Rmu_sc0011576.1_g000015
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011576.1
Physical Location & Seq
Reverse (-)
41441 .. 43539
2099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011576.1_g000015.1.cds

Sequence Viewer

Length: 1950 bp
atgggagggaatcggatttatggtaacattcctgcctcagttggtcatcttagtagtttagctttgttaaatgtgagctacaattcaatatccggtgaaattcccactgaaataggccaattggaaaatctacaaatgcttggtttagcaggaaatcaactgtctggtcatattccaaactctttaggaaatctcaaaaaattgaacgatcttgatttatctgggaatcacattgttggccaaataccctcttctttttcaaacttccagaatctgctttccatggacttatcaaacaatcagctcaacggaaccatttccggtgaaactctcaaccttcccagcttgagcactattctcaatctgtccaaaaactttctaagtggacctttgccttcagaaattgggtcccttgaaagtgttgtcactatagacctatcttacaatgcattatctggagatatccctggatcaatagaaaagtgtaaaagcttggagagattgttgttgtcaagtaatagaatttcaggtcctattcccactggtctaggagaattgagaggccttgagtttctagacctctcctcaaaccagctgtccagctccattccagagaattttcaagacctacacgcccttcgatacttgaacctatcatttaataacttagaaggagtgattcctaacggtggactatttgttacaaatttcactaatgttcatcttgaaggcaacccaaaaatttgcctcaaatttccatgtgtgaagaatattgatggtcgtcgaagaagaaaaatactagtcccagttatgatcagtacaacagtcttcgcaagcatatgcgttatagtgggctgtttggtctatgctaagaaaagaaaaggctgcagagcaaaaattacagaaacttgtgatgacttagaagtcaaagggcagcatcaaatggtatcgtatgaagaactccgtcgctcaacagggaatttcaaccctgataatttggttggaagggggagctttggttctgtttataaagggtttcttagagaccaaggaattgaagttgcagtcaaggtgctcgatataagaaccacagggtcttggaagagtttcttggcagagtgtaatgcattgaggagtgtgaggcaccgaaatcttgtcaaactgatcacctcctgctcaagcttagactctaagaacatggagtttctggctttggtttatgagtatctgagtaatgggagcttggaagattggattaagggcaagagaacaaattcagatggagacggtttgagcattgtggagagattgaatgcggcaattgacgttgcttgtggattggattacctccataatgattgtgaagttgcagtggctcactgtgatttgaagccaagcaacattcttttggacaaagacatgactgcaaaggttggagattttgggctggcaaggttactgatacaagaaacatccactcaacattctattggctccaccaatgtcctcaagggttccataggatatatacccccagaatatggttttggacataaaccctccacagctggagatgcatacagttttggagtaatgttgttggagctgtttactggaaaaagtccaaccgatgaaagcttcacaggagaagttaacctcgttcaatgggtgcagtcatcttttccccataacattgcacaagtactagactctgagttgttacactatgagcacgacaaagactcaaatcgcatctcagaagaagatctgaattgtctgatctcagttatcgaggttgggctctcttgcaccttcgcctctcctgatggacggattagcttgagggatgcccttcacaaacttgaaactgctagagagacccttttgaagcttgctcaccttgacagtgctgagtgtaaatttcgacaacaaatgcaggttgaggtataa

Protein Analysis

649

Amino Acids

70.84

Weight (kDa)

5.71

Isoelectric Point (pI)

35.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1029
AasI GACNNNNNNGTC 1 cut(s) 923
Acc36I ACCTGC 1 cut(s) 1927
AccB1I GGYRCC 1 cut(s) 1143
AccB7I CCANNNNNTGG 1 cut(s) 1541
AciI CCGC 1 cut(s) 1316
AclWI GGATC 1 cut(s) 478
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 9 cut(s) 99, 522, 616, 706, 741, 752, 979, 1273, 1919
AcuI CTGAAG 1 cut(s) 381
AfaI GTAC 2 cut(s) 820, 1704
AfiI CCNNNNNNNGG 2 cut(s) 689, 1541
AhlI ACTAGT 1 cut(s) 799
AjnI CCWGG 1 cut(s) 466
AjuI GAANNNNNNNTTGG 4 cut(s) 1094, 1126, 1530, 1562
AloI GAACNNNNNNTCC 2 cut(s) 1003, 1035
Alw21I GWGCWC 3 cut(s) 353, 1077, 1734
Alw26I GTCTC 3 cut(s) 1038, 1278, 1871
AlwI GGATC 1 cut(s) 478
AlwNI CAGNNNCTG 1 cut(s) 274
AoxI GGCC 3 cut(s) 115, 238, 562
ApeKI GCWGC 2 cut(s) 885, 934
ApoI RAATTY 9 cut(s) 99, 522, 616, 706, 741, 752, 979, 1273, 1919
ArsI GACNNNNNNTTYG 2 cut(s) 581, 613
Asp700I GAANNNNTTC 3 cut(s) 316, 1106, 1273
AspS9I GGNCC 3 cut(s) 386, 408, 530
AsuHPI GGTGA 4 cut(s) 107, 335, 1159, 1889
AvaII GGWCC 3 cut(s) 386, 408, 530
BalI TGGCCA 1 cut(s) 240
BanI GGYRCC 1 cut(s) 1143
BanII GRGCYC 1 cut(s) 1803
BbsI GAAGAC 1 cut(s) 820
Bbv12I GWGCWC 3 cut(s) 353, 1077, 1734
BbvI GCAGC 2 cut(s) 872, 946
BccI CCATC 3 cut(s) 770, 1274, 1820
BciT130I CCWGG 1 cut(s) 468
BclI TGATCA 2 cut(s) 813, 1164
BcoDI GTCTC 3 cut(s) 1038, 1278, 1871
BcuI ACTAGT 1 cut(s) 799
BfaI CTAG 5 cut(s) 548, 575, 800, 1706, 1872
BfmI CTRYAG 2 cut(s) 429, 886
BfuAI ACCTGC 1 cut(s) 1927
BglII AGATCT 1 cut(s) 1765
BisI GCNGC 3 cut(s) 886, 935, 1317
BlsI GCNGC 3 cut(s) 887, 936, 1318
BmcAI AGTACT 1 cut(s) 1704
Bme1390I CCNGG 1 cut(s) 468
Bme18I GGWCC 3 cut(s) 386, 408, 530
BmgT120I GGNCC 3 cut(s) 386, 408, 530
BmiI GGNNCC 6 cut(s) 313, 409, 410, 1145, 1495, 1516
BmrFI CCNGG 1 cut(s) 468
BmrI ACTGGG 1 cut(s) 800
BmsI GCATC 4 cut(s) 946, 1564, 1761, 1837
BmuI ACTGGG 1 cut(s) 800
BpiI GAAGAC 1 cut(s) 820
BpmI CTGGAG 2 cut(s) 477, 1590
BpuEI CTTGAG 5 cut(s) 367, 587, 1162, 1493, 1861
BsaI GGTCTC 2 cut(s) 1038, 1871
BsaJI CCNNGG 3 cut(s) 282, 466, 1048
BsaWI WCCGGW 2 cut(s) 92, 320
BsaXI ACNNNNNCTCC 4 cut(s) 488, 518, 1003, 1033
Bsc4I CCNNNNNNNGG 2 cut(s) 689, 1541
Bse1I ACTGG 3 cut(s) 547, 806, 1618
Bse3DI GCAATG 1 cut(s) 1692
BseBI CCWGG 1 cut(s) 468
BseDI CCNNGG 3 cut(s) 282, 466, 1048
BseGI GGATG 2 cut(s) 1472, 1852
BseLI CCNNNNNNNGG 2 cut(s) 689, 1541
BseMI GCAATG 1 cut(s) 1692
BseMII CTCAG 6 cut(s) 51, 1220, 1704, 1770, 1797, 1902
BseNI ACTGG 3 cut(s) 547, 806, 1618
BseRI GAGGAG 2 cut(s) 574, 1147
BseXI GCAGC 2 cut(s) 872, 946
BseYI CCCAGC 1 cut(s) 341
BsgI GTGCAG 1 cut(s) 1691
BshFI GGCC 3 cut(s) 117, 240, 564
BshNI GGYRCC 1 cut(s) 1143
BsiHKAI GWGCWC 3 cut(s) 353, 1077, 1734
BsiSI CCGG 2 cut(s) 93, 321
BslFI GGGAC 2 cut(s) 394, 788
BslI CCNNNNNNNGG 2 cut(s) 689, 1541
BsmAI GTCTC 3 cut(s) 1038, 1278, 1871
BsmBI CGTCTC 1 cut(s) 1278
BsmFI GGGAC 2 cut(s) 394, 788
BsmI GAATGC 1 cut(s) 1318
BsnI GGCC 3 cut(s) 117, 240, 564
Bso31I GGTCTC 2 cut(s) 1038, 1871
Bsp1286I GDGCHC 4 cut(s) 353, 1077, 1734, 1803
Bsp143I GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
Bsp19I CCATGG 1 cut(s) 282
BspACI CCGC 1 cut(s) 1316
BspANI GGCC 3 cut(s) 117, 240, 564
BspCNI CTCAG 6 cut(s) 50, 1221, 1705, 1769, 1796, 1903
BspLI GGNNCC 6 cut(s) 313, 409, 410, 1145, 1495, 1516
BspMAI CTGCAG 1 cut(s) 890
BspMI ACCTGC 1 cut(s) 1927
BspPI GGATC 1 cut(s) 478
BspT107I GGYRCC 1 cut(s) 1143
BspTNI GGTCTC 2 cut(s) 1038, 1871
BsrDI GCAATG 1 cut(s) 1692
BsrI ACTGG 3 cut(s) 547, 806, 1618
BssECI CCNNGG 3 cut(s) 282, 466, 1048
BssMI GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
BssT1I CCWWGG 2 cut(s) 282, 1048
Bst2UI CCWGG 1 cut(s) 468
Bst4CI ACNGT 7 cut(s) 162, 689, 826, 1289, 1382, 1583, 1907
Bst6I CTCTTC 2 cut(s) 256, 1097
BstC8I GCNNGC 3 cut(s) 835, 1449, 1893
BstDSI CCRYGG 1 cut(s) 282
BstF5I GGATG 2 cut(s) 1472, 1852
BstKTI GATC 6 cut(s) 211, 473, 816, 1167, 1768, 1782
BstMAI GTCTC 3 cut(s) 1038, 1278, 1871
BstMBI GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
BstMWI GCNNNNNNNGC 1 cut(s) 1574
BstNI CCWGG 1 cut(s) 468
BstSCI CCNGG 1 cut(s) 466
BstSFI CTRYAG 2 cut(s) 429, 886
BstV1I GCAGC 2 cut(s) 872, 946
BstV2I GAAGAC 1 cut(s) 820
BstX2I RGATCY 1 cut(s) 1765
BstYI RGATCY 1 cut(s) 1765
BsuRI GGCC 3 cut(s) 117, 240, 564
BtgI CCRYGG 1 cut(s) 282
BtsCI GGATG 2 cut(s) 1472, 1852
BtsI GCAGTG 1 cut(s) 1377
BtsIMutI CAGTG 5 cut(s) 105, 540, 1377, 1378, 1912
BveI ACCTGC 1 cut(s) 1927
Cac8I GCNNGC 3 cut(s) 835, 1449, 1893
CaiI CAGNNNCTG 1 cut(s) 274
Cfr13I GGNCC 3 cut(s) 386, 408, 530
Csp6I GTAC 2 cut(s) 819, 1703
CviAII CATG 4 cut(s) 283, 759, 1198, 1420
CviQI GTAC 2 cut(s) 819, 1703
DpnI GATC 6 cut(s) 210, 472, 815, 1166, 1767, 1781
DpnII GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
DrdI GACNNNNNNGTC 1 cut(s) 923
DseDI GACNNNNNNGTC 1 cut(s) 923
EaeI YGGCCR 1 cut(s) 238
Eam1104I CTCTTC 2 cut(s) 256, 1097
EarI CTCTTC 2 cut(s) 256, 1097
Eco130I CCWWGG 2 cut(s) 282, 1048
Eco147I AGGCCT 1 cut(s) 564
Eco24I GRGCYC 1 cut(s) 1803
Eco31I GGTCTC 2 cut(s) 1038, 1871
Eco32I GATATC 1 cut(s) 463
Eco47I GGWCC 3 cut(s) 386, 408, 530
Eco57I CTGAAG 1 cut(s) 381
EcoO109I RGGNCCY 2 cut(s) 408, 530
EcoRII CCWGG 1 cut(s) 466
EcoRV GATATC 1 cut(s) 463
EcoT14I CCWWGG 2 cut(s) 282, 1048
EcoT22I ATGCAT 3 cut(s) 451, 1129, 1579
EcoT38I GRGCYC 1 cut(s) 1803
ErhI CCWWGG 2 cut(s) 282, 1048
Esp3I CGTCTC 1 cut(s) 1278
FaeI CATG 4 cut(s) 286, 762, 1201, 1423
FalI AAGNNNNNCTT 6 cut(s) 373, 405, 1023, 1055, 1094, 1126
FaqI GGGAC 2 cut(s) 394, 788
FatI CATG 4 cut(s) 282, 758, 1197, 1419
FauNDI CATATG 1 cut(s) 839
FbaI TGATCA 2 cut(s) 813, 1164
Fnu4HI GCNGC 3 cut(s) 886, 935, 1317
FokI GGATG 2 cut(s) 1459, 1859
FriOI GRGCYC 1 cut(s) 1803
Fsp4HI GCNGC 3 cut(s) 886, 935, 1317
FspBI CTAG 5 cut(s) 548, 575, 800, 1706, 1872
GluI GCNGC 3 cut(s) 886, 935, 1317
GsaI CCCAGC 1 cut(s) 345
GsuI CTGGAG 2 cut(s) 477, 1590
HaeIII GGCC 3 cut(s) 117, 240, 564
HapII CCGG 2 cut(s) 93, 321
Hin1II CATG 4 cut(s) 286, 762, 1201, 1423
HincII GTYRAC 1 cut(s) 1654
HindII GTYRAC 1 cut(s) 1654
HindIII AAGCTT 4 cut(s) 490, 1180, 1636, 1889
HinfI GANTC 7 cut(s) 10, 226, 271, 679, 1187, 1709, 1742
HpaI GTTAAC 1 cut(s) 1654
HpaII CCGG 2 cut(s) 93, 321
HphI GGTGA 4 cut(s) 107, 335, 1159, 1889
Hpy166II GTNNAC 4 cut(s) 386, 692, 1611, 1654
Hpy188I TCNGA 8 cut(s) 15, 400, 1230, 1279, 1714, 1759, 1770, 1779
Hpy188III TCNNGA 8 cut(s) 212, 268, 456, 575, 611, 623, 725, 1823
Hpy8I GTNNAC 4 cut(s) 386, 692, 1611, 1654
Hpy99I CGWCG 2 cut(s) 786, 969
HpyAV CCTTC 8 cut(s) 347, 405, 647, 665, 722, 999, 1822, 1862
HpyCH4III ACNGT 7 cut(s) 162, 689, 826, 1289, 1382, 1583, 1907
HpyCH4IV ACGT 1 cut(s) 1326
HpyF10VI GCNNNNNNNGC 1 cut(s) 1574
HpySE526I ACGT 1 cut(s) 1326
Hsp92II CATG 4 cut(s) 286, 762, 1201, 1423
KflI GGGWCCC 1 cut(s) 408
Ksp22I TGATCA 2 cut(s) 813, 1164
KspAI GTTAAC 1 cut(s) 1654
Kzo9I GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
LmnI GCTCC 5 cut(s) 608, 1011, 1239, 1499, 1603
Lsp1109I GCAGC 2 cut(s) 872, 946
LweI GCATC 4 cut(s) 946, 1564, 1761, 1837
MaeI CTAG 5 cut(s) 548, 575, 800, 1706, 1872
MaeII ACGT 1 cut(s) 1326
MaeIII GTNAC 5 cut(s) 23, 424, 700, 1455, 1719
MalI GATC 6 cut(s) 210, 472, 815, 1166, 1767, 1781
MboI GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
MfeI CAATTG 2 cut(s) 119, 1320
MflI RGATCY 1 cut(s) 1765
MhlI GDGCHC 4 cut(s) 353, 1077, 1734, 1803
MlsI TGGCCA 1 cut(s) 240
MluNI TGGCCA 1 cut(s) 240
MlyI GAGTC 3 cut(s) 1181, 1703, 1736
MmeI TCCRAC 4 cut(s) 982, 1414, 1581, 1649
Mox20I TGGCCA 1 cut(s) 240
Mph1103I ATGCAT 3 cut(s) 451, 1129, 1579
MroXI GAANNNNTTC 3 cut(s) 316, 1106, 1273
MscI TGGCCA 1 cut(s) 240
MseI TTAA 4 cut(s) 68, 660, 1257, 1653
Msp20I TGGCCA 1 cut(s) 240
MspA1I CMGCKG 2 cut(s) 595, 1568
MspI CCGG 2 cut(s) 93, 321
MspR9I CCNGG 1 cut(s) 468
MunI CAATTG 2 cut(s) 119, 1320
Mva1269I GAATGC 1 cut(s) 1318
MvaI CCWGG 1 cut(s) 468
MwoI GCNNNNNNNGC 1 cut(s) 1574
NcoI CCATGG 1 cut(s) 282
NdeI CATATG 1 cut(s) 839
NdeII GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
NlaIII CATG 4 cut(s) 286, 762, 1201, 1423
NlaIV GGNNCC 6 cut(s) 313, 409, 410, 1145, 1495, 1516
NmuCI GTSAC 1 cut(s) 424
NsiI ATGCAT 3 cut(s) 451, 1129, 1579
PceI AGGCCT 1 cut(s) 564
PctI GAATGC 1 cut(s) 1318
PdmI GAANNNNTTC 3 cut(s) 316, 1106, 1273
PfeI GAWTC 4 cut(s) 10, 226, 271, 679
PflMI CCANNNNNTGG 1 cut(s) 1541
PkrI GCNGC 3 cut(s) 887, 936, 1318
PleI GAGTC 3 cut(s) 1181, 1703, 1736
PpsI GAGTC 3 cut(s) 1181, 1703, 1736
PpuMI RGGWCCY 2 cut(s) 408, 530
PsiI TTATAA 1 cut(s) 1029
Psp5II RGGWCCY 2 cut(s) 408, 530
Psp6I CCWGG 1 cut(s) 466
PspFI CCCAGC 1 cut(s) 341
PspGI CCWGG 1 cut(s) 466
PspN4I GGNNCC 6 cut(s) 313, 409, 410, 1145, 1495, 1516
PspPI GGNCC 3 cut(s) 386, 408, 530
PspPPI RGGWCCY 2 cut(s) 408, 530
PstI CTGCAG 1 cut(s) 890
PstNI CAGNNNCTG 1 cut(s) 274
PsuI RGATCY 1 cut(s) 1765
PvuII CAGCTG 2 cut(s) 595, 1568
RsaI GTAC 2 cut(s) 820, 1704
RsaNI GTAC 2 cut(s) 819, 1703
SaqAI TTAA 4 cut(s) 68, 660, 1257, 1653
SatI GCNGC 3 cut(s) 886, 935, 1317
Sau3AI GATC 6 cut(s) 208, 470, 813, 1164, 1765, 1779
Sau96I GGNCC 3 cut(s) 386, 408, 530
ScaI AGTACT 1 cut(s) 1704
SchI GAGTC 3 cut(s) 1181, 1703, 1736
ScrFI CCNGG 1 cut(s) 468
SduI GDGCHC 4 cut(s) 353, 1077, 1734, 1803
SfaNI GCATC 4 cut(s) 946, 1564, 1761, 1837
SfcI CTRYAG 2 cut(s) 429, 886
SinI GGWCC 3 cut(s) 386, 408, 530
SmlI CTYRAG 5 cut(s) 346, 566, 1177, 1508, 1840
SmoI CTYRAG 5 cut(s) 346, 566, 1177, 1508, 1840
SpeI ACTAGT 1 cut(s) 799
SseBI AGGCCT 1 cut(s) 564
SsiI CCGC 1 cut(s) 1316
SspI AATATT 1 cut(s) 772
SspMI CTAG 5 cut(s) 548, 575, 800, 1706, 1872
StuI AGGCCT 1 cut(s) 564
StyD4I CCNGG 1 cut(s) 466
StyI CCWWGG 2 cut(s) 282, 1048
TaaI ACNGT 7 cut(s) 162, 689, 826, 1289, 1382, 1583, 1907
TaiI ACGT 1 cut(s) 1329
TaqI TCGA 5 cut(s) 640, 784, 1077, 1791, 1924
TatI WGTACW 2 cut(s) 818, 1702
TauI GCSGC 1 cut(s) 1319
TfiI GAWTC 4 cut(s) 10, 226, 271, 679
Tru1I TTAA 4 cut(s) 68, 660, 1257, 1653
Tru9I TTAA 4 cut(s) 68, 660, 1257, 1653
TscAI CASTG 5 cut(s) 112, 547, 1377, 1385, 1912
TseFI GTSAC 1 cut(s) 424
TseI GCWGC 2 cut(s) 885, 934
Tsp45I GTSAC 1 cut(s) 424
TspDTI ATGAA 3 cut(s) 710, 969, 1647
TspGWI ACGGA 3 cut(s) 324, 953, 1846
TspRI CASTG 5 cut(s) 112, 547, 1377, 1385, 1912
Van91I CCANNNNNTGG 1 cut(s) 1541
VpaK11BI GGWCC 3 cut(s) 386, 408, 530
XapI RAATTY 9 cut(s) 99, 522, 616, 706, 741, 752, 979, 1273, 1919
XbaI TCTAGA 1 cut(s) 574
XmnI GAANNNNTTC 3 cut(s) 316, 1106, 1273
XspI CTAG 5 cut(s) 548, 575, 800, 1706, 1872
ZrmI AGTACT 1 cut(s) 1704
Zsp2I ATGCAT 3 cut(s) 451, 1129, 1579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.