60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G36240 AT1G77940 AT3G18740 |
| fragaria_vesca | FvH4_5g28040 FvH4_5g38130 FvH4_7g04710 |
| malus_domestica | MD08G1176600.v1.1 MD15G1363000.v1.1 MD15G1431500.v1.1 |
| prunus_persica | Prupe.1G096700_v2.0.a1 Prupe.1G511000_v2.0.a1 |
| pyrus_communis | pycom08g15150 pycom15g32500 pycom15g38130 |
| rosa_chinensis | RchiOBHm_Chr6g0275411 RchiOBHm_Chr7g0240111 |
| rosa_laevigata | RLG00000000705 RLG00000013464 |
| rosa_multiflora | Rmu_sc0005008.1_g000029 Rmu_sc0007358.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00220410 Rroxscaffold_7G00193340 |
| rosa_rugosa | Rorug06G0091900 Rorug07G0333300 |
| rosa_samantha | Rh6BG208400 Rh6DG200900 Rh7AG486900 |
| rosa_wichuraiana | Rw6G017820 Rw7G040800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 140 |
| AarI | CACCTGC | 1 cut(s) | 287 |
| Acc36I | ACCTGC | 1 cut(s) | 287 |
| AccB1I | GGYRCC | 1 cut(s) | 7 |
| AciI | CCGC | 1 cut(s) | 166 |
| AfaI | GTAC | 3 cut(s) | 80, 92, 247 |
| AjnI | CCWGG | 2 cut(s) | 47, 325 |
| ApeKI | GCWGC | 1 cut(s) | 322 |
| AsuHPI | GGTGA | 3 cut(s) | 73, 206, 311 |
| BanI | GGYRCC | 1 cut(s) | 7 |
| BbsI | GAAGAC | 2 cut(s) | 23, 32 |
| BbvI | GCAGC | 1 cut(s) | 309 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 258, 285, 292, 319 |
| BciT130I | CCWGG | 2 cut(s) | 49, 327 |
| BfuAI | ACCTGC | 1 cut(s) | 287 |
| BisI | GCNGC | 1 cut(s) | 323 |
| BlsI | GCNGC | 1 cut(s) | 324 |
| Bme1390I | CCNGG | 2 cut(s) | 49, 327 |
| BmiI | GGNNCC | 1 cut(s) | 9 |
| BmrFI | CCNGG | 2 cut(s) | 49, 327 |
| BmsI | GCATC | 3 cut(s) | 48, 283, 294 |
| BpiI | GAAGAC | 2 cut(s) | 23, 32 |
| Bpu10I | CCTNAGC | 1 cut(s) | 281 |
| BsaJI | CCNNGG | 1 cut(s) | 201 |
| BseBI | CCWGG | 2 cut(s) | 49, 327 |
| BseDI | CCNNGG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 1 cut(s) | 150 |
| BseXI | GCAGC | 1 cut(s) | 309 |
| BshNI | GGYRCC | 1 cut(s) | 7 |
| Bsp143I | GATC | 1 cut(s) | 238 |
| BspACI | CCGC | 1 cut(s) | 166 |
| BspLI | GGNNCC | 1 cut(s) | 9 |
| BspMI | ACCTGC | 1 cut(s) | 287 |
| BspT107I | GGYRCC | 1 cut(s) | 7 |
| BssECI | CCNNGG | 1 cut(s) | 201 |
| BssMI | GATC | 1 cut(s) | 238 |
| BssT1I | CCWWGG | 1 cut(s) | 201 |
| Bst2UI | CCWGG | 2 cut(s) | 49, 327 |
| Bst4CI | ACNGT | 1 cut(s) | 100 |
| Bst6I | CTCTTC | 2 cut(s) | 62, 117 |
| BstC8I | GCNNGC | 2 cut(s) | 54, 198 |
| BstDEI | CTNAG | 1 cut(s) | 281 |
| BstKTI | GATC | 1 cut(s) | 241 |
| BstMBI | GATC | 1 cut(s) | 238 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 197 |
| BstNI | CCWGG | 2 cut(s) | 49, 327 |
| BstNSI | RCATGY | 1 cut(s) | 255 |
| BstSCI | CCNGG | 2 cut(s) | 47, 325 |
| BstV1I | GCAGC | 1 cut(s) | 309 |
| BstV2I | GAAGAC | 2 cut(s) | 23, 32 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 224 |
| BveI | ACCTGC | 1 cut(s) | 287 |
| Cac8I | GCNNGC | 2 cut(s) | 54, 198 |
| CseI | GACGC | 1 cut(s) | 328 |
| Csp6I | GTAC | 3 cut(s) | 79, 91, 246 |
| CviAII | CATG | 3 cut(s) | 32, 252, 276 |
| CviJI | RGCY | 1 cut(s) | 52 |
| CviKI_1 | RGCY | 1 cut(s) | 52 |
| CviQI | GTAC | 3 cut(s) | 79, 91, 246 |
| DdeI | CTNAG | 1 cut(s) | 281 |
| DpnI | GATC | 1 cut(s) | 240 |
| DpnII | GATC | 1 cut(s) | 238 |
| Eam1104I | CTCTTC | 2 cut(s) | 62, 117 |
| EarI | CTCTTC | 2 cut(s) | 62, 117 |
| Eco130I | CCWWGG | 1 cut(s) | 201 |
| EcoRII | CCWGG | 2 cut(s) | 47, 325 |
| EcoT14I | CCWWGG | 1 cut(s) | 201 |
| ErhI | CCWWGG | 1 cut(s) | 201 |
| FaeI | CATG | 3 cut(s) | 35, 255, 279 |
| FaiI | YATR | 5 cut(s) | 33, 140, 194, 253, 277 |
| FatI | CATG | 3 cut(s) | 31, 251, 275 |
| Fnu4HI | GCNGC | 1 cut(s) | 323 |
| Fsp4HI | GCNGC | 1 cut(s) | 323 |
| GluI | GCNGC | 1 cut(s) | 323 |
| HgaI | GACGC | 1 cut(s) | 328 |
| Hin1II | CATG | 3 cut(s) | 35, 255, 279 |
| HinfI | GANTC | 2 cut(s) | 107, 302 |
| HphI | GGTGA | 3 cut(s) | 73, 206, 311 |
| Hpy166II | GTNNAC | 2 cut(s) | 81, 214 |
| Hpy188I | TCNGA | 3 cut(s) | 175, 269, 307 |
| Hpy188III | TCNNGA | 1 cut(s) | 316 |
| Hpy8I | GTNNAC | 2 cut(s) | 81, 214 |
| HpyCH4III | ACNGT | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 1 cut(s) | 296 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 197 |
| HpyF3I | CTNAG | 1 cut(s) | 281 |
| Hsp92II | CATG | 3 cut(s) | 35, 255, 279 |
| Kzo9I | GATC | 1 cut(s) | 238 |
| LpnPI | CCDG | 6 cut(s) | 34, 44, 61, 71, 282, 312 |
| Lsp1109I | GCAGC | 1 cut(s) | 309 |
| LweI | GCATC | 3 cut(s) | 48, 283, 294 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MalI | GATC | 1 cut(s) | 240 |
| MboI | GATC | 1 cut(s) | 238 |
| MboII | GAAGA | 6 cut(s) | 25, 28, 34, 37, 79, 104 |
| MluCI | AATT | 1 cut(s) | 141 |
| MlyI | GAGTC | 1 cut(s) | 101 |
| MmeI | TCCRAC | 1 cut(s) | 187 |
| MnlI | CCTC | 2 cut(s) | 168, 171 |
| MslI | CAYNNNNRTG | 1 cut(s) | 222 |
| MspR9I | CCNGG | 2 cut(s) | 49, 327 |
| MvaI | CCWGG | 2 cut(s) | 49, 327 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 197 |
| NdeII | GATC | 1 cut(s) | 238 |
| NlaIII | CATG | 3 cut(s) | 35, 255, 279 |
| NlaIV | GGNNCC | 1 cut(s) | 9 |
| NspI | RCATGY | 1 cut(s) | 255 |
| PaqCI | CACCTGC | 1 cut(s) | 287 |
| PfeI | GAWTC | 1 cut(s) | 302 |
| PkrI | GCNGC | 1 cut(s) | 324 |
| PleI | GAGTC | 1 cut(s) | 101 |
| PpsI | GAGTC | 1 cut(s) | 101 |
| PsiI | TTATAA | 1 cut(s) | 140 |
| Psp6I | CCWGG | 2 cut(s) | 47, 325 |
| PspGI | CCWGG | 2 cut(s) | 47, 325 |
| PspN4I | GGNNCC | 1 cut(s) | 9 |
| RsaI | GTAC | 3 cut(s) | 80, 92, 247 |
| RsaNI | GTAC | 3 cut(s) | 79, 91, 246 |
| RseI | CAYNNNNRTG | 1 cut(s) | 222 |
| SatI | GCNGC | 1 cut(s) | 323 |
| Sau3AI | GATC | 1 cut(s) | 238 |
| SchI | GAGTC | 1 cut(s) | 101 |
| ScrFI | CCNGG | 2 cut(s) | 49, 327 |
| SetI | ASST | 2 cut(s) | 207, 301 |
| SfaNI | GCATC | 3 cut(s) | 48, 283, 294 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 222 |
| Sse9I | AATT | 1 cut(s) | 141 |
| SsiI | CCGC | 1 cut(s) | 166 |
| StyD4I | CCNGG | 2 cut(s) | 47, 325 |
| StyI | CCWWGG | 1 cut(s) | 201 |
| TaaI | ACNGT | 1 cut(s) | 100 |
| TaqI | TCGA | 2 cut(s) | 105, 180 |
| TasI | AATT | 1 cut(s) | 141 |
| TatI | WGTACW | 1 cut(s) | 78 |
| TfiI | GAWTC | 1 cut(s) | 302 |
| TseI | GCWGC | 1 cut(s) | 322 |
| TspDTI | ATGAA | 2 cut(s) | 80, 264 |
| XceI | RCATGY | 1 cut(s) | 255 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 55 |