Peroxisome biogenesis protein 16-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45690 |
| fragaria_vesca | FvH4_7g12840 FvH4_7g12840 FvH4_7g12840 FvH4_7g12840 FvH4_7g12840 FvH4_7g12840 FvH4_7g12840 |
| malus_domestica | MD02G1195700.v1.1 MD02G1195800.v1.1 |
| prunus_persica | Prupe.2G152800_v2.0.a1 Prupe.2G152800_v2.0.a1 Prupe.2G152800_v2.0.a1 Prupe.2G152800_v2.0.a1 Prupe.2G152800_v2.0.a1 |
| pyrus_communis | pycom02g15960 pycom07g11860 |
| rosa_chinensis | RchiOBHm_Chr1g0351871 RchiOBHm_Chr1g0351921 |
| rosa_laevigata | RLG00000028375 |
| rosa_multiflora | Rmu_co8139044.1_g000001 Rmu_sc0007728.1_g000004 Rmu_sc0031674.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00303450 |
| rosa_rugosa | Rorug01G0222500 Rorug01G0222800 |
| rosa_samantha | Rh1AG236700 Rh1BG207000 Rh1CG221200 Rh1DG234100 |
| rosa_wichuraiana | Rw1G020600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 734 |
| Acc65I | GGTACC | 1 cut(s) | 866 |
| AccB1I | GGYRCC | 1 cut(s) | 866 |
| AccI | GTMKAC | 2 cut(s) | 971, 1079 |
| AccIII | TCCGGA | 1 cut(s) | 369 |
| AciI | CCGC | 1 cut(s) | 549 |
| AclI | AACGTT | 1 cut(s) | 266 |
| AclWI | GGATC | 1 cut(s) | 947 |
| AcoI | YGGCCR | 1 cut(s) | 63 |
| AcsI | RAATTY | 2 cut(s) | 316, 526 |
| AfaI | GTAC | 2 cut(s) | 494, 868 |
| AfeI | AGCGCT | 1 cut(s) | 726 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1025 |
| AflII | CTTAAG | 1 cut(s) | 496 |
| AflIII | ACRYGT | 1 cut(s) | 1086 |
| AgsI | TTSAA | 3 cut(s) | 275, 614, 989 |
| AjnI | CCWGG | 3 cut(s) | 469, 487, 974 |
| AluBI | AGCT | 4 cut(s) | 182, 481, 1054, 1067 |
| AluI | AGCT | 4 cut(s) | 182, 481, 1054, 1067 |
| Alw21I | GWGCWC | 3 cut(s) | 48, 544, 1069 |
| Alw26I | GTCTC | 2 cut(s) | 63, 401 |
| Alw44I | GTGCAC | 1 cut(s) | 44 |
| AlwI | GGATC | 1 cut(s) | 947 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 131 |
| Aor13HI | TCCGGA | 1 cut(s) | 369 |
| Aor51HI | AGCGCT | 1 cut(s) | 726 |
| AoxI | GGCC | 3 cut(s) | 63, 485, 659 |
| ApaLI | GTGCAC | 1 cut(s) | 44 |
| ApeKI | GCWGC | 4 cut(s) | 326, 434, 478, 874 |
| ApoI | RAATTY | 2 cut(s) | 316, 526 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 850, 1014 |
| Asp718I | GGTACC | 1 cut(s) | 866 |
| AspLEI | GCGC | 1 cut(s) | 727 |
| AspS9I | GGNCC | 2 cut(s) | 116, 485 |
| AsuHPI | GGTGA | 1 cut(s) | 311 |
| AsuII | TTCGAA | 1 cut(s) | 766 |
| AvaII | GGWCC | 1 cut(s) | 116 |
| BaeGI | GKGCMC | 2 cut(s) | 48, 937 |
| BalI | TGGCCA | 1 cut(s) | 65 |
| BanI | GGYRCC | 1 cut(s) | 866 |
| BanII | GRGCYC | 1 cut(s) | 1069 |
| BauI | CACGAG | 1 cut(s) | 784 |
| BbsI | GAAGAC | 1 cut(s) | 686 |
| Bbv12I | GWGCWC | 3 cut(s) | 48, 544, 1069 |
| BbvI | GCAGC | 4 cut(s) | 313, 421, 490, 886 |
| BccI | CCATC | 2 cut(s) | 574, 823 |
| BciT130I | CCWGG | 3 cut(s) | 471, 489, 976 |
| BcoDI | GTCTC | 2 cut(s) | 63, 401 |
| BfaI | CTAG | 2 cut(s) | 350, 576 |
| BfoI | RGCGCY | 1 cut(s) | 728 |
| BfrI | CTTAAG | 1 cut(s) | 496 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 475 |
| BisI | GCNGC | 4 cut(s) | 327, 435, 479, 875 |
| BlsI | GCNGC | 4 cut(s) | 328, 436, 480, 876 |
| Bme1390I | CCNGG | 3 cut(s) | 471, 489, 976 |
| Bme18I | GGWCC | 1 cut(s) | 116 |
| BmgT120I | GGNCC | 2 cut(s) | 116, 485 |
| BmiI | GGNNCC | 3 cut(s) | 636, 868, 1011 |
| BmrFI | CCNGG | 3 cut(s) | 471, 489, 976 |
| BmrI | ACTGGG | 1 cut(s) | 834 |
| BmsI | GCATC | 2 cut(s) | 378, 446 |
| BmuI | ACTGGG | 1 cut(s) | 834 |
| BpiI | GAAGAC | 1 cut(s) | 686 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 649, 681 |
| BpmI | CTGGAG | 2 cut(s) | 492, 630 |
| Bpu14I | TTCGAA | 1 cut(s) | 766 |
| BsaJI | CCNNGG | 2 cut(s) | 488, 794 |
| BsaWI | WCCGGW | 1 cut(s) | 369 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 169, 199 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1025 |
| Bse1I | ACTGG | 3 cut(s) | 593, 647, 829 |
| Bse3DI | GCAATG | 1 cut(s) | 321 |
| BseAI | TCCGGA | 1 cut(s) | 369 |
| BseBI | CCWGG | 3 cut(s) | 471, 489, 976 |
| BseDI | CCNNGG | 2 cut(s) | 488, 794 |
| BseGI | GGATG | 2 cut(s) | 585, 834 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1025 |
| BseMI | GCAATG | 1 cut(s) | 321 |
| BseMII | CTCAG | 4 cut(s) | 93, 201, 545, 1082 |
| BseNI | ACTGG | 3 cut(s) | 593, 647, 829 |
| BseRI | GAGGAG | 3 cut(s) | 174, 177, 417 |
| BseSI | GKGCMC | 2 cut(s) | 48, 937 |
| BseXI | GCAGC | 4 cut(s) | 313, 421, 490, 886 |
| BsgI | GTGCAG | 1 cut(s) | 231 |
| BshFI | GGCC | 3 cut(s) | 65, 487, 661 |
| BshNI | GGYRCC | 1 cut(s) | 866 |
| BsiHKAI | GWGCWC | 3 cut(s) | 48, 544, 1069 |
| BsiSI | CCGG | 1 cut(s) | 370 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1025 |
| BsmAI | GTCTC | 2 cut(s) | 63, 401 |
| BsmI | GAATGC | 2 cut(s) | 577, 834 |
| BsnI | GGCC | 3 cut(s) | 65, 487, 661 |
| Bsp119I | TTCGAA | 1 cut(s) | 766 |
| Bsp1286I | GDGCHC | 4 cut(s) | 48, 544, 937, 1069 |
| Bsp13I | TCCGGA | 1 cut(s) | 369 |
| Bsp143I | GATC | 2 cut(s) | 952, 1094 |
| BspACI | CCGC | 1 cut(s) | 549 |
| BspANI | GGCC | 3 cut(s) | 65, 487, 661 |
| BspCNI | CTCAG | 4 cut(s) | 94, 202, 546, 1081 |
| BspEI | TCCGGA | 1 cut(s) | 369 |
| BspHI | TCATGA | 1 cut(s) | 945 |
| BspLI | GGNNCC | 3 cut(s) | 636, 868, 1011 |
| BspPI | GGATC | 1 cut(s) | 947 |
| BspQI | GCTCTTC | 1 cut(s) | 532 |
| BspT104I | TTCGAA | 1 cut(s) | 766 |
| BspT107I | GGYRCC | 1 cut(s) | 866 |
| BspTI | CTTAAG | 1 cut(s) | 496 |
| BsrDI | GCAATG | 1 cut(s) | 321 |
| BsrI | ACTGG | 3 cut(s) | 593, 647, 829 |
| BssECI | CCNNGG | 2 cut(s) | 488, 794 |
| BssMI | GATC | 2 cut(s) | 952, 1094 |
| BssNAI | GTATAC | 2 cut(s) | 972, 1080 |
| BssSI | CACGAG | 1 cut(s) | 784 |
| BssT1I | CCWWGG | 1 cut(s) | 794 |
| Bst1107I | GTATAC | 2 cut(s) | 972, 1080 |
| Bst2BI | CACGAG | 1 cut(s) | 784 |
| Bst2UI | CCWGG | 3 cut(s) | 471, 489, 976 |
| Bst4CI | ACNGT | 3 cut(s) | 96, 291, 377 |
| Bst6I | CTCTTC | 1 cut(s) | 532 |
| BstAFI | CTTAAG | 1 cut(s) | 496 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 131 |
| BstBI | TTCGAA | 1 cut(s) | 766 |
| BstC8I | GCNNGC | 2 cut(s) | 624, 810 |
| BstDEI | CTNAG | 4 cut(s) | 102, 210, 554, 1068 |
| BstF5I | GGATG | 2 cut(s) | 585, 834 |
| BstH2I | RGCGCY | 1 cut(s) | 728 |
| BstHHI | GCGC | 1 cut(s) | 727 |
| BstKTI | GATC | 2 cut(s) | 955, 1097 |
| BstMAI | GTCTC | 2 cut(s) | 63, 401 |
| BstMBI | GATC | 2 cut(s) | 952, 1094 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 131, 335, 475, 484, 548 |
| BstNI | CCWGG | 3 cut(s) | 471, 489, 976 |
| BstNSI | RCATGY | 2 cut(s) | 626, 1090 |
| BstSCI | CCNGG | 3 cut(s) | 469, 487, 974 |
| BstSLI | GKGCMC | 2 cut(s) | 48, 937 |
| BstV1I | GCAGC | 4 cut(s) | 313, 421, 490, 886 |
| BstV2I | GAAGAC | 1 cut(s) | 686 |
| BstX2I | RGATCY | 1 cut(s) | 952 |
| BstYI | RGATCY | 1 cut(s) | 952 |
| BstZ17I | GTATAC | 2 cut(s) | 972, 1080 |
| BsuRI | GGCC | 3 cut(s) | 65, 487, 661 |
| BtsCI | GGATG | 2 cut(s) | 585, 834 |
| BtsIMutI | CAGTG | 4 cut(s) | 382, 551, 654, 822 |
| Cac8I | GCNNGC | 2 cut(s) | 624, 810 |
| CaiI | CAGNNNCTG | 1 cut(s) | 131 |
| CciI | TCATGA | 1 cut(s) | 945 |
| CfoI | GCGC | 1 cut(s) | 727 |
| Cfr13I | GGNCC | 2 cut(s) | 116, 485 |
| CseI | GACGC | 1 cut(s) | 527 |
| Csp6I | GTAC | 2 cut(s) | 493, 867 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 630, 665 |
| CviAII | CATG | 7 cut(s) | 78, 398, 522, 623, 698, 946, 1087 |
| CviQI | GTAC | 2 cut(s) | 493, 867 |
| DdeI | CTNAG | 4 cut(s) | 102, 210, 554, 1068 |
| DpnI | GATC | 2 cut(s) | 954, 1096 |
| DpnII | GATC | 2 cut(s) | 952, 1094 |
| EaeI | YGGCCR | 1 cut(s) | 63 |
| Eam1104I | CTCTTC | 1 cut(s) | 532 |
| EarI | CTCTTC | 1 cut(s) | 532 |
| Ecl136II | GAGCTC | 1 cut(s) | 1067 |
| Eco130I | CCWWGG | 1 cut(s) | 794 |
| Eco24I | GRGCYC | 1 cut(s) | 1069 |
| Eco47I | GGWCC | 1 cut(s) | 116 |
| Eco47III | AGCGCT | 1 cut(s) | 726 |
| Eco53kI | GAGCTC | 1 cut(s) | 1067 |
| EcoICRI | GAGCTC | 1 cut(s) | 1067 |
| EcoRII | CCWGG | 3 cut(s) | 469, 487, 974 |
| EcoT14I | CCWWGG | 1 cut(s) | 794 |
| EcoT22I | ATGCAT | 1 cut(s) | 235 |
| EcoT38I | GRGCYC | 1 cut(s) | 1069 |
| ErhI | CCWWGG | 1 cut(s) | 794 |
| FaeI | CATG | 7 cut(s) | 81, 401, 525, 626, 701, 949, 1090 |
| FatI | CATG | 7 cut(s) | 77, 397, 521, 622, 697, 945, 1086 |
| FblI | GTMKAC | 2 cut(s) | 971, 1079 |
| Fnu4HI | GCNGC | 4 cut(s) | 327, 435, 479, 875 |
| FokI | GGATG | 2 cut(s) | 592, 841 |
| FriOI | GRGCYC | 1 cut(s) | 1069 |
| Fsp4HI | GCNGC | 4 cut(s) | 327, 435, 479, 875 |
| FspBI | CTAG | 2 cut(s) | 350, 576 |
| GlaI | GCGC | 1 cut(s) | 726 |
| GluI | GCNGC | 4 cut(s) | 327, 435, 479, 875 |
| GsuI | CTGGAG | 2 cut(s) | 492, 630 |
| HaeII | RGCGCY | 1 cut(s) | 728 |
| HaeIII | GGCC | 3 cut(s) | 65, 487, 661 |
| HapII | CCGG | 1 cut(s) | 370 |
| HgaI | GACGC | 1 cut(s) | 527 |
| HhaI | GCGC | 1 cut(s) | 727 |
| Hin1II | CATG | 7 cut(s) | 81, 401, 525, 626, 701, 949, 1090 |
| Hin6I | GCGC | 1 cut(s) | 725 |
| HinP1I | GCGC | 1 cut(s) | 725 |
| HinfI | GANTC | 6 cut(s) | 56, 72, 104, 664, 790, 893 |
| HpaII | CCGG | 1 cut(s) | 370 |
| HphI | GGTGA | 1 cut(s) | 311 |
| Hpy166II | GTNNAC | 4 cut(s) | 46, 817, 972, 1080 |
| Hpy188I | TCNGA | 6 cut(s) | 103, 109, 589, 892, 898, 1071 |
| Hpy188III | TCNNGA | 4 cut(s) | 370, 843, 946, 1092 |
| Hpy8I | GTNNAC | 4 cut(s) | 46, 817, 972, 1080 |
| HpyAV | CCTTC | 1 cut(s) | 527 |
| HpyCH4III | ACNGT | 3 cut(s) | 96, 291, 377 |
| HpyCH4IV | ACGT | 2 cut(s) | 266, 451 |
| HpyCH4V | TGCA | 6 cut(s) | 46, 233, 248, 397, 437, 626 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 131, 335, 475, 484, 548 |
| HpyF3I | CTNAG | 4 cut(s) | 102, 210, 554, 1068 |
| HpySE526I | ACGT | 2 cut(s) | 266, 451 |
| Hsp92II | CATG | 7 cut(s) | 81, 401, 525, 626, 701, 949, 1090 |
| HspAI | GCGC | 1 cut(s) | 725 |
| Kpn2I | TCCGGA | 1 cut(s) | 369 |
| KpnI | GGTACC | 1 cut(s) | 870 |
| Kzo9I | GATC | 2 cut(s) | 952, 1094 |
| LguI | GCTCTTC | 1 cut(s) | 532 |
| LmnI | GCTCC | 3 cut(s) | 187, 634, 1064 |
| Lsp1109I | GCAGC | 4 cut(s) | 313, 421, 490, 886 |
| LweI | GCATC | 2 cut(s) | 378, 446 |
| MaeI | CTAG | 2 cut(s) | 350, 576 |
| MaeII | ACGT | 2 cut(s) | 266, 451 |
| MaeIII | GTNAC | 1 cut(s) | 127 |
| MalI | GATC | 2 cut(s) | 954, 1096 |
| MboI | GATC | 2 cut(s) | 952, 1094 |
| MboII | GAAGA | 2 cut(s) | 549, 686 |
| MflI | RGATCY | 1 cut(s) | 952 |
| MhlI | GDGCHC | 4 cut(s) | 48, 544, 937, 1069 |
| MlsI | TGGCCA | 1 cut(s) | 65 |
| MluCI | AATT | 5 cut(s) | 316, 441, 526, 627, 846 |
| MluNI | TGGCCA | 1 cut(s) | 65 |
| MlyI | GAGTC | 4 cut(s) | 65, 113, 658, 887 |
| MmeI | TCCRAC | 3 cut(s) | 33, 665, 987 |
| Mox20I | TGGCCA | 1 cut(s) | 65 |
| Mph1103I | ATGCAT | 1 cut(s) | 235 |
| MroI | TCCGGA | 1 cut(s) | 369 |
| MroXI | GAANNNNTTC | 2 cut(s) | 850, 1014 |
| MscI | TGGCCA | 1 cut(s) | 65 |
| MseI | TTAA | 3 cut(s) | 497, 654, 912 |
| MslI | CAYNNNNRTG | 2 cut(s) | 621, 827 |
| Msp20I | TGGCCA | 1 cut(s) | 65 |
| MspCI | CTTAAG | 1 cut(s) | 496 |
| MspI | CCGG | 1 cut(s) | 370 |
| MspR9I | CCNGG | 3 cut(s) | 471, 489, 976 |
| Mva1269I | GAATGC | 2 cut(s) | 577, 834 |
| MvaI | CCWGG | 3 cut(s) | 471, 489, 976 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 131, 335, 475, 484, 548 |
| NdeII | GATC | 2 cut(s) | 952, 1094 |
| NlaIII | CATG | 7 cut(s) | 81, 401, 525, 626, 701, 949, 1090 |
| NlaIV | GGNNCC | 3 cut(s) | 636, 868, 1011 |
| NsiI | ATGCAT | 1 cut(s) | 235 |
| NspI | RCATGY | 2 cut(s) | 626, 1090 |
| NspV | TTCGAA | 1 cut(s) | 766 |
| PaeI | GCATGC | 1 cut(s) | 626 |
| PagI | TCATGA | 1 cut(s) | 945 |
| PciI | ACATGT | 1 cut(s) | 1086 |
| PciSI | GCTCTTC | 1 cut(s) | 532 |
| PctI | GAATGC | 2 cut(s) | 577, 834 |
| PdmI | GAANNNNTTC | 2 cut(s) | 850, 1014 |
| PfeI | GAWTC | 2 cut(s) | 72, 790 |
| PkrI | GCNGC | 4 cut(s) | 328, 436, 480, 876 |
| PleI | GAGTC | 4 cut(s) | 64, 112, 658, 887 |
| PpsI | GAGTC | 4 cut(s) | 64, 112, 658, 887 |
| PscI | ACATGT | 1 cut(s) | 1086 |
| PsiI | TTATAA | 1 cut(s) | 734 |
| Psp124BI | GAGCTC | 1 cut(s) | 1069 |
| Psp1406I | AACGTT | 1 cut(s) | 266 |
| Psp6I | CCWGG | 3 cut(s) | 469, 487, 974 |
| PspGI | CCWGG | 3 cut(s) | 469, 487, 974 |
| PspN4I | GGNNCC | 3 cut(s) | 636, 868, 1011 |
| PspPI | GGNCC | 2 cut(s) | 116, 485 |
| PstNI | CAGNNNCTG | 1 cut(s) | 131 |
| PsuI | RGATCY | 1 cut(s) | 952 |
| RsaI | GTAC | 2 cut(s) | 494, 868 |
| RsaNI | GTAC | 2 cut(s) | 493, 867 |
| RseI | CAYNNNNRTG | 2 cut(s) | 621, 827 |
| SacI | GAGCTC | 1 cut(s) | 1069 |
| SapI | GCTCTTC | 1 cut(s) | 532 |
| SaqAI | TTAA | 3 cut(s) | 497, 654, 912 |
| SatI | GCNGC | 4 cut(s) | 327, 435, 479, 875 |
| Sau3AI | GATC | 2 cut(s) | 952, 1094 |
| Sau96I | GGNCC | 2 cut(s) | 116, 485 |
| SchI | GAGTC | 4 cut(s) | 65, 113, 658, 887 |
| ScrFI | CCNGG | 3 cut(s) | 471, 489, 976 |
| SduI | GDGCHC | 4 cut(s) | 48, 544, 937, 1069 |
| SfaNI | GCATC | 2 cut(s) | 378, 446 |
| SfuI | TTCGAA | 1 cut(s) | 766 |
| SinI | GGWCC | 1 cut(s) | 116 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 621, 827 |
| SmlI | CTYRAG | 1 cut(s) | 496 |
| SmoI | CTYRAG | 1 cut(s) | 496 |
| SphI | GCATGC | 1 cut(s) | 626 |
| Sse9I | AATT | 5 cut(s) | 316, 441, 526, 627, 846 |
| SsiI | CCGC | 1 cut(s) | 549 |
| SspMI | CTAG | 2 cut(s) | 350, 576 |
| SstI | GAGCTC | 1 cut(s) | 1069 |
| StyD4I | CCNGG | 3 cut(s) | 469, 487, 974 |
| StyI | CCWWGG | 1 cut(s) | 794 |
| TaaI | ACNGT | 3 cut(s) | 96, 291, 377 |
| TaiI | ACGT | 2 cut(s) | 269, 454 |
| TaqI | TCGA | 3 cut(s) | 174, 766, 1050 |
| TasI | AATT | 5 cut(s) | 316, 441, 526, 627, 846 |
| TfiI | GAWTC | 2 cut(s) | 72, 790 |
| Tru1I | TTAA | 3 cut(s) | 497, 654, 912 |
| Tru9I | TTAA | 3 cut(s) | 497, 654, 912 |
| TscAI | CASTG | 4 cut(s) | 382, 558, 654, 829 |
| TseI | GCWGC | 4 cut(s) | 326, 434, 478, 874 |
| TspDTI | ATGAA | 6 cut(s) | 177, 209, 310, 435, 686, 872 |
| TspRI | CASTG | 4 cut(s) | 382, 558, 654, 829 |
| Vha464I | CTTAAG | 1 cut(s) | 496 |
| VneI | GTGCAC | 1 cut(s) | 44 |
| VpaK11BI | GGWCC | 1 cut(s) | 116 |
| XapI | RAATTY | 2 cut(s) | 316, 526 |
| XceI | RCATGY | 2 cut(s) | 626, 1090 |
| XmiI | GTMKAC | 2 cut(s) | 971, 1079 |
| XmnI | GAANNNNTTC | 2 cut(s) | 850, 1014 |
| XspI | CTAG | 2 cut(s) | 350, 576 |
| Zsp2I | ATGCAT | 1 cut(s) | 235 |