Prupe.1G456100_v2.0.a1

AIG2-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0010238
Physical Location & Seq
Reverse (-)
38267122 .. 38269100
1979 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G456100.2

Sequence Viewer

Length: 537 bp
ATGAGTGCAATGAGCTCAGTGGCGATGGCTCAGTCTCAGAGCCTTCACAAAGTGTTCGTGTACGGCAGCCTCATGGCGGAGGACGTTTGCAGAGTCCTCTTAAATCGCGTCCCTCAATCTTCCCCTGCCATCCTCAATGGCTACCATAGGTATAGCATCAAAGGACGAGTTTATCCGGCGATTCTACCGGTTGAGAATGACAAAGTTACTGGCAAGCTCCTGTTGGGCATCACAGATCCTGAATTACACATTCTGGATGAATTTGAGGATGTTGAGTATGAGAGGAGCACTGTTGAGGTCTCCTCGGTGGATAGTTCTGACAACTTGTTAGTTCAAGCTTACGTTTGGAGCAACAAAAGTGATCCAAATTTGTATGGAGATTGGAATTTTGAGGAATGGAAGCAAATACACAAGAAAGATTTTATCAAGATGACTACGGGTTTCATAGAAGAGCTGGAGCTGCCTGAAGCAAAGCCGAGAGTTGCAACATATGAATCATTTTTTCAGCAGGGTCCTGAGAATCCCGCCGCGTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GGACT

Protein Analysis

179

Amino Acids

20.15

Weight (kDa)

4.82

Isoelectric Point (pI)

58.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 108, 530
AciI CCGC 3 cut(s) 77, 525, 528
AclWI GGATC 2 cut(s) 230, 356
AcsI RAATTY 3 cut(s) 260, 367, 385
AcuI CTGAAG 1 cut(s) 486
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 1 cut(s) 62
AfiI CCNNNNNNNGG 1 cut(s) 76
AgeI ACCGGT 1 cut(s) 187
AgsI TTSAA 1 cut(s) 335
AluBI AGCT 5 cut(s) 15, 217, 338, 454, 460
AluI AGCT 5 cut(s) 15, 217, 338, 454, 460
Alw21I GWGCWC 2 cut(s) 17, 290
Alw26I GTCTC 2 cut(s) 39, 304
AlwI GGATC 2 cut(s) 230, 356
AlwNI CAGNNNCTG 1 cut(s) 239
ApeKI GCWGC 2 cut(s) 66, 460
ApoI RAATTY 3 cut(s) 260, 367, 385
AsiGI ACCGGT 1 cut(s) 187
AspS9I GGNCC 1 cut(s) 512
AvaII GGWCC 1 cut(s) 512
BanII GRGCYC 1 cut(s) 17
Bbv12I GWGCWC 2 cut(s) 17, 290
BbvI GCAGC 2 cut(s) 78, 447
BccI CCATC 2 cut(s) 19, 137
BceAI ACGGC 1 cut(s) 79
BcoDI GTCTC 2 cut(s) 39, 304
BisI GCNGC 3 cut(s) 67, 461, 528
BlsI GCNGC 3 cut(s) 68, 462, 529
Bme18I GGWCC 1 cut(s) 512
BmgT120I GGNCC 1 cut(s) 512
BmiI GGNNCC 1 cut(s) 513
BmsI GCATC 2 cut(s) 165, 237
BplI GAGNNNNNCTC 2 cut(s) 287, 319
BpmI CTGGAG 1 cut(s) 476
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 1 cut(s) 303
BsaWI WCCGGW 1 cut(s) 187
Bsc4I CCNNNNNNNGG 1 cut(s) 76
Bse118I RCCGGY 1 cut(s) 187
Bse1I ACTGG 1 cut(s) 214
Bse3DI GCAATG 1 cut(s) 15
BseDI CCNNGG 1 cut(s) 303
BseGI GGATG 3 cut(s) 129, 262, 274
BseLI CCNNNNNNNGG 1 cut(s) 76
BseMI GCAATG 1 cut(s) 15
BseMII CTCAG 4 cut(s) 30, 44, 50, 507
BseNI ACTGG 1 cut(s) 214
BseRI GAGGAG 2 cut(s) 292, 298
BseXI GCAGC 2 cut(s) 78, 447
Bsh1236I CGCG 2 cut(s) 108, 530
BshTI ACCGGT 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 17, 290
BsiSI CCGG 2 cut(s) 176, 188
BslFI GGGAC 1 cut(s) 95
BslI CCNNNNNNNGG 1 cut(s) 76
BsmAI GTCTC 2 cut(s) 39, 304
BsmFI GGGAC 1 cut(s) 95
Bso31I GGTCTC 1 cut(s) 304
Bsp1286I GDGCHC 2 cut(s) 17, 290
Bsp143I GATC 2 cut(s) 235, 361
BspACI CCGC 3 cut(s) 77, 525, 528
BspCNI CTCAG 4 cut(s) 29, 43, 49, 508
BspFNI CGCG 2 cut(s) 108, 530
BspLI GGNNCC 1 cut(s) 513
BspPI GGATC 2 cut(s) 230, 356
BspQI GCTCTTC 1 cut(s) 444
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 1 cut(s) 15
BsrFI RCCGGY 1 cut(s) 187
BsrI ACTGG 1 cut(s) 214
BssAI RCCGGY 1 cut(s) 187
BssECI CCNNGG 1 cut(s) 303
BssMI GATC 2 cut(s) 235, 361
Bst4CI ACNGT 1 cut(s) 292
Bst6I CTCTTC 1 cut(s) 444
BstC8I GCNNGC 1 cut(s) 215
BstDEI CTNAG 4 cut(s) 16, 30, 36, 516
BstF5I GGATG 3 cut(s) 129, 262, 274
BstFNI CGCG 2 cut(s) 108, 530
BstKTI GATC 2 cut(s) 238, 364
BstMAI GTCTC 2 cut(s) 39, 304
BstMBI GATC 2 cut(s) 235, 361
BstMWI GCNNNNNNNGC 1 cut(s) 460
BstUI CGCG 2 cut(s) 108, 530
BstV1I GCAGC 2 cut(s) 78, 447
BstX2I RGATCY 1 cut(s) 235
BstYI RGATCY 1 cut(s) 235
BtgZI GCGATG 1 cut(s) 38
BtsCI GGATG 3 cut(s) 129, 262, 274
BtsIMutI CAGTG 2 cut(s) 24, 288
Cac8I GCNNGC 1 cut(s) 215
CaiI CAGNNNCTG 1 cut(s) 239
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 1 cut(s) 512
CseI GACGC 2 cut(s) 97, 519
Csp6I GTAC 1 cut(s) 61
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 1 cut(s) 73
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 4 cut(s) 16, 30, 36, 516
DpnI GATC 2 cut(s) 237, 363
DpnII GATC 2 cut(s) 235, 361
DraIII CACNNNGTG 1 cut(s) 52
Eam1104I CTCTTC 1 cut(s) 444
EarI CTCTTC 1 cut(s) 444
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 1 cut(s) 15
Eco24I GRGCYC 1 cut(s) 17
Eco31I GGTCTC 1 cut(s) 304
Eco47I GGWCC 1 cut(s) 512
Eco53kI GAGCTC 1 cut(s) 15
Eco57I CTGAAG 1 cut(s) 486
EcoICRI GAGCTC 1 cut(s) 15
EcoO109I RGGNCCY 1 cut(s) 512
EcoT38I GRGCYC 1 cut(s) 17
FaeI CATG 1 cut(s) 76
FaiI YATR 8 cut(s) 74, 147, 153, 279, 375, 446, 490, 492
FaqI GGGAC 1 cut(s) 95
FatI CATG 1 cut(s) 72
FauI CCCGC 1 cut(s) 532
FauNDI CATATG 1 cut(s) 490
Fnu4HI GCNGC 3 cut(s) 67, 461, 528
FokI GGATG 3 cut(s) 116, 269, 281
FriOI GRGCYC 1 cut(s) 17
Fsp4HI GCNGC 3 cut(s) 67, 461, 528
GluI GCNGC 3 cut(s) 67, 461, 528
GsuI CTGGAG 1 cut(s) 476
HapII CCGG 2 cut(s) 176, 188
HgaI GACGC 2 cut(s) 97, 519
Hin1II CATG 1 cut(s) 76
HindIII AAGCTT 1 cut(s) 336
HinfI GANTC 4 cut(s) 93, 181, 494, 520
HpaII CCGG 2 cut(s) 176, 188
Hpy166II GTNNAC 1 cut(s) 61
Hpy188I TCNGA 2 cut(s) 39, 319
Hpy188III TCNNGA 5 cut(s) 239, 254, 427, 515, 534
Hpy8I GTNNAC 1 cut(s) 61
Hpy99I CGWCG 1 cut(s) 535
HpyAV CCTTC 1 cut(s) 53
HpyCH4III ACNGT 1 cut(s) 292
HpyCH4IV ACGT 2 cut(s) 84, 342
HpyCH4V TGCA 3 cut(s) 8, 90, 485
HpyF10VI GCNNNNNNNGC 1 cut(s) 460
HpyF3I CTNAG 4 cut(s) 16, 30, 36, 516
HpySE526I ACGT 2 cut(s) 84, 342
Hsp92II CATG 1 cut(s) 76
Kzo9I GATC 2 cut(s) 235, 361
LguI GCTCTTC 1 cut(s) 444
LmnI GCTCC 4 cut(s) 222, 285, 348, 457
Lsp1109I GCAGC 2 cut(s) 78, 447
LweI GCATC 2 cut(s) 165, 237
MaeII ACGT 2 cut(s) 84, 342
MaeIII GTNAC 1 cut(s) 205
MalI GATC 2 cut(s) 237, 363
MboI GATC 2 cut(s) 235, 361
MboII GAAGA 2 cut(s) 111, 461
MflI RGATCY 1 cut(s) 235
MhlI GDGCHC 2 cut(s) 17, 290
MluCI AATT 4 cut(s) 242, 260, 367, 385
MlyI GAGTC 1 cut(s) 102
MseI TTAA 1 cut(s) 101
MspI CCGG 2 cut(s) 176, 188
MvnI CGCG 2 cut(s) 108, 530
MwoI GCNNNNNNNGC 1 cut(s) 460
NdeI CATATG 1 cut(s) 490
NdeII GATC 2 cut(s) 235, 361
NlaIII CATG 1 cut(s) 76
NlaIV GGNNCC 1 cut(s) 513
NmeAIII GCCGAG 1 cut(s) 501
PciSI GCTCTTC 1 cut(s) 444
PfeI GAWTC 3 cut(s) 181, 494, 520
PinAI ACCGGT 1 cut(s) 187
PkrI GCNGC 3 cut(s) 68, 462, 529
PleI GAGTC 1 cut(s) 101
PpsI GAGTC 1 cut(s) 101
PpuMI RGGWCCY 1 cut(s) 512
Psp124BI GAGCTC 1 cut(s) 17
Psp5II RGGWCCY 1 cut(s) 512
PspN4I GGNNCC 1 cut(s) 513
PspPI GGNCC 1 cut(s) 512
PspPPI RGGWCCY 1 cut(s) 512
PstNI CAGNNNCTG 1 cut(s) 239
PsuI RGATCY 1 cut(s) 235
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
SacI GAGCTC 1 cut(s) 17
SapI GCTCTTC 1 cut(s) 444
SaqAI TTAA 1 cut(s) 101
SatI GCNGC 3 cut(s) 67, 461, 528
Sau3AI GATC 2 cut(s) 235, 361
Sau96I GGNCC 1 cut(s) 512
SchI GAGTC 1 cut(s) 102
SduI GDGCHC 2 cut(s) 17, 290
SetI ASST 9 cut(s) 17, 87, 152, 219, 300, 340, 345, 456, 462
SfaNI GCATC 2 cut(s) 165, 237
SinI GGWCC 1 cut(s) 512
Sse9I AATT 4 cut(s) 242, 260, 367, 385
SsiI CCGC 3 cut(s) 77, 525, 528
SstI GAGCTC 1 cut(s) 17
TaaI ACNGT 1 cut(s) 292
TaiI ACGT 2 cut(s) 87, 345
TasI AATT 4 cut(s) 242, 260, 367, 385
TauI GCSGC 1 cut(s) 530
TfiI GAWTC 3 cut(s) 181, 494, 520
Tru1I TTAA 1 cut(s) 101
Tru9I TTAA 1 cut(s) 101
TscAI CASTG 2 cut(s) 24, 295
TseI GCWGC 2 cut(s) 66, 460
TspDTI ATGAA 3 cut(s) 273, 433, 507
TspRI CASTG 2 cut(s) 24, 295
VpaK11BI GGWCC 1 cut(s) 512
XapI RAATTY 3 cut(s) 260, 367, 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.