Prupe.1G453200_v2.0.a1

GTP-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0009883
Physical Location & Seq
Forward (+)
38092823 .. 38095557
2735 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G453200.1

Sequence Viewer

Length: 1002 bp
ATGGTTCTTCTTCACCTCCCAAGAACTCACATATCTCTCTGCACCCATTTCTCTCTCTTCTCAAAACCCAAAACCCCCACCTTCAACATCGCCACCACTCTCCACCCAATCCTCACCTGCAAACTCTTCTCCGCACCCAAATCGACCCTCTCAGCCTCAGAGTCCATCCCCATTTCCCAATTCCCCGGAAACCACATCGAAACTCCTCAAGAATTCGAGACCCCCATCGAAATCCATCCAGAATTCGAAACTCACATCGAAATCCCGCTCGAGAAGCTCTTCGTGCCTCCTGAAACCGAGGTCAAGTACACCGACAGCGGTGCTCTGAGCACGAGAATCTTGAAAGGGTCCAATATTCTGCTCAGCAAGTACGCCAGAGACGCTCAGGTGAACCAAGCCGAGTTTGTGAAGAGCAGTGTGAGGACTGAGGATTGCCCCTCTGACGGTCTCCCTGAGTTTGCTCTTGTGGGTCGCTCCAATGTCGGCAAGTCCTCTCTGCTCAACTCGCTTGTGCGCCGAAAGAAGCTCGCTTTAACCTCCAAGAAACCTGGGAAAACACAATGTATCAATCATTTTCGGATCAATGATAGCTGGTACCTGGTGGATTTGCCAGGCTACGGGTATGCAGCTGCACCGCAAGAACTTAGAACTGATTGGGTGAAATTTACTAAAGACTACTTCCTGAATAGATCAACATTGGTTTCGGTTTTCCTTCTCATTGATGCTAGCATTCCTGCCAAGAAAATTGATCTGGAATATGCTAGTTGGCTGGGTCAGAATCAGATTCCTATGACTTTGATATTCACTAAATGTGACAAGCGGAAGAAGAAAAGGCATGGAGGAAAAAAAGCAGAAGAAAATGTGCAGGATTTCCAGGAGTTAATAAGTGGCTTCTTTGAGACAGTGCCGCCATGGATTATGACCAGCAGCTTAACCAATCAGGGTCGTGACGAGATGCTATTGCATATGGCTCAGCTGCGGAATTACTGGCTCAAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1

Protein Analysis

334

Amino Acids

37.82

Weight (kDa)

9.03

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 125
Acc36I ACCTGC 1 cut(s) 125
Acc65I GGTACC 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 594
AccBSI CCGCTC 1 cut(s) 268
AciI CCGC 7 cut(s) 132, 266, 318, 635, 820, 908, 979
AclWI GGATC 1 cut(s) 587
AcsI RAATTY 3 cut(s) 212, 242, 662
AfaI GTAC 3 cut(s) 308, 371, 596
AfiI CCNNNNNNNGG 2 cut(s) 443, 617
AgsI TTSAA 2 cut(s) 85, 343
AjnI CCWGG 4 cut(s) 547, 597, 610, 873
AluBI AGCT 6 cut(s) 277, 526, 591, 629, 930, 976
AluI AGCT 6 cut(s) 277, 526, 591, 629, 930, 976
Alw21I GWGCWC 2 cut(s) 325, 332
Alw26I GTCTC 4 cut(s) 212, 372, 452, 893
AlwI GGATC 1 cut(s) 587
Ama87I CYCGRG 1 cut(s) 269
ApeKI GCWGC 4 cut(s) 626, 629, 927, 976
ApoI RAATTY 3 cut(s) 212, 242, 662
Asp700I GAANNNNTTC 1 cut(s) 278
Asp718I GGTACC 1 cut(s) 594
AspLEI GCGC 1 cut(s) 516
AspS9I GGNCC 1 cut(s) 348
AsuC2I CCSGG 1 cut(s) 186
AsuHPI GGTGA 4 cut(s) 5, 106, 400, 670
AsuII TTCGAA 1 cut(s) 246
AsuNHI GCTAGC 1 cut(s) 725
AvaI CYCGRG 1 cut(s) 269
AvaII GGWCC 1 cut(s) 348
BanI GGYRCC 1 cut(s) 594
BauI CACGAG 1 cut(s) 331
Bbv12I GWGCWC 2 cut(s) 325, 332
BbvI GCAGC 4 cut(s) 616, 638, 939, 963
BccI CCATC 3 cut(s) 173, 233, 243
BcgI CGANNNNNNTGC 4 cut(s) 123, 157, 302, 336
BciT130I CCWGG 4 cut(s) 549, 599, 612, 875
BcnI CCSGG 1 cut(s) 186
BcoDI GTCTC 4 cut(s) 212, 372, 452, 893
BfaI CTAG 3 cut(s) 726, 762, 1000
BfuAI ACCTGC 1 cut(s) 125
BisI GCNGC 5 cut(s) 627, 630, 908, 928, 977
BlpI GCTNAGC 2 cut(s) 362, 972
BlsI GCNGC 5 cut(s) 628, 631, 909, 929, 978
Bme1390I CCNGG 5 cut(s) 186, 549, 599, 612, 875
Bme18I GGWCC 1 cut(s) 348
BmeT110I CYCGRG 1 cut(s) 269
BmgT120I GGNCC 1 cut(s) 348
BmiI GGNNCC 2 cut(s) 349, 596
BmrFI CCNGG 5 cut(s) 186, 549, 599, 612, 875
BmsI GCATC 2 cut(s) 712, 945
BmtI GCTAGC 1 cut(s) 729
Bpu10I CCTNAGC 1 cut(s) 384
Bpu1102I GCTNAGC 2 cut(s) 362, 972
Bpu14I TTCGAA 1 cut(s) 246
BpuEI CTTGAG 2 cut(s) 192, 977
BpuMI CCSGG 1 cut(s) 186
BsaI GGTCTC 2 cut(s) 212, 452
BsaJI CCNNGG 4 cut(s) 184, 297, 548, 911
Bsc4I CCNNNNNNNGG 2 cut(s) 443, 617
Bse1I ACTGG 1 cut(s) 992
BseBI CCWGG 4 cut(s) 549, 599, 612, 875
BseDI CCNNGG 4 cut(s) 184, 297, 548, 911
BseGI GGATG 2 cut(s) 165, 235
BseLI CCNNNNNNNGG 2 cut(s) 443, 617
BseMII CTCAG 8 cut(s) 165, 171, 317, 376, 398, 417, 444, 986
BseNI ACTGG 1 cut(s) 992
BseRI GAGGAG 1 cut(s) 195
BseXI GCAGC 4 cut(s) 616, 638, 939, 963
BseYI CCCAGC 1 cut(s) 769
BsgI GTGCAG 3 cut(s) 25, 615, 884
BshNI GGYRCC 1 cut(s) 594
BsiHKAI GWGCWC 2 cut(s) 325, 332
BsiHKCI CYCGRG 1 cut(s) 269
BsiSI CCGG 1 cut(s) 186
BslI CCNNNNNNNGG 2 cut(s) 443, 617
BsmAI GTCTC 4 cut(s) 212, 372, 452, 893
BsmBI CGTCTC 1 cut(s) 372
BsmI GAATGC 1 cut(s) 729
Bso31I GGTCTC 2 cut(s) 212, 452
BsoBI CYCGRG 1 cut(s) 269
Bsp119I TTCGAA 1 cut(s) 246
Bsp1286I GDGCHC 2 cut(s) 325, 332
Bsp143I GATC 3 cut(s) 579, 689, 748
Bsp1720I GCTNAGC 2 cut(s) 362, 972
Bsp19I CCATGG 1 cut(s) 911
BspACI CCGC 7 cut(s) 132, 266, 318, 635, 820, 908, 979
BspCNI CTCAG 8 cut(s) 164, 170, 318, 375, 397, 418, 445, 985
BspLI GGNNCC 2 cut(s) 349, 596
BspMI ACCTGC 1 cut(s) 125
BspOI GCTAGC 1 cut(s) 729
BspPI GGATC 1 cut(s) 587
BspQI GCTCTTC 2 cut(s) 284, 404
BspT104I TTCGAA 1 cut(s) 246
BspT107I GGYRCC 1 cut(s) 594
BspTNI GGTCTC 2 cut(s) 212, 452
BsrBI CCGCTC 1 cut(s) 268
BsrI ACTGG 1 cut(s) 992
BssECI CCNNGG 4 cut(s) 184, 297, 548, 911
BssMI GATC 3 cut(s) 579, 689, 748
BssSI CACGAG 1 cut(s) 331
BssT1I CCWWGG 1 cut(s) 911
Bst2BI CACGAG 1 cut(s) 331
Bst2UI CCWGG 4 cut(s) 549, 599, 612, 875
Bst4CI ACNGT 2 cut(s) 446, 904
Bst6I CTCTTC 4 cut(s) 62, 131, 284, 404
BstBI TTCGAA 1 cut(s) 246
BstC8I GCNNGC 2 cut(s) 528, 727
BstDEI CTNAG 9 cut(s) 151, 157, 326, 362, 384, 426, 453, 644, 972
BstDSI CCRYGG 1 cut(s) 911
BstF5I GGATG 2 cut(s) 165, 235
BstHHI GCGC 1 cut(s) 516
BstKTI GATC 3 cut(s) 582, 692, 751
BstMAI GTCTC 4 cut(s) 212, 372, 452, 893
BstMBI GATC 3 cut(s) 579, 689, 748
BstMWI GCNNNNNNNGC 4 cut(s) 274, 283, 380, 505
BstNI CCWGG 4 cut(s) 549, 599, 612, 875
BstSCI CCNGG 5 cut(s) 184, 547, 597, 610, 873
BstV1I GCAGC 4 cut(s) 616, 638, 939, 963
BtgI CCRYGG 1 cut(s) 911
BtgZI GCGATG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 165, 235
BtsI GCAGTG 1 cut(s) 421
BtsIMutI CAGTG 2 cut(s) 421, 909
BveI ACCTGC 1 cut(s) 125
Cac8I GCNNGC 2 cut(s) 528, 727
CfoI GCGC 1 cut(s) 516
Cfr13I GGNCC 1 cut(s) 348
CseI GACGC 1 cut(s) 389
CsiI ACCWGGT 1 cut(s) 597
Csp6I GTAC 3 cut(s) 307, 370, 595
CviAII CATG 2 cut(s) 836, 912
CviQI GTAC 3 cut(s) 307, 370, 595
DdeI CTNAG 9 cut(s) 151, 157, 326, 362, 384, 426, 453, 644, 972
DpnI GATC 3 cut(s) 581, 691, 750
DpnII GATC 3 cut(s) 579, 689, 748
Eam1104I CTCTTC 4 cut(s) 62, 131, 284, 404
EarI CTCTTC 4 cut(s) 62, 131, 284, 404
Eco130I CCWWGG 1 cut(s) 911
Eco31I GGTCTC 2 cut(s) 212, 452
Eco47I GGWCC 1 cut(s) 348
Eco88I CYCGRG 1 cut(s) 269
EcoRI GAATTC 2 cut(s) 212, 242
EcoRII CCWGG 4 cut(s) 547, 597, 610, 873
EcoT14I CCWWGG 1 cut(s) 911
ErhI CCWWGG 1 cut(s) 911
Esp3I CGTCTC 1 cut(s) 372
FaeI CATG 2 cut(s) 839, 915
FaiI YATR 9 cut(s) 32, 624, 759, 791, 837, 913, 920, 966, 968
FatI CATG 2 cut(s) 835, 911
FauI CCCGC 1 cut(s) 273
FauNDI CATATG 1 cut(s) 966
Fnu4HI GCNGC 5 cut(s) 627, 630, 908, 928, 977
FokI GGATG 2 cut(s) 152, 222
Fsp4HI GCNGC 5 cut(s) 627, 630, 908, 928, 977
FspBI CTAG 3 cut(s) 726, 762, 1000
GlaI GCGC 1 cut(s) 515
GluI GCNGC 5 cut(s) 627, 630, 908, 928, 977
GsaI CCCAGC 1 cut(s) 773
HapII CCGG 1 cut(s) 186
HgaI GACGC 1 cut(s) 389
HhaI GCGC 1 cut(s) 516
Hin1II CATG 2 cut(s) 839, 915
Hin6I GCGC 1 cut(s) 514
HinP1I GCGC 1 cut(s) 514
HinfI GANTC 4 cut(s) 161, 336, 778, 784
HpaII CCGG 1 cut(s) 186
HphI GGTGA 4 cut(s) 5, 106, 400, 670
Hpy166II GTNNAC 2 cut(s) 309, 391
Hpy188I TCNGA 6 cut(s) 160, 327, 442, 579, 777, 783
Hpy188III TCNNGA 9 cut(s) 209, 217, 239, 271, 290, 340, 682, 752, 947
Hpy8I GTNNAC 2 cut(s) 309, 391
HpyAV CCTTC 2 cut(s) 91, 722
HpyCH4III ACNGT 2 cut(s) 446, 904
HpyCH4V TGCA 6 cut(s) 42, 120, 626, 632, 865, 964
HpyF10VI GCNNNNNNNGC 4 cut(s) 274, 283, 380, 505
HpyF3I CTNAG 9 cut(s) 151, 157, 326, 362, 384, 426, 453, 644, 972
Hsp92II CATG 2 cut(s) 839, 915
HspAI GCGC 1 cut(s) 514
KpnI GGTACC 1 cut(s) 598
Kzo9I GATC 3 cut(s) 579, 689, 748
LguI GCTCTTC 2 cut(s) 284, 404
LmnI GCTCC 1 cut(s) 479
Lsp1109I GCAGC 4 cut(s) 616, 638, 939, 963
LweI GCATC 2 cut(s) 712, 945
MabI ACCWGGT 1 cut(s) 597
MaeI CTAG 3 cut(s) 726, 762, 1000
MaeIII GTNAC 2 cut(s) 812, 947
MalI GATC 3 cut(s) 581, 691, 750
MbiI CCGCTC 1 cut(s) 268
MboI GATC 3 cut(s) 579, 689, 748
MboII GAAGA 7 cut(s) 49, 118, 271, 421, 835, 838, 866
MhlI GDGCHC 2 cut(s) 325, 332
MluCI AATT 6 cut(s) 179, 212, 242, 662, 744, 982
MlyI GAGTC 1 cut(s) 170
MroXI GAANNNNTTC 1 cut(s) 278
MseI TTAA 3 cut(s) 533, 881, 932
MspA1I CMGCKG 3 cut(s) 318, 629, 976
MspI CCGG 1 cut(s) 186
MspR9I CCNGG 5 cut(s) 186, 549, 599, 612, 875
Mva1269I GAATGC 1 cut(s) 729
MvaI CCWGG 4 cut(s) 549, 599, 612, 875
MwoI GCNNNNNNNGC 4 cut(s) 274, 283, 380, 505
NciI CCSGG 1 cut(s) 186
NcoI CCATGG 1 cut(s) 911
NdeI CATATG 1 cut(s) 966
NdeII GATC 3 cut(s) 579, 689, 748
NheI GCTAGC 1 cut(s) 725
NlaIII CATG 2 cut(s) 839, 915
NlaIV GGNNCC 2 cut(s) 349, 596
NmeAIII GCCGAG 1 cut(s) 424
NmuCI GTSAC 2 cut(s) 812, 947
NspV TTCGAA 1 cut(s) 246
PaeR7I CTCGAG 1 cut(s) 269
PaqCI CACCTGC 1 cut(s) 125
PciSI GCTCTTC 2 cut(s) 284, 404
PctI GAATGC 1 cut(s) 729
PdmI GAANNNNTTC 1 cut(s) 278
PfeI GAWTC 3 cut(s) 336, 778, 784
PfoI TCCNGGA 1 cut(s) 873
PkrI GCNGC 5 cut(s) 628, 631, 909, 929, 978
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
Psp6I CCWGG 4 cut(s) 547, 597, 610, 873
PspFI CCCAGC 1 cut(s) 769
PspGI CCWGG 4 cut(s) 547, 597, 610, 873
PspN4I GGNNCC 2 cut(s) 349, 596
PspPI GGNCC 1 cut(s) 348
PvuII CAGCTG 2 cut(s) 629, 976
RsaI GTAC 3 cut(s) 308, 371, 596
RsaNI GTAC 3 cut(s) 307, 370, 595
SapI GCTCTTC 2 cut(s) 284, 404
SaqAI TTAA 3 cut(s) 533, 881, 932
SatI GCNGC 5 cut(s) 627, 630, 908, 928, 977
Sau3AI GATC 3 cut(s) 579, 689, 748
Sau96I GGNCC 1 cut(s) 348
SchI GAGTC 1 cut(s) 170
ScrFI CCNGG 5 cut(s) 186, 549, 599, 612, 875
SduI GDGCHC 2 cut(s) 325, 332
SexAI ACCWGGT 1 cut(s) 597
SfaNI GCATC 2 cut(s) 712, 945
Sfr274I CTCGAG 1 cut(s) 269
SfuI TTCGAA 1 cut(s) 246
SinI GGWCC 1 cut(s) 348
SlaI CTCGAG 1 cut(s) 269
SmlI CTYRAG 3 cut(s) 207, 269, 992
SmoI CTYRAG 3 cut(s) 207, 269, 992
Sse9I AATT 6 cut(s) 179, 212, 242, 662, 744, 982
SsiI CCGC 7 cut(s) 132, 266, 318, 635, 820, 908, 979
SspI AATATT 1 cut(s) 355
SspMI CTAG 3 cut(s) 726, 762, 1000
StyD4I CCNGG 5 cut(s) 184, 547, 597, 610, 873
StyI CCWWGG 1 cut(s) 911
TaaI ACNGT 2 cut(s) 446, 904
TaqI TCGA 7 cut(s) 143, 198, 216, 228, 246, 258, 270
TasI AATT 6 cut(s) 179, 212, 242, 662, 744, 982
TatI WGTACW 1 cut(s) 306
TauI GCSGC 1 cut(s) 910
TfiI GAWTC 3 cut(s) 336, 778, 784
Tru1I TTAA 3 cut(s) 533, 881, 932
Tru9I TTAA 3 cut(s) 533, 881, 932
TscAI CASTG 2 cut(s) 421, 909
TseFI GTSAC 2 cut(s) 812, 947
TseI GCWGC 4 cut(s) 626, 629, 927, 976
Tsp45I GTSAC 2 cut(s) 812, 947
TspRI CASTG 2 cut(s) 421, 909
VpaK11BI GGWCC 1 cut(s) 348
XapI RAATTY 3 cut(s) 212, 242, 662
XhoI CTCGAG 1 cut(s) 269
XmnI GAANNNNTTC 1 cut(s) 278
XspI CTAG 3 cut(s) 726, 762, 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.