CCR4-NOT transcription complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02080 AT1G02080 AT1G02080 |
| fragaria_vesca | FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 |
| malus_domestica | MD02G1214300.v1.1 MD07G1112500.v1.1 |
| prunus_persica | Prupe.2G135900_v2.0.a1 Prupe.2G135900_v2.0.a1 |
| pyrus_communis | pycom07g09730 pycom07g09740 pycom07g09780 pycom11g20140 |
| rosa_chinensis | RchiOBHm_Chr1g0348711 |
| rosa_laevigata | RLG00000028628 |
| rosa_multiflora | Rmu_sc0001674.1_g000008 |
| rosa_roxburghii | Rroxscaffold_4G00306720 |
| rosa_rugosa | Rorug01G0197100 Rorug01G0197200 Rorug01G0197300 |
| rosa_samantha | Rh1AG214400 Rh1BG181000 Rh1CG199100 Rh1DG211000 |
| rosa_wichuraiana | Rw1G018170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2924, 3164 |
| AarI | CACCTGC | 2 cut(s) | 4819, 5581 |
| Acc16I | TGCGCA | 1 cut(s) | 3012 |
| Acc36I | ACCTGC | 3 cut(s) | 1422, 4819, 5581 |
| Acc65I | GGTACC | 2 cut(s) | 3728, 5616 |
| AccB1I | GGYRCC | 3 cut(s) | 974, 3728, 5616 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 3671, 4891, 5308 |
| AccBSI | CCGCTC | 2 cut(s) | 5164, 5719 |
| AccI | GTMKAC | 1 cut(s) | 1300 |
| AccII | CGCG | 2 cut(s) | 26, 5730 |
| AclI | AACGTT | 1 cut(s) | 6199 |
| AcoI | YGGCCR | 5 cut(s) | 1231, 2363, 4426, 5241, 6172 |
| AdeI | CACNNNGTG | 2 cut(s) | 890, 2741 |
| AfeI | AGCGCT | 1 cut(s) | 3185 |
| AflII | CTTAAG | 1 cut(s) | 3247 |
| AflIII | ACRYGT | 1 cut(s) | 392 |
| AhlI | ACTAGT | 2 cut(s) | 4919, 5135 |
| AleI | CACNNNNGTG | 1 cut(s) | 1545 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 6249, 6281 |
| Alw21I | GWGCWC | 6 cut(s) | 93, 2424, 2755, 5077, 5133, 7180 |
| Alw26I | GTCTC | 8 cut(s) | 848, 2602, 4049, 5822, 6489, 6741, 7114, 7159 |
| Alw44I | GTGCAC | 1 cut(s) | 7176 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 371, 4568, 5410, 6799 |
| Ama87I | CYCGRG | 2 cut(s) | 845, 6122 |
| Aor51HI | AGCGCT | 1 cut(s) | 3185 |
| ApaLI | GTGCAC | 1 cut(s) | 7176 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 557, 589 |
| AseI | ATTAAT | 2 cut(s) | 2928, 5463 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 201, 294 |
| Asp718I | GGTACC | 2 cut(s) | 3728, 5616 |
| AspLEI | GCGC | 7 cut(s) | 3013, 3186, 3664, 3987, 6828, 6864, 7081 |
| AspS9I | GGNCC | 7 cut(s) | 2068, 4408, 4565, 6004, 6186, 6808, 7127 |
| AsuC2I | CCSGG | 1 cut(s) | 972 |
| AvaI | CYCGRG | 2 cut(s) | 845, 6122 |
| AvaII | GGWCC | 4 cut(s) | 2068, 6004, 6808, 7127 |
| AxyI | CCTNAGG | 1 cut(s) | 2530 |
| BaeGI | GKGCMC | 2 cut(s) | 5662, 7180 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 6200, 6233 |
| BalI | TGGCCA | 4 cut(s) | 1233, 4428, 5243, 6174 |
| BamHI | GGATCC | 2 cut(s) | 6019, 6433 |
| BanI | GGYRCC | 3 cut(s) | 974, 3728, 5616 |
| BanII | GRGCYC | 5 cut(s) | 93, 1086, 2424, 3256, 5133 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2147, 2179 |
| BauI | CACGAG | 4 cut(s) | 2423, 2799, 3255, 4861 |
| BbsI | GAAGAC | 5 cut(s) | 2760, 5544, 5757, 5848, 6998 |
| Bbv12I | GWGCWC | 6 cut(s) | 93, 2424, 2755, 5077, 5133, 7180 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1317, 1351, 6491, 6525 |
| BciVI | GTATCC | 4 cut(s) | 978, 1359, 2184, 7177 |
| BclI | TGATCA | 1 cut(s) | 3772 |
| BcnI | CCSGG | 1 cut(s) | 972 |
| BcoDI | GTCTC | 8 cut(s) | 848, 2602, 4049, 5822, 6489, 6741, 7114, 7159 |
| BcuI | ACTAGT | 2 cut(s) | 4919, 5135 |
| BfmI | CTRYAG | 5 cut(s) | 1952, 1968, 2199, 3996, 5402 |
| BfoI | RGCGCY | 2 cut(s) | 3187, 6829 |
| BfrI | CTTAAG | 1 cut(s) | 3247 |
| BfuAI | ACCTGC | 3 cut(s) | 1422, 4819, 5581 |
| BfuI | GTATCC | 4 cut(s) | 978, 1359, 2184, 7177 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 6180 |
| BglII | AGATCT | 2 cut(s) | 3417, 6048 |
| BmcAI | AGTACT | 2 cut(s) | 2410, 6963 |
| Bme18I | GGWCC | 4 cut(s) | 2068, 6004, 6808, 7127 |
| BmeT110I | CYCGRG | 2 cut(s) | 845, 6122 |
| BmgT120I | GGNCC | 7 cut(s) | 2068, 4408, 4565, 6004, 6186, 6808, 7127 |
| BmrI | ACTGGG | 2 cut(s) | 2511, 2580 |
| BmuI | ACTGGG | 2 cut(s) | 2511, 2580 |
| BpiI | GAAGAC | 5 cut(s) | 2760, 5544, 5757, 5848, 6998 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 293, 325, 1028, 1060 |
| BpmI | CTGGAG | 7 cut(s) | 122, 476, 2579, 2874, 3362, 4512, 4803 |
| Bpu10I | CCTNAGC | 2 cut(s) | 4160, 6290 |
| BpuEI | CTTGAG | 8 cut(s) | 1364, 1703, 3506, 3674, 3774, 4365, 6542, 7096 |
| BpuMI | CCSGG | 1 cut(s) | 972 |
| Bsa29I | ATCGAT | 1 cut(s) | 1337 |
| BsaAI | YACGTR | 2 cut(s) | 3874, 6491 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1941 |
| BsaI | GGTCTC | 2 cut(s) | 848, 7159 |
| BsaWI | WCCGGW | 3 cut(s) | 876, 5619, 6262 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 5153, 5183, 6249, 6279 |
| Bse21I | CCTNAGG | 1 cut(s) | 2530 |
| Bse3DI | GCAATG | 6 cut(s) | 587, 634, 2766, 3948, 5755, 5789 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1941 |
| BseCI | ATCGAT | 1 cut(s) | 1337 |
| BseJI | GATNNNNATC | 1 cut(s) | 1941 |
| BseMI | GCAATG | 6 cut(s) | 587, 634, 2766, 3948, 5755, 5789 |
| BseRI | GAGGAG | 8 cut(s) | 35, 1748, 1919, 2580, 2817, 3699, 5171, 5174 |
| BseSI | GKGCMC | 2 cut(s) | 5662, 7180 |
| BseYI | CCCAGC | 2 cut(s) | 4680, 6164 |
| BsgI | GTGCAG | 3 cut(s) | 2763, 4272, 5831 |
| Bsh1236I | CGCG | 2 cut(s) | 26, 5730 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1337, 6992 |
| BshNI | GGYRCC | 3 cut(s) | 974, 3728, 5616 |
| BshVI | ATCGAT | 1 cut(s) | 1337 |
| BsiEI | CGRYCG | 2 cut(s) | 1337, 6992 |
| BsiHKAI | GWGCWC | 6 cut(s) | 93, 2424, 2755, 5077, 5133, 7180 |
| BsiHKCI | CYCGRG | 2 cut(s) | 845, 6122 |
| BsiSI | CCGG | 7 cut(s) | 877, 972, 2756, 4403, 5620, 6263, 6431 |
| BslFI | GGGAC | 3 cut(s) | 250, 2499, 4420 |
| BsmAI | GTCTC | 8 cut(s) | 848, 2602, 4049, 5822, 6489, 6741, 7114, 7159 |
| BsmBI | CGTCTC | 1 cut(s) | 4049 |
| BsmFI | GGGAC | 3 cut(s) | 250, 2499, 4420 |
| BsmI | GAATGC | 3 cut(s) | 319, 5053, 6378 |
| Bso31I | GGTCTC | 2 cut(s) | 848, 7159 |
| BsoBI | CYCGRG | 2 cut(s) | 845, 6122 |
| Bsp1286I | GDGCHC | 9 cut(s) | 93, 1086, 2424, 2755, 3256, 5077, 5133, 5662, 7180 |
| Bsp1407I | TGTACA | 1 cut(s) | 4213 |
| Bsp19I | CCATGG | 4 cut(s) | 1467, 4041, 4389, 6998 |
| BspDI | ATCGAT | 1 cut(s) | 1337 |
| BspFNI | CGCG | 2 cut(s) | 26, 5730 |
| BspHI | TCATGA | 2 cut(s) | 1009, 6313 |
| BspMAI | CTGCAG | 2 cut(s) | 1956, 2203 |
| BspMI | ACCTGC | 3 cut(s) | 1422, 4819, 5581 |
| BspQI | GCTCTTC | 2 cut(s) | 1581, 3174 |
| BspT107I | GGYRCC | 3 cut(s) | 974, 3728, 5616 |
| BspTI | CTTAAG | 1 cut(s) | 3247 |
| BspTNI | GGTCTC | 2 cut(s) | 848, 7159 |
| BsrBI | CCGCTC | 2 cut(s) | 5164, 5719 |
| BsrDI | GCAATG | 6 cut(s) | 587, 634, 2766, 3948, 5755, 5789 |
| BsrGI | TGTACA | 1 cut(s) | 4213 |
| BssSI | CACGAG | 4 cut(s) | 2423, 2799, 3255, 4861 |
| BssT1I | CCWWGG | 9 cut(s) | 1467, 1946, 3002, 4041, 4389, 5007, 6007, 6633, 6998 |
| Bst2BI | CACGAG | 4 cut(s) | 2423, 2799, 3255, 4861 |
| Bst6I | CTCTTC | 7 cut(s) | 463, 1581, 2145, 3174, 3522, 3717, 4328 |
| BstAFI | CTTAAG | 1 cut(s) | 3247 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 1262, 2750, 5648, 5657, 6077, 6607 |
| BstAUI | TGTACA | 1 cut(s) | 4213 |
| BstBAI | YACGTR | 2 cut(s) | 3874, 6491 |
| BstDSI | CCRYGG | 4 cut(s) | 1467, 4041, 4389, 6998 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2799 |
| BstFNI | CGCG | 2 cut(s) | 26, 5730 |
| BstH2I | RGCGCY | 2 cut(s) | 3187, 6829 |
| BstHHI | GCGC | 7 cut(s) | 3013, 3186, 3664, 3987, 6828, 6864, 7081 |
| BstMAI | GTCTC | 8 cut(s) | 848, 2602, 4049, 5822, 6489, 6741, 7114, 7159 |
| BstMCI | CGRYCG | 2 cut(s) | 1337, 6992 |
| BstNSI | RCATGY | 9 cut(s) | 396, 521, 913, 1073, 1157, 1256, 4125, 4211, 4511 |
| BstSFI | CTRYAG | 5 cut(s) | 1952, 1968, 2199, 3996, 5402 |
| BstSLI | GKGCMC | 2 cut(s) | 5662, 7180 |
| BstUI | CGCG | 2 cut(s) | 26, 5730 |
| BstV2I | GAAGAC | 5 cut(s) | 2760, 5544, 5757, 5848, 6998 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 650, 1808, 3384 |
| Bsu15I | ATCGAT | 1 cut(s) | 1337 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2530 |
| BsuI | GTATCC | 4 cut(s) | 978, 1359, 2184, 7177 |
| BsuTUI | ATCGAT | 1 cut(s) | 1337 |
| BtgI | CCRYGG | 4 cut(s) | 1467, 4041, 4389, 6998 |
| BtgZI | GCGATG | 2 cut(s) | 464, 2727 |
| BtsI | GCAGTG | 3 cut(s) | 1480, 1836, 3994 |
| BveI | ACCTGC | 3 cut(s) | 1422, 4819, 5581 |
| CaiI | CAGNNNCTG | 4 cut(s) | 371, 4568, 5410, 6799 |
| CciI | TCATGA | 2 cut(s) | 1009, 6313 |
| CfoI | GCGC | 7 cut(s) | 3013, 3186, 3664, 3987, 6828, 6864, 7081 |
| Cfr13I | GGNCC | 7 cut(s) | 2068, 4408, 4565, 6004, 6186, 6808, 7127 |
| ClaI | ATCGAT | 1 cut(s) | 1337 |
| CseI | GACGC | 2 cut(s) | 4814, 5719 |
| CsiI | ACCWGGT | 1 cut(s) | 3724 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 7119, 7154 |
| DraI | TTTAAA | 2 cut(s) | 220, 4029 |
| DraIII | CACNNNGTG | 2 cut(s) | 890, 2741 |
| EaeI | YGGCCR | 5 cut(s) | 1231, 2363, 4426, 5241, 6172 |
| Eam1104I | CTCTTC | 7 cut(s) | 463, 1581, 2145, 3174, 3522, 3717, 4328 |
| EarI | CTCTTC | 7 cut(s) | 463, 1581, 2145, 3174, 3522, 3717, 4328 |
| Ecl136II | GAGCTC | 3 cut(s) | 91, 2422, 5131 |
| Eco130I | CCWWGG | 9 cut(s) | 1467, 1946, 3002, 4041, 4389, 5007, 6007, 6633, 6998 |
| Eco24I | GRGCYC | 5 cut(s) | 93, 1086, 2424, 3256, 5133 |
| Eco31I | GGTCTC | 2 cut(s) | 848, 7159 |
| Eco32I | GATATC | 3 cut(s) | 1579, 2916, 5839 |
| Eco47I | GGWCC | 4 cut(s) | 2068, 6004, 6808, 7127 |
| Eco47III | AGCGCT | 1 cut(s) | 3185 |
| Eco53kI | GAGCTC | 3 cut(s) | 91, 2422, 5131 |
| Eco81I | CCTNAGG | 1 cut(s) | 2530 |
| Eco88I | CYCGRG | 2 cut(s) | 845, 6122 |
| EcoICRI | GAGCTC | 3 cut(s) | 91, 2422, 5131 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2799 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4408, 4565 |
| EcoRI | GAATTC | 2 cut(s) | 294, 4165 |
| EcoRV | GATATC | 3 cut(s) | 1579, 2916, 5839 |
| EcoT14I | CCWWGG | 9 cut(s) | 1467, 1946, 3002, 4041, 4389, 5007, 6007, 6633, 6998 |
| EcoT22I | ATGCAT | 5 cut(s) | 319, 2284, 4873, 5053, 6073 |
| EcoT38I | GRGCYC | 5 cut(s) | 93, 1086, 2424, 3256, 5133 |
| ErhI | CCWWGG | 9 cut(s) | 1467, 1946, 3002, 4041, 4389, 5007, 6007, 6633, 6998 |
| Esp3I | CGTCTC | 1 cut(s) | 4049 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1362, 1394, 6273, 6305 |
| FaqI | GGGAC | 3 cut(s) | 250, 2499, 4420 |
| FauI | CCCGC | 1 cut(s) | 1515 |
| FauNDI | CATATG | 2 cut(s) | 3292, 5238 |
| FbaI | TGATCA | 1 cut(s) | 3772 |
| FblI | GTMKAC | 1 cut(s) | 1300 |
| FriOI | GRGCYC | 5 cut(s) | 93, 1086, 2424, 3256, 5133 |
| FspI | TGCGCA | 1 cut(s) | 3012 |
| GlaI | GCGC | 7 cut(s) | 3012, 3185, 3663, 3986, 6827, 6863, 7080 |
| GsaI | CCCAGC | 2 cut(s) | 4684, 6168 |
| GsuI | CTGGAG | 7 cut(s) | 122, 476, 2579, 2874, 3362, 4512, 4803 |
| HaeII | RGCGCY | 2 cut(s) | 3187, 6829 |
| HapII | CCGG | 7 cut(s) | 877, 972, 2756, 4403, 5620, 6263, 6431 |
| HgaI | GACGC | 2 cut(s) | 4814, 5719 |
| HhaI | GCGC | 7 cut(s) | 3013, 3186, 3664, 3987, 6828, 6864, 7081 |
| Hin6I | GCGC | 7 cut(s) | 3011, 3184, 3662, 3985, 6826, 6862, 7079 |
| HinP1I | GCGC | 7 cut(s) | 3011, 3184, 3662, 3985, 6826, 6862, 7079 |
| HincII | GTYRAC | 2 cut(s) | 2052, 5992 |
| HindII | GTYRAC | 2 cut(s) | 2052, 5992 |
| HindIII | AAGCTT | 5 cut(s) | 1238, 2523, 3221, 3749, 5114 |
| HpaI | GTTAAC | 1 cut(s) | 5992 |
| HpaII | CCGG | 7 cut(s) | 877, 972, 2756, 4403, 5620, 6263, 6431 |
| HpyCH4IV | ACGT | 5 cut(s) | 3873, 6199, 6490, 6654, 6973 |
| HpySE526I | ACGT | 5 cut(s) | 3873, 6199, 6490, 6654, 6973 |
| HspAI | GCGC | 7 cut(s) | 3011, 3184, 3662, 3985, 6826, 6862, 7079 |
| KpnI | GGTACC | 2 cut(s) | 3732, 5620 |
| Ksp22I | TGATCA | 1 cut(s) | 3772 |
| KspAI | GTTAAC | 1 cut(s) | 5992 |
| LguI | GCTCTTC | 2 cut(s) | 1581, 3174 |
| MabI | ACCWGGT | 1 cut(s) | 3724 |
| MaeII | ACGT | 5 cut(s) | 3873, 6199, 6490, 6654, 6973 |
| MbiI | CCGCTC | 2 cut(s) | 5164, 5719 |
| MfeI | CAATTG | 3 cut(s) | 2055, 3228, 4293 |
| MhlI | GDGCHC | 9 cut(s) | 93, 1086, 2424, 2755, 3256, 5077, 5133, 5662, 7180 |
| MlsI | TGGCCA | 4 cut(s) | 1233, 4428, 5243, 6174 |
| MluNI | TGGCCA | 4 cut(s) | 1233, 4428, 5243, 6174 |
| MmeI | TCCRAC | 8 cut(s) | 1825, 2626, 3556, 4884, 5079, 5449, 6220, 6948 |
| Mox20I | TGGCCA | 4 cut(s) | 1233, 4428, 5243, 6174 |
| Mph1103I | ATGCAT | 5 cut(s) | 319, 2284, 4873, 5053, 6073 |
| MroXI | GAANNNNTTC | 2 cut(s) | 201, 294 |
| MscI | TGGCCA | 4 cut(s) | 1233, 4428, 5243, 6174 |
| Msp20I | TGGCCA | 4 cut(s) | 1233, 4428, 5243, 6174 |
| MspA1I | CMGCKG | 5 cut(s) | 496, 556, 1207, 4600, 5410 |
| MspCI | CTTAAG | 1 cut(s) | 3247 |
| MspI | CCGG | 7 cut(s) | 877, 972, 2756, 4403, 5620, 6263, 6431 |
| MunI | CAATTG | 3 cut(s) | 2055, 3228, 4293 |
| Mva1269I | GAATGC | 3 cut(s) | 319, 5053, 6378 |
| MvnI | CGCG | 2 cut(s) | 26, 5730 |
| NciI | CCSGG | 1 cut(s) | 972 |
| NcoI | CCATGG | 4 cut(s) | 1467, 4041, 4389, 6998 |
| NdeI | CATATG | 2 cut(s) | 3292, 5238 |
| NmeAIII | GCCGAG | 1 cut(s) | 5635 |
| NmuCI | GTSAC | 5 cut(s) | 890, 2733, 4117, 5397, 5911 |
| NsbI | TGCGCA | 1 cut(s) | 3012 |
| NsiI | ATGCAT | 5 cut(s) | 319, 2284, 4873, 5053, 6073 |
| NspI | RCATGY | 9 cut(s) | 396, 521, 913, 1073, 1157, 1256, 4125, 4211, 4511 |
| OliI | CACNNNNGTG | 1 cut(s) | 1545 |
| PaeR7I | CTCGAG | 2 cut(s) | 845, 6122 |
| PagI | TCATGA | 2 cut(s) | 1009, 6313 |
| PaqCI | CACCTGC | 2 cut(s) | 4819, 5581 |
| PciI | ACATGT | 1 cut(s) | 392 |
| PciSI | GCTCTTC | 2 cut(s) | 1581, 3174 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 843, 2797, 3870 |
| PctI | GAATGC | 3 cut(s) | 319, 5053, 6378 |
| PdmI | GAANNNNTTC | 2 cut(s) | 201, 294 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 3671, 4891, 5308 |
| PfoI | TCCNGGA | 1 cut(s) | 6942 |
| Ple19I | CGATCG | 1 cut(s) | 1337 |
| Ppu21I | YACGTR | 2 cut(s) | 3874, 6491 |
| PscI | ACATGT | 1 cut(s) | 392 |
| PshBI | ATTAAT | 2 cut(s) | 2928, 5463 |
| PsiI | TTATAA | 2 cut(s) | 2924, 3164 |
| Psp124BI | GAGCTC | 3 cut(s) | 93, 2424, 5133 |
| Psp1406I | AACGTT | 1 cut(s) | 6199 |
| PspFI | CCCAGC | 2 cut(s) | 4680, 6164 |
| PspPI | GGNCC | 7 cut(s) | 2068, 4408, 4565, 6004, 6186, 6808, 7127 |
| PspXI | VCTCGAGB | 1 cut(s) | 6122 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 4197, 4229, 7028, 7060 |
| PstI | CTGCAG | 2 cut(s) | 1956, 2203 |
| PstNI | CAGNNNCTG | 4 cut(s) | 371, 4568, 5410, 6799 |
| PvuI | CGATCG | 1 cut(s) | 1337 |
| PvuII | CAGCTG | 3 cut(s) | 556, 1207, 5410 |
| SacI | GAGCTC | 3 cut(s) | 93, 2424, 5133 |
| SapI | GCTCTTC | 2 cut(s) | 1581, 3174 |
| Sau96I | GGNCC | 7 cut(s) | 2068, 4408, 4565, 6004, 6186, 6808, 7127 |
| ScaI | AGTACT | 2 cut(s) | 2410, 6963 |
| SduI | GDGCHC | 9 cut(s) | 93, 1086, 2424, 2755, 3256, 5077, 5133, 5662, 7180 |
| SexAI | ACCWGGT | 1 cut(s) | 3724 |
| SfcI | CTRYAG | 5 cut(s) | 1952, 1968, 2199, 3996, 5402 |
| Sfr274I | CTCGAG | 2 cut(s) | 845, 6122 |
| SinI | GGWCC | 4 cut(s) | 2068, 6004, 6808, 7127 |
| SlaI | CTCGAG | 2 cut(s) | 845, 6122 |
| SpeI | ACTAGT | 2 cut(s) | 4919, 5135 |
| SspI | AATATT | 5 cut(s) | 934, 1572, 2935, 4065, 4186 |
| SstI | GAGCTC | 3 cut(s) | 93, 2424, 5133 |
| StyI | CCWWGG | 9 cut(s) | 1467, 1946, 3002, 4041, 4389, 5007, 6007, 6633, 6998 |
| TaiI | ACGT | 5 cut(s) | 3876, 6202, 6493, 6657, 6976 |
| TatI | WGTACW | 8 cut(s) | 79, 830, 1291, 2154, 2408, 4213, 5226, 6961 |
| TauI | GCSGC | 3 cut(s) | 1652, 2368, 7125 |
| TseFI | GTSAC | 5 cut(s) | 890, 2733, 4117, 5397, 5911 |
| Tsp45I | GTSAC | 5 cut(s) | 890, 2733, 4117, 5397, 5911 |
| TspGWI | ACGGA | 3 cut(s) | 183, 1597, 5573 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 3671, 4891, 5308 |
| Vha464I | CTTAAG | 1 cut(s) | 3247 |
| VneI | GTGCAC | 1 cut(s) | 7176 |
| VpaK11BI | GGWCC | 4 cut(s) | 2068, 6004, 6808, 7127 |
| VspI | ATTAAT | 2 cut(s) | 2928, 5463 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2799 |
| XbaI | TCTAGA | 4 cut(s) | 298, 4201, 5495, 6716 |
| XceI | RCATGY | 9 cut(s) | 396, 521, 913, 1073, 1157, 1256, 4125, 4211, 4511 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 500, 1103, 3381, 3893 |
| XhoI | CTCGAG | 2 cut(s) | 845, 6122 |
| XmiI | GTMKAC | 1 cut(s) | 1300 |
| XmnI | GAANNNNTTC | 2 cut(s) | 201, 294 |
| ZrmI | AGTACT | 2 cut(s) | 2410, 6963 |
| Zsp2I | ATGCAT | 5 cut(s) | 319, 2284, 4873, 5053, 6073 |