Rorug06G0285300

Protein ENHANCED DISEASE RESISTANCE 2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
43421630 .. 43430879
9250 bp
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UTR
Exon/CDS
Intron
Rorug06G0285300.1

Sequence Viewer

Length: 195 bp
ATGAGACTAACAGAAACTGTCATCTTGTGGCTTTCCGAAGATCAAAGCTTTTGGGATGATATTGAGGATGGGCCAAGGCCTTTGGGTCCTTTTGGCTTACAACAGTGGGCGGTAAAGGATCGGAAATGGTATACCCAACAACAACTTGACGAGGTCCGCATTGAAGTAGCCGACTACTTACAGACTCTGCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

7.68

Weight (kDa)

4.24

Isoelectric Point (pI)

66.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 131
AciI CCGC 2 cut(s) 110, 157
AclWI GGATC 1 cut(s) 126
AgsI TTSAA 1 cut(s) 164
AluBI AGCT 1 cut(s) 48
AluI AGCT 1 cut(s) 48
AlwI GGATC 1 cut(s) 126
AlwNI CAGNNNCTG 2 cut(s) 17, 187
AoxI GGCC 2 cut(s) 71, 77
AspS9I GGNCC 3 cut(s) 71, 86, 154
AvaII GGWCC 2 cut(s) 86, 154
BccI CCATC 1 cut(s) 62
BfmI CTRYAG 1 cut(s) 191
Bme18I GGWCC 2 cut(s) 86, 154
BmgT120I GGNCC 3 cut(s) 71, 86, 154
BmiI GGNNCC 1 cut(s) 87
BsaJI CCNNGG 1 cut(s) 74
BseDI CCNNGG 1 cut(s) 74
BseGI GGATG 2 cut(s) 61, 73
BshFI GGCC 2 cut(s) 73, 79
BsnI GGCC 2 cut(s) 73, 79
Bsp143I GATC 2 cut(s) 40, 118
BspACI CCGC 2 cut(s) 110, 157
BspANI GGCC 2 cut(s) 73, 79
BspLI GGNNCC 1 cut(s) 87
BspPI GGATC 1 cut(s) 126
BssECI CCNNGG 1 cut(s) 74
BssMI GATC 2 cut(s) 40, 118
BssNAI GTATAC 1 cut(s) 132
BssT1I CCWWGG 1 cut(s) 74
Bst1107I GTATAC 1 cut(s) 132
Bst4CI ACNGT 2 cut(s) 19, 105
BstF5I GGATG 2 cut(s) 61, 73
BstKTI GATC 2 cut(s) 43, 121
BstMBI GATC 2 cut(s) 40, 118
BstSFI CTRYAG 1 cut(s) 191
BstZ17I GTATAC 1 cut(s) 132
BsuRI GGCC 2 cut(s) 73, 79
BtsCI GGATG 2 cut(s) 61, 73
BtsIMutI CAGTG 1 cut(s) 110
CaiI CAGNNNCTG 2 cut(s) 17, 187
Cfr13I GGNCC 3 cut(s) 71, 86, 154
CviJI RGCY 6 cut(s) 31, 48, 73, 79, 96, 170
CviKI_1 RGCY 6 cut(s) 31, 48, 73, 79, 96, 170
DpnI GATC 2 cut(s) 42, 120
DpnII GATC 2 cut(s) 40, 118
Eco130I CCWWGG 1 cut(s) 74
Eco147I AGGCCT 1 cut(s) 79
Eco47I GGWCC 2 cut(s) 86, 154
EcoO109I RGGNCCY 1 cut(s) 86
EcoT14I CCWWGG 1 cut(s) 74
ErhI CCWWGG 1 cut(s) 74
FaiI YATR 1 cut(s) 132
FblI GTMKAC 1 cut(s) 131
FokI GGATG 2 cut(s) 68, 80
HaeIII GGCC 2 cut(s) 73, 79
HindIII AAGCTT 1 cut(s) 46
HinfI GANTC 1 cut(s) 184
Hpy166II GTNNAC 1 cut(s) 132
Hpy188I TCNGA 2 cut(s) 37, 123
Hpy8I GTNNAC 1 cut(s) 132
HpyCH4III ACNGT 2 cut(s) 19, 105
Kzo9I GATC 2 cut(s) 40, 118
MalI GATC 2 cut(s) 42, 120
MboI GATC 2 cut(s) 40, 118
MboII GAAGA 1 cut(s) 50
MlyI GAGTC 1 cut(s) 178
MnlI CCTC 2 cut(s) 58, 145
NdeII GATC 2 cut(s) 40, 118
NlaIV GGNNCC 1 cut(s) 87
PceI AGGCCT 1 cut(s) 79
PflFI GACNNNGTC 1 cut(s) 152
PleI GAGTC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 178
PpuMI RGGWCCY 1 cut(s) 86
Psp5II RGGWCCY 1 cut(s) 86
PspN4I GGNNCC 1 cut(s) 87
PspPI GGNCC 3 cut(s) 71, 86, 154
PspPPI RGGWCCY 1 cut(s) 86
PstNI CAGNNNCTG 2 cut(s) 17, 187
PsyI GACNNNGTC 1 cut(s) 152
Sau3AI GATC 2 cut(s) 40, 118
Sau96I GGNCC 3 cut(s) 71, 86, 154
SchI GAGTC 1 cut(s) 178
SetI ASST 2 cut(s) 50, 156
SfcI CTRYAG 1 cut(s) 191
SgeI CNNG 4 cut(s) 37, 87, 158, 163
SinI GGWCC 2 cut(s) 86, 154
SseBI AGGCCT 1 cut(s) 79
SsiI CCGC 2 cut(s) 110, 157
StuI AGGCCT 1 cut(s) 79
StyI CCWWGG 1 cut(s) 74
TaaI ACNGT 2 cut(s) 19, 105
TscAI CASTG 1 cut(s) 110
TspRI CASTG 1 cut(s) 110
Tth111I GACNNNGTC 1 cut(s) 152
VpaK11BI GGWCC 2 cut(s) 86, 154
XmiI GTMKAC 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.