Prupe.2G100900_v2.0.a1

Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
15687990 .. 15692624
4635 bp
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UTR
Exon/CDS
Intron
Prupe.2G100900.2

Sequence Viewer

Length: 1425 bp
ATGCCGAGAGAGATAATCACATTGCAGGTCGGACAATGCGGGAACCAGATAGGCATGGAGTTCTGGAAGCAGCTCTGCCTCGAGCATGGAATCAGCAAAGACGGAATTCTCGAGGACTTTGCCACTCAGGGTGGTGACCGGAAAGATGTGTTTTTCTATCAAGCTGATGATCAGCACTACATACCGCGAGCTTTGCTGATCGACCTGGAGCCTAGAGTAATTAACGGTATTCAAAACAGCGAATATCGAAATCTCTATAATCATGAAAACATCTTTGTTTCGGATCATGGAGGTGGGGCAGGAAATAATTGGGCCAGTGGATATGATCAGGGAAAGGGTGTTGAAGAGGCTATAATGGACATGATTGATAGAGAAGCTGATGGGAGTGACAGTCTTGAAGGATTTGTTCTGTGCCATTCTATTGCTGGAGGAACAGGCTCAGGCATGGGTTCCTATCTGTTGGAGACTTTGAATGATCGATACAGCAAAAAACTGGTTCAGACATACAGTGTATTTCCTAACCAGATGGAAACAAGTGATGTGGTGGTCCAGCCCTATAACTCACTTTTGACGCTTAAACGACTAACGCTTAATGCTGATTGTGTTGTGGTCCTTGATAACACCGCCTTGAATAGAATTGCTGTTGAGCGTCTTCATTTATCAAATCCAACCTTTGCTCAAACAAATTCTTTGGTTTCTACTGTAATGTCTGCCAGCACAACCACTCTGAGGTATCCAGGGTACATGAACAATGATTTGGTTGGTCTTCTTGCATCTTTAATTCCAACACCAAGATGCCATTTTCTAATGACAGGGTATACACCCCTCACAGTTGAGCGCCAGGCCAATGTGATTCGCAAAACCACTGTACTTGATGTTATGAGAAGACTTCTGCAGACAAAAAATATAATGGTTTCCTCATATGCTCGAACAAAAGAAGCTAGTCAAGCGAAGTACATCTCAATATTAAACATCATTCAAGGAGAAGTTGACCCTACTCAGGTTCATGAAAGTTTGCAGAGGATACGTGAAAGAAAGCTCGTTAACTTTATTGAATGGGGCCCTGCAAGCATTCAGGTTGCTTTGTCTAGAAAGTCTCCATATGTGCAAACAGCCCATAGGGTCAGTGGTCTTATGCTGGCAAGCCATACTAGTATTCGCCATCTTTTCAGTAAGTGTTTGAGCCAGTATATGATGTTAAGAAAGAAGCAAGCCTTTCTTGACAACTATCGGAAGTTTCCAATGTTTGCTGAGAATGACCTTTCGGAATTTGACGAATCAAGAGAGATACTTGAGAGTTTGGTTGAGGAATATAAGGCCTGTGAGTCCCCAGATTACATCAAATGGGGAATGGAGGATCCAGACCACGTTCTTACAGGAGAAGGCAATGCAGCAGGAACAGTGGACCCAAAATTGGCAGTATGA

Protein Analysis

475

Amino Acids

53.25

Weight (kDa)

5.61

Isoelectric Point (pI)

30.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 16
AccI GTMKAC 1 cut(s) 818
AccII CGCG 1 cut(s) 187
AciI CCGC 3 cut(s) 39, 185, 624
AclWI GGATC 3 cut(s) 291, 1352, 1365
AcsI RAATTY 3 cut(s) 105, 685, 1268
AfaI GTAC 3 cut(s) 743, 870, 956
AfiI CCNNNNNNNGG 3 cut(s) 729, 1000, 1414
AgsI TTSAA 7 cut(s) 233, 344, 398, 472, 631, 980, 1055
AhlI ACTAGT 1 cut(s) 1151
AjnI CCWGG 3 cut(s) 204, 736, 840
AjuI GAANNNNNNNTTGG 2 cut(s) 740, 772
AluBI AGCT 6 cut(s) 73, 164, 191, 377, 941, 1039
AluI AGCT 6 cut(s) 73, 164, 191, 377, 941, 1039
Alw26I GTCTC 2 cut(s) 458, 1101
AlwI GGATC 3 cut(s) 291, 1352, 1365
Ama87I CYCGRG 2 cut(s) 80, 110
AoxI GGCC 4 cut(s) 312, 843, 1060, 1317
ApaI GGGCCC 1 cut(s) 1064
ApeKI GCWGC 2 cut(s) 70, 1391
ApoI RAATTY 3 cut(s) 105, 685, 1268
AspLEI GCGC 1 cut(s) 840
AspS9I GGNCC 6 cut(s) 312, 547, 610, 1060, 1061, 1405
AsuHPI GGTGA 1 cut(s) 146
AvaI CYCGRG 2 cut(s) 80, 110
AvaII GGWCC 3 cut(s) 547, 610, 1405
BaeGI GKGCMC 1 cut(s) 1064
BamHI GGATCC 1 cut(s) 1357
BanII GRGCYC 1 cut(s) 1064
BbsI GAAGAC 3 cut(s) 644, 758, 892
BbvI GCAGC 2 cut(s) 82, 1403
BccI CCATC 3 cut(s) 374, 520, 1170
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 3 cut(s) 206, 738, 842
BciVI GTATCC 2 cut(s) 744, 1017
BclI TGATCA 2 cut(s) 169, 325
BcoDI GTCTC 2 cut(s) 458, 1101
BcuI ACTAGT 1 cut(s) 1151
BfaI CTAG 4 cut(s) 213, 942, 1089, 1152
BfmI CTRYAG 1 cut(s) 893
BfoI RGCGCY 1 cut(s) 841
BfuAI ACCTGC 1 cut(s) 16
BfuI GTATCC 2 cut(s) 744, 1017
BisI GCNGC 2 cut(s) 71, 1392
BlsI GCNGC 2 cut(s) 72, 1393
Bme1390I CCNGG 3 cut(s) 206, 738, 842
Bme18I GGWCC 3 cut(s) 547, 610, 1405
BmeT110I CYCGRG 2 cut(s) 80, 110
BmgT120I GGNCC 6 cut(s) 312, 547, 610, 1060, 1061, 1405
BmiI GGNNCC 7 cut(s) 44, 210, 451, 1061, 1062, 1359, 1407
BmrFI CCNGG 3 cut(s) 206, 738, 842
BmsI GCATC 2 cut(s) 782, 785
BpiI GAAGAC 3 cut(s) 644, 758, 892
BpmI CTGGAG 2 cut(s) 227, 447
Bpu10I CCTNAGC 1 cut(s) 439
BpuEI CTTGAG 1 cut(s) 1313
Bsa29I ATCGAT 1 cut(s) 478
BsaAI YACGTR 1 cut(s) 1028
BsaJI CCNNGG 1 cut(s) 737
BsaWI WCCGGW 1 cut(s) 138
BsaXI ACNNNNNCTCC 2 cut(s) 376, 406
Bsc4I CCNNNNNNNGG 3 cut(s) 729, 1000, 1414
Bse1I ACTGG 3 cut(s) 315, 498, 1186
Bse3DI GCAATG 2 cut(s) 20, 1393
BseBI CCWGG 3 cut(s) 206, 738, 842
BseCI ATCGAT 1 cut(s) 478
BseDI CCNNGG 1 cut(s) 737
BseLI CCNNNNNNNGG 3 cut(s) 729, 1000, 1414
BseMI GCAATG 2 cut(s) 20, 1393
BseMII CTCAG 5 cut(s) 140, 453, 719, 1013, 1242
BseNI ACTGG 3 cut(s) 315, 498, 1186
BseSI GKGCMC 1 cut(s) 1064
BseXI GCAGC 2 cut(s) 82, 1403
Bsh1236I CGCG 1 cut(s) 187
BshFI GGCC 4 cut(s) 314, 845, 1062, 1319
BshVI ATCGAT 1 cut(s) 478
BsiHKCI CYCGRG 2 cut(s) 80, 110
BsiSI CCGG 1 cut(s) 139
BslFI GGGAC 1 cut(s) 1312
BslI CCNNNNNNNGG 3 cut(s) 729, 1000, 1414
BsmAI GTCTC 2 cut(s) 458, 1101
BsmFI GGGAC 1 cut(s) 1312
BsmI GAATGC 1 cut(s) 1071
BsnI GGCC 4 cut(s) 314, 845, 1062, 1319
BsoBI CYCGRG 2 cut(s) 80, 110
Bsp120I GGGCCC 1 cut(s) 1060
Bsp1286I GDGCHC 1 cut(s) 1064
Bsp143I GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
BspACI CCGC 3 cut(s) 39, 185, 624
BspANI GGCC 4 cut(s) 314, 845, 1062, 1319
BspCNI CTCAG 5 cut(s) 139, 452, 720, 1012, 1243
BspDI ATCGAT 1 cut(s) 478
BspFNI CGCG 1 cut(s) 187
BspHI TCATGA 2 cut(s) 262, 1006
BspLI GGNNCC 7 cut(s) 44, 210, 451, 1061, 1062, 1359, 1407
BspMAI CTGCAG 1 cut(s) 897
BspMI ACCTGC 1 cut(s) 16
BspPI GGATC 3 cut(s) 291, 1352, 1365
BsrDI GCAATG 2 cut(s) 20, 1393
BsrI ACTGG 3 cut(s) 315, 498, 1186
BssECI CCNNGG 1 cut(s) 737
BssMI GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
BssNAI GTATAC 1 cut(s) 819
Bst1107I GTATAC 1 cut(s) 819
Bst2UI CCWGG 3 cut(s) 206, 738, 842
Bst4CI ACNGT 7 cut(s) 227, 392, 509, 703, 832, 868, 1402
Bst6I CTCTTC 1 cut(s) 339
BstBAI YACGTR 1 cut(s) 1028
BstC8I GCNNGC 6 cut(s) 189, 715, 1069, 1140, 1144, 1212
BstDEI CTNAG 5 cut(s) 126, 439, 728, 999, 1251
BstEII GGTNACC 1 cut(s) 134
BstFNI CGCG 1 cut(s) 187
BstH2I RGCGCY 1 cut(s) 841
BstHHI GCGC 1 cut(s) 840
BstKTI GATC 6 cut(s) 172, 201, 286, 328, 478, 1360
BstMAI GTCTC 2 cut(s) 458, 1101
BstMBI GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
BstMWI GCNNNNNNNGC 3 cut(s) 193, 947, 1068
BstNI CCWGG 3 cut(s) 206, 738, 842
BstPI GGTNACC 1 cut(s) 134
BstSCI CCNGG 3 cut(s) 204, 736, 840
BstSFI CTRYAG 1 cut(s) 893
BstSLI GKGCMC 1 cut(s) 1064
BstUI CGCG 1 cut(s) 187
BstV1I GCAGC 2 cut(s) 82, 1403
BstV2I GAAGAC 3 cut(s) 644, 758, 892
BstX2I RGATCY 1 cut(s) 1357
BstYI RGATCY 1 cut(s) 1357
BstZ17I GTATAC 1 cut(s) 819
Bsu15I ATCGAT 1 cut(s) 478
BsuI GTATCC 2 cut(s) 744, 1017
BsuRI GGCC 4 cut(s) 314, 845, 1062, 1319
BsuTUI ATCGAT 1 cut(s) 478
BtsIMutI CAGTG 5 cut(s) 322, 514, 864, 1132, 1407
BveI ACCTGC 1 cut(s) 16
Cac8I GCNNGC 6 cut(s) 189, 715, 1069, 1140, 1144, 1212
CciI TCATGA 2 cut(s) 262, 1006
CfoI GCGC 1 cut(s) 840
Cfr13I GGNCC 6 cut(s) 312, 547, 610, 1060, 1061, 1405
ClaI ATCGAT 1 cut(s) 478
CseI GACGC 2 cut(s) 580, 638
Csp6I GTAC 3 cut(s) 742, 869, 955
CspCI CAANNNNNGTGG 4 cut(s) 522, 557, 853, 888
CviAII CATG 8 cut(s) 55, 86, 263, 287, 361, 445, 745, 1007
CviQI GTAC 3 cut(s) 742, 869, 955
DdeI CTNAG 5 cut(s) 126, 439, 728, 999, 1251
DpnI GATC 6 cut(s) 171, 200, 285, 327, 477, 1359
DpnII GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
Eco147I AGGCCT 1 cut(s) 1319
Eco24I GRGCYC 1 cut(s) 1064
Eco47I GGWCC 3 cut(s) 547, 610, 1405
Eco88I CYCGRG 2 cut(s) 80, 110
Eco91I GGTNACC 1 cut(s) 134
EcoO109I RGGNCCY 2 cut(s) 1060, 1061
EcoO65I GGTNACC 1 cut(s) 134
EcoRI GAATTC 1 cut(s) 105
EcoRII CCWGG 3 cut(s) 204, 736, 840
EcoT38I GRGCYC 1 cut(s) 1064
FaeI CATG 8 cut(s) 58, 89, 266, 290, 364, 448, 748, 1010
FalI AAGNNNNNCTT 4 cut(s) 1199, 1231, 1203, 1235
FaqI GGGAC 1 cut(s) 1312
FatI CATG 8 cut(s) 54, 85, 262, 286, 360, 444, 744, 1006
FauI CCCGC 1 cut(s) 32
FauNDI CATATG 2 cut(s) 922, 1102
FbaI TGATCA 2 cut(s) 169, 325
FblI GTMKAC 1 cut(s) 818
Fnu4HI GCNGC 2 cut(s) 71, 1392
FriOI GRGCYC 1 cut(s) 1064
Fsp4HI GCNGC 2 cut(s) 71, 1392
FspBI CTAG 4 cut(s) 213, 942, 1089, 1152
GlaI GCGC 1 cut(s) 839
GluI GCNGC 2 cut(s) 71, 1392
GsuI CTGGAG 2 cut(s) 227, 447
HaeII RGCGCY 1 cut(s) 841
HaeIII GGCC 4 cut(s) 314, 845, 1062, 1319
HapII CCGG 1 cut(s) 139
HgaI GACGC 2 cut(s) 580, 638
HhaI GCGC 1 cut(s) 840
Hin1II CATG 8 cut(s) 58, 89, 266, 290, 364, 448, 748, 1010
Hin6I GCGC 1 cut(s) 838
HinP1I GCGC 1 cut(s) 838
HincII GTYRAC 2 cut(s) 991, 1045
HindII GTYRAC 2 cut(s) 991, 1045
HinfI GANTC 4 cut(s) 90, 853, 1277, 1325
HpaI GTTAAC 1 cut(s) 1045
HpaII CCGG 1 cut(s) 139
HphI GGTGA 1 cut(s) 146
Hpy166II GTNNAC 4 cut(s) 819, 991, 1045, 1405
Hpy188I TCNGA 6 cut(s) 32, 283, 501, 729, 1233, 1267
Hpy188III TCNNGA 9 cut(s) 64, 110, 263, 395, 1007, 1089, 1220, 1281, 1361
Hpy8I GTNNAC 4 cut(s) 819, 991, 1045, 1405
HpyAV CCTTC 2 cut(s) 392, 1376
HpyCH4III ACNGT 7 cut(s) 227, 392, 509, 703, 832, 868, 1402
HpyCH4IV ACGT 2 cut(s) 1027, 1368
HpyCH4V TGCA 7 cut(s) 25, 773, 895, 1018, 1067, 1108, 1391
HpyF10VI GCNNNNNNNGC 3 cut(s) 193, 947, 1068
HpyF3I CTNAG 5 cut(s) 126, 439, 728, 999, 1251
HpySE526I ACGT 2 cut(s) 1027, 1368
Hsp92II CATG 8 cut(s) 58, 89, 266, 290, 364, 448, 748, 1010
HspAI GCGC 1 cut(s) 838
Ksp22I TGATCA 2 cut(s) 169, 325
KspAI GTTAAC 1 cut(s) 1045
Kzo9I GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
LmnI GCTCC 1 cut(s) 208
Lsp1109I GCAGC 2 cut(s) 82, 1403
LweI GCATC 2 cut(s) 782, 785
MaeI CTAG 4 cut(s) 213, 942, 1089, 1152
MaeII ACGT 2 cut(s) 1027, 1368
MaeIII GTNAC 2 cut(s) 134, 386
MalI GATC 6 cut(s) 171, 200, 285, 327, 477, 1359
MboI GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
MboII GAAGA 4 cut(s) 356, 644, 758, 897
MflI RGATCY 1 cut(s) 1357
MhlI GDGCHC 1 cut(s) 1064
MluCI AATT 8 cut(s) 105, 219, 307, 636, 685, 780, 1268, 1412
MlyI GAGTC 1 cut(s) 1334
MmeI TCCRAC 4 cut(s) 10, 441, 692, 809
MseI TTAA 7 cut(s) 222, 576, 591, 779, 968, 1044, 1199
MslI CAYNNNNRTG 2 cut(s) 291, 793
MspI CCGG 1 cut(s) 139
MspR9I CCNGG 3 cut(s) 206, 738, 842
Mva1269I GAATGC 1 cut(s) 1071
MvaI CCWGG 3 cut(s) 206, 738, 842
MvnI CGCG 1 cut(s) 187
MwoI GCNNNNNNNGC 3 cut(s) 193, 947, 1068
NdeI CATATG 2 cut(s) 922, 1102
NdeII GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
NlaIII CATG 8 cut(s) 58, 89, 266, 290, 364, 448, 748, 1010
NlaIV GGNNCC 7 cut(s) 44, 210, 451, 1061, 1062, 1359, 1407
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 2 cut(s) 134, 386
PaeR7I CTCGAG 2 cut(s) 80, 110
PagI TCATGA 2 cut(s) 262, 1006
PceI AGGCCT 1 cut(s) 1319
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PctI GAATGC 1 cut(s) 1071
PfeI GAWTC 3 cut(s) 90, 853, 1277
PkrI GCNGC 2 cut(s) 72, 1393
PleI GAGTC 1 cut(s) 1333
PpsI GAGTC 1 cut(s) 1333
Ppu21I YACGTR 1 cut(s) 1028
Psp6I CCWGG 3 cut(s) 204, 736, 840
PspEI GGTNACC 1 cut(s) 134
PspGI CCWGG 3 cut(s) 204, 736, 840
PspN4I GGNNCC 7 cut(s) 44, 210, 451, 1061, 1062, 1359, 1407
PspOMI GGGCCC 1 cut(s) 1060
PspPI GGNCC 6 cut(s) 312, 547, 610, 1060, 1061, 1405
PspXI VCTCGAGB 1 cut(s) 80
PstI CTGCAG 1 cut(s) 897
PsuI RGATCY 1 cut(s) 1357
RsaI GTAC 3 cut(s) 743, 870, 956
RsaNI GTAC 3 cut(s) 742, 869, 955
RseI CAYNNNNRTG 2 cut(s) 291, 793
SaqAI TTAA 7 cut(s) 222, 576, 591, 779, 968, 1044, 1199
SatI GCNGC 2 cut(s) 71, 1392
Sau3AI GATC 6 cut(s) 169, 198, 283, 325, 475, 1357
Sau96I GGNCC 6 cut(s) 312, 547, 610, 1060, 1061, 1405
SchI GAGTC 1 cut(s) 1334
ScrFI CCNGG 3 cut(s) 206, 738, 842
SduI GDGCHC 1 cut(s) 1064
SfaNI GCATC 2 cut(s) 782, 785
SfcI CTRYAG 1 cut(s) 893
Sfr274I CTCGAG 2 cut(s) 80, 110
SinI GGWCC 3 cut(s) 547, 610, 1405
SlaI CTCGAG 2 cut(s) 80, 110
SmiMI CAYNNNNRTG 2 cut(s) 291, 793
SmlI CTYRAG 3 cut(s) 80, 110, 1292
SmoI CTYRAG 3 cut(s) 80, 110, 1292
SpeI ACTAGT 1 cut(s) 1151
Sse9I AATT 8 cut(s) 105, 219, 307, 636, 685, 780, 1268, 1412
SseBI AGGCCT 1 cut(s) 1319
SsiI CCGC 3 cut(s) 39, 185, 624
SspI AATATT 1 cut(s) 966
SspMI CTAG 4 cut(s) 213, 942, 1089, 1152
StuI AGGCCT 1 cut(s) 1319
StyD4I CCNGG 3 cut(s) 204, 736, 840
TaaI ACNGT 7 cut(s) 227, 392, 509, 703, 832, 868, 1402
TaiI ACGT 2 cut(s) 1030, 1371
TaqI TCGA 6 cut(s) 81, 111, 201, 247, 478, 928
TasI AATT 8 cut(s) 105, 219, 307, 636, 685, 780, 1268, 1412
TatI WGTACW 2 cut(s) 868, 954
TfiI GAWTC 3 cut(s) 90, 853, 1277
Tru1I TTAA 7 cut(s) 222, 576, 591, 779, 968, 1044, 1199
Tru9I TTAA 7 cut(s) 222, 576, 591, 779, 968, 1044, 1199
TscAI CASTG 5 cut(s) 322, 514, 871, 1132, 1407
TseFI GTSAC 2 cut(s) 134, 386
TseI GCWGC 2 cut(s) 70, 1391
Tsp45I GTSAC 2 cut(s) 134, 386
TspDTI ATGAA 5 cut(s) 279, 644, 761, 995, 1023
TspGWI ACGGA 1 cut(s) 117
TspRI CASTG 5 cut(s) 322, 514, 871, 1132, 1407
VpaK11BI GGWCC 3 cut(s) 547, 610, 1405
XapI RAATTY 3 cut(s) 105, 685, 1268
XbaI TCTAGA 1 cut(s) 1088
XcmI CCANNNNNNNNNTGG 2 cut(s) 422, 1124
XhoI CTCGAG 2 cut(s) 80, 110
XmiI GTMKAC 1 cut(s) 818
XspI CTAG 4 cut(s) 213, 942, 1089, 1152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.