Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005533

Physical Location & Seq

Genomic Coordinates Forward (+)

72112061 .. 72114839

Gene Structure 2779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34182

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGAGCCACTTGACTGCAATAGAAATGCTCGACTTGGCGGGGAATAACATAACAGGGAGGCTACCTGAAGAGATATCTAGCCAAAGAAAACTTCGGGTCTTGAATCTGGGACGAAACAATTTCTTTGGTTCAATTCCTTCATCCATAAGCAACCTCTCATCCACGCTCACATATTTGAATTTGGGTACAAATAACCTCAGTGGGATCATACCTAGTGAGTTGGGTCTACTTATCAATCTCAAGGAACTTGATCTTTCTGGTAACAAGTTCACTGGGACTGTTGCTCCCTCAATGTACAACATTACTTCATTGGTTCTGTTTACTGTTGCTTCAAATCAACTTTGGGGTGAGATTCCCAAAAATATTGATGAAACACTTCCAAACCTTTTATACTACCGGAACTGCTTTAATCTTATGACAGGGAAAATTCCAGCGTCTTTGCACAATATCACCAAGATTCGATCAATTCGAATGTCAAACAATTTTCTGGAAGGAACAGTTCCACCAGGTCTGGGAAACATGCCATTTCTTGAAATGTACAACATTGGCTTCAATCGGATCGTCAGTAAAGGCAGTGATGGTCTCAGTTTTATCACTTCCTTGACGAACAGCACCAACCTGCAATTTCTTGCTATCGACGACAATCAGTTAGAGGGAGTCATTCCAGAATCACTTGGCAATCTCTCAAAGGTTCTCTTAAAATTGTACATGGGAGGGAATCGGATTTATGGTAACATTCCTGCCTCAGTTGGTCATCTTAGTGGTTTAACTTTGTTAAATGTGAGCTACAATTCAATATCTGGTGAAATTCCCACTGAAATAGGCCAATTGGAAAACCTACAAATGCTTGGTTTAGCAGGAAATGAAATGTCTGGTCATATTCCAAACTCTTTAGGAAATCTCAAAAAGTTGAACGGTATTGATTTATCTGGGAATCACTTTGTCGGCCAAATACCCTCTTCTTTTTCAAACTTCCAGAGTTTGCTTTCCATGGACTTGTCAAACAATCAGCTCAACGGAACCATTTCCGGTGAAACTCTCAACCTTCCTAGTTTGAGCACCATTCTCAATCTGTCCAAAAACTTTCTGAGTGGACCTTTGCCTACAGAAATTGGGTCCCTTGAAAGTGTTGTCTCTATAGACCTCTCTGACAATGCATTATCTGGAGATATCCCTGGATCAATAGGAAAGTGTAAAAGCTTGGAGAGATTGTTGATGTCAAGAAATAGAATTTCAGGTCCTATTCCCACTGGTCTAGGAGAATTGAGAGGCCTTGAGTTTCTAGACCTCTCCTCAAACCAGCTGTCCAGCTCCATTCCAGAGAATTTTCGAGACCTACATGCCCTTCGATACTTGAACCTATCATTTAATAACTTAGAAGGAGTGATTCCTAATGGTGGAGTATTTGTTACAGATTTCACTAATGTTCATCTTGAAGGCAACCCAAAAATTTGCCTCAAATTTCCATGTGAGAAGAATACTGATGGTCATCGAAGAAGAAAAATACTAGTCCTAGTTATCATCATTACAACAGTCTTAGCAACCATATGTGTTATAGTGGGCTCTTTGGTCTATGCTAAGACAAGAAAAGACTGCAAAGCAAAAATTACAGGACCTTGTGATAACGTAGTAGTAAAAGGGCAGCATCAGATGGTATCTTATGAAGAACTCCGTCGTTCAACAGGGAATTTCAACCCGGATAATTTAGTGCTCGATATAAGAACAACAGGGTCTTGGAAGAGTTTCTTGGCAGAGTGTAATGCATTAAGGAACGTGAGGCACCGAAATCTTGTCAAACTGATCACCTCCTGCTCAAGCTTAGACTGTAAGAACATGGAGTTTCTGGCTTTGGTTTATGAGTATCTGAGTAATGGGAGCTTGGAAGATTGGATTAAGGGCAAGAGAACAAATTCAGATGGAGACGGTTTGAACATTGTGGAGAGATTGAATGTGGCAATTGATGTTGCTTGTGGATTGGATTACCTCCATAATGATTGTGAAGTTCCAGTGGCTCACTGTGATTTGAAACCAAGCAACATTCTTTTGGACAGAGACATGACTGCAAAGGTTGGAGATTTTGGGCTAGCAAAGTTACTGATACAGGAAGCATCCACTCAACATTCTATTGGCTCCACCAATGTCCTCAAGGGTTCCATAGGATATATACCCCCAGAATATGGTTTTGGACAAAAACCCACCACAGCTGGAGATGCATACAGTTTTGGAGTAATGTTGTTGGAGCTGTTTACTGGAAAAAGTCCAACCGATGAAAGCTTCATAGGAGAAGTTAACCTCGTTCAGTGGGTGCAGTCATCTTTTCCCCACAACATTGCAGAAGTACTAGACTCTGAGTTGTTACATTATGAGCACGACGAAGGCTCAAATCCCATCTCAGAAGAAGAACTGAATTGTTTGATATCAGTTATCGAGGTTGGGCTCTCTTGCACCTTCACCTCTTCTGATGGAAGGATTAGCTTGAGGGATGCCCTTCACAAACTTGAAACTGCTAGAAAGACCCTTTTTAAGCTTGCTCAGTTTGAGAGTGCAGACTGCAGAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002764 GO:0003674 GO:0003824 GO:0004672 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009595 GO:0009605 GO:0009607 GO:0009617 GO:0009626 GO:0009987 GO:0010204 GO:0010359 GO:0012501 GO:0012505 GO:0016020 GO:0016045 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022898 GO:0023052 GO:0031347 GO:0031349 GO:0032409 GO:0032412 GO:0032879 GO:0033554 GO:0034050 GO:0034762 GO:0034765 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051606 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080134 GO:0098543 GO:0098581 GO:0140096 GO:1901564 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

853

Amino Acids

93.06

Weight (kDa)

5.61

Isoelectric Point (pI)

34.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	29 - 90	1.9e-06	Leucine rich repeat
LRR_14	PF23598	236 - 307	1.8e-06	Leucine-rich repeat region
LRR_14	PF23598	320 - 458	1.3e-10	Leucine-rich repeat region
LRR_8	PF13855	422 - 459	2.8e-07	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	578 - 757	2.1e-29	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	579 - 757	6.2e-31	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005533)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g36850 FvH4_3g36850 FvH4_3g36850
malus_domestica	MD08G1090900.v1.1 MD15G1074900.v1.1 MD15G1075000.v1.1
prunus_persica	Prupe.1G427400_v2.0.a1 Prupe.1G427700_v2.0.a1 Prupe.1G427800_v2.0.a1 Prupe.1G427800_v2.0.a1 Prupe.1G427800_v2.0.a1
pyrus_communis	pycom15g06980 pycom15g06990
rosa_chinensis	RchiOBHm_Chr5g0066001 RchiOBHm_Chr5g0066021
rosa_laevigata	RLG00000035833 RLG00000035834
rosa_multiflora	Rmu_sc0001473.1_g000006 Rmu_sc0011576.1_g000012 Rmu_sc0011576.1_g000015
rosa_roxburghii	Rroxscaffold_1G00014980 Rroxscaffold_1G00015120
rosa_rugosa	Rorug05G0375800 Rorug05G0375900 Rorug05G0376000
rosa_samantha	Rh5AG434300 Rh5AG434500 Rh5CG472900
rosa_wichuraiana	Rw5G040690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	627
AccB1I	GGYRCC	1 cut(s)	1779
AccB7I	CCANNNNNTGG	1 cut(s)	2177
AccI	GTMKAC	1 cut(s)	226
AciI	CCGC	1 cut(s)	38
AclWI	GGATC	3 cut(s)	212, 566, 1186
AcoI	YGGCCR	1 cut(s)	946
AcsI	RAATTY	9 cut(s)	178, 426, 807, 1230, 1324, 1449, 1460, 1687, 1909
AcuI	CTGAAG	1 cut(s)	87
AfaI	GTAC	5 cut(s)	187, 296, 539, 707, 2340
AfiI	CCNNNNNNNGG	3 cut(s)	512, 1397, 2177
AhlI	ACTAGT	1 cut(s)	1507
AjnI	CCWGG	2 cut(s)	505, 1174
AjuI	GAANNNNNNNTTGG	6 cut(s)	75, 107, 1730, 1762, 2166, 2198
Alw21I	GWGCWC	3 cut(s)	1061, 1713, 2370
Alw26I	GTCTC	5 cut(s)	587, 1138, 1326, 1914, 2046
AlwI	GGATC	3 cut(s)	212, 566, 1186
AoxI	GGCC	3 cut(s)	823, 946, 1270
ApeKI	GCWGC	1 cut(s)	1642
ApoI	RAATTY	9 cut(s)	178, 426, 807, 1230, 1324, 1449, 1460, 1687, 1909
ArsI	GACNNNNNNTTYG	2 cut(s)	1289, 1321
Asp700I	GAANNNNTTC	4 cut(s)	375, 1024, 1742, 1909
AspS9I	GGNCC	4 cut(s)	1094, 1116, 1238, 1613
AsuC2I	CCSGG	1 cut(s)	1697
AsuHPI	GGTGA	6 cut(s)	359, 442, 815, 1043, 1795, 2443
AsuII	TTCGAA	1 cut(s)	469
AsuNHI	GCTAGC	1 cut(s)	2083
AvaII	GGWCC	4 cut(s)	1094, 1116, 1238, 1613
BanI	GGYRCC	1 cut(s)	1779
BanII	GRGCYC	2 cut(s)	1565, 2439
Bbv12I	GWGCWC	3 cut(s)	1061, 1713, 2370
BbvI	GCAGC	1 cut(s)	1654
BccI	CCATC	6 cut(s)	572, 1478, 1645, 1910, 2396, 2456
BciT130I	CCWGG	2 cut(s)	507, 1176
BclI	TGATCA	1 cut(s)	1800
BcnI	CCSGG	1 cut(s)	1697
BcoDI	GTCTC	5 cut(s)	587, 1138, 1326, 1914, 2046
BcuI	ACTAGT	1 cut(s)	1507
BfmI	CTRYAG	3 cut(s)	1104, 1137, 2551
BfuAI	ACCTGC	1 cut(s)	627
BisI	GCNGC	1 cut(s)	1643
BlsI	GCNGC	1 cut(s)	1644
BmcAI	AGTACT	1 cut(s)	2340
Bme1390I	CCNGG	3 cut(s)	507, 1176, 1697
Bme18I	GGWCC	4 cut(s)	1094, 1116, 1238, 1613
BmgT120I	GGNCC	4 cut(s)	1094, 1116, 1238, 1613
BmiI	GGNNCC	6 cut(s)	1021, 1117, 1118, 1781, 2131, 2152
BmrFI	CCNGG	3 cut(s)	507, 1176, 1697
BmrI	ACTGGG	1 cut(s)	282
BmsI	GCATC	4 cut(s)	1654, 2117, 2200, 2473
BmtI	GCTAGC	1 cut(s)	2087
BmuI	ACTGGG	1 cut(s)	282
BpmI	CTGGAG	2 cut(s)	1185, 2226
Bpu14I	TTCGAA	1 cut(s)	469
BpuEI	CTTGAG	5 cut(s)	224, 1295, 1798, 2129, 2497
BpuMI	CCSGG	1 cut(s)	1697
BsaBI	GATNNNNATC	1 cut(s)	1488
BsaI	GGTCTC	2 cut(s)	587, 1326
BsaJI	CCNNGG	2 cut(s)	990, 1174
BsaWI	WCCGGW	2 cut(s)	396, 1028
BsaXI	ACNNNNNCTCC	6 cut(s)	268, 298, 1196, 1226, 1392, 1422
Bsc4I	CCNNNNNNNGG	3 cut(s)	512, 1397, 2177
Bse1I	ACTGG	4 cut(s)	277, 1255, 2006, 2254
Bse3DI	GCAATG	1 cut(s)	2328
Bse8I	GATNNNNATC	1 cut(s)	1488
BseBI	CCWGG	2 cut(s)	507, 1176
BseDI	CCNNGG	2 cut(s)	990, 1174
BseGI	GGATG	4 cut(s)	140, 158, 2108, 2488
BseJI	GATNNNNATC	1 cut(s)	1488
BseLI	CCNNNNNNNGG	3 cut(s)	512, 1397, 2177
BseMI	GCAATG	1 cut(s)	2328
BseMII	CTCAG	8 cut(s)	211, 598, 759, 1079, 1856, 2340, 2406, 2546
BseNI	ACTGG	4 cut(s)	277, 1255, 2006, 2254
BseRI	GAGGAG	1 cut(s)	1282
BseXI	GCAGC	1 cut(s)	1654
BsgI	GTGCAG	1 cut(s)	2327
BshFI	GGCC	3 cut(s)	825, 948, 1272
BshNI	GGYRCC	1 cut(s)	1779
BsiHKAI	GWGCWC	3 cut(s)	1061, 1713, 2370
BsiSI	CCGG	3 cut(s)	397, 1029, 1697
BslFI	GGGAC	3 cut(s)	123, 289, 1102
BslI	CCNNNNNNNGG	3 cut(s)	512, 1397, 2177
BsmAI	GTCTC	5 cut(s)	587, 1138, 1326, 1914, 2046
BsmBI	CGTCTC	1 cut(s)	1914
BsmFI	GGGAC	3 cut(s)	123, 289, 1102
BsnI	GGCC	3 cut(s)	825, 948, 1272
Bso31I	GGTCTC	2 cut(s)	587, 1326
Bsp119I	TTCGAA	1 cut(s)	469
Bsp1286I	GDGCHC	5 cut(s)	1061, 1565, 1713, 2370, 2439
Bsp1407I	TGTACA	3 cut(s)	294, 537, 705
Bsp143I	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
Bsp19I	CCATGG	1 cut(s)	990
BspACI	CCGC	1 cut(s)	38
BspANI	GGCC	3 cut(s)	825, 948, 1272
BspCNI	CTCAG	8 cut(s)	210, 597, 758, 1080, 1857, 2341, 2405, 2545
BspLI	GGNNCC	6 cut(s)	1021, 1117, 1118, 1781, 2131, 2152
BspMAI	CTGCAG	1 cut(s)	2555
BspMI	ACCTGC	1 cut(s)	627
BspOI	GCTAGC	1 cut(s)	2087
BspPI	GGATC	3 cut(s)	212, 566, 1186
BspT104I	TTCGAA	1 cut(s)	469
BspT107I	GGYRCC	1 cut(s)	1779
BspTNI	GGTCTC	2 cut(s)	587, 1326
BsrDI	GCAATG	1 cut(s)	2328
BsrGI	TGTACA	3 cut(s)	294, 537, 705
BsrI	ACTGG	4 cut(s)	277, 1255, 2006, 2254
BssECI	CCNNGG	2 cut(s)	990, 1174
BssMI	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
BssT1I	CCWWGG	1 cut(s)	990
Bst2UI	CCWGG	2 cut(s)	507, 1176
Bst4CI	ACNGT	9 cut(s)	280, 325, 499, 917, 1534, 1826, 1925, 2018, 2219
Bst6I	CTCTTC	4 cut(s)	63, 964, 1733, 2461
BstAUI	TGTACA	3 cut(s)	294, 537, 705
BstBI	TTCGAA	1 cut(s)	469
BstC8I	GCNNGC	2 cut(s)	2085, 2529
BstDSI	CCRYGG	1 cut(s)	990
BstF5I	GGATG	4 cut(s)	140, 158, 2108, 2488
BstKTI	GATC	6 cut(s)	207, 253, 464, 561, 1181, 1803
BstMAI	GTCTC	5 cut(s)	587, 1138, 1326, 1914, 2046
BstMBI	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
BstMWI	GCNNNNNNNGC	1 cut(s)	2210
BstNI	CCWGG	2 cut(s)	507, 1176
BstNSI	RCATGY	2 cut(s)	523, 1343
BstSCI	CCNGG	3 cut(s)	505, 1174, 1695
BstSFI	CTRYAG	3 cut(s)	1104, 1137, 2551
BstV1I	GCAGC	1 cut(s)	1654
BsuRI	GGCC	3 cut(s)	825, 948, 1272
BtgI	CCRYGG	1 cut(s)	990
BtsCI	GGATG	4 cut(s)	140, 158, 2108, 2488
BtsI	GCAGTG	1 cut(s)	580
BtsIMutI	CAGTG	8 cut(s)	205, 270, 580, 813, 1248, 2013, 2014, 2306
BveI	ACCTGC	1 cut(s)	627
Cac8I	GCNNGC	2 cut(s)	2085, 2529
Cfr13I	GGNCC	4 cut(s)	1094, 1116, 1238, 1613
CseI	GACGC	1 cut(s)	423
CsiI	ACCWGGT	1 cut(s)	505
Csp6I	GTAC	5 cut(s)	186, 295, 538, 706, 2339
CviAII	CATG	7 cut(s)	520, 709, 991, 1340, 1467, 1834, 2056
CviQI	GTAC	5 cut(s)	186, 295, 538, 706, 2339
DpnI	GATC	6 cut(s)	206, 252, 463, 560, 1180, 1802
DpnII	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
EaeI	YGGCCR	1 cut(s)	946
Eam1104I	CTCTTC	4 cut(s)	63, 964, 1733, 2461
EarI	CTCTTC	4 cut(s)	63, 964, 1733, 2461
Eco130I	CCWWGG	1 cut(s)	990
Eco147I	AGGCCT	1 cut(s)	1272
Eco24I	GRGCYC	2 cut(s)	1565, 2439
Eco31I	GGTCTC	2 cut(s)	587, 1326
Eco32I	GATATC	3 cut(s)	75, 1171, 2418
Eco47I	GGWCC	4 cut(s)	1094, 1116, 1238, 1613
Eco57I	CTGAAG	1 cut(s)	87
EcoO109I	RGGNCCY	3 cut(s)	1116, 1238, 1613
EcoRII	CCWGG	2 cut(s)	505, 1174
EcoRV	GATATC	3 cut(s)	75, 1171, 2418
EcoT14I	CCWWGG	1 cut(s)	990
EcoT22I	ATGCAT	3 cut(s)	1159, 1765, 2215
EcoT38I	GRGCYC	2 cut(s)	1565, 2439
ErhI	CCWWGG	1 cut(s)	990
Esp3I	CGTCTC	1 cut(s)	1914
FaeI	CATG	7 cut(s)	523, 712, 994, 1343, 1470, 1837, 2059
FalI	AAGNNNNNCTT	4 cut(s)	680, 712, 1730, 1762
FaqI	GGGAC	3 cut(s)	123, 289, 1102
FatI	CATG	7 cut(s)	519, 708, 990, 1339, 1466, 1833, 2055
FauI	CCCGC	1 cut(s)	31
FauNDI	CATATG	1 cut(s)	1547
FbaI	TGATCA	1 cut(s)	1800
FblI	GTMKAC	1 cut(s)	226
Fnu4HI	GCNGC	1 cut(s)	1643
FokI	GGATG	4 cut(s)	127, 145, 2095, 2495
FriOI	GRGCYC	2 cut(s)	1565, 2439
Fsp4HI	GCNGC	1 cut(s)	1643
GluI	GCNGC	1 cut(s)	1643
GsuI	CTGGAG	2 cut(s)	1185, 2226
HaeIII	GGCC	3 cut(s)	825, 948, 1272
HapII	CCGG	3 cut(s)	397, 1029, 1697
HgaI	GACGC	1 cut(s)	423
Hin1II	CATG	7 cut(s)	523, 712, 994, 1343, 1470, 1837, 2059
HincII	GTYRAC	1 cut(s)	2290
HindII	GTYRAC	1 cut(s)	2290
HindIII	AAGCTT	4 cut(s)	1198, 1816, 2272, 2525
HinfI	GANTC	9 cut(s)	103, 352, 457, 657, 668, 718, 934, 1387, 2345
HpaI	GTTAAC	1 cut(s)	2290
HpaII	CCGG	3 cut(s)	397, 1029, 1697
HphI	GGTGA	6 cut(s)	359, 442, 815, 1043, 1795, 2443
Hpy166II	GTNNAC	6 cut(s)	227, 270, 321, 1094, 2247, 2290
Hpy8I	GTNNAC	6 cut(s)	227, 270, 321, 1094, 2247, 2290
Hpy99I	CGWCG	3 cut(s)	641, 1677, 2375
HpyCH4III	ACNGT	9 cut(s)	280, 325, 499, 917, 1534, 1826, 1925, 2018, 2219
HpyCH4IV	ACGT	2 cut(s)	1626, 1773
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2210
HpySE526I	ACGT	2 cut(s)	1626, 1773
Hsp92II	CATG	7 cut(s)	523, 712, 994, 1343, 1470, 1837, 2059
KflI	GGGWCCC	1 cut(s)	1116
Ksp22I	TGATCA	1 cut(s)	1800
KspAI	GTTAAC	1 cut(s)	2290
Kzo9I	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
LmnI	GCTCC	5 cut(s)	289, 1316, 1875, 2135, 2239
Lsp1109I	GCAGC	1 cut(s)	1654
LweI	GCATC	4 cut(s)	1654, 2117, 2200, 2473
MabI	ACCWGGT	1 cut(s)	505
MaeII	ACGT	2 cut(s)	1626, 1773
MaeIII	GTNAC	5 cut(s)	260, 731, 1408, 2091, 2355
MalI	GATC	6 cut(s)	206, 252, 463, 560, 1180, 1802
MboI	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
MfeI	CAATTG	2 cut(s)	827, 1956
MhlI	GDGCHC	5 cut(s)	1061, 1565, 1713, 2370, 2439
MlyI	GAGTC	2 cut(s)	666, 2339
MmeI	TCCRAC	3 cut(s)	2050, 2217, 2285
Mph1103I	ATGCAT	3 cut(s)	1159, 1765, 2215
MroXI	GAANNNNTTC	4 cut(s)	375, 1024, 1742, 1909
MseI	TTAA	9 cut(s)	408, 698, 767, 776, 1368, 1766, 1893, 2289, 2523
MslI	CAYNNNNRTG	1 cut(s)	759
MspA1I	CMGCKG	2 cut(s)	1303, 2204
MspI	CCGG	3 cut(s)	397, 1029, 1697
MspR9I	CCNGG	3 cut(s)	507, 1176, 1697
MunI	CAATTG	2 cut(s)	827, 1956
MvaI	CCWGG	2 cut(s)	507, 1176
MwoI	GCNNNNNNNGC	1 cut(s)	2210
NciI	CCSGG	1 cut(s)	1697
NcoI	CCATGG	1 cut(s)	990
NdeI	CATATG	1 cut(s)	1547
NdeII	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
NheI	GCTAGC	1 cut(s)	2083
NlaIII	CATG	7 cut(s)	523, 712, 994, 1343, 1470, 1837, 2059
NlaIV	GGNNCC	6 cut(s)	1021, 1117, 1118, 1781, 2131, 2152
NsiI	ATGCAT	3 cut(s)	1159, 1765, 2215
NspI	RCATGY	2 cut(s)	523, 1343
NspV	TTCGAA	1 cut(s)	469
PceI	AGGCCT	1 cut(s)	1272
PcsI	WCGNNNNNNNCGW	1 cut(s)	466
PdmI	GAANNNNTTC	4 cut(s)	375, 1024, 1742, 1909
PfeI	GAWTC	7 cut(s)	103, 352, 457, 668, 718, 934, 1387
PflMI	CCANNNNNTGG	1 cut(s)	2177
PkrI	GCNGC	1 cut(s)	1644
PleI	GAGTC	2 cut(s)	665, 2339
PpsI	GAGTC	2 cut(s)	665, 2339
PpuMI	RGGWCCY	3 cut(s)	1116, 1238, 1613
Psp5II	RGGWCCY	3 cut(s)	1116, 1238, 1613
Psp6I	CCWGG	2 cut(s)	505, 1174
PspGI	CCWGG	2 cut(s)	505, 1174
PspN4I	GGNNCC	6 cut(s)	1021, 1117, 1118, 1781, 2131, 2152
PspPI	GGNCC	4 cut(s)	1094, 1116, 1238, 1613
PspPPI	RGGWCCY	3 cut(s)	1116, 1238, 1613
PstI	CTGCAG	1 cut(s)	2555
PvuII	CAGCTG	2 cut(s)	1303, 2204
RsaI	GTAC	5 cut(s)	187, 296, 539, 707, 2340
RsaNI	GTAC	5 cut(s)	186, 295, 538, 706, 2339
RseI	CAYNNNNRTG	1 cut(s)	759
SaqAI	TTAA	9 cut(s)	408, 698, 767, 776, 1368, 1766, 1893, 2289, 2523
SatI	GCNGC	1 cut(s)	1643
Sau3AI	GATC	6 cut(s)	204, 250, 461, 558, 1178, 1800
Sau96I	GGNCC	4 cut(s)	1094, 1116, 1238, 1613
ScaI	AGTACT	1 cut(s)	2340
SchI	GAGTC	2 cut(s)	666, 2339
ScrFI	CCNGG	3 cut(s)	507, 1176, 1697
SduI	GDGCHC	5 cut(s)	1061, 1565, 1713, 2370, 2439
SexAI	ACCWGGT	1 cut(s)	505
SfaNI	GCATC	4 cut(s)	1654, 2117, 2200, 2473
SfcI	CTRYAG	3 cut(s)	1104, 1137, 2551
SfuI	TTCGAA	1 cut(s)	469
SinI	GGWCC	4 cut(s)	1094, 1116, 1238, 1613
SmiMI	CAYNNNNRTG	1 cut(s)	759
SmlI	CTYRAG	5 cut(s)	239, 1274, 1813, 2144, 2476
SmoI	CTYRAG	5 cut(s)	239, 1274, 1813, 2144, 2476
SpeI	ACTAGT	1 cut(s)	1507
SseBI	AGGCCT	1 cut(s)	1272
SsiI	CCGC	1 cut(s)	38
SspI	AATATT	1 cut(s)	364
StuI	AGGCCT	1 cut(s)	1272
StyD4I	CCNGG	3 cut(s)	505, 1174, 1695
StyI	CCWWGG	1 cut(s)	990
TaaI	ACNGT	9 cut(s)	280, 325, 499, 917, 1534, 1826, 1925, 2018, 2219
TaiI	ACGT	2 cut(s)	1629, 1776
TaqI	TCGA	9 cut(s)	30, 460, 469, 636, 1330, 1348, 1492, 1713, 2427
TatI	WGTACW	4 cut(s)	294, 537, 705, 2338
TfiI	GAWTC	7 cut(s)	103, 352, 457, 668, 718, 934, 1387
Tru1I	TTAA	9 cut(s)	408, 698, 767, 776, 1368, 1766, 1893, 2289, 2523
Tru9I	TTAA	9 cut(s)	408, 698, 767, 776, 1368, 1766, 1893, 2289, 2523
TscAI	CASTG	8 cut(s)	205, 277, 580, 820, 1255, 2013, 2021, 2306
TseI	GCWGC	1 cut(s)	1642
TspDTI	ATGAA	8 cut(s)	129, 297, 384, 879, 1418, 1677, 2266, 2283
TspGWI	ACGGA	2 cut(s)	1032, 1661
TspRI	CASTG	8 cut(s)	205, 277, 580, 820, 1255, 2013, 2021, 2306
Van91I	CCANNNNNTGG	1 cut(s)	2177
VpaK11BI	GGWCC	4 cut(s)	1094, 1116, 1238, 1613
XapI	RAATTY	9 cut(s)	178, 426, 807, 1230, 1324, 1449, 1460, 1687, 1909
XbaI	TCTAGA	1 cut(s)	1282
XceI	RCATGY	2 cut(s)	523, 1343
XmiI	GTMKAC	1 cut(s)	226
XmnI	GAANNNNTTC	4 cut(s)	375, 1024, 1742, 1909
ZrmI	AGTACT	1 cut(s)	2340
Zsp2I	ATGCAT	3 cut(s)	1159, 1765, 2215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.