Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013949

Physical Location & Seq

Genomic Coordinates Forward (+)

22241673 .. 22243743

Gene Structure 2071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G177400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

ATGGAAGACGATTGGGATCTTCAGGCGGTGGTCAGAGGCTGCTCCACCGGCACAACCACCAGCAACAGAAGCACAGCCACCACCAACAGCAACAACAGCACATGCTTCAAAATCTCGAACTTCCATTCAAGCCCTGCTTTTTCTTCTTCATTTGGAACCGCTACTCTGCAGCCTGGCCTACAGCAACCACAATTCCAAGTGCTTTTCTCTCTTCCAGATCCCATTAAACCCAGAAATGCCATAGAGGACTTGCATGAGCTTTACAAGCCCTTCTTCCCCAAATCTCAGCCTCCCCTCTCCTCGCAAATCACACCACCACCCAATCTCTCTCCTTTGACTTCTCTCACTCCTCTGACTGCACCCAAAGATCAAACACATCCCATTCAACAACATCAACACCAAAACCACTACCAGCAACAACAACAACAACAACAGTCCAAGCCATCATCTCATTCTGTTTCCTCCACCACCACCCCACGATCCAAAAAAAGAAAGAACCAGCTTAAGAAAGTGTGCCAAGTACCAGCTGAGAGCCTCTCTGCAGACATATGGGCATGGCGTAAATATGGCCAAAAACCCATCAAGGGCTCCCCATATCCAAGGGGATATTACAGATGCAGCAGCTCAAAGGGTTGTATGGCCCGAAAACAAGTGGAGCGGAACAGATCCGACCCGAATATGTTCATAGTTACCTACACAGCCGAGCACAACCACCCGGCCCCAACTCATCGCAACTCGCTCGCCGGCTCCACCCGCCAGAAGCCCTTCTCGCCGCAAACCGTCACGGGCAGTGACTCTACCAAACCCACTTCTCCGGCAACCTCGGCGTCCGTCGACGAAGACCCTGTTGTACCTCAGAGTACAACCATGGAAAGCTTCAAAGAAGAAAAGGGCAGTCCTATGGTCGACGACGACGACGACGAGCTCTTTGGGATGTGTGATTCGGTCGTGAGCGACGATTTCTTTGTGGGTTTGGAGGGTCTCGCCGGAGATTACTTTTCCGATCACTCTCCGACGAGCTTTGGCGTCCCCTGGGTTTCTAGTAATGCTGCGACCGCCGCTGGCAGTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0009889 GO:0010033 GO:0010150 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0099402 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

358

Amino Acids

39.2

Weight (kDa)

7.16

Isoelectric Point (pI)

51.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013949)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01250
fragaria_vesca	FvH4_7g15350
malus_domestica	MD01G1071300.v1.1 MD07G1131400.v1.1
prunus_persica	Prupe.2G177400_v2.0.a1
pyrus_communis	pycom01g10030
rosa_chinensis	RchiOBHm_Chr1g0357671
rosa_laevigata	RLG00000028008
rosa_multiflora	Rmu_co8407323.1_g000001 Rmu_ssc0000425.1_g000001
rosa_roxburghii	Rroxscaffold_4G00298610
rosa_rugosa	Rorug01G0257600
rosa_samantha	Rh1AG271600 Rh1BG238700 Rh1CG255500 Rh1DG267100
rosa_wichuraiana	Rw1G024220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	658
AccI	GTMKAC	2 cut(s)	834, 906
AciI	CCGC	7 cut(s)	26, 159, 658, 754, 773, 1056, 1059
AclWI	GGATC	4 cut(s)	24, 212, 474, 660
AcoI	YGGCCR	1 cut(s)	568
AcuI	CTGAAG	1 cut(s)	5
AcyI	GRCGYC	2 cut(s)	827, 1026
AfaI	GTAC	3 cut(s)	522, 852, 862
AfiI	CCNNNNNNNGG	1 cut(s)	584
AflII	CTTAAG	1 cut(s)	503
AgsI	TTSAA	4 cut(s)	109, 129, 386, 880
AjnI	CCWGG	2 cut(s)	172, 1031
AluBI	AGCT	7 cut(s)	259, 502, 527, 624, 876, 925, 1020
AluI	AGCT	7 cut(s)	259, 502, 527, 624, 876, 925, 1020
Alw21I	GWGCWC	2 cut(s)	708, 927
Alw26I	GTCTC	1 cut(s)	986
AlwI	GGATC	4 cut(s)	24, 212, 474, 660
AlwNI	CAGNNNCTG	2 cut(s)	39, 1071
AoxI	GGCC	4 cut(s)	175, 568, 639, 717
ApeKI	GCWGC	5 cut(s)	39, 169, 618, 621, 1049
ArsI	GACNNNNNNTTYG	4 cut(s)	911, 943, 947, 979
Asp700I	GAANNNNTTC	2 cut(s)	680, 764
AspS9I	GGNCC	2 cut(s)	640, 718
AsuC2I	CCSGG	1 cut(s)	716
BalI	TGGCCA	1 cut(s)	570
BanII	GRGCYC	2 cut(s)	590, 927
BbsI	GAAGAC	2 cut(s)	12, 846
Bbv12I	GWGCWC	2 cut(s)	708, 927
BbvI	GCAGC	5 cut(s)	26, 181, 630, 633, 1036
BccI	CCATC	2 cut(s)	451, 587
BcgI	CGANNNNNNTGC	2 cut(s)	721, 755
BciT130I	CCWGG	2 cut(s)	174, 1033
BcnI	CCSGG	1 cut(s)	716
BcoDI	GTCTC	1 cut(s)	986
BfaI	CTAG	1 cut(s)	1041
BfmI	CTRYAG	3 cut(s)	167, 179, 540
BfrI	CTTAAG	1 cut(s)	503
BisI	GCNGC	7 cut(s)	40, 170, 619, 622, 773, 1050, 1059
BlsI	GCNGC	7 cut(s)	41, 171, 620, 623, 774, 1051, 1060
Bme1390I	CCNGG	3 cut(s)	174, 716, 1033
BmgT120I	GGNCC	2 cut(s)	640, 718
BmiI	GGNNCC	4 cut(s)	157, 589, 720, 748
BmrFI	CCNGG	3 cut(s)	174, 716, 1033
BmsI	GCATC	1 cut(s)	605
BpiI	GAAGAC	2 cut(s)	12, 846
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpuMI	CCSGG	1 cut(s)	716
BsaBI	GATNNNNATC	1 cut(s)	15
BsaHI	GRCGYC	2 cut(s)	827, 1026
BsaI	GGTCTC	1 cut(s)	986
BsaJI	CCNNGG	5 cut(s)	599, 822, 867, 1031, 1032
Bsc4I	CCNNNNNNNGG	1 cut(s)	584
Bse118I	RCCGGY	2 cut(s)	47, 743
Bse8I	GATNNNNATC	1 cut(s)	15
BseBI	CCWGG	2 cut(s)	174, 1033
BseDI	CCNNGG	5 cut(s)	599, 822, 867, 1031, 1032
BseGI	GGATG	2 cut(s)	376, 939
BseJI	GATNNNNATC	1 cut(s)	15
BseLI	CCNNNNNNNGG	1 cut(s)	584
BseMII	CTCAG	3 cut(s)	299, 519, 869
BseRI	GAGGAG	2 cut(s)	289, 339
BseXI	GCAGC	5 cut(s)	26, 181, 630, 633, 1036
BsgI	GTGCAG	1 cut(s)	342
Bsh1285I	CGRYCG	2 cut(s)	948, 1056
BshFI	GGCC	4 cut(s)	177, 570, 641, 719
BsiEI	CGRYCG	2 cut(s)	948, 1056
BsiHKAI	GWGCWC	2 cut(s)	708, 927
BsiSI	CCGG	5 cut(s)	48, 716, 744, 815, 987
BslFI	GGGAC	1 cut(s)	1013
BslI	CCNNNNNNNGG	1 cut(s)	584
BsmAI	GTCTC	1 cut(s)	986
BsmFI	GGGAC	1 cut(s)	1013
BsnI	GGCC	4 cut(s)	177, 570, 641, 719
Bso31I	GGTCTC	1 cut(s)	986
Bsp1286I	GDGCHC	3 cut(s)	590, 708, 927
Bsp143I	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
Bsp19I	CCATGG	1 cut(s)	867
BspACI	CCGC	7 cut(s)	26, 159, 658, 754, 773, 1056, 1059
BspANI	GGCC	4 cut(s)	177, 570, 641, 719
BspCNI	CTCAG	3 cut(s)	298, 520, 868
BspLI	GGNNCC	4 cut(s)	157, 589, 720, 748
BspMAI	CTGCAG	2 cut(s)	171, 544
BspPI	GGATC	4 cut(s)	24, 212, 474, 660
BspTI	CTTAAG	1 cut(s)	503
BspTNI	GGTCTC	1 cut(s)	986
BsrBI	CCGCTC	1 cut(s)	658
BsrFI	RCCGGY	2 cut(s)	47, 743
BssAI	RCCGGY	2 cut(s)	47, 743
BssECI	CCNNGG	5 cut(s)	599, 822, 867, 1031, 1032
BssMI	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
BssNI	GRCGYC	2 cut(s)	827, 1026
BssT1I	CCWWGG	2 cut(s)	599, 867
Bst2UI	CCWGG	2 cut(s)	174, 1033
Bst4CI	ACNGT	2 cut(s)	435, 781
Bst6I	CTCTTC	1 cut(s)	216
BstACI	GRCGYC	2 cut(s)	827, 1026
BstAFI	CTTAAG	1 cut(s)	503
BstC8I	GCNNGC	3 cut(s)	741, 745, 1063
BstDEI	CTNAG	3 cut(s)	285, 528, 855
BstDSI	CCRYGG	1 cut(s)	867
BstF5I	GGATG	2 cut(s)	376, 939
BstKTI	GATC	6 cut(s)	19, 220, 370, 482, 668, 1006
BstMAI	GTCTC	1 cut(s)	986
BstMBI	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
BstMCI	CGRYCG	2 cut(s)	948, 1056
BstMWI	GCNNNNNNNGC	9 cut(s)	48, 69, 96, 265, 753, 769, 824, 1055, 1058
BstNI	CCWGG	2 cut(s)	174, 1033
BstNSI	RCATGY	1 cut(s)	105
BstSCI	CCNGG	3 cut(s)	172, 714, 1031
BstSFI	CTRYAG	3 cut(s)	167, 179, 540
BstV1I	GCAGC	5 cut(s)	26, 181, 630, 633, 1036
BstV2I	GAAGAC	2 cut(s)	12, 846
BstX2I	RGATCY	3 cut(s)	16, 217, 665
BstYI	RGATCY	3 cut(s)	16, 217, 665
BsuRI	GGCC	4 cut(s)	177, 570, 641, 719
BtgI	CCRYGG	1 cut(s)	867
BtgZI	GCGATG	1 cut(s)	713
BtsCI	GGATG	2 cut(s)	376, 939
BtsI	GCAGTG	1 cut(s)	796
BtsIMutI	CAGTG	1 cut(s)	796
Cac8I	GCNNGC	3 cut(s)	741, 745, 1063
CaiI	CAGNNNCTG	2 cut(s)	39, 1071
Cfr10I	RCCGGY	2 cut(s)	47, 743
Cfr13I	GGNCC	2 cut(s)	640, 718
CseI	GACGC	2 cut(s)	816, 1015
Csp6I	GTAC	3 cut(s)	521, 851, 861
CviAII	CATG	4 cut(s)	102, 254, 555, 868
CviQI	GTAC	3 cut(s)	521, 851, 861
DdeI	CTNAG	3 cut(s)	285, 528, 855
DpnI	GATC	6 cut(s)	18, 219, 369, 481, 667, 1005
DpnII	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
EaeI	YGGCCR	1 cut(s)	568
Eam1104I	CTCTTC	1 cut(s)	216
EarI	CTCTTC	1 cut(s)	216
Ecl136II	GAGCTC	1 cut(s)	925
Eco130I	CCWWGG	2 cut(s)	599, 867
Eco24I	GRGCYC	2 cut(s)	590, 927
Eco31I	GGTCTC	1 cut(s)	986
Eco53kI	GAGCTC	1 cut(s)	925
Eco57I	CTGAAG	1 cut(s)	5
EcoICRI	GAGCTC	1 cut(s)	925
EcoRII	CCWGG	2 cut(s)	172, 1031
EcoT14I	CCWWGG	2 cut(s)	599, 867
EcoT38I	GRGCYC	2 cut(s)	590, 927
ErhI	CCWWGG	2 cut(s)	599, 867
FaeI	CATG	4 cut(s)	105, 257, 558, 871
FalI	AAGNNNNNCTT	4 cut(s)	121, 153, 257, 289
FaqI	GGGAC	1 cut(s)	1013
FatI	CATG	4 cut(s)	101, 253, 554, 867
FauI	CCCGC	1 cut(s)	761
FauNDI	CATATG	1 cut(s)	548
FblI	GTMKAC	2 cut(s)	834, 906
Fnu4HI	GCNGC	7 cut(s)	40, 170, 619, 622, 773, 1050, 1059
FokI	GGATG	2 cut(s)	363, 946
FriOI	GRGCYC	2 cut(s)	590, 927
Fsp4HI	GCNGC	7 cut(s)	40, 170, 619, 622, 773, 1050, 1059
FspBI	CTAG	1 cut(s)	1041
GluI	GCNGC	7 cut(s)	40, 170, 619, 622, 773, 1050, 1059
HaeIII	GGCC	4 cut(s)	177, 570, 641, 719
HapII	CCGG	5 cut(s)	48, 716, 744, 815, 987
HgaI	GACGC	2 cut(s)	816, 1015
Hin1I	GRCGYC	2 cut(s)	827, 1026
Hin1II	CATG	4 cut(s)	105, 257, 558, 871
HincII	GTYRAC	2 cut(s)	835, 907
HindII	GTYRAC	2 cut(s)	835, 907
HindIII	AAGCTT	1 cut(s)	874
HinfI	GANTC	2 cut(s)	794, 941
HpaII	CCGG	5 cut(s)	48, 716, 744, 815, 987
Hpy166II	GTNNAC	2 cut(s)	835, 907
Hpy188I	TCNGA	7 cut(s)	35, 354, 670, 858, 1003, 1014, 1073
Hpy188III	TCNNGA	3 cut(s)	115, 215, 949
Hpy8I	GTNNAC	2 cut(s)	835, 907
Hpy99I	CGWCG	9 cut(s)	836, 839, 911, 914, 917, 920, 923, 959, 1018
HpyAV	CCTTC	2 cut(s)	280, 775
HpyCH4III	ACNGT	2 cut(s)	435, 781
HpyCH4V	TGCA	5 cut(s)	169, 253, 359, 542, 618
HpyF10VI	GCNNNNNNNGC	9 cut(s)	48, 69, 96, 265, 753, 769, 824, 1055, 1058
HpyF3I	CTNAG	3 cut(s)	285, 528, 855
Hsp92I	GRCGYC	2 cut(s)	827, 1026
Hsp92II	CATG	4 cut(s)	105, 257, 558, 871
KroI	GCCGGC	1 cut(s)	743
KroNI	GCCGGC	1 cut(s)	745
Kzo9I	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
LmnI	GCTCC	4 cut(s)	47, 593, 655, 752
Lsp1109I	GCAGC	5 cut(s)	26, 181, 630, 633, 1036
LweI	GCATC	1 cut(s)	605
MaeI	CTAG	1 cut(s)	1041
MaeIII	GTNAC	3 cut(s)	688, 781, 791
MalI	GATC	6 cut(s)	18, 219, 369, 481, 667, 1005
MbiI	CCGCTC	1 cut(s)	658
MboI	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
MboII	GAAGA	8 cut(s)	11, 17, 135, 138, 203, 265, 851, 896
MflI	RGATCY	3 cut(s)	16, 217, 665
MhlI	GDGCHC	3 cut(s)	590, 708, 927
MlsI	TGGCCA	1 cut(s)	570
MluCI	AATT	1 cut(s)	191
MluNI	TGGCCA	1 cut(s)	570
MlyI	GAGTC	1 cut(s)	788
MmeI	TCCRAC	2 cut(s)	693, 1037
Mox20I	TGGCCA	1 cut(s)	570
MroNI	GCCGGC	1 cut(s)	743
MroXI	GAANNNNTTC	2 cut(s)	680, 764
MscI	TGGCCA	1 cut(s)	570
MseI	TTAA	2 cut(s)	225, 504
Msp20I	TGGCCA	1 cut(s)	570
MspA1I	CMGCKG	2 cut(s)	527, 1061
MspCI	CTTAAG	1 cut(s)	503
MspI	CCGG	5 cut(s)	48, 716, 744, 815, 987
MspR9I	CCNGG	3 cut(s)	174, 716, 1033
MvaI	CCWGG	2 cut(s)	174, 1033
MwoI	GCNNNNNNNGC	9 cut(s)	48, 69, 96, 265, 753, 769, 824, 1055, 1058
NaeI	GCCGGC	1 cut(s)	745
NciI	CCSGG	1 cut(s)	716
NcoI	CCATGG	1 cut(s)	867
NdeI	CATATG	1 cut(s)	548
NdeII	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
NgoMIV	GCCGGC	1 cut(s)	743
NlaIII	CATG	4 cut(s)	105, 257, 558, 871
NlaIV	GGNNCC	4 cut(s)	157, 589, 720, 748
NmeAIII	GCCGAG	2 cut(s)	727, 803
NmuCI	GTSAC	2 cut(s)	781, 791
NspI	RCATGY	1 cut(s)	105
PasI	CCCWGGG	1 cut(s)	1032
PcsI	WCGNNNNNNNCGW	4 cut(s)	912, 915, 918, 954
PdiI	GCCGGC	1 cut(s)	745
PdmI	GAANNNNTTC	2 cut(s)	680, 764
PfeI	GAWTC	1 cut(s)	941
PkrI	GCNGC	7 cut(s)	41, 171, 620, 623, 774, 1051, 1060
PleI	GAGTC	1 cut(s)	788
PpsI	GAGTC	1 cut(s)	788
Psp124BI	GAGCTC	1 cut(s)	927
Psp6I	CCWGG	2 cut(s)	172, 1031
PspGI	CCWGG	2 cut(s)	172, 1031
PspN4I	GGNNCC	4 cut(s)	157, 589, 720, 748
PspPI	GGNCC	2 cut(s)	640, 718
PstI	CTGCAG	2 cut(s)	171, 544
PstNI	CAGNNNCTG	2 cut(s)	39, 1071
PsuI	RGATCY	3 cut(s)	16, 217, 665
PvuII	CAGCTG	1 cut(s)	527
RsaI	GTAC	3 cut(s)	522, 852, 862
RsaNI	GTAC	3 cut(s)	521, 851, 861
SacI	GAGCTC	1 cut(s)	927
SalI	GTCGAC	2 cut(s)	833, 905
SaqAI	TTAA	2 cut(s)	225, 504
SatI	GCNGC	7 cut(s)	40, 170, 619, 622, 773, 1050, 1059
Sau3AI	GATC	6 cut(s)	16, 217, 367, 479, 665, 1003
Sau96I	GGNCC	2 cut(s)	640, 718
SchI	GAGTC	1 cut(s)	788
ScrFI	CCNGG	3 cut(s)	174, 716, 1033
SduI	GDGCHC	3 cut(s)	590, 708, 927
SfaNI	GCATC	1 cut(s)	605
SfcI	CTRYAG	3 cut(s)	167, 179, 540
SgrDI	CGTCGACG	1 cut(s)	833
SmlI	CTYRAG	1 cut(s)	503
SmoI	CTYRAG	1 cut(s)	503
Sse9I	AATT	1 cut(s)	191
SsiI	CCGC	7 cut(s)	26, 159, 658, 754, 773, 1056, 1059
SspMI	CTAG	1 cut(s)	1041
SstI	GAGCTC	1 cut(s)	927
StyD4I	CCNGG	3 cut(s)	172, 714, 1031
StyI	CCWWGG	2 cut(s)	599, 867
TaaI	ACNGT	2 cut(s)	435, 781
TaqI	TCGA	3 cut(s)	116, 834, 906
TaqII	GACCGA	1 cut(s)	934
TasI	AATT	1 cut(s)	191
TatI	WGTACW	1 cut(s)	860
TauI	GCSGC	2 cut(s)	775, 1061
TfiI	GAWTC	1 cut(s)	941
Tru1I	TTAA	2 cut(s)	225, 504
Tru9I	TTAA	2 cut(s)	225, 504
TscAI	CASTG	1 cut(s)	796
TseFI	GTSAC	2 cut(s)	781, 791
TseI	GCWGC	5 cut(s)	39, 169, 618, 621, 1049
Tsp45I	GTSAC	2 cut(s)	781, 791
TspDTI	ATGAA	2 cut(s)	138, 673
TspGWI	ACGGA	1 cut(s)	820
TspRI	CASTG	1 cut(s)	796
Vha464I	CTTAAG	1 cut(s)	503
XceI	RCATGY	1 cut(s)	105
XmiI	GTMKAC	2 cut(s)	834, 906
XmnI	GAANNNNTTC	2 cut(s)	680, 764
XspI	CTAG	1 cut(s)	1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.