Prupe.2G152800_v2.0.a1

Peroxisome biogenesis protein 16-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
20730653 .. 20734345
3693 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G152800.2

Sequence Viewer

Length: 1101 bp
ATGGAGGCTTACAAGAAATGGGTTAGGGAGAACAAGGACTATGTGCACTCGTTGGAGTCTCTGGCCAATGGATTCACATGGCTTCTACCCGAACGGTTTTCTGAGTCAGAGATAGGACCAGAAGCAGTAACTGCTCTCTTTGGAGTAATAACTGCTATCAATGAACATATCATCGAAACAGCTCCTCCTCCAATGAATGTTGGCTCTGCTGAGTGTTATTCTTTTCCCTATGCATTGTGTATATCTGCACTAAAGGACTTGGAAACGTTGGTTGAAGTTGTGGCTCAACAGTATTTTGGTGATGAGAAAAAATGGAATTTCATTGCTGCTATGGAGGCTATCAAGGTGCTAGTTAGGTTCGCTTTATTCCGGAACAGTGGATATAAGATGCTTCTGCATGGAGGAGAGACACCAAATGATGAAAAGCATTTGGCTGCATCAATTCCTCAACGTAATGGTTTTACAAAGCCTGGAGGGCAGCTTGGGCCTGGGTACTTAAGAAATAATAATGGACAGGACGCATGGAATTTAGAAGGAAGAGCACTATCCGCACTGAGTAGGTTTGGAGAGAATGCTAGGATGGTTTCAGAACCAGTATGGTTGCGTAGAGTTCAACACCAGCATGCAATTATGGAGCCTCCAACTCCAGTGGTTAAGAGGCCGACTCTTTCCACCATATTGTCCAAAAAGGGTCTTCATGGGGCATTTTATTTGATTGGGGAAGCGCTATTTATAACAAGACCACTTATCTATGTTTTATTTATTCGAAAATATGGAGTTCGCTCGTGGATTCCTTGGTTTCTTTCGCTGGCTGTGGACTTCACTGGGATGGGCATTCTTTCACGAATTACTTCGTCAAGGGTTGGTACCGAGCAGCAGTTTCATCTTTCTGACTCTGAAAAGAATGAGGTTAAAAGACGAAAGATGTTATGGGCACTTTACCTCATGAGAGATCCATTTTTTAGCAAGTATACCAGGCAAAAACTTGAAAGCACCGAGAAAGTGTTGGAACCTGTTCCTATTGTTGGGTTTCTTACAGCAAAACTTGTCGAGCTGATTGTAGGAGCTCAGACGAGGTATACATACATGTCAGGATCATAA

Protein Analysis

367

Amino Acids

41.47

Weight (kDa)

9.2

Isoelectric Point (pI)

40.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 734
Acc65I GGTACC 1 cut(s) 866
AccB1I GGYRCC 1 cut(s) 866
AccI GTMKAC 2 cut(s) 971, 1079
AccIII TCCGGA 1 cut(s) 369
AciI CCGC 1 cut(s) 549
AclI AACGTT 1 cut(s) 266
AclWI GGATC 1 cut(s) 947
AcoI YGGCCR 1 cut(s) 63
AcsI RAATTY 2 cut(s) 316, 526
AfaI GTAC 2 cut(s) 494, 868
AfeI AGCGCT 1 cut(s) 726
AfiI CCNNNNNNNGG 1 cut(s) 1025
AflII CTTAAG 1 cut(s) 496
AflIII ACRYGT 1 cut(s) 1086
AgsI TTSAA 3 cut(s) 275, 614, 989
AjnI CCWGG 3 cut(s) 469, 487, 974
AluBI AGCT 4 cut(s) 182, 481, 1054, 1067
AluI AGCT 4 cut(s) 182, 481, 1054, 1067
Alw21I GWGCWC 3 cut(s) 48, 544, 1069
Alw26I GTCTC 2 cut(s) 63, 401
Alw44I GTGCAC 1 cut(s) 44
AlwI GGATC 1 cut(s) 947
AlwNI CAGNNNCTG 1 cut(s) 131
Aor13HI TCCGGA 1 cut(s) 369
Aor51HI AGCGCT 1 cut(s) 726
AoxI GGCC 3 cut(s) 63, 485, 659
ApaLI GTGCAC 1 cut(s) 44
ApeKI GCWGC 4 cut(s) 326, 434, 478, 874
ApoI RAATTY 2 cut(s) 316, 526
Asp700I GAANNNNTTC 2 cut(s) 850, 1014
Asp718I GGTACC 1 cut(s) 866
AspLEI GCGC 1 cut(s) 727
AspS9I GGNCC 2 cut(s) 116, 485
AsuHPI GGTGA 1 cut(s) 311
AsuII TTCGAA 1 cut(s) 766
AvaII GGWCC 1 cut(s) 116
BaeGI GKGCMC 2 cut(s) 48, 937
BalI TGGCCA 1 cut(s) 65
BanI GGYRCC 1 cut(s) 866
BanII GRGCYC 1 cut(s) 1069
BauI CACGAG 1 cut(s) 784
BbsI GAAGAC 1 cut(s) 686
Bbv12I GWGCWC 3 cut(s) 48, 544, 1069
BbvI GCAGC 4 cut(s) 313, 421, 490, 886
BccI CCATC 2 cut(s) 574, 823
BciT130I CCWGG 3 cut(s) 471, 489, 976
BcoDI GTCTC 2 cut(s) 63, 401
BfaI CTAG 2 cut(s) 350, 576
BfoI RGCGCY 1 cut(s) 728
BfrI CTTAAG 1 cut(s) 496
BglI GCCNNNNNGGC 1 cut(s) 475
BisI GCNGC 4 cut(s) 327, 435, 479, 875
BlsI GCNGC 4 cut(s) 328, 436, 480, 876
Bme1390I CCNGG 3 cut(s) 471, 489, 976
Bme18I GGWCC 1 cut(s) 116
BmgT120I GGNCC 2 cut(s) 116, 485
BmiI GGNNCC 3 cut(s) 636, 868, 1011
BmrFI CCNGG 3 cut(s) 471, 489, 976
BmrI ACTGGG 1 cut(s) 834
BmsI GCATC 2 cut(s) 378, 446
BmuI ACTGGG 1 cut(s) 834
BpiI GAAGAC 1 cut(s) 686
BplI GAGNNNNNCTC 2 cut(s) 649, 681
BpmI CTGGAG 2 cut(s) 492, 630
Bpu14I TTCGAA 1 cut(s) 766
BsaJI CCNNGG 2 cut(s) 488, 794
BsaWI WCCGGW 1 cut(s) 369
BsaXI ACNNNNNCTCC 2 cut(s) 169, 199
Bsc4I CCNNNNNNNGG 1 cut(s) 1025
Bse1I ACTGG 3 cut(s) 593, 647, 829
Bse3DI GCAATG 1 cut(s) 321
BseAI TCCGGA 1 cut(s) 369
BseBI CCWGG 3 cut(s) 471, 489, 976
BseDI CCNNGG 2 cut(s) 488, 794
BseGI GGATG 2 cut(s) 585, 834
BseLI CCNNNNNNNGG 1 cut(s) 1025
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 4 cut(s) 93, 201, 545, 1082
BseNI ACTGG 3 cut(s) 593, 647, 829
BseRI GAGGAG 3 cut(s) 174, 177, 417
BseSI GKGCMC 2 cut(s) 48, 937
BseXI GCAGC 4 cut(s) 313, 421, 490, 886
BsgI GTGCAG 1 cut(s) 231
BshFI GGCC 3 cut(s) 65, 487, 661
BshNI GGYRCC 1 cut(s) 866
BsiHKAI GWGCWC 3 cut(s) 48, 544, 1069
BsiSI CCGG 1 cut(s) 370
BslI CCNNNNNNNGG 1 cut(s) 1025
BsmAI GTCTC 2 cut(s) 63, 401
BsmI GAATGC 2 cut(s) 577, 834
BsnI GGCC 3 cut(s) 65, 487, 661
Bsp119I TTCGAA 1 cut(s) 766
Bsp1286I GDGCHC 4 cut(s) 48, 544, 937, 1069
Bsp13I TCCGGA 1 cut(s) 369
Bsp143I GATC 2 cut(s) 952, 1094
BspACI CCGC 1 cut(s) 549
BspANI GGCC 3 cut(s) 65, 487, 661
BspCNI CTCAG 4 cut(s) 94, 202, 546, 1081
BspEI TCCGGA 1 cut(s) 369
BspHI TCATGA 1 cut(s) 945
BspLI GGNNCC 3 cut(s) 636, 868, 1011
BspPI GGATC 1 cut(s) 947
BspQI GCTCTTC 1 cut(s) 532
BspT104I TTCGAA 1 cut(s) 766
BspT107I GGYRCC 1 cut(s) 866
BspTI CTTAAG 1 cut(s) 496
BsrDI GCAATG 1 cut(s) 321
BsrI ACTGG 3 cut(s) 593, 647, 829
BssECI CCNNGG 2 cut(s) 488, 794
BssMI GATC 2 cut(s) 952, 1094
BssNAI GTATAC 2 cut(s) 972, 1080
BssSI CACGAG 1 cut(s) 784
BssT1I CCWWGG 1 cut(s) 794
Bst1107I GTATAC 2 cut(s) 972, 1080
Bst2BI CACGAG 1 cut(s) 784
Bst2UI CCWGG 3 cut(s) 471, 489, 976
Bst4CI ACNGT 3 cut(s) 96, 291, 377
Bst6I CTCTTC 1 cut(s) 532
BstAFI CTTAAG 1 cut(s) 496
BstAPI GCANNNNNTGC 1 cut(s) 131
BstBI TTCGAA 1 cut(s) 766
BstC8I GCNNGC 2 cut(s) 624, 810
BstDEI CTNAG 4 cut(s) 102, 210, 554, 1068
BstF5I GGATG 2 cut(s) 585, 834
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 1 cut(s) 727
BstKTI GATC 2 cut(s) 955, 1097
BstMAI GTCTC 2 cut(s) 63, 401
BstMBI GATC 2 cut(s) 952, 1094
BstMWI GCNNNNNNNGC 5 cut(s) 131, 335, 475, 484, 548
BstNI CCWGG 3 cut(s) 471, 489, 976
BstNSI RCATGY 2 cut(s) 626, 1090
BstSCI CCNGG 3 cut(s) 469, 487, 974
BstSLI GKGCMC 2 cut(s) 48, 937
BstV1I GCAGC 4 cut(s) 313, 421, 490, 886
BstV2I GAAGAC 1 cut(s) 686
BstX2I RGATCY 1 cut(s) 952
BstYI RGATCY 1 cut(s) 952
BstZ17I GTATAC 2 cut(s) 972, 1080
BsuRI GGCC 3 cut(s) 65, 487, 661
BtsCI GGATG 2 cut(s) 585, 834
BtsIMutI CAGTG 4 cut(s) 382, 551, 654, 822
Cac8I GCNNGC 2 cut(s) 624, 810
CaiI CAGNNNCTG 1 cut(s) 131
CciI TCATGA 1 cut(s) 945
CfoI GCGC 1 cut(s) 727
Cfr13I GGNCC 2 cut(s) 116, 485
CseI GACGC 1 cut(s) 527
Csp6I GTAC 2 cut(s) 493, 867
CspCI CAANNNNNGTGG 2 cut(s) 630, 665
CviAII CATG 7 cut(s) 78, 398, 522, 623, 698, 946, 1087
CviQI GTAC 2 cut(s) 493, 867
DdeI CTNAG 4 cut(s) 102, 210, 554, 1068
DpnI GATC 2 cut(s) 954, 1096
DpnII GATC 2 cut(s) 952, 1094
EaeI YGGCCR 1 cut(s) 63
Eam1104I CTCTTC 1 cut(s) 532
EarI CTCTTC 1 cut(s) 532
Ecl136II GAGCTC 1 cut(s) 1067
Eco130I CCWWGG 1 cut(s) 794
Eco24I GRGCYC 1 cut(s) 1069
Eco47I GGWCC 1 cut(s) 116
Eco47III AGCGCT 1 cut(s) 726
Eco53kI GAGCTC 1 cut(s) 1067
EcoICRI GAGCTC 1 cut(s) 1067
EcoRII CCWGG 3 cut(s) 469, 487, 974
EcoT14I CCWWGG 1 cut(s) 794
EcoT22I ATGCAT 1 cut(s) 235
EcoT38I GRGCYC 1 cut(s) 1069
ErhI CCWWGG 1 cut(s) 794
FaeI CATG 7 cut(s) 81, 401, 525, 626, 701, 949, 1090
FatI CATG 7 cut(s) 77, 397, 521, 622, 697, 945, 1086
FblI GTMKAC 2 cut(s) 971, 1079
Fnu4HI GCNGC 4 cut(s) 327, 435, 479, 875
FokI GGATG 2 cut(s) 592, 841
FriOI GRGCYC 1 cut(s) 1069
Fsp4HI GCNGC 4 cut(s) 327, 435, 479, 875
FspBI CTAG 2 cut(s) 350, 576
GlaI GCGC 1 cut(s) 726
GluI GCNGC 4 cut(s) 327, 435, 479, 875
GsuI CTGGAG 2 cut(s) 492, 630
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 3 cut(s) 65, 487, 661
HapII CCGG 1 cut(s) 370
HgaI GACGC 1 cut(s) 527
HhaI GCGC 1 cut(s) 727
Hin1II CATG 7 cut(s) 81, 401, 525, 626, 701, 949, 1090
Hin6I GCGC 1 cut(s) 725
HinP1I GCGC 1 cut(s) 725
HinfI GANTC 6 cut(s) 56, 72, 104, 664, 790, 893
HpaII CCGG 1 cut(s) 370
HphI GGTGA 1 cut(s) 311
Hpy166II GTNNAC 4 cut(s) 46, 817, 972, 1080
Hpy188I TCNGA 6 cut(s) 103, 109, 589, 892, 898, 1071
Hpy188III TCNNGA 4 cut(s) 370, 843, 946, 1092
Hpy8I GTNNAC 4 cut(s) 46, 817, 972, 1080
HpyAV CCTTC 1 cut(s) 527
HpyCH4III ACNGT 3 cut(s) 96, 291, 377
HpyCH4IV ACGT 2 cut(s) 266, 451
HpyCH4V TGCA 6 cut(s) 46, 233, 248, 397, 437, 626
HpyF10VI GCNNNNNNNGC 5 cut(s) 131, 335, 475, 484, 548
HpyF3I CTNAG 4 cut(s) 102, 210, 554, 1068
HpySE526I ACGT 2 cut(s) 266, 451
Hsp92II CATG 7 cut(s) 81, 401, 525, 626, 701, 949, 1090
HspAI GCGC 1 cut(s) 725
Kpn2I TCCGGA 1 cut(s) 369
KpnI GGTACC 1 cut(s) 870
Kzo9I GATC 2 cut(s) 952, 1094
LguI GCTCTTC 1 cut(s) 532
LmnI GCTCC 3 cut(s) 187, 634, 1064
Lsp1109I GCAGC 4 cut(s) 313, 421, 490, 886
LweI GCATC 2 cut(s) 378, 446
MaeI CTAG 2 cut(s) 350, 576
MaeII ACGT 2 cut(s) 266, 451
MaeIII GTNAC 1 cut(s) 127
MalI GATC 2 cut(s) 954, 1096
MboI GATC 2 cut(s) 952, 1094
MboII GAAGA 2 cut(s) 549, 686
MflI RGATCY 1 cut(s) 952
MhlI GDGCHC 4 cut(s) 48, 544, 937, 1069
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 5 cut(s) 316, 441, 526, 627, 846
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 4 cut(s) 65, 113, 658, 887
MmeI TCCRAC 3 cut(s) 33, 665, 987
Mox20I TGGCCA 1 cut(s) 65
Mph1103I ATGCAT 1 cut(s) 235
MroI TCCGGA 1 cut(s) 369
MroXI GAANNNNTTC 2 cut(s) 850, 1014
MscI TGGCCA 1 cut(s) 65
MseI TTAA 3 cut(s) 497, 654, 912
MslI CAYNNNNRTG 2 cut(s) 621, 827
Msp20I TGGCCA 1 cut(s) 65
MspCI CTTAAG 1 cut(s) 496
MspI CCGG 1 cut(s) 370
MspR9I CCNGG 3 cut(s) 471, 489, 976
Mva1269I GAATGC 2 cut(s) 577, 834
MvaI CCWGG 3 cut(s) 471, 489, 976
MwoI GCNNNNNNNGC 5 cut(s) 131, 335, 475, 484, 548
NdeII GATC 2 cut(s) 952, 1094
NlaIII CATG 7 cut(s) 81, 401, 525, 626, 701, 949, 1090
NlaIV GGNNCC 3 cut(s) 636, 868, 1011
NsiI ATGCAT 1 cut(s) 235
NspI RCATGY 2 cut(s) 626, 1090
NspV TTCGAA 1 cut(s) 766
PaeI GCATGC 1 cut(s) 626
PagI TCATGA 1 cut(s) 945
PciI ACATGT 1 cut(s) 1086
PciSI GCTCTTC 1 cut(s) 532
PctI GAATGC 2 cut(s) 577, 834
PdmI GAANNNNTTC 2 cut(s) 850, 1014
PfeI GAWTC 2 cut(s) 72, 790
PkrI GCNGC 4 cut(s) 328, 436, 480, 876
PleI GAGTC 4 cut(s) 64, 112, 658, 887
PpsI GAGTC 4 cut(s) 64, 112, 658, 887
PscI ACATGT 1 cut(s) 1086
PsiI TTATAA 1 cut(s) 734
Psp124BI GAGCTC 1 cut(s) 1069
Psp1406I AACGTT 1 cut(s) 266
Psp6I CCWGG 3 cut(s) 469, 487, 974
PspGI CCWGG 3 cut(s) 469, 487, 974
PspN4I GGNNCC 3 cut(s) 636, 868, 1011
PspPI GGNCC 2 cut(s) 116, 485
PstNI CAGNNNCTG 1 cut(s) 131
PsuI RGATCY 1 cut(s) 952
RsaI GTAC 2 cut(s) 494, 868
RsaNI GTAC 2 cut(s) 493, 867
RseI CAYNNNNRTG 2 cut(s) 621, 827
SacI GAGCTC 1 cut(s) 1069
SapI GCTCTTC 1 cut(s) 532
SaqAI TTAA 3 cut(s) 497, 654, 912
SatI GCNGC 4 cut(s) 327, 435, 479, 875
Sau3AI GATC 2 cut(s) 952, 1094
Sau96I GGNCC 2 cut(s) 116, 485
SchI GAGTC 4 cut(s) 65, 113, 658, 887
ScrFI CCNGG 3 cut(s) 471, 489, 976
SduI GDGCHC 4 cut(s) 48, 544, 937, 1069
SfaNI GCATC 2 cut(s) 378, 446
SfuI TTCGAA 1 cut(s) 766
SinI GGWCC 1 cut(s) 116
SmiMI CAYNNNNRTG 2 cut(s) 621, 827
SmlI CTYRAG 1 cut(s) 496
SmoI CTYRAG 1 cut(s) 496
SphI GCATGC 1 cut(s) 626
Sse9I AATT 5 cut(s) 316, 441, 526, 627, 846
SsiI CCGC 1 cut(s) 549
SspMI CTAG 2 cut(s) 350, 576
SstI GAGCTC 1 cut(s) 1069
StyD4I CCNGG 3 cut(s) 469, 487, 974
StyI CCWWGG 1 cut(s) 794
TaaI ACNGT 3 cut(s) 96, 291, 377
TaiI ACGT 2 cut(s) 269, 454
TaqI TCGA 3 cut(s) 174, 766, 1050
TasI AATT 5 cut(s) 316, 441, 526, 627, 846
TfiI GAWTC 2 cut(s) 72, 790
Tru1I TTAA 3 cut(s) 497, 654, 912
Tru9I TTAA 3 cut(s) 497, 654, 912
TscAI CASTG 4 cut(s) 382, 558, 654, 829
TseI GCWGC 4 cut(s) 326, 434, 478, 874
TspDTI ATGAA 6 cut(s) 177, 209, 310, 435, 686, 872
TspRI CASTG 4 cut(s) 382, 558, 654, 829
Vha464I CTTAAG 1 cut(s) 496
VneI GTGCAC 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 116
XapI RAATTY 2 cut(s) 316, 526
XceI RCATGY 2 cut(s) 626, 1090
XmiI GTMKAC 2 cut(s) 971, 1079
XmnI GAANNNNTTC 2 cut(s) 850, 1014
XspI CTAG 2 cut(s) 350, 576
Zsp2I ATGCAT 1 cut(s) 235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.