Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005533

Physical Location & Seq

Genomic Coordinates Forward (+)

36770544 .. 36774586

Gene Structure 4043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G427800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3096 bp

ATGGTTTCCCAATTCCATCTATTGCCTCAAACATTTGCCATTATATTCTCTCTTCTTCTATGCATATTTGTGAGCGTTGAGACAGCCAGACCAACGCCAAGCATTGCCACGGACAAGGAGGCTTTGATCTCATTCAAGTCAGGGGTCAGTCTCCCTCCATCTTTTTGGGACCAAAATTCATCTCCATGCACCAACTGGACTGGAGTTGTTTGCAACAAACTTGGCAACAGAGTTGTTGCTCTTCATCTTTCCGGCTTGGGACTTACAGGCTCCATTAGCCCCCATATTGGTAACCTCTCCTTCCTCCGTTCCCTTCAACTTCAAAATAACAAATTAACAGGAAACATTCCCTCTCAAATTCTCCACCTTTTCCGCTTGACATCTCTAAACTTGAGCTCCAACACCATACAAGGTCCCCTGCCATCAAACCTGACCCAATTGACTGCCCTCCAAACACTTGACCTAGCCTCAAATAACATCACAGGAACACTTCCTGAAAATCTCAACAGCTTGAAAAATCTTCAAGTCTTGAATTTGGCACGAAACAGACTCCATGGTCCAATCCCACCATCCATAAGCAACCTCTCTTCCACCCTCACACATTTGAACTTAGGCACAAATAGTCTCAGTGGTACGATACCCAGTGAATTGGGTTTCCTTTACAAACTCAAGGAACTTGATCTTGCAGGTAACCAACTCACTGGGACTGTTGCCCTGTCCATATACAACATCTCTTCTCTACTTCTCTTCACTGTAGCTTCAAACCAACTGTGGGGTGAGATTCCAAGCAATATTGGTCACACACTTCCAAATCTTCTATACTTCAGAAATTGTTTTAATCTATTCACCGGAAATATTCCAGTGTCTTTGCACAATATCTCCGGCATTCGATCAATTCGAATGTCCAACAACTTTCTTGAAGGAACGGTTCCACCAGGCCTAGGGAATTTGCCATTCATTGAAATGTACAACATTGGTTTCAATCGGATTGTTAGCTACGGTGGTGATGGTCTCAGTTTCATCACTTCCTTAACAAACAGCACCCGTCTCCAATTCCTTGCCATTGATGGTAATCATTTAGAGGGTGTAATTCCAGAGTCCATTGGAAACCTGTCCAAGGTTATCGAAAAATTGTACATGGGAGGGAACCGCATTTTCGGTCACATACCCTCCTCAATTGGTCAACTCAGTAGCTTGACTTTGCTGAATGTAAGCTATAATTTGATCTCTGGCGAAATCCCACCTGAAATAGGCCAGCTGGAAGAATTGCAAGTGCTTAGTTTAGCTGCAAACAAAATGTCTGGTCATATTACAAACTCCTTAGGTAATCTCAGAAAGCTGAACAACATTGATTTATCCAGAAATTCCTTTGTTGGCCATATACCCCCTTCCTTTGCAAACTTTCAGAAGTTGCTTTCCATGGACTTATCCAACAATTTGCTCAATGGAAGCATTTCTACAGAAATATTTCAAAACCTCCCTAGTTTGAGCACCATTCTGAATTTGTCTAACAACTTTCTGAGTGGTCCTTTGCCTGAAGAAATTGGGCTCCTAGGAAGTGTGGTCACTATAGACCTCTCAGACAACCGCTTGTCTGGATTGATCCCCAACACAATTGGAAAGTGTACAAGCTTGGAAGGATTGTTGATGGCGAGAAATAAACTCTCTGGTCCTCTTCCTAATGTTCTTGGAGATATGAGAGGTCTTGAGATTCTAGACCTCTCCTCAAACCAGCTTTCTGGGTCCATTCCTGACAAACTTGAAGACCTACAGGTCCTGAGCTACTTGAACCTCTCCTTTAATCACTTGGAAGGAGTAATTCCTAAAGGTGGAATCTTTGTTAAAAATAGCTCTAGTGTCCATCTTGAAGGCAACCCAAAGCTTTGCCTGCATTCGTCATGTGTGAATCCTGGCGGTCATAGGAGAAAAGTACTGATCCCAGTTCTTATTTCGACTGTTTTGGCAACATTGGCAGTATGTGTCATAGTTGGTTGTTTGCTCTATGTCAGCAAAAGCAAAGCAAGAGTTACAGAAACTAATTCTGATTTGTTAATAAAAGGGCAGCATCAAATGGTTACATATGAAGAGCTACGTGGCGCAACTGGGAATTTTAGCACGGAAAATTTGATTGGAAGCGGGAGCTTTGGGTCTGTATACAGAGGGTGCCTAAGAGATGGAATTGAAGTAGCAGTTGGAAAGTTGAGAAACCTAGCAAGGGTTTATAAGGAGTTGGGATCGTGGAAGAGTTTTTTGGCAGAGTGTGAGGCCTTGAGGAGCGTGAGGCATCGCAATCTTGTCAAACTGATCACATCATGCTCCATCTTGGACTTCAAGAACATGGATTTTTTGGCTTTGGTGTATGAGTATCTGAGTAATGGGAGCTTGGAAGATTGGATTCAGGGTAAGAGAAAGAATGCTAATGGAGATGGATTGAACATTGTGGAGAGACTGAATGTGGCCATTGATGTTGCTTGTGGATTGGATTATCTGCATCATGATTGTGAAGTTCCAGTGGCGCACTGTGATTTAAAGCCCAGCAACATTCTTTTGGACAGAGATATGATTGCAAAGATTGGAGATTTTGGGCTGGCCAAGTTGCTGATAGAAAGAACAAGCAATAACGTTCTCAGCTCCACAGATGTGCTAAAGGGTTCCATAGGATATATGCCACCAGGTCATTTGTTTGGTTTATTAAGAATGAACTATGATGCAGAGTATGGTTTTGGACAAAAGCCATCGACGGCCGGAGATGCATACAGTTTCGGAGTAGTGTTGTTGGAGCTGTTTACTGGGAAAAGCCCAACCCATGAAAGTTTCACAGGAGACGAAAACATTATCAGATGGGTGCACTCAGCCTTCCCTCAAAACATTGCCCAAGTACTAGACTCTGAGCTGCTACACCTCATGCAGCATCCGCCCAATGAATTAGAACGTAATTGCCTGACTTCAATTATAGAGGTTGGGCTATCTTGCACCTCTGCTTCGCCTGAGGGACGCATTAGCTTGAGGGATGCCCTCCACAAACTTGAAGCTGCTCGGCAGACCCTTTTCAAGCATACTCATGTTGAGACTGAGAGTGCCAAGCATGAATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002764 GO:0003674 GO:0003824 GO:0004672 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009595 GO:0009605 GO:0009607 GO:0009617 GO:0009626 GO:0009987 GO:0010204 GO:0010359 GO:0012501 GO:0012505 GO:0016020 GO:0016045 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022898 GO:0023052 GO:0031347 GO:0031349 GO:0032409 GO:0032412 GO:0032879 GO:0033554 GO:0034050 GO:0034762 GO:0034765 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051606 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080134 GO:0098543 GO:0098581 GO:0140096 GO:1901564 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1032

Amino Acids

112.11

Weight (kDa)

6.59

Isoelectric Point (pI)

40.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005533)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g36850 FvH4_3g36850 FvH4_3g36850
malus_domestica	MD08G1090900.v1.1 MD15G1074900.v1.1 MD15G1075000.v1.1
prunus_persica	Prupe.1G427400_v2.0.a1 Prupe.1G427700_v2.0.a1 Prupe.1G427800_v2.0.a1 Prupe.1G427800_v2.0.a1 Prupe.1G427800_v2.0.a1
pyrus_communis	pycom15g06980 pycom15g06990
rosa_chinensis	RchiOBHm_Chr5g0066001 RchiOBHm_Chr5g0066021
rosa_laevigata	RLG00000035833 RLG00000035834
rosa_multiflora	Rmu_sc0001473.1_g000006 Rmu_sc0011576.1_g000012 Rmu_sc0011576.1_g000015
rosa_roxburghii	Rroxscaffold_1G00014980 Rroxscaffold_1G00015120
rosa_rugosa	Rorug05G0375800 Rorug05G0375900 Rorug05G0376000
rosa_samantha	Rh5AG434300 Rh5AG434500 Rh5CG472900
rosa_wichuraiana	Rw5G040690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2223
AasI	GACNNNNNNGTC	2 cut(s)	555, 1772
Acc36I	ACCTGC	1 cut(s)	677
AccB1I	GGYRCC	1 cut(s)	2163
AccI	GTMKAC	1 cut(s)	2154
AciI	CCGC	6 cut(s)	373, 1150, 1588, 1914, 2136, 2915
AclI	AACGTT	1 cut(s)	2622
AclWI	GGATC	3 cut(s)	1597, 1930, 2242
AcoI	YGGCCR	4 cut(s)	1375, 2457, 2589, 2742
AcsI	RAATTY	9 cut(s)	175, 357, 532, 946, 1363, 1501, 2107, 2122, 3089
AcuI	CTGAAG	2 cut(s)	808, 1557
AfaI	GTAC	6 cut(s)	634, 968, 1136, 1627, 1932, 2880
AfiI	CCNNNNNNNGG	7 cut(s)	287, 772, 941, 1117, 1250, 1829, 2215
AjnI	CCWGG	3 cut(s)	934, 1909, 2671
AjuI	GAANNNNNNNTTGG	6 cut(s)	2112, 2144, 2175, 2207, 2234, 2266
AleI	CACNNNNGTG	1 cut(s)	2639
Alw21I	GWGCWC	3 cut(s)	398, 1493, 2850
Alw26I	GTCTC	8 cut(s)	74, 155, 629, 1016, 1052, 2440, 2817, 3062
Alw44I	GTGCAC	1 cut(s)	2846
AlwI	GGATC	3 cut(s)	1597, 1930, 2242
AlwNI	CAGNNNCTG	1 cut(s)	1777
AoxI	GGCC	7 cut(s)	937, 1252, 1375, 2265, 2457, 2589, 2742
ApaLI	GTGCAC	1 cut(s)	2846
ApeKI	GCWGC	5 cut(s)	1286, 2062, 2893, 2908, 3032
ApoI	RAATTY	9 cut(s)	175, 357, 532, 946, 1363, 1501, 2107, 2122, 3089
ArsI	GACNNNNNNTTYG	2 cut(s)	1283, 1315
Asp700I	GAANNNNTTC	2 cut(s)	1453, 1467
AspA2I	CCTAGG	2 cut(s)	940, 1552
AspLEI	GCGC	2 cut(s)	2099, 2518
AspS9I	GGNCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
AsuHPI	GGTGA	3 cut(s)	788, 838, 1016
AsuII	TTCGAA	1 cut(s)	898
AvaII	GGWCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
AvrII	CCTAGG	2 cut(s)	940, 1552
AxyI	CCTNAGG	2 cut(s)	1321, 2988
BaeGI	GKGCMC	1 cut(s)	2850
BalI	TGGCCA	3 cut(s)	1377, 2459, 2591
BanI	GGYRCC	1 cut(s)	2163
BanII	GRGCYC	2 cut(s)	398, 1551
BarI	GAAGNNNNNNTAC	2 cut(s)	1441, 1473
BbsI	GAAGAC	1 cut(s)	1770
Bbv12I	GWGCWC	3 cut(s)	398, 1493, 2850
BbvI	GCAGC	5 cut(s)	1273, 2074, 2880, 2920, 3019
BceAI	ACGGC	1 cut(s)	2757
BciT130I	CCWGG	3 cut(s)	936, 1911, 2673
BclI	TGATCA	1 cut(s)	2304
BcoDI	GTCTC	8 cut(s)	74, 155, 629, 1016, 1052, 2440, 2817, 3062
BfaI	CTAG	8 cut(s)	464, 941, 1482, 1553, 1715, 1854, 2210, 2882
BfmI	CTRYAG	4 cut(s)	753, 1458, 1569, 1769
BfuAI	ACCTGC	1 cut(s)	677
BisI	GCNGC	5 cut(s)	1287, 2063, 2894, 2909, 3033
BlnI	CCTAGG	2 cut(s)	940, 1552
BlsI	GCNGC	5 cut(s)	1288, 2064, 2895, 2910, 3034
BmcAI	AGTACT	2 cut(s)	1932, 2880
Bme1390I	CCNGG	3 cut(s)	936, 1911, 2673
Bme18I	GGWCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
BmgT120I	GGNCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
BmiI	GGNNCC	9 cut(s)	170, 271, 415, 930, 1148, 1550, 1744, 2165, 2653
BmrFI	CCNGG	3 cut(s)	936, 1911, 2673
BmrI	ACTGGG	5 cut(s)	636, 711, 1934, 2112, 2799
BmsI	GCATC	7 cut(s)	2074, 2293, 2500, 2698, 2740, 2920, 3001
BmuI	ACTGGG	5 cut(s)	636, 711, 1934, 2112, 2799
BpiI	GAAGAC	1 cut(s)	1770
BpmI	CTGGAG	1 cut(s)	222
Bpu10I	CCTNAGC	1 cut(s)	1778
Bpu14I	TTCGAA	1 cut(s)	898
BpuEI	CTTGAG	5 cut(s)	412, 653, 1727, 2290, 3025
BsaAI	YACGTR	1 cut(s)	2093
BsaBI	GATNNNNATC	1 cut(s)	1071
BsaI	GGTCTC	1 cut(s)	1016
BsaJI	CCNNGG	6 cut(s)	108, 553, 940, 1116, 1419, 1552
BsaWI	WCCGGW	1 cut(s)	848
BsaXI	ACNNNNNCTCC	6 cut(s)	380, 410, 863, 893, 1154, 1184
Bsc4I	CCNNNNNNNGG	7 cut(s)	287, 772, 941, 1117, 1250, 1829, 2215
Bse1I	ACTGG	9 cut(s)	200, 205, 642, 706, 860, 1940, 2107, 2510, 2794
Bse21I	CCTNAGG	2 cut(s)	1321, 2988
Bse3DI	GCAATG	2 cut(s)	102, 2868
Bse8I	GATNNNNATC	1 cut(s)	1071
BseBI	CCWGG	3 cut(s)	936, 1911, 2673
BseDI	CCNNGG	6 cut(s)	108, 553, 940, 1116, 1419, 1552
BseGI	GGATG	3 cut(s)	569, 2911, 3016
BseJI	GATNNNNATC	1 cut(s)	1071
BseLI	CCNNNNNNNGG	7 cut(s)	287, 772, 941, 1117, 1250, 1829, 2215
BseMI	GCAATG	2 cut(s)	102, 2868
BseNI	ACTGG	9 cut(s)	200, 205, 642, 706, 860, 1940, 2107, 2510, 2794
BseRI	GAGGAG	3 cut(s)	1162, 1714, 2287
BseSI	GKGCMC	1 cut(s)	2850
BseX3I	CGGCCG	1 cut(s)	2742
BseXI	GCAGC	5 cut(s)	1273, 2074, 2880, 2920, 3019
BseYI	CCCAGC	1 cut(s)	2534
Bsh1285I	CGRYCG	1 cut(s)	2745
BshFI	GGCC	7 cut(s)	939, 1254, 1377, 2267, 2459, 2591, 2744
BshNI	GGYRCC	1 cut(s)	2163
BsiEI	CGRYCG	1 cut(s)	2745
BsiHKAI	GWGCWC	3 cut(s)	398, 1493, 2850
BsiSI	CCGG	4 cut(s)	252, 849, 882, 2745
BslFI	GGGAC	5 cut(s)	182, 273, 399, 718, 3006
BslI	CCNNNNNNNGG	7 cut(s)	287, 772, 941, 1117, 1250, 1829, 2215
BsmAI	GTCTC	8 cut(s)	74, 155, 629, 1016, 1052, 2440, 2817, 3062
BsmBI	CGTCTC	2 cut(s)	1052, 2817
BsmFI	GGGAC	5 cut(s)	182, 273, 399, 718, 3006
BsmI	GAATGC	3 cut(s)	885, 1891, 2419
BsnI	GGCC	7 cut(s)	939, 1254, 1377, 2267, 2459, 2591, 2744
Bso31I	GGTCTC	1 cut(s)	1016
Bsp119I	TTCGAA	1 cut(s)	898
Bsp1286I	GDGCHC	4 cut(s)	398, 1493, 1551, 2850
Bsp1407I	TGTACA	3 cut(s)	966, 1134, 1625
Bsp143I	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
Bsp19I	CCATGG	2 cut(s)	553, 1419
BspACI	CCGC	6 cut(s)	373, 1150, 1588, 1914, 2136, 2915
BspANI	GGCC	7 cut(s)	939, 1254, 1377, 2267, 2459, 2591, 2744
BspHI	TCATGA	1 cut(s)	2494
BspLI	GGNNCC	9 cut(s)	170, 271, 415, 930, 1148, 1550, 1744, 2165, 2653
BspMI	ACCTGC	1 cut(s)	677
BspPI	GGATC	3 cut(s)	1597, 1930, 2242
BspQI	GCTCTTC	2 cut(s)	246, 2079
BspT104I	TTCGAA	1 cut(s)	898
BspT107I	GGYRCC	1 cut(s)	2163
BspTNI	GGTCTC	1 cut(s)	1016
BsrDI	GCAATG	2 cut(s)	102, 2868
BsrGI	TGTACA	3 cut(s)	966, 1134, 1625
BsrI	ACTGG	9 cut(s)	200, 205, 642, 706, 860, 1940, 2107, 2510, 2794
BssECI	CCNNGG	6 cut(s)	108, 553, 940, 1116, 1419, 1552
BssMI	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
BssNAI	GTATAC	1 cut(s)	2155
BssT1I	CCWWGG	5 cut(s)	553, 940, 1116, 1419, 1552
Bst1107I	GTATAC	1 cut(s)	2155
Bst2UI	CCWGG	3 cut(s)	936, 1911, 2673
Bst4CI	ACNGT	8 cut(s)	709, 754, 771, 928, 1001, 1957, 2522, 2759
Bst6I	CTCTTC	8 cut(s)	57, 246, 592, 739, 752, 1680, 2079, 2237
BstAUI	TGTACA	3 cut(s)	966, 1134, 1625
BstBAI	YACGTR	1 cut(s)	2093
BstBI	TTCGAA	1 cut(s)	898
BstC8I	GCNNGC	3 cut(s)	1256, 1889, 2589
BstDSI	CCRYGG	3 cut(s)	108, 553, 1419
BstEII	GGTNACC	2 cut(s)	290, 689
BstENI	CCTNNNNNAGG	2 cut(s)	1115, 1248
BstF5I	GGATG	3 cut(s)	569, 2911, 3016
BstHHI	GCGC	2 cut(s)	2099, 2518
BstKTI	GATC	8 cut(s)	129, 682, 893, 1227, 1605, 1938, 2237, 2307
BstMAI	GTCTC	8 cut(s)	74, 155, 629, 1016, 1052, 2440, 2817, 3062
BstMBI	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
BstMCI	CGRYCG	1 cut(s)	2745
BstMWI	GCNNNNNNNGC	5 cut(s)	276, 1888, 1970, 2750, 2914
BstNI	CCWGG	3 cut(s)	936, 1911, 2673
BstPI	GGTNACC	2 cut(s)	290, 689
BstSCI	CCNGG	3 cut(s)	934, 1909, 2671
BstSFI	CTRYAG	4 cut(s)	753, 1458, 1569, 1769
BstSLI	GKGCMC	1 cut(s)	2850
BstV1I	GCAGC	5 cut(s)	1273, 2074, 2880, 2920, 3019
BstV2I	GAAGAC	1 cut(s)	1770
BstXI	CCANNNNNNTGG	4 cut(s)	165, 649, 701, 1739
BstZ17I	GTATAC	1 cut(s)	2155
BstZI	CGGCCG	1 cut(s)	2742
Bsu36I	CCTNAGG	2 cut(s)	1321, 2988
BsuRI	GGCC	7 cut(s)	939, 1254, 1377, 2267, 2459, 2591, 2744
BtgI	CCRYGG	3 cut(s)	108, 553, 1419
BtgZI	GCGATG	1 cut(s)	2270
BtsCI	GGATG	3 cut(s)	569, 2911, 3016
BtsIMutI	CAGTG	7 cut(s)	634, 649, 699, 750, 867, 2517, 2518
BveI	ACCTGC	1 cut(s)	677
Cac8I	GCNNGC	3 cut(s)	1256, 1889, 2589
CaiI	CAGNNNCTG	1 cut(s)	1777
CciI	TCATGA	1 cut(s)	2494
CfoI	GCGC	2 cut(s)	2099, 2518
Cfr13I	GGNCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
CseI	GACGC	1 cut(s)	3003
CsiI	ACCWGGT	1 cut(s)	2671
Csp6I	GTAC	6 cut(s)	633, 967, 1135, 1626, 1931, 2879
CviQI	GTAC	6 cut(s)	633, 967, 1135, 1626, 1931, 2879
DpnI	GATC	8 cut(s)	128, 681, 892, 1226, 1604, 1937, 2236, 2306
DpnII	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
DraI	TTTAAA	1 cut(s)	2529
DrdI	GACNNNNNNGTC	2 cut(s)	555, 1772
DseDI	GACNNNNNNGTC	2 cut(s)	555, 1772
EaeI	YGGCCR	4 cut(s)	1375, 2457, 2589, 2742
EagI	CGGCCG	1 cut(s)	2742
Eam1104I	CTCTTC	8 cut(s)	57, 246, 592, 739, 752, 1680, 2079, 2237
EarI	CTCTTC	8 cut(s)	57, 246, 592, 739, 752, 1680, 2079, 2237
EciI	GGCGGA	1 cut(s)	2904
Ecl136II	GAGCTC	1 cut(s)	396
EclXI	CGGCCG	1 cut(s)	2742
Eco130I	CCWWGG	5 cut(s)	553, 940, 1116, 1419, 1552
Eco147I	AGGCCT	2 cut(s)	939, 2267
Eco24I	GRGCYC	2 cut(s)	398, 1551
Eco31I	GGTCTC	1 cut(s)	1016
Eco47I	GGWCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
Eco52I	CGGCCG	1 cut(s)	2742
Eco53kI	GAGCTC	1 cut(s)	396
Eco57I	CTGAAG	2 cut(s)	808, 1557
Eco81I	CCTNAGG	2 cut(s)	1321, 2988
Eco91I	GGTNACC	2 cut(s)	290, 689
EcoICRI	GAGCTC	1 cut(s)	396
EcoNI	CCTNNNNNAGG	2 cut(s)	1115, 1248
EcoO109I	RGGNCCY	2 cut(s)	413, 1774
EcoO65I	GGTNACC	2 cut(s)	290, 689
EcoRII	CCWGG	3 cut(s)	934, 1909, 2671
EcoT14I	CCWWGG	5 cut(s)	553, 940, 1116, 1419, 1552
EcoT22I	ATGCAT	2 cut(s)	65, 2755
EcoT38I	GRGCYC	2 cut(s)	398, 1551
ErhI	CCWWGG	5 cut(s)	553, 940, 1116, 1419, 1552
Esp3I	CGTCTC	2 cut(s)	1052, 2817
FaqI	GGGAC	5 cut(s)	182, 273, 399, 718, 3006
FauI	CCCGC	1 cut(s)	2129
FauNDI	CATATG	1 cut(s)	2080
FbaI	TGATCA	1 cut(s)	2304
FblI	GTMKAC	1 cut(s)	2154
Fnu4HI	GCNGC	5 cut(s)	1287, 2063, 2894, 2909, 3033
FokI	GGATG	3 cut(s)	556, 2898, 3023
FriOI	GRGCYC	2 cut(s)	398, 1551
Fsp4HI	GCNGC	5 cut(s)	1287, 2063, 2894, 2909, 3033
FspBI	CTAG	8 cut(s)	464, 941, 1482, 1553, 1715, 1854, 2210, 2882
GlaI	GCGC	2 cut(s)	2098, 2517
GluI	GCNGC	5 cut(s)	1287, 2063, 2894, 2909, 3033
GsaI	CCCAGC	1 cut(s)	2538
GsuI	CTGGAG	1 cut(s)	222
HaeIII	GGCC	7 cut(s)	939, 1254, 1377, 2267, 2459, 2591, 2744
HapII	CCGG	4 cut(s)	252, 849, 882, 2745
HgaI	GACGC	1 cut(s)	3003
HhaI	GCGC	2 cut(s)	2099, 2518
Hin6I	GCGC	2 cut(s)	2097, 2516
HinP1I	GCGC	2 cut(s)	2097, 2516
HincII	GTYRAC	1 cut(s)	1184
HindII	GTYRAC	1 cut(s)	1184
HindIII	AAGCTT	2 cut(s)	1630, 1880
HinfI	GANTC	8 cut(s)	549, 781, 1097, 1711, 1833, 1906, 2395, 2885
HpaII	CCGG	4 cut(s)	252, 849, 882, 2745
HphI	GGTGA	3 cut(s)	788, 838, 1016
Hpy166II	GTNNAC	5 cut(s)	1184, 1626, 2155, 2787, 2848
Hpy8I	GTNNAC	5 cut(s)	1184, 1626, 2155, 2787, 2848
Hpy99I	CGWCG	1 cut(s)	2743
HpyAV	CCTTC	8 cut(s)	310, 323, 914, 1398, 1631, 1805, 1862, 2866
HpyCH4III	ACNGT	8 cut(s)	709, 754, 771, 928, 1001, 1957, 2522, 2759
HpyCH4IV	ACGT	3 cut(s)	2092, 2622, 2932
HpyF10VI	GCNNNNNNNGC	5 cut(s)	276, 1888, 1970, 2750, 2914
HpySE526I	ACGT	3 cut(s)	2092, 2622, 2932
HspAI	GCGC	2 cut(s)	2097, 2516
Ksp22I	TGATCA	1 cut(s)	2304
Kzo9I	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
LguI	GCTCTTC	2 cut(s)	246, 2079
LmnI	GCTCC	9 cut(s)	275, 401, 1554, 2139, 2274, 2321, 2379, 2636, 2779
Lsp1109I	GCAGC	5 cut(s)	1273, 2074, 2880, 2920, 3019
LweI	GCATC	7 cut(s)	2074, 2293, 2500, 2698, 2740, 2920, 3001
MabI	ACCWGGT	1 cut(s)	2671
MaeI	CTAG	8 cut(s)	464, 941, 1482, 1553, 1715, 1854, 2210, 2882
MaeII	ACGT	3 cut(s)	2092, 2622, 2932
MaeIII	GTNAC	7 cut(s)	290, 689, 797, 1160, 1564, 2026, 2074
MalI	GATC	8 cut(s)	128, 681, 892, 1226, 1604, 1937, 2236, 2306
MboI	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
MfeI	CAATTG	3 cut(s)	437, 1176, 1614
MhlI	GDGCHC	4 cut(s)	398, 1493, 1551, 2850
MlsI	TGGCCA	3 cut(s)	1377, 2459, 2591
MluNI	TGGCCA	3 cut(s)	1377, 2459, 2591
MlyI	GAGTC	3 cut(s)	543, 1106, 2879
MmeI	TCCRAC	5 cut(s)	423, 930, 1455, 2173, 2757
Mox20I	TGGCCA	3 cut(s)	1377, 2459, 2591
Mph1103I	ATGCAT	2 cut(s)	65, 2755
MroXI	GAANNNNTTC	2 cut(s)	1453, 1467
MscI	TGGCCA	3 cut(s)	1377, 2459, 2591
MseI	TTAA	9 cut(s)	335, 837, 1031, 1800, 1842, 2051, 2528, 2693, 3094
MslI	CAYNNNNRTG	6 cut(s)	68, 184, 962, 2499, 2639, 3060
Msp20I	TGGCCA	3 cut(s)	1377, 2459, 2591
MspA1I	CMGCKG	1 cut(s)	1258
MspI	CCGG	4 cut(s)	252, 849, 882, 2745
MspR9I	CCNGG	3 cut(s)	936, 1911, 2673
MunI	CAATTG	3 cut(s)	437, 1176, 1614
Mva1269I	GAATGC	3 cut(s)	885, 1891, 2419
MvaI	CCWGG	3 cut(s)	936, 1911, 2673
MwoI	GCNNNNNNNGC	5 cut(s)	276, 1888, 1970, 2750, 2914
NcoI	CCATGG	2 cut(s)	553, 1419
NdeI	CATATG	1 cut(s)	2080
NdeII	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
NlaIV	GGNNCC	9 cut(s)	170, 271, 415, 930, 1148, 1550, 1744, 2165, 2653
NmeAIII	GCCGAG	1 cut(s)	3016
NmuCI	GTSAC	3 cut(s)	797, 1160, 1564
NsiI	ATGCAT	2 cut(s)	65, 2755
NspV	TTCGAA	1 cut(s)	898
OliI	CACNNNNGTG	1 cut(s)	2639
PagI	TCATGA	1 cut(s)	2494
PceI	AGGCCT	2 cut(s)	939, 2267
PciSI	GCTCTTC	2 cut(s)	246, 2079
PcsI	WCGNNNNNNNCGW	1 cut(s)	895
PctI	GAATGC	3 cut(s)	885, 1891, 2419
PdmI	GAANNNNTTC	2 cut(s)	1453, 1467
PfeI	GAWTC	5 cut(s)	781, 1711, 1833, 1906, 2395
PkrI	GCNGC	5 cut(s)	1288, 2064, 2895, 2910, 3034
PleI	GAGTC	3 cut(s)	543, 1105, 2879
PpsI	GAGTC	3 cut(s)	543, 1105, 2879
Ppu21I	YACGTR	1 cut(s)	2093
PpuMI	RGGWCCY	2 cut(s)	413, 1774
PsiI	TTATAA	1 cut(s)	2223
Psp124BI	GAGCTC	1 cut(s)	398
Psp1406I	AACGTT	1 cut(s)	2622
Psp5II	RGGWCCY	2 cut(s)	413, 1774
Psp6I	CCWGG	3 cut(s)	934, 1909, 2671
PspEI	GGTNACC	2 cut(s)	290, 689
PspFI	CCCAGC	1 cut(s)	2534
PspGI	CCWGG	3 cut(s)	934, 1909, 2671
PspN4I	GGNNCC	9 cut(s)	170, 271, 415, 930, 1148, 1550, 1744, 2165, 2653
PspPI	GGNCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
PspPPI	RGGWCCY	2 cut(s)	413, 1774
PstNI	CAGNNNCTG	1 cut(s)	1777
PvuII	CAGCTG	1 cut(s)	1258
RsaI	GTAC	6 cut(s)	634, 968, 1136, 1627, 1932, 2880
RsaNI	GTAC	6 cut(s)	633, 967, 1135, 1626, 1931, 2879
RseI	CAYNNNNRTG	6 cut(s)	68, 184, 962, 2499, 2639, 3060
SacI	GAGCTC	1 cut(s)	398
SapI	GCTCTTC	2 cut(s)	246, 2079
SaqAI	TTAA	9 cut(s)	335, 837, 1031, 1800, 1842, 2051, 2528, 2693, 3094
SatI	GCNGC	5 cut(s)	1287, 2063, 2894, 2909, 3033
Sau3AI	GATC	8 cut(s)	126, 679, 890, 1224, 1602, 1935, 2234, 2304
Sau96I	GGNCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
ScaI	AGTACT	2 cut(s)	1932, 2880
SchI	GAGTC	3 cut(s)	543, 1106, 2879
ScrFI	CCNGG	3 cut(s)	936, 1911, 2673
SduI	GDGCHC	4 cut(s)	398, 1493, 1551, 2850
SexAI	ACCWGGT	1 cut(s)	2671
SfaNI	GCATC	7 cut(s)	2074, 2293, 2500, 2698, 2740, 2920, 3001
SfcI	CTRYAG	4 cut(s)	753, 1458, 1569, 1769
SfuI	TTCGAA	1 cut(s)	898
SinI	GGWCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
SmiMI	CAYNNNNRTG	6 cut(s)	68, 184, 962, 2499, 2639, 3060
SmlI	CTYRAG	5 cut(s)	391, 668, 1706, 2269, 3004
SmoI	CTYRAG	5 cut(s)	391, 668, 1706, 2269, 3004
SseBI	AGGCCT	2 cut(s)	939, 2267
SsiI	CCGC	6 cut(s)	373, 1150, 1588, 1914, 2136, 2915
SspI	AATATT	3 cut(s)	793, 856, 1467
SspMI	CTAG	8 cut(s)	464, 941, 1482, 1553, 1715, 1854, 2210, 2882
SstI	GAGCTC	1 cut(s)	398
StuI	AGGCCT	2 cut(s)	939, 2267
StyD4I	CCNGG	3 cut(s)	934, 1909, 2671
StyI	CCWWGG	5 cut(s)	553, 940, 1116, 1419, 1552
TaaI	ACNGT	8 cut(s)	709, 754, 771, 928, 1001, 1957, 2522, 2759
TaiI	ACGT	3 cut(s)	2095, 2625, 2935
TaqI	TCGA	5 cut(s)	889, 898, 1125, 1952, 2738
TaqII	GACCGA	1 cut(s)	1148
TatI	WGTACW	5 cut(s)	966, 1134, 1625, 1930, 2878
TfiI	GAWTC	5 cut(s)	781, 1711, 1833, 1906, 2395
Tru1I	TTAA	9 cut(s)	335, 837, 1031, 1800, 1842, 2051, 2528, 2693, 3094
Tru9I	TTAA	9 cut(s)	335, 837, 1031, 1800, 1842, 2051, 2528, 2693, 3094
TscAI	CASTG	7 cut(s)	634, 649, 706, 757, 867, 2517, 2525
TseFI	GTSAC	3 cut(s)	797, 1160, 1564
TseI	GCWGC	5 cut(s)	1286, 2062, 2893, 2908, 3032
Tsp45I	GTSAC	3 cut(s)	797, 1160, 1564
TspDTI	ATGAA	8 cut(s)	168, 233, 946, 1009, 2097, 2714, 2823, 2937
TspGWI	ACGGA	3 cut(s)	125, 296, 2132
TspRI	CASTG	7 cut(s)	634, 649, 706, 757, 867, 2517, 2525
VneI	GTGCAC	1 cut(s)	2846
VpaK11BI	GGWCC	7 cut(s)	169, 413, 557, 1526, 1670, 1743, 1774
XagI	CCTNNNNNAGG	2 cut(s)	1115, 1248
XapI	RAATTY	9 cut(s)	175, 357, 532, 946, 1363, 1501, 2107, 2122, 3089
XbaI	TCTAGA	1 cut(s)	1714
XcmI	CCANNNNNNNNNTGG	1 cut(s)	192
XmaJI	CCTAGG	2 cut(s)	940, 1552
XmiI	GTMKAC	1 cut(s)	2154
XmnI	GAANNNNTTC	2 cut(s)	1453, 1467
XspI	CTAG	8 cut(s)	464, 941, 1482, 1553, 1715, 1854, 2210, 2882
ZrmI	AGTACT	2 cut(s)	1932, 2880
Zsp2I	ATGCAT	2 cut(s)	65, 2755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.