Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0005282

Physical Location & Seq

Genomic Coordinates Forward (+)

9118024 .. 9124408

Gene Structure 6385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g09740.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2850 bp

ATGTATACACAAGGAGGCAGTGTGCCCGAGTCCCTTCGCCCAAAACCTGGTCATTTGTCCATTTCTCAACAACGAGTTTATGAGGACTTTGTGCGGCTTCCCTGGCAAAACCAGTCTAGCCAGAATTCGCATGTTCTTCCTGCTAGTACTGCAGCTACATCTGCAAGTACAGGTCTAAATAGCACATTTGGTTCAGCCTCGGCTCAAATTAACACAGGCTTCTCAGCAGGCCCCGGAAGCAAATTTGATGCAGTTTCTCGTCCACTGGATGAGGCGATTGAATCCAATCCGGCTCTGCATCCAAGTGCATCCTCTATTAATGTTGGAGCGGGTGATGGTGTTTCCCAGCATGGTTCTGAGAATGATTCTGTCATTGGTTCATTTCCTCCTGCTGCTTCTGCCCTAGAGCTGCAATCAGTAGAGTCATCTGATACTATACAGGAGTCTGGAACTTCTTCACAGCCACAACCGTCACCTACTGTAACTGAACGTCTGGCAAGCAACATATCAGAACCTTCTCTCAATACGAGGGATGCAGTGGATAAATACCAGATTGTTTCACAGAAGCTTGAAGCTTTGGTAACCAACGATGCTAGAGAGTTAGAAATTCAGGGAGTAATTGGTGAAGTTCCTGAGATTATACTCAGGTGTGTTAGTCGAGATGAGGCTGCCTTGGCTGTGGCTCAAAAGGTTTTCAAGGGTTTATACGAAAATGCATCGAACCATACTCATGTCAGTGCTCATATTGCAATGCTGACAGCTATTCGCGATGTTTGCAAGCTTGTTGTTAAGGAGCTCACTAGTTGGGTTATTTATTCGGATGAGGAGCGGAAGTTTAACAAGGATATTACTGTTGGCCTCATTCACAGTGAATTGCTAAATCTTGCAGAGTACAATGTTCAAATGGCAAAACTTATTGATGGGGGCAGAAATAAGCCTGCAACTGAGTTTTCAATTTCCCTTCTCCAATCTTTGGTGATTGAAGAATCTAAAGTTATATCAGAACTTCATAATCTTGTTGACGCATTGGCAAAGCTCGCTGCAAAGCCTGGATCTCCTGAGTCGCTACAGCAGCTGGTTGAAATGGTAAAGAATCCTGCTTATATTCTTGGTGCGCCGTCTGCTATTAATGTAGGAAAAGAGGACAAAGCCAGAATATCTAAAGATAAAAAGGCTTCTGTTCACTCTCCGGTGAGCAGGGAAGACTTTAGTAATGTGGAGTCTGTTGAACCAGATCCTGCTGGATTCCGTGAGCAGGTGTCTATGCTGTTTGCAGAGTGGTACCGGATTTGCGAACTTCCTGGTGCAAACGATGCAGCTTGTGCCCATTTTATCTTGCAGTTGCATCAAAATGGTCTGCTGAAGGGGGATGATATGACAGACCGGTTTTTCCGTGTCCTCACAGAGCTATCTGTTGCACATTGCCTATCTTCTGAGATGACAATTCCAAGCTCACTGCAAACGCCTCAACAAGTGCAGAATCTCTCCTTCCTTGCTATTGATATTTATGCTAAACTTGTCTTCTTAATTTTGAAGGGATCAAGTAAACTATTTCTCTTGTCTAAGATATTGTTAGTCACAGTGAGATTCATTCAAAAGGATGCAGAGGAGAAGAAAACATCTTTCAATCCAAGACCGTATTTTAGATTGTTTGTCAACTGGCTTCTAGACCTTGGTTCTTTGGATCCTGTGATTGATGGTGCTAACTTTCAGATATTGACAGCATTTGCAAATGCATTTCATGCTTTGCAGCCCCTTAAGGTTCCTACGTTCAGCTTTGCATGGCTTGAGTTGGTGAGTCATAGGAGTTTCATGCCAAAAATGCTTGTTGGAAATGGTCAGAAGGGTTGGCCCTATGTCCAACGTTTGCTGGTACATTTGTTTCAATTTATGGAGCCATTTTTGAGGAATGCTGAACTTGGAGTTCCGGTTCATTTCATGTATAAAGGCACACTCAGGGTGCTTCTAGTGCTACTTCATGATTTTCCGGAGTTCCTTTGTGATTATCATTTTACTTTCTGTGATGTAATCCCTCCAAGCTGCATTCAAATGCGAAATATCATCCTCAGTGCATTTCCCCGTAATATGAGGCTACCAGATCCATCTACTCCCAACTTAAAGATTGATTTGCTTGCAGAAATCAGTCAGTCTCCACGTATTCTTTCCGAGGTTGATGCAGCTTTAAAAGCGAAGCAGATGAAAGCTGATGTGGATGAGTATCTCAAGACAAGGCAACAGGGTTCTTCATTTCTGACTGAACTGAAGCAAAAGTTGCTCCTTTTACCAAGCGAAGCTGCCTCAGCTGGTACTCGTTACAATGTACCCCTGATCAACTCCCTTGTGCTTTATGTTGGGATGCAGGCTATCCAGCAGCTTCAGGCTAGAACACCTCATGCGCAATCTACCCAAACTGTTCCATTGACTGTCTATTTGGTGGGTGCTGCTTTGGATATTTTTCAGACTCTGATAGTGGACCTAGATACTGAAGGGCGCTACCTTTTCCTAAATGCGATCGCAAACCAACTGCGTTATCCAAACACCCATACCCATTACTTTTCTTTCATTGTTTTGTACTTGTTTGCTGAATCAAACCAGCATGAAATTATCCAGGAGCAAATCACAAGGGTATTGTTGGAACGTCTGATTGTCAACCGGCCTCATCCATGGGGTCTTCTAATTACCTTCATCGAGCTTATCAAGAATCCGAGATACCAGTTCTGGAACCGAGCTTTCATCAGATGTGCGCCAGAGATTGAAAAACTCTTTGAATCTGTCTCAAGGTCTTGCGGGGGACCAAAACCAGTGGACGAAAGTATGGTCTCAGGTTGGGTATCGGAGAGCGCCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

CNOT1_CAF1_bind CNOT1_HEAT CNOT1_TTP_bind DUF3819 Not1

Protein Analysis

950

Amino Acids

105.32

Weight (kDa)

5.96

Isoelectric Point (pI)

43.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005282)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02080 AT1G02080 AT1G02080
fragaria_vesca	FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770
malus_domestica	MD02G1214300.v1.1 MD07G1112500.v1.1
prunus_persica	Prupe.2G135900_v2.0.a1 Prupe.2G135900_v2.0.a1
pyrus_communis	pycom07g09730 pycom07g09740 pycom07g09780 pycom11g20140
rosa_chinensis	RchiOBHm_Chr1g0348711
rosa_laevigata	RLG00000028628
rosa_multiflora	Rmu_sc0001674.1_g000008
rosa_roxburghii	Rroxscaffold_4G00306720
rosa_rugosa	Rorug01G0197100 Rorug01G0197200 Rorug01G0197300
rosa_samantha	Rh1AG214400 Rh1BG181000 Rh1CG199100 Rh1DG211000
rosa_wichuraiana	Rw1G018170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1246
Acc16I	TGCGCA	1 cut(s)	2397
Acc36I	ACCTGC	1 cut(s)	1246
Acc65I	GGTACC	1 cut(s)	1281
AccB1I	GGYRCC	1 cut(s)	1281
AccB7I	CCANNNNNTGG	2 cut(s)	47, 973
AccBSI	CCGCTC	2 cut(s)	329, 829
AccI	GTMKAC	1 cut(s)	5
AccII	CGCG	1 cut(s)	768
AccIII	TCCGGA	1 cut(s)	1987
AciI	CCGC	4 cut(s)	94, 329, 829, 2787
AclI	AACGTT	1 cut(s)	1864
AclWI	GGATC	6 cut(s)	1060, 1229, 1546, 1679, 1692, 2093
AcsI	RAATTY	3 cut(s)	124, 242, 606
AcuI	CTGAAG	4 cut(s)	1382, 2282, 2360, 2505
AfaI	GTAC	8 cut(s)	148, 169, 893, 1283, 1875, 2308, 2322, 2573
AfiI	CCNNNNNNNGG	3 cut(s)	47, 973, 1255
AflII	CTTAAG	1 cut(s)	1757
AgeI	ACCGGT	1 cut(s)	1383
AhlI	ACTAGT	1 cut(s)	800
AjnI	CCWGG	5 cut(s)	46, 101, 1048, 1300, 2607
AloI	GAACNNNNNNTCC	2 cut(s)	1914, 1946
Alw21I	GWGCWC	2 cut(s)	742, 798
Alw26I	GTCTC	3 cut(s)	2154, 2779, 2824
AlwI	GGATC	6 cut(s)	1060, 1229, 1546, 1679, 1692, 2093
AlwNI	CAGNNNCTG	3 cut(s)	1075, 1238, 2464
Ama87I	CYCGRG	1 cut(s)	26
Aor13HI	TCCGGA	1 cut(s)	1987
AoxI	GGCC	4 cut(s)	229, 856, 1850, 2654
ApoI	RAATTY	3 cut(s)	124, 242, 606
ArsI	GACNNNNNNTTYG	4 cut(s)	2413, 2445, 2802, 2834
AseI	ATTAAT	2 cut(s)	318, 1128
AsiGI	ACCGGT	1 cut(s)	1383
AsiSI	GCGATCGC	1 cut(s)	2514
Asp700I	GAANNNNTTC	1 cut(s)	454
Asp718I	GGTACC	1 cut(s)	1281
AspLEI	GCGC	5 cut(s)	1117, 2398, 2493, 2746, 2843
AspS9I	GGNCC	4 cut(s)	230, 1851, 2473, 2792
AsuC2I	CCSGG	1 cut(s)	234
AsuHPI	GGTGA	6 cut(s)	344, 465, 635, 988, 1204, 1807
AvaI	CYCGRG	1 cut(s)	26
AvaII	GGWCC	2 cut(s)	2473, 2792
BaeGI	GKGCMC	2 cut(s)	27, 1327
BaeI	ACNNNNGTAYC	2 cut(s)	1865, 1898
BamHI	GGATCC	1 cut(s)	1684
BanI	GGYRCC	1 cut(s)	1281
BanII	GRGCYC	1 cut(s)	798
BbsI	GAAGAC	3 cut(s)	1209, 1513, 2663
Bbv12I	GWGCWC	2 cut(s)	742, 798
BbvCI	CCTCAGC	1 cut(s)	2299
BccI	CCATC	4 cut(s)	329, 914, 1691, 2110
BceAI	ACGGC	1 cut(s)	1102
BcgI	CGANNNNNNTGC	2 cut(s)	2156, 2190
BciT130I	CCWGG	5 cut(s)	48, 103, 1050, 1302, 2609
BclI	TGATCA	1 cut(s)	2328
BcnI	CCSGG	1 cut(s)	234
BcoDI	GTCTC	3 cut(s)	2154, 2779, 2824
BcuI	ACTAGT	1 cut(s)	800
BfaI	CTAG	9 cut(s)	117, 144, 404, 594, 801, 1667, 1967, 2382, 2477
BfmI	CTRYAG	2 cut(s)	150, 1067
BfoI	RGCGCY	2 cut(s)	2494, 2844
BfrI	CTTAAG	1 cut(s)	1757
BfuAI	ACCTGC	1 cut(s)	1246
BmcAI	AGTACT	1 cut(s)	148
Bme1390I	CCNGG	6 cut(s)	48, 103, 234, 1050, 1302, 2609
Bme18I	GGWCC	2 cut(s)	2473, 2792
BmeT110I	CYCGRG	1 cut(s)	26
BmgT120I	GGNCC	4 cut(s)	230, 1851, 2473, 2792
BmiI	GGNNCC	7 cut(s)	232, 1283, 1686, 1764, 1896, 2723, 2793
BmrFI	CCNGG	6 cut(s)	48, 103, 234, 1050, 1302, 2609
BpiI	GAAGAC	3 cut(s)	1209, 1513, 2663
Bpu10I	CCTNAGC	1 cut(s)	2299
BpuEI	CTTGAG	3 cut(s)	1808, 2207, 2761
BpuMI	CCSGG	1 cut(s)	234
BsaAI	YACGTR	1 cut(s)	2156
BsaBI	GATNNNNATC	1 cut(s)	2217
BsaI	GGTCTC	1 cut(s)	2824
BsaJI	CCNNGG	7 cut(s)	101, 198, 232, 672, 1672, 2166, 2663
BsaWI	WCCGGW	5 cut(s)	1189, 1284, 1383, 1927, 1987
BsaXI	ACNNNNNCTCC	6 cut(s)	6, 36, 818, 848, 1914, 1944
Bsc4I	CCNNNNNNNGG	3 cut(s)	47, 973, 1255
Bse118I	RCCGGY	2 cut(s)	1383, 2652
Bse1I	ACTGG	5 cut(s)	112, 270, 1664, 2713, 2801
Bse3DI	GCAATG	2 cut(s)	756, 1420
Bse8I	GATNNNNATC	1 cut(s)	2217
BseAI	TCCGGA	1 cut(s)	1987
BseBI	CCWGG	5 cut(s)	48, 103, 1050, 1302, 2609
BseDI	CCNNGG	7 cut(s)	101, 198, 232, 672, 1672, 2166, 2663
BseJI	GATNNNNATC	1 cut(s)	2217
BseLI	CCNNNNNNNGG	3 cut(s)	47, 973, 1255
BseMI	GCAATG	2 cut(s)	756, 1420
BseNI	ACTGG	5 cut(s)	112, 270, 1664, 2713, 2801
BseRI	GAGGAG	2 cut(s)	839, 1622
BseSI	GKGCMC	2 cut(s)	27, 1327
BseYI	CCCAGC	1 cut(s)	345
BsgI	GTGCAG	1 cut(s)	1496
Bsh1236I	CGCG	1 cut(s)	768
Bsh1285I	CGRYCG	1 cut(s)	2514
BshFI	GGCC	4 cut(s)	231, 858, 1852, 2656
BshNI	GGYRCC	1 cut(s)	1281
BshTI	ACCGGT	1 cut(s)	1383
BsiEI	CGRYCG	1 cut(s)	2514
BsiHKAI	GWGCWC	2 cut(s)	742, 798
BsiHKCI	CYCGRG	1 cut(s)	26
BsiSI	CCGG	8 cut(s)	234, 290, 1190, 1285, 1384, 1928, 1988, 2653
BslFI	GGGAC	2 cut(s)	16, 2805
BslI	CCNNNNNNNGG	3 cut(s)	47, 973, 1255
BsmAI	GTCTC	3 cut(s)	2154, 2779, 2824
BsmFI	GGGAC	2 cut(s)	16, 2805
BsmI	GAATGC	2 cut(s)	1915, 2043
BsnI	GGCC	4 cut(s)	231, 858, 1852, 2656
Bso31I	GGTCTC	1 cut(s)	2824
BsoBI	CYCGRG	1 cut(s)	26
Bsp1286I	GDGCHC	4 cut(s)	27, 742, 798, 1327
Bsp13I	TCCGGA	1 cut(s)	1987
Bsp143I	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
Bsp19I	CCATGG	1 cut(s)	2663
Bsp68I	TCGCGA	1 cut(s)	768
BspACI	CCGC	4 cut(s)	94, 329, 829, 2787
BspANI	GGCC	4 cut(s)	231, 858, 1852, 2656
BspEI	TCCGGA	1 cut(s)	1987
BspFNI	CGCG	1 cut(s)	768
BspHI	TCATGA	1 cut(s)	1978
BspLI	GGNNCC	7 cut(s)	232, 1283, 1686, 1764, 1896, 2723, 2793
BspMAI	CTGCAG	1 cut(s)	154
BspMI	ACCTGC	1 cut(s)	1246
BspPI	GGATC	6 cut(s)	1060, 1229, 1546, 1679, 1692, 2093
BspT107I	GGYRCC	1 cut(s)	1281
BspTI	CTTAAG	1 cut(s)	1757
BspTNI	GGTCTC	1 cut(s)	2824
BsrBI	CCGCTC	2 cut(s)	329, 829
BsrDI	GCAATG	2 cut(s)	756, 1420
BsrFI	RCCGGY	2 cut(s)	1383, 2652
BsrI	ACTGG	5 cut(s)	112, 270, 1664, 2713, 2801
BssAI	RCCGGY	2 cut(s)	1383, 2652
BssECI	CCNNGG	7 cut(s)	101, 198, 232, 672, 1672, 2166, 2663
BssMI	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
BssNAI	GTATAC	1 cut(s)	6
BssT1I	CCWWGG	3 cut(s)	672, 1672, 2663
Bst1107I	GTATAC	1 cut(s)	6
Bst2UI	CCWGG	5 cut(s)	48, 103, 1050, 1302, 2609
Bst4CI	ACNGT	8 cut(s)	471, 481, 853, 869, 1582, 1638, 2413, 2425
BstAFI	CTTAAG	1 cut(s)	1757
BstAPI	GCANNNNNTGC	4 cut(s)	1313, 1322, 1742, 2272
BstBAI	YACGTR	1 cut(s)	2156
BstC8I	GCNNGC	7 cut(s)	229, 499, 779, 939, 1038, 2133, 2361
BstDSI	CCRYGG	1 cut(s)	2663
BstEII	GGTNACC	1 cut(s)	580
BstFNI	CGCG	1 cut(s)	768
BstH2I	RGCGCY	2 cut(s)	2494, 2844
BstHHI	GCGC	5 cut(s)	1117, 2398, 2493, 2746, 2843
BstKTI	GATC	7 cut(s)	1055, 1237, 1541, 1687, 2101, 2331, 2514
BstMAI	GTCTC	3 cut(s)	2154, 2779, 2824
BstMBI	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
BstMCI	CGRYCG	1 cut(s)	2514
BstNI	CCWGG	5 cut(s)	48, 103, 1050, 1302, 2609
BstNSI	RCATGY	1 cut(s)	134
BstPI	GGTNACC	1 cut(s)	580
BstSCI	CCNGG	6 cut(s)	46, 101, 232, 1048, 1300, 2607
BstSFI	CTRYAG	2 cut(s)	150, 1067
BstSLI	GKGCMC	2 cut(s)	27, 1327
BstUI	CGCG	1 cut(s)	768
BstV2I	GAAGAC	3 cut(s)	1209, 1513, 2663
BstX2I	RGATCY	4 cut(s)	1052, 1234, 1684, 2098
BstYI	RGATCY	4 cut(s)	1052, 1234, 1684, 2098
BstZ17I	GTATAC	1 cut(s)	6
BsuRI	GGCC	4 cut(s)	231, 858, 1852, 2656
BtgI	CCRYGG	1 cut(s)	2663
BtgZI	GCGATG	1 cut(s)	783
BtsI	GCAGTG	3 cut(s)	25, 543, 1454
BtsIMutI	CAGTG	9 cut(s)	25, 263, 543, 742, 874, 1454, 1587, 2074, 2808
BtuMI	TCGCGA	1 cut(s)	768
BveI	ACCTGC	1 cut(s)	1246
Cac8I	GCNNGC	7 cut(s)	229, 499, 779, 939, 1038, 2133, 2361
CaiI	CAGNNNCTG	3 cut(s)	1075, 1238, 2464
CciI	TCATGA	1 cut(s)	1978
CfoI	GCGC	5 cut(s)	1117, 2398, 2493, 2746, 2843
Cfr10I	RCCGGY	2 cut(s)	1383, 2652
Cfr13I	GGNCC	4 cut(s)	230, 1851, 2473, 2792
CseI	GACGC	1 cut(s)	1031
CsiI	ACCWGGT	1 cut(s)	46
Csp6I	GTAC	8 cut(s)	147, 168, 892, 1282, 1874, 2307, 2321, 2572
CspAI	ACCGGT	1 cut(s)	1383
CspCI	CAANNNNNGTGG	2 cut(s)	2784, 2819
CviQI	GTAC	8 cut(s)	147, 168, 892, 1282, 1874, 2307, 2321, 2572
DpnI	GATC	7 cut(s)	1054, 1236, 1540, 1686, 2100, 2330, 2513
DpnII	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
DraI	TTTAAA	1 cut(s)	2184
Ecl136II	GAGCTC	1 cut(s)	796
Eco130I	CCWWGG	3 cut(s)	672, 1672, 2663
Eco24I	GRGCYC	1 cut(s)	798
Eco31I	GGTCTC	1 cut(s)	2824
Eco47I	GGWCC	2 cut(s)	2473, 2792
Eco53kI	GAGCTC	1 cut(s)	796
Eco57I	CTGAAG	4 cut(s)	1382, 2282, 2360, 2505
Eco88I	CYCGRG	1 cut(s)	26
Eco91I	GGTNACC	1 cut(s)	580
EcoICRI	GAGCTC	1 cut(s)	796
EcoO109I	RGGNCCY	1 cut(s)	230
EcoO65I	GGTNACC	1 cut(s)	580
EcoRI	GAATTC	1 cut(s)	124
EcoRII	CCWGG	5 cut(s)	46, 101, 1048, 1300, 2607
EcoT14I	CCWWGG	3 cut(s)	672, 1672, 2663
EcoT22I	ATGCAT	2 cut(s)	718, 1738
EcoT38I	GRGCYC	1 cut(s)	798
ErhI	CCWWGG	3 cut(s)	672, 1672, 2663
FaqI	GGGAC	2 cut(s)	16, 2805
FauI	CCCGC	2 cut(s)	322, 2780
FbaI	TGATCA	1 cut(s)	2328
FblI	GTMKAC	1 cut(s)	5
FriOI	GRGCYC	1 cut(s)	798
FspBI	CTAG	9 cut(s)	117, 144, 404, 594, 801, 1667, 1967, 2382, 2477
FspI	TGCGCA	1 cut(s)	2397
GlaI	GCGC	5 cut(s)	1116, 2397, 2492, 2745, 2842
GsaI	CCCAGC	1 cut(s)	349
HaeII	RGCGCY	2 cut(s)	2494, 2844
HaeIII	GGCC	4 cut(s)	231, 858, 1852, 2656
HapII	CCGG	8 cut(s)	234, 290, 1190, 1285, 1384, 1928, 1988, 2653
HgaI	GACGC	1 cut(s)	1031
HhaI	GCGC	5 cut(s)	1117, 2398, 2493, 2746, 2843
Hin6I	GCGC	5 cut(s)	1115, 2396, 2491, 2744, 2841
HinP1I	GCGC	5 cut(s)	1115, 2396, 2491, 2744, 2841
HincII	GTYRAC	3 cut(s)	1021, 1657, 2650
HindII	GTYRAC	3 cut(s)	1021, 1657, 2650
HindIII	AAGCTT	3 cut(s)	566, 573, 779
HpaII	CCGG	8 cut(s)	234, 290, 1190, 1285, 1384, 1928, 1988, 2653
HphI	GGTGA	6 cut(s)	344, 465, 635, 988, 1204, 1807
Hpy166II	GTNNAC	9 cut(s)	6, 263, 1021, 1183, 1547, 1657, 2473, 2650, 2806
Hpy8I	GTNNAC	9 cut(s)	6, 263, 1021, 1183, 1547, 1657, 2473, 2650, 2806
HpyAV	CCTTC	9 cut(s)	44, 525, 971, 1357, 1498, 1528, 1837, 2480, 2692
HpyCH4III	ACNGT	8 cut(s)	471, 481, 853, 869, 1582, 1638, 2413, 2425
HpyCH4IV	ACGT	5 cut(s)	490, 1769, 1864, 2155, 2638
HpySE526I	ACGT	5 cut(s)	490, 1769, 1864, 2155, 2638
HspAI	GCGC	5 cut(s)	1115, 2396, 2491, 2744, 2841
Kpn2I	TCCGGA	1 cut(s)	1987
KpnI	GGTACC	1 cut(s)	1285
Ksp22I	TGATCA	1 cut(s)	2328
Kzo9I	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
LmnI	GCTCC	6 cut(s)	326, 793, 826, 1894, 2280, 2611
MabI	ACCWGGT	1 cut(s)	46
MaeI	CTAG	9 cut(s)	117, 144, 404, 594, 801, 1667, 1967, 2382, 2477
MaeII	ACGT	5 cut(s)	490, 1769, 1864, 2155, 2638
MaeIII	GTNAC	5 cut(s)	471, 481, 580, 1576, 2312
MalI	GATC	7 cut(s)	1054, 1236, 1540, 1686, 2100, 2330, 2513
MbiI	CCGCTC	2 cut(s)	329, 829
MboI	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
MboII	GAAGA	9 cut(s)	128, 447, 995, 1214, 1422, 1513, 1624, 2235, 2663
MflI	RGATCY	4 cut(s)	1052, 1234, 1684, 2098
MhlI	GDGCHC	4 cut(s)	27, 742, 798, 1327
MlyI	GAGTC	7 cut(s)	38, 431, 452, 1070, 1229, 1807, 2455
MmeI	TCCRAC	4 cut(s)	304, 1810, 1885, 2613
Mph1103I	ATGCAT	2 cut(s)	718, 1738
MroI	TCCGGA	1 cut(s)	1987
MroXI	GAANNNNTTC	1 cut(s)	454
MseI	TTAA	9 cut(s)	210, 318, 789, 837, 1128, 1526, 1758, 2117, 2183
MslI	CAYNNNNRTG	5 cut(s)	303, 729, 735, 1350, 2048
MspA1I	CMGCKG	2 cut(s)	1075, 2303
MspCI	CTTAAG	1 cut(s)	1757
MspI	CCGG	8 cut(s)	234, 290, 1190, 1285, 1384, 1928, 1988, 2653
MspR9I	CCNGG	6 cut(s)	48, 103, 234, 1050, 1302, 2609
Mva1269I	GAATGC	2 cut(s)	1915, 2043
MvaI	CCWGG	5 cut(s)	48, 103, 1050, 1302, 2609
MvnI	CGCG	1 cut(s)	768
NciI	CCSGG	1 cut(s)	234
NcoI	CCATGG	1 cut(s)	2663
NdeII	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
NlaIV	GGNNCC	7 cut(s)	232, 1283, 1686, 1764, 1896, 2723, 2793
NmeAIII	GCCGAG	1 cut(s)	179
NmuCI	GTSAC	2 cut(s)	471, 1576
NruI	TCGCGA	1 cut(s)	768
NsbI	TGCGCA	1 cut(s)	2397
NsiI	ATGCAT	2 cut(s)	718, 1738
NspI	RCATGY	1 cut(s)	134
PagI	TCATGA	1 cut(s)	1978
PaqCI	CACCTGC	1 cut(s)	1246
PctI	GAATGC	2 cut(s)	1915, 2043
PdmI	GAANNNNTTC	1 cut(s)	454
PflMI	CCANNNNNTGG	2 cut(s)	47, 973
PfoI	TCCNGGA	1 cut(s)	2607
PinAI	ACCGGT	1 cut(s)	1383
Ple19I	CGATCG	1 cut(s)	2514
PleI	GAGTC	7 cut(s)	37, 430, 451, 1069, 1228, 1806, 2455
PpsI	GAGTC	7 cut(s)	37, 430, 451, 1069, 1228, 1806, 2455
Ppu21I	YACGTR	1 cut(s)	2156
PshBI	ATTAAT	2 cut(s)	318, 1128
Psp124BI	GAGCTC	1 cut(s)	798
Psp1406I	AACGTT	1 cut(s)	1864
Psp6I	CCWGG	5 cut(s)	46, 101, 1048, 1300, 2607
PspEI	GGTNACC	1 cut(s)	580
PspFI	CCCAGC	1 cut(s)	345
PspGI	CCWGG	5 cut(s)	46, 101, 1048, 1300, 2607
PspN4I	GGNNCC	7 cut(s)	232, 1283, 1686, 1764, 1896, 2723, 2793
PspPI	GGNCC	4 cut(s)	230, 1851, 2473, 2792
PstI	CTGCAG	1 cut(s)	154
PstNI	CAGNNNCTG	3 cut(s)	1075, 1238, 2464
PsuI	RGATCY	4 cut(s)	1052, 1234, 1684, 2098
PvuI	CGATCG	1 cut(s)	2514
PvuII	CAGCTG	2 cut(s)	1075, 2303
RgaI	GCGATCGC	1 cut(s)	2514
RruI	TCGCGA	1 cut(s)	768
RsaI	GTAC	8 cut(s)	148, 169, 893, 1283, 1875, 2308, 2322, 2573
RsaNI	GTAC	8 cut(s)	147, 168, 892, 1282, 1874, 2307, 2321, 2572
RseI	CAYNNNNRTG	5 cut(s)	303, 729, 735, 1350, 2048
SacI	GAGCTC	1 cut(s)	798
SaqAI	TTAA	9 cut(s)	210, 318, 789, 837, 1128, 1526, 1758, 2117, 2183
Sau3AI	GATC	7 cut(s)	1052, 1234, 1538, 1684, 2098, 2328, 2511
Sau96I	GGNCC	4 cut(s)	230, 1851, 2473, 2792
ScaI	AGTACT	1 cut(s)	148
SchI	GAGTC	7 cut(s)	38, 431, 452, 1070, 1229, 1807, 2455
ScrFI	CCNGG	6 cut(s)	48, 103, 234, 1050, 1302, 2609
SduI	GDGCHC	4 cut(s)	27, 742, 798, 1327
SexAI	ACCWGGT	1 cut(s)	46
SfaAI	GCGATCGC	1 cut(s)	2514
SfcI	CTRYAG	2 cut(s)	150, 1067
SgfI	GCGATCGC	1 cut(s)	2514
SinI	GGWCC	2 cut(s)	2473, 2792
SmiMI	CAYNNNNRTG	5 cut(s)	303, 729, 735, 1350, 2048
SmlI	CTYRAG	4 cut(s)	1757, 1787, 2222, 2776
SmoI	CTYRAG	4 cut(s)	1757, 1787, 2222, 2776
SpeI	ACTAGT	1 cut(s)	800
SsiI	CCGC	4 cut(s)	94, 329, 829, 2787
SspMI	CTAG	9 cut(s)	117, 144, 404, 594, 801, 1667, 1967, 2382, 2477
SstI	GAGCTC	1 cut(s)	798
StyD4I	CCNGG	6 cut(s)	46, 101, 232, 1048, 1300, 2607
StyI	CCWWGG	3 cut(s)	672, 1672, 2663
TaaI	ACNGT	8 cut(s)	471, 481, 853, 869, 1582, 1638, 2413, 2425
TaiI	ACGT	5 cut(s)	493, 1772, 1867, 2158, 2641
TaqI	TCGA	3 cut(s)	658, 719, 2688
TatI	WGTACW	4 cut(s)	146, 167, 891, 2571
TauI	GCSGC	1 cut(s)	97
Tru1I	TTAA	9 cut(s)	210, 318, 789, 837, 1128, 1526, 1758, 2117, 2183
Tru9I	TTAA	9 cut(s)	210, 318, 789, 837, 1128, 1526, 1758, 2117, 2183
TscAI	CASTG	9 cut(s)	25, 270, 543, 742, 874, 1461, 1587, 2074, 2808
TseFI	GTSAC	2 cut(s)	471, 1576
Tsp45I	GTSAC	2 cut(s)	471, 1576
TspGWI	ACGGA	2 cut(s)	1238, 1382
TspRI	CASTG	9 cut(s)	25, 270, 543, 742, 874, 1461, 1587, 2074, 2808
Van91I	CCANNNNNTGG	2 cut(s)	47, 973
Vha464I	CTTAAG	1 cut(s)	1757
VpaK11BI	GGWCC	2 cut(s)	2473, 2792
VspI	ATTAAT	2 cut(s)	318, 1128
XapI	RAATTY	3 cut(s)	124, 242, 606
XbaI	TCTAGA	1 cut(s)	1666
XceI	RCATGY	1 cut(s)	134
XmiI	GTMKAC	1 cut(s)	5
XmnI	GAANNNNTTC	1 cut(s)	454
XspI	CTAG	9 cut(s)	117, 144, 404, 594, 801, 1667, 1967, 2382, 2477
ZrmI	AGTACT	1 cut(s)	148
Zsp2I	ATGCAT	2 cut(s)	718, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.