	GTAC	1 cut(s)	302
DdeI	CTNAG	3 cut(s)	275, 686, 863
DpnI	GATC	9 cut(s)	45, 67, 101, 124, 280, 450, 524, 554, 671
DpnII	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
DraIII	CACNNNGTG	1 cut(s)	258
EaeI	YGGCCR	1 cut(s)	327
Eam1104I	CTCTTC	1 cut(s)	365
EarI	CTCTTC	1 cut(s)	365
Ecl136II	GAGCTC	1 cut(s)	663
Eco130I	CCWWGG	1 cut(s)	675
Eco24I	GRGCYC	1 cut(s)	665
Eco32I	GATATC	1 cut(s)	655
Eco47I	GGWCC	4 cut(s)	139, 412, 626, 842
Eco53kI	GAGCTC	1 cut(s)	663
Eco72I	CACGTG	1 cut(s)	136
Eco88I	CYCGRG	2 cut(s)	664, 767
EcoICRI	GAGCTC	1 cut(s)	663
EcoO109I	RGGNCCY	2 cut(s)	230, 626
EcoRII	CCWGG	1 cut(s)	348
EcoRV	GATATC	1 cut(s)	655
EcoT14I	CCWWGG	1 cut(s)	675
EcoT38I	GRGCYC	1 cut(s)	665
ErhI	CCWWGG	1 cut(s)	675
FaeI	CATG	3 cut(s)	370, 730, 842
FaiI	YATR	6 cut(s)	368, 475, 621, 728, 840, 888
FalI	AAGNNNNNCTT	2 cut(s)	194, 226
FaqI	GGGAC	1 cut(s)	386
FatI	CATG	3 cut(s)	366, 726, 838
FauI	CCCGC	1 cut(s)	241
Fnu4HI	GCNGC	4 cut(s)	262, 764, 836, 849
FokI	GGATG	3 cut(s)	98, 506, 770
FriOI	GRGCYC	1 cut(s)	665
Fsp4HI	GCNGC	4 cut(s)	262, 764, 836, 849
GlaI	GCGC	5 cut(s)	131, 424, 603, 784, 834
GluI	GCNGC	4 cut(s)	262, 764, 836, 849
GsaI	CCCAGC	1 cut(s)	166
GsuI	CTGGAG	2 cut(s)	46, 445
HaeII	RGCGCY	1 cut(s)	605
HaeIII	GGCC	6 cut(s)	167, 231, 329, 347, 547, 680
HapII	CCGG	6 cut(s)	150, 177, 237, 405, 478, 894
HgaI	GACGC	1 cut(s)	839
HhaI	GCGC	5 cut(s)	132, 425, 604, 785, 835
Hin1II	CATG	3 cut(s)	370, 730, 842
Hin6I	GCGC	5 cut(s)	130, 423, 602, 783, 833
HinP1I	GCGC	5 cut(s)	130, 423, 602, 783, 833
HinfI	GANTC	7 cut(s)	74, 107, 391, 497, 529, 690, 880
HpaII	CCGG	6 cut(s)	150, 177, 237, 405, 478, 894
HphI	GGTGA	4 cut(s)	136, 162, 400, 889
Hpy166II	GTNNAC	4 cut(s)	78, 139, 829, 860
Hpy188I	TCNGA	7 cut(s)	30, 53, 70, 106, 278, 534, 687
Hpy188III	TCNNGA	6 cut(s)	63, 505, 520, 526, 559, 658
Hpy8I	GTNNAC	4 cut(s)	78, 139, 829, 860
HpyAV	CCTTC	3 cut(s)	337, 592, 868
HpyCH4III	ACNGT	4 cut(s)	119, 568, 581, 823
HpyCH4IV	ACGT	6 cut(s)	48, 135, 300, 608, 648, 705
HpyF10VI	GCNNNNNNNGC	1 cut(s)	237
HpyF3I	CTNAG	3 cut(s)	275, 686, 863
HpySE526I	ACGT	6 cut(s)	48, 135, 300, 608, 648, 705
Hsp92II	CATG	3 cut(s)	370, 730, 842
HspAI	GCGC	5 cut(s)	130, 423, 602, 783, 833
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
Kzo9I	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
LguI	GCTCTTC	1 cut(s)	365
LmnI	GCTCC	2 cut(s)	65, 474
Lsp1109I	GCAGC	1 cut(s)	750
LweI	GCATC	1 cut(s)	34
MaeII	ACGT	6 cut(s)	48, 135, 300, 608, 648, 705
MaeIII	GTNAC	2 cut(s)	706, 715
MalI	GATC	9 cut(s)	45, 67, 101, 124, 280, 450, 524, 554, 671
MboI	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
MboII	GAAGA	2 cut(s)	382, 574
MflI	RGATCY	4 cut(s)	65, 99, 278, 448
MhlI	GDGCHC	1 cut(s)	665
MlsI	TGGCCA	1 cut(s)	329
MluCI	AATT	3 cut(s)	574, 613, 642
MluI	ACGCGT	1 cut(s)	333
MluNI	TGGCCA	1 cut(s)	329
MlyI	GAGTC	4 cut(s)	83, 116, 491, 684
MmeI	TCCRAC	3 cut(s)	31, 32, 93
MnlI	CCTC	8 cut(s)	152, 178, 183, 439, 469, 617, 736, 748
Mox20I	TGGCCA	1 cut(s)	329
MreI	CGCCGGCG	1 cut(s)	236
MroNI	GCCGGC	1 cut(s)	236
MroXI	GAANNNNTTC	1 cut(s)	374
MscI	TGGCCA	1 cut(s)	329
Msp20I	TGGCCA	1 cut(s)	329
MspA1I	CMGCKG	1 cut(s)	514
MspI	CCGG	6 cut(s)	150, 177, 237, 405, 478, 894
MspR9I	CCNGG	3 cut(s)	177, 350, 405
MvaI	CCWGG	1 cut(s)	350
MvnI	CGCG	7 cut(s)	324, 335, 386, 425, 659, 785, 833
MwoI	GCNNNNNNNGC	1 cut(s)	237
NaeI	GCCGGC	1 cut(s)	238
NciI	CCSGG	2 cut(s)	177, 405
NdeII	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
NgoMIV	GCCGGC	1 cut(s)	236
NlaIII	CATG	3 cut(s)	370, 730, 842
NlaIV	GGNNCC	4 cut(s)	154, 232, 450, 509
NmuCI	GTSAC	1 cut(s)	706
NruI	TCGCGA	1 cut(s)	659
PciSI	GCTCTTC	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	6 cut(s)	45, 312, 711, 716, 906, 909
PdiI	GCCGGC	1 cut(s)	238
PdmI	GAANNNNTTC	1 cut(s)	374
PfeI	GAWTC	3 cut(s)	391, 529, 880
PflMI	CCANNNNNTGG	1 cut(s)	162
PinAI	ACCGGT	1 cut(s)	477
PkrI	GCNGC	4 cut(s)	263, 765, 837, 850
PleI	GAGTC	4 cut(s)	82, 115, 491, 684
PmaCI	CACGTG	1 cut(s)	136
PmlI	CACGTG	1 cut(s)	136
PpsI	GAGTC	4 cut(s)	82, 115, 491, 684
Ppu21I	YACGTR	2 cut(s)	136, 706
PpuMI	RGGWCCY	1 cut(s)	626
Psp124BI	GAGCTC	1 cut(s)	665
Psp5II	RGGWCCY	1 cut(s)	626
Psp6I	CCWGG	1 cut(s)	348
PspCI	CACGTG	1 cut(s)	136
PspFI	CCCAGC	1 cut(s)	162
PspGI	CCWGG	1 cut(s)	348
PspN4I	GGNNCC	4 cut(s)	154, 232, 450, 509
PspPI	GGNCC	8 cut(s)	139, 165, 230, 346, 412, 545, 626, 842
PspPPI	RGGWCCY	1 cut(s)	626
PsuI	RGATCY	4 cut(s)	65, 99, 278, 448
RruI	TCGCGA	1 cut(s)	659
RsaI	GTAC	1 cut(s)	303
RsaNI	GTAC	1 cut(s)	302
SacI	GAGCTC	1 cut(s)	665
SapI	GCTCTTC	1 cut(s)	365
SatI	GCNGC	4 cut(s)	262, 764, 836, 849
Sau3AI	GATC	9 cut(s)	43, 65, 99, 122, 278, 448, 522, 552, 669
Sau96I	GGNCC	8 cut(s)	139, 165, 230, 346, 412, 545, 626, 842
SchI	GAGTC	4 cut(s)	83, 116, 491, 684
ScrFI	CCNGG	3 cut(s)	177, 350, 405
SduI	GDGCHC	1 cut(s)	665
SfaNI	GCATC	1 cut(s)	34
SgrAI	CRCCGGYG	1 cut(s)	236
SinI	GGWCC	4 cut(s)	139, 412, 626, 842
Sse9I	AATT	3 cut(s)	574, 613, 642
SstI	GAGCTC	1 cut(s)	665
StyD4I	CCNGG	3 cut(s)	175, 348, 403
StyI	CCWWGG	1 cut(s)	675
TaaI	ACNGT	4 cut(s)	119, 568, 581, 823
TaiI	ACGT	6 cut(s)	51, 138, 303, 611, 651, 708
TaqI	TCGA	2 cut(s)	294, 558
TasI	AATT	3 cut(s)	574, 613, 642
TauI	GCSGC	3 cut(s)	264, 838, 851
TfiI	GAWTC	3 cut(s)	391, 529, 880
TscAI	CASTG	4 cut(s)	124, 132, 586, 858
TseFI	GTSAC	1 cut(s)	706
TseI	GCWGC	1 cut(s)	763
Tsp45I	GTSAC	1 cut(s)	706
TspDTI	ATGAA	3 cut(s)	367, 383, 472
TspGWI	ACGGA	1 cut(s)	25
TspRI	CASTG	4 cut(s)	124, 132, 586, 858
Van91I	CCANNNNNTGG	1 cut(s)	162
VpaK11BI	GGWCC	4 cut(s)	139, 412, 626, 842
XmnI	GAANNNNTTC	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.