CCR4-NOT transcription complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02080 AT1G02080 AT1G02080 |
| fragaria_vesca | FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 FvH4_7g10770 |
| malus_domestica | MD02G1214300.v1.1 MD07G1112500.v1.1 |
| prunus_persica | Prupe.2G135900_v2.0.a1 Prupe.2G135900_v2.0.a1 |
| pyrus_communis | pycom07g09730 pycom07g09740 pycom07g09780 pycom11g20140 |
| rosa_chinensis | RchiOBHm_Chr1g0348711 |
| rosa_laevigata | RLG00000028628 |
| rosa_multiflora | Rmu_sc0001674.1_g000008 |
| rosa_roxburghii | Rroxscaffold_4G00306720 |
| rosa_rugosa | Rorug01G0197100 Rorug01G0197200 Rorug01G0197300 |
| rosa_samantha | Rh1AG214400 Rh1BG181000 Rh1CG199100 Rh1DG211000 |
| rosa_wichuraiana | Rw1G018170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1631 |
| AccB1I | GGYRCC | 1 cut(s) | 1651 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 799 |
| AccIII | TCCGGA | 1 cut(s) | 1016 |
| AclWI | GGATC | 4 cut(s) | 217, 843, 1074, 1447 |
| AcsI | RAATTY | 3 cut(s) | 1042, 1122, 1172 |
| AfaI | GTAC | 1 cut(s) | 1549 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 799, 893, 1463 |
| AgsI | TTSAA | 6 cut(s) | 158, 289, 390, 858, 976, 1741 |
| AjnI | CCWGG | 3 cut(s) | 461, 1507, 1682 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 410, 442, 654, 686 |
| AluBI | AGCT | 7 cut(s) | 23, 331, 648, 765, 979, 1034, 1140 |
| AluI | AGCT | 7 cut(s) | 23, 331, 648, 765, 979, 1034, 1140 |
| Alw21I | GWGCWC | 2 cut(s) | 333, 1525 |
| Alw26I | GTCTC | 1 cut(s) | 783 |
| AlwI | GGATC | 4 cut(s) | 217, 843, 1074, 1447 |
| Aor13HI | TCCGGA | 1 cut(s) | 1016 |
| ApeKI | GCWGC | 2 cut(s) | 979, 1637 |
| ApoI | RAATTY | 3 cut(s) | 1042, 1122, 1172 |
| AspS9I | GGNCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| AsuC2I | CCSGG | 2 cut(s) | 197, 1569 |
| AsuHPI | GGTGA | 2 cut(s) | 761, 1586 |
| AsuII | TTCGAA | 1 cut(s) | 1482 |
| AvaII | GGWCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| BanI | GGYRCC | 1 cut(s) | 1651 |
| BanII | GRGCYC | 2 cut(s) | 333, 434 |
| BbsI | GAAGAC | 2 cut(s) | 351, 1389 |
| Bbv12I | GWGCWC | 2 cut(s) | 333, 1525 |
| BbvI | GCAGC | 2 cut(s) | 966, 1649 |
| BccI | CCATC | 1 cut(s) | 200 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 306, 340 |
| BciT130I | CCWGG | 3 cut(s) | 463, 1509, 1684 |
| BcnI | CCSGG | 2 cut(s) | 197, 1569 |
| BcoDI | GTCTC | 1 cut(s) | 783 |
| BfaI | CTAG | 5 cut(s) | 60, 510, 701, 888, 920 |
| BfmI | CTRYAG | 2 cut(s) | 80, 819 |
| BfuAI | ACCTGC | 1 cut(s) | 1631 |
| BglII | AGATCT | 1 cut(s) | 1234 |
| BisI | GCNGC | 2 cut(s) | 980, 1638 |
| BlsI | GCNGC | 2 cut(s) | 981, 1639 |
| BmcAI | AGTACT | 1 cut(s) | 1549 |
| Bme1390I | CCNGG | 5 cut(s) | 197, 463, 1509, 1569, 1684 |
| Bme18I | GGWCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| BmgT120I | GGNCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| BmiI | GGNNCC | 5 cut(s) | 190, 447, 523, 844, 1653 |
| BmrFI | CCNGG | 5 cut(s) | 197, 463, 1509, 1569, 1684 |
| BmrI | ACTGGG | 1 cut(s) | 256 |
| BmsI | GCATC | 2 cut(s) | 387, 1496 |
| BmuI | ACTGGG | 1 cut(s) | 256 |
| BpiI | GAAGAC | 2 cut(s) | 351, 1389 |
| BpmI | CTGGAG | 2 cut(s) | 1539, 1705 |
| Bpu10I | CCTNAGC | 1 cut(s) | 998 |
| Bpu14I | TTCGAA | 1 cut(s) | 1482 |
| BpuEI | CTTGAG | 2 cut(s) | 164, 1014 |
| BpuMI | CCSGG | 2 cut(s) | 197, 1569 |
| BsaAI | YACGTR | 1 cut(s) | 1301 |
| BsaJI | CCNNGG | 2 cut(s) | 369, 661 |
| BsaWI | WCCGGW | 2 cut(s) | 486, 1016 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 473, 503, 998, 1028 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 799, 893, 1463 |
| Bse3DI | GCAATG | 1 cut(s) | 618 |
| BseAI | TCCGGA | 1 cut(s) | 1016 |
| BseBI | CCWGG | 3 cut(s) | 463, 1509, 1684 |
| BseDI | CCNNGG | 2 cut(s) | 369, 661 |
| BseGI | GGATG | 2 cut(s) | 192, 402 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 799, 893, 1463 |
| BseMI | GCAATG | 1 cut(s) | 618 |
| BseMII | CTCAG | 4 cut(s) | 346, 516, 1217, 1386 |
| BseRI | GAGGAG | 1 cut(s) | 1515 |
| BseXI | GCAGC | 2 cut(s) | 966, 1649 |
| BsgI | GTGCAG | 2 cut(s) | 37, 977 |
| BshNI | GGYRCC | 1 cut(s) | 1651 |
| BsiHKAI | GWGCWC | 2 cut(s) | 333, 1525 |
| BsiSI | CCGG | 5 cut(s) | 197, 487, 1017, 1446, 1568 |
| BslFI | GGGAC | 4 cut(s) | 174, 221, 244, 1168 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 799, 893, 1463 |
| BsmAI | GTCTC | 1 cut(s) | 783 |
| BsmFI | GGGAC | 4 cut(s) | 174, 221, 244, 1168 |
| BsmI | GAATGC | 1 cut(s) | 879 |
| Bsp119I | TTCGAA | 1 cut(s) | 1482 |
| Bsp1286I | GDGCHC | 3 cut(s) | 333, 434, 1525 |
| Bsp13I | TCCGGA | 1 cut(s) | 1016 |
| Bsp143I | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| BspCNI | CTCAG | 4 cut(s) | 345, 515, 1218, 1385 |
| BspEI | TCCGGA | 1 cut(s) | 1016 |
| BspLI | GGNNCC | 5 cut(s) | 190, 447, 523, 844, 1653 |
| BspMAI | CTGCAG | 1 cut(s) | 84 |
| BspMI | ACCTGC | 1 cut(s) | 1631 |
| BspPI | GGATC | 4 cut(s) | 217, 843, 1074, 1447 |
| BspT104I | TTCGAA | 1 cut(s) | 1482 |
| BspT107I | GGYRCC | 1 cut(s) | 1651 |
| BsrDI | GCAATG | 1 cut(s) | 618 |
| BssECI | CCNNGG | 2 cut(s) | 369, 661 |
| BssMI | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| BssT1I | CCWWGG | 2 cut(s) | 369, 661 |
| Bst2UI | CCWGG | 3 cut(s) | 463, 1509, 1684 |
| Bst4CI | ACNGT | 3 cut(s) | 235, 258, 1338 |
| Bst6I | CTCTTC | 2 cut(s) | 681, 1239 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 88, 1339 |
| BstBAI | YACGTR | 1 cut(s) | 1301 |
| BstBI | TTCGAA | 1 cut(s) | 1482 |
| BstC8I | GCNNGC | 1 cut(s) | 1163 |
| BstDEI | CTNAG | 6 cut(s) | 161, 332, 502, 998, 1226, 1372 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1461 |
| BstF5I | GGATG | 2 cut(s) | 192, 402 |
| BstKTI | GATC | 8 cut(s) | 212, 473, 838, 853, 1069, 1237, 1354, 1455 |
| BstMAI | GTCTC | 1 cut(s) | 783 |
| BstMBI | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 88, 629, 1339, 1529 |
| BstNI | CCWGG | 3 cut(s) | 463, 1509, 1684 |
| BstSCI | CCNGG | 5 cut(s) | 195, 461, 1507, 1567, 1682 |
| BstSFI | CTRYAG | 2 cut(s) | 80, 819 |
| BstV1I | GCAGC | 2 cut(s) | 966, 1649 |
| BstV2I | GAAGAC | 2 cut(s) | 351, 1389 |
| BstX2I | RGATCY | 3 cut(s) | 835, 1066, 1234 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 370, 1301 |
| BstYI | RGATCY | 3 cut(s) | 835, 1066, 1234 |
| BtsCI | GGATG | 2 cut(s) | 192, 402 |
| BtsI | GCAGTG | 1 cut(s) | 989 |
| BtsIMutI | CAGTG | 2 cut(s) | 989, 1061 |
| BveI | ACCTGC | 1 cut(s) | 1631 |
| Cac8I | GCNNGC | 1 cut(s) | 1163 |
| Cfr13I | GGNCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| Csp6I | GTAC | 1 cut(s) | 1548 |
| CviAII | CATG | 4 cut(s) | 435, 775, 1450, 1734 |
| CviQI | GTAC | 1 cut(s) | 1548 |
| DdeI | CTNAG | 6 cut(s) | 161, 332, 502, 998, 1226, 1372 |
| DpnI | GATC | 8 cut(s) | 211, 472, 837, 852, 1068, 1236, 1353, 1454 |
| DpnII | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| Eam1104I | CTCTTC | 2 cut(s) | 681, 1239 |
| EarI | CTCTTC | 2 cut(s) | 681, 1239 |
| Ecl136II | GAGCTC | 1 cut(s) | 331 |
| Eco130I | CCWWGG | 2 cut(s) | 369, 661 |
| Eco24I | GRGCYC | 2 cut(s) | 333, 434 |
| Eco32I | GATATC | 1 cut(s) | 1731 |
| Eco47I | GGWCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| Eco53kI | GAGCTC | 1 cut(s) | 331 |
| EcoICRI | GAGCTC | 1 cut(s) | 331 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1461 |
| EcoO109I | RGGNCCY | 2 cut(s) | 446, 728 |
| EcoRII | CCWGG | 3 cut(s) | 461, 1507, 1682 |
| EcoRV | GATATC | 1 cut(s) | 1731 |
| EcoT14I | CCWWGG | 2 cut(s) | 369, 661 |
| EcoT38I | GRGCYC | 2 cut(s) | 333, 434 |
| ErhI | CCWWGG | 2 cut(s) | 369, 661 |
| FaeI | CATG | 4 cut(s) | 438, 778, 1453, 1737 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 654, 686, 1381, 1413 |
| FaqI | GGGAC | 4 cut(s) | 174, 221, 244, 1168 |
| FatI | CATG | 4 cut(s) | 434, 774, 1449, 1733 |
| Fnu4HI | GCNGC | 2 cut(s) | 980, 1638 |
| FokI | GGATG | 2 cut(s) | 179, 409 |
| FriOI | GRGCYC | 2 cut(s) | 333, 434 |
| Fsp4HI | GCNGC | 2 cut(s) | 980, 1638 |
| FspBI | CTAG | 5 cut(s) | 60, 510, 701, 888, 920 |
| GluI | GCNGC | 2 cut(s) | 980, 1638 |
| GsuI | CTGGAG | 2 cut(s) | 1539, 1705 |
| HapII | CCGG | 5 cut(s) | 197, 487, 1017, 1446, 1568 |
| Hin1II | CATG | 4 cut(s) | 438, 778, 1453, 1737 |
| HincII | GTYRAC | 3 cut(s) | 140, 297, 599 |
| HindII | GTYRAC | 3 cut(s) | 140, 297, 599 |
| HindIII | AAGCTT | 3 cut(s) | 763, 1032, 1138 |
| HinfI | GANTC | 6 cut(s) | 64, 148, 200, 418, 506, 1564 |
| HpaII | CCGG | 5 cut(s) | 197, 487, 1017, 1446, 1568 |
| HphI | GGTGA | 2 cut(s) | 761, 1586 |
| Hpy166II | GTNNAC | 4 cut(s) | 140, 297, 599, 1198 |
| Hpy188I | TCNGA | 4 cut(s) | 328, 411, 505, 1422 |
| Hpy8I | GTNNAC | 4 cut(s) | 140, 297, 599, 1198 |
| HpyAV | CCTTC | 3 cut(s) | 459, 468, 587 |
| HpyCH4III | ACNGT | 3 cut(s) | 235, 258, 1338 |
| HpyCH4IV | ACGT | 2 cut(s) | 279, 1300 |
| HpyCH4V | TGCA | 9 cut(s) | 54, 82, 91, 632, 994, 1039, 1333, 1342, 1637 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 88, 629, 1339, 1529 |
| HpyF3I | CTNAG | 6 cut(s) | 161, 332, 502, 998, 1226, 1372 |
| HpySE526I | ACGT | 2 cut(s) | 279, 1300 |
| Hsp92II | CATG | 4 cut(s) | 438, 778, 1453, 1737 |
| Kpn2I | TCCGGA | 1 cut(s) | 1016 |
| Kzo9I | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| LmnI | GCTCC | 8 cut(s) | 20, 328, 628, 653, 842, 987, 1528, 1558 |
| Lsp1109I | GCAGC | 2 cut(s) | 966, 1649 |
| LweI | GCATC | 2 cut(s) | 387, 1496 |
| MaeI | CTAG | 5 cut(s) | 60, 510, 701, 888, 920 |
| MaeII | ACGT | 2 cut(s) | 279, 1300 |
| MaeIII | GTNAC | 4 cut(s) | 173, 307, 696, 1304 |
| MalI | GATC | 8 cut(s) | 211, 472, 837, 852, 1068, 1236, 1353, 1454 |
| MboI | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| MboII | GAAGA | 8 cut(s) | 351, 668, 1145, 1229, 1256, 1389, 1482, 1651 |
| MflI | RGATCY | 3 cut(s) | 835, 1066, 1234 |
| MhlI | GDGCHC | 3 cut(s) | 333, 434, 1525 |
| MluCI | AATT | 5 cut(s) | 364, 1042, 1122, 1172, 1744 |
| MlyI | GAGTC | 2 cut(s) | 58, 1558 |
| MmeI | TCCRAC | 3 cut(s) | 675, 735, 1603 |
| MroI | TCCGGA | 1 cut(s) | 1016 |
| MseI | TTAA | 9 cut(s) | 341, 377, 569, 582, 614, 687, 869, 1149, 1176 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1299 |
| MspI | CCGG | 5 cut(s) | 197, 487, 1017, 1446, 1568 |
| MspR9I | CCNGG | 5 cut(s) | 197, 463, 1509, 1569, 1684 |
| Mva1269I | GAATGC | 1 cut(s) | 879 |
| MvaI | CCWGG | 3 cut(s) | 463, 1509, 1684 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 88, 629, 1339, 1529 |
| NciI | CCSGG | 2 cut(s) | 197, 1569 |
| NdeII | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| NlaIII | CATG | 4 cut(s) | 438, 778, 1453, 1737 |
| NlaIV | GGNNCC | 5 cut(s) | 190, 447, 523, 844, 1653 |
| NmuCI | GTSAC | 1 cut(s) | 1304 |
| NspV | TTCGAA | 1 cut(s) | 1482 |
| PctI | GAATGC | 1 cut(s) | 879 |
| PfeI | GAWTC | 4 cut(s) | 148, 200, 418, 506 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 799 |
| PfoI | TCCNGGA | 2 cut(s) | 195, 1682 |
| PkrI | GCNGC | 2 cut(s) | 981, 1639 |
| PleI | GAGTC | 2 cut(s) | 58, 1558 |
| PpsI | GAGTC | 2 cut(s) | 58, 1558 |
| Ppu21I | YACGTR | 1 cut(s) | 1301 |
| PpuMI | RGGWCCY | 2 cut(s) | 446, 728 |
| Psp124BI | GAGCTC | 1 cut(s) | 333 |
| Psp5II | RGGWCCY | 2 cut(s) | 446, 728 |
| Psp6I | CCWGG | 3 cut(s) | 461, 1507, 1682 |
| PspGI | CCWGG | 3 cut(s) | 461, 1507, 1682 |
| PspN4I | GGNNCC | 5 cut(s) | 190, 447, 523, 844, 1653 |
| PspPI | GGNCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| PspPPI | RGGWCCY | 2 cut(s) | 446, 728 |
| PstI | CTGCAG | 1 cut(s) | 84 |
| PsuI | RGATCY | 3 cut(s) | 835, 1066, 1234 |
| RsaI | GTAC | 1 cut(s) | 1549 |
| RsaNI | GTAC | 1 cut(s) | 1548 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1299 |
| SacI | GAGCTC | 1 cut(s) | 333 |
| SaqAI | TTAA | 9 cut(s) | 341, 377, 569, 582, 614, 687, 869, 1149, 1176 |
| SatI | GCNGC | 2 cut(s) | 980, 1638 |
| Sau3AI | GATC | 8 cut(s) | 209, 470, 835, 850, 1066, 1234, 1351, 1452 |
| Sau96I | GGNCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| ScaI | AGTACT | 1 cut(s) | 1549 |
| SchI | GAGTC | 2 cut(s) | 58, 1558 |
| ScrFI | CCNGG | 5 cut(s) | 197, 463, 1509, 1569, 1684 |
| SduI | GDGCHC | 3 cut(s) | 333, 434, 1525 |
| SfaNI | GCATC | 2 cut(s) | 387, 1496 |
| SfcI | CTRYAG | 2 cut(s) | 80, 819 |
| SfuI | TTCGAA | 1 cut(s) | 1482 |
| SinI | GGWCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1299 |
| SmlI | CTYRAG | 2 cut(s) | 143, 1029 |
| SmoI | CTYRAG | 2 cut(s) | 143, 1029 |
| Sse9I | AATT | 5 cut(s) | 364, 1042, 1122, 1172, 1744 |
| SspI | AATATT | 1 cut(s) | 574 |
| SspMI | CTAG | 5 cut(s) | 60, 510, 701, 888, 920 |
| SstI | GAGCTC | 1 cut(s) | 333 |
| StyD4I | CCNGG | 5 cut(s) | 195, 461, 1507, 1567, 1682 |
| StyI | CCWWGG | 2 cut(s) | 369, 661 |
| TaaI | ACNGT | 3 cut(s) | 235, 258, 1338 |
| TaiI | ACGT | 2 cut(s) | 282, 1303 |
| TaqI | TCGA | 2 cut(s) | 1430, 1482 |
| TasI | AATT | 5 cut(s) | 364, 1042, 1122, 1172, 1744 |
| TatI | WGTACW | 1 cut(s) | 1547 |
| TfiI | GAWTC | 4 cut(s) | 148, 200, 418, 506 |
| Tru1I | TTAA | 9 cut(s) | 341, 377, 569, 582, 614, 687, 869, 1149, 1176 |
| Tru9I | TTAA | 9 cut(s) | 341, 377, 569, 582, 614, 687, 869, 1149, 1176 |
| TscAI | CASTG | 2 cut(s) | 996, 1068 |
| TseFI | GTSAC | 1 cut(s) | 1304 |
| TseI | GCWGC | 2 cut(s) | 979, 1637 |
| Tsp45I | GTSAC | 1 cut(s) | 1304 |
| TspDTI | ATGAA | 9 cut(s) | 192, 441, 540, 567, 763, 1146, 1651, 1696, 1728 |
| TspGWI | ACGGA | 1 cut(s) | 430 |
| TspRI | CASTG | 2 cut(s) | 996, 1068 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 799 |
| VpaK11BI | GGWCC | 6 cut(s) | 188, 446, 484, 665, 728, 1376 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1461 |
| XapI | RAATTY | 3 cut(s) | 1042, 1122, 1172 |
| XbaI | TCTAGA | 1 cut(s) | 919 |
| XspI | CTAG | 5 cut(s) | 60, 510, 701, 888, 920 |
| ZrmI | AGTACT | 1 cut(s) | 1549 |