Prupe.2G185600_v2.0.a1

Chitinase domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
22665208 .. 22668950
3743 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G185600.2

Sequence Viewer

Length: 1362 bp
ATGTCGTTTTCAGCAACAAACCAACTGAGAAATACTTGTCAGTTTCCTCTCCAGCCAGTAACGACACAAATGGCCAAGAAAAGAGACCGCCGAGTCGCGCCGAGTTCGAACCGCGGCAAAGACCGAGTTGAATCGTCGGATCAATCCTCAGACCCAAAGCTCACAATCACCTTGGTCCTCTCCTTCTGCGTAGCTGCAGCAGCCGCTGTGCTCGCGTACCGCATCAAATATGCTCATCCGATCACGAACCGTGCGCAGTCTTACGTGCACCAGCGAGGCCTCGTTAAGATTGATGTGAATTACCAAGAGATCCTCACTGCAAGTACCACACTGGAAAATGCGAAGGTCTCAGAAAATACTTCTGGCAGGCACTATAAGTACCCTGTATTGGCCTACATCACTCCATGGAATTCCAAGGGCTATGATATGGCGAAAAGGTTCAACTCGAAGTTTACACATTTATCTCCCGTATGGTATGATCTAAAGAGTCAAGGGACAGGCTTAATTCTGGAAGGTAGGCATAATGCTGATATGGGATGGATCTCAGAGCTTAGAATGGCAGGAGATGTTTGGGTATTGCCTAGAGTTGTTCTGGAAGCATTTCCAGCCGAGCTGCTGACAAAGAAGAAGCAGAGGAGTAAAGCTATTACTCTTCTAGTAAATGAGTGCAAGGAAATGGGATATGATGGTATCGTGCTGGAATCTTGGTCAAGGTGGGCAGCTTACAGGATTTTGCATGATCCAAGCATGAGGAATTTGGCATTGCAGTTTATAAAAGAGCTTGGAGATGCACTGCATGCTGTGAGCTTAGAGAGGAATGATAAGCAACGGTTGCAGTTGGTTTATGTTATAGGTCCACCACATTCAGAGAAGCTCCAAGAGCACGATTTTGGACCTAAAGATCTTCGGAGCTTGGGTGATGCTGTGGATGGATTTTCACTGATGATGTATGACTTCTCGGGGCCTCAAAATCCAGGTCCCAATGCACCTCTGAAGTGGATTCATTCAACCCTGCAGCTGCTCCTTGGTACTGATAAAAACAGTGCTCTGGCCCACAAGATATTTCTTGGCATCAATTTCTATGGGAATGATTTTGCCCTCTCCGGAGGTCCAGGTGGTGGTGCTGTCACTGGAAGGGATTACCTGTCCTTGTTGGAGAAGCACGGGCCTGTGATGCGATGGGAAAAAAAGAGTGCAGAACATTTGTTCTTTTACTCTGATGATGAATATAACAACCACGCTGTGTTCTATCCATCCCTGATGTCAATTTCCATGCGGCTAGAGGAAGCTCATAAATGGGGATGTGGAGTCTCGATATGGGAAATTGGGCAAGGTCTGGATTACTTTTTTGATCTTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

454

Amino Acids

51.11

Weight (kDa)

8.76

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012160)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 773
AasI GACNNNNNNGTC 1 cut(s) 92
Acc16I TGCGCA 1 cut(s) 255
AccB7I CCANNNNNTGG 1 cut(s) 1118
AccII CGCG 3 cut(s) 98, 114, 215
AccIII TCCGGA 1 cut(s) 1103
AciI CCGC 6 cut(s) 88, 112, 114, 204, 220, 1276
AclWI GGATC 4 cut(s) 147, 304, 548, 734
AcoI YGGCCR 1 cut(s) 72
AcsI RAATTY 2 cut(s) 409, 754
AcuI CTGAAG 1 cut(s) 1013
AdeI CACNNNGTG 1 cut(s) 1243
AfaI GTAC 4 cut(s) 218, 325, 380, 1030
AfiI CCNNNNNNNGG 2 cut(s) 388, 1118
AgsI TTSAA 3 cut(s) 131, 442, 1008
AjnI CCWGG 2 cut(s) 973, 1111
Alw21I GWGCWC 4 cut(s) 213, 270, 885, 1048
Alw26I GTCTC 3 cut(s) 78, 352, 1315
Alw44I GTGCAC 1 cut(s) 266
AlwI GGATC 4 cut(s) 147, 304, 548, 734
AlwNI CAGNNNCTG 1 cut(s) 206
Ama87I CYCGRG 1 cut(s) 958
Aor13HI TCCGGA 1 cut(s) 1103
AoxI GGCC 6 cut(s) 72, 277, 390, 962, 1050, 1166
ApaLI GTGCAC 1 cut(s) 266
ApeKI GCWGC 7 cut(s) 194, 197, 200, 613, 719, 1015, 1018
ApoI RAATTY 2 cut(s) 409, 754
ArsI GACNNNNNNTTYG 2 cut(s) 961, 993
Asp700I GAANNNNTTC 2 cut(s) 437, 600
AspLEI GCGC 2 cut(s) 100, 256
AspS9I GGNCC 8 cut(s) 175, 854, 893, 962, 977, 1051, 1109, 1166
AsuHPI GGTGA 2 cut(s) 160, 929
AsuII TTCGAA 1 cut(s) 107
AvaI CYCGRG 1 cut(s) 958
AvaII GGWCC 5 cut(s) 175, 854, 893, 977, 1109
BaeGI GKGCMC 1 cut(s) 270
BalI TGGCCA 1 cut(s) 74
Bbv12I GWGCWC 4 cut(s) 213, 270, 885, 1048
BbvI GCAGC 7 cut(s) 181, 209, 212, 600, 731, 1005, 1027
BccI CCATC 5 cut(s) 531, 680, 923, 1173, 1261
BciT130I CCWGG 2 cut(s) 975, 1113
BcoDI GTCTC 3 cut(s) 78, 352, 1315
BfaI CTAG 3 cut(s) 582, 656, 1280
BfmI CTRYAG 2 cut(s) 195, 1013
BglII AGATCT 1 cut(s) 901
Bme1390I CCNGG 2 cut(s) 975, 1113
Bme18I GGWCC 5 cut(s) 175, 854, 893, 977, 1109
BmeT110I CYCGRG 1 cut(s) 958
BmgT120I GGNCC 8 cut(s) 175, 854, 893, 962, 977, 1051, 1109, 1166
BmiI GGNNCC 2 cut(s) 963, 979
BmrFI CCNGG 2 cut(s) 975, 1113
BmsI GCATC 5 cut(s) 231, 778, 910, 1080, 1164
BpmI CTGGAG 1 cut(s) 35
Bpu14I TTCGAA 1 cut(s) 107
BsaAI YACGTR 1 cut(s) 265
BsaI GGTCTC 2 cut(s) 78, 352
BsaJI CCNNGG 5 cut(s) 112, 171, 404, 414, 1024
BsaWI WCCGGW 1 cut(s) 1103
BsaXI ACNNNNNCTCC 2 cut(s) 901, 931
Bsc4I CCNNNNNNNGG 2 cut(s) 388, 1118
Bse1I ACTGG 3 cut(s) 56, 336, 1135
Bse3DI GCAATG 1 cut(s) 761
BseAI TCCGGA 1 cut(s) 1103
BseBI CCWGG 2 cut(s) 975, 1113
BseDI CCNNGG 5 cut(s) 112, 171, 404, 414, 1024
BseGI GGATG 5 cut(s) 235, 542, 934, 1253, 1307
BseLI CCNNNNNNNGG 2 cut(s) 388, 1118
BseMI GCAATG 1 cut(s) 761
BseMII CTCAG 4 cut(s) 17, 162, 363, 558
BseNI ACTGG 3 cut(s) 56, 336, 1135
BseRI GAGGAG 1 cut(s) 649
BseSI GKGCMC 1 cut(s) 270
BseXI GCAGC 7 cut(s) 181, 209, 212, 600, 731, 1005, 1027
BsgI GTGCAG 1 cut(s) 1215
Bsh1236I CGCG 3 cut(s) 98, 114, 215
BshFI GGCC 6 cut(s) 74, 279, 392, 964, 1052, 1168
BsiHKAI GWGCWC 4 cut(s) 213, 270, 885, 1048
BsiHKCI CYCGRG 1 cut(s) 958
BsiSI CCGG 1 cut(s) 1104
BslFI GGGAC 2 cut(s) 508, 963
BslI CCNNNNNNNGG 2 cut(s) 388, 1118
BsmAI GTCTC 3 cut(s) 78, 352, 1315
BsmFI GGGAC 2 cut(s) 508, 963
BsnI GGCC 6 cut(s) 74, 279, 392, 964, 1052, 1168
Bso31I GGTCTC 2 cut(s) 78, 352
BsoBI CYCGRG 1 cut(s) 958
Bsp119I TTCGAA 1 cut(s) 107
Bsp1286I GDGCHC 4 cut(s) 213, 270, 885, 1048
Bsp13I TCCGGA 1 cut(s) 1103
Bsp143I GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
Bsp19I CCATGG 1 cut(s) 404
BspACI CCGC 6 cut(s) 88, 112, 114, 204, 220, 1276
BspANI GGCC 6 cut(s) 74, 279, 392, 964, 1052, 1168
BspCNI CTCAG 4 cut(s) 18, 161, 362, 557
BspEI TCCGGA 1 cut(s) 1103
BspFNI CGCG 3 cut(s) 98, 114, 215
BspLI GGNNCC 2 cut(s) 963, 979
BspMAI CTGCAG 2 cut(s) 199, 1017
BspPI GGATC 4 cut(s) 147, 304, 548, 734
BspT104I TTCGAA 1 cut(s) 107
BspTNI GGTCTC 2 cut(s) 78, 352
BsrDI GCAATG 1 cut(s) 761
BsrI ACTGG 3 cut(s) 56, 336, 1135
BssECI CCNNGG 5 cut(s) 112, 171, 404, 414, 1024
BssMI GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
BssT1I CCWWGG 4 cut(s) 171, 404, 414, 1024
Bst2UI CCWGG 2 cut(s) 975, 1113
Bst4CI ACNGT 3 cut(s) 251, 831, 1043
Bst6I CTCTTC 1 cut(s) 657
BstAPI GCANNNNNTGC 2 cut(s) 797, 832
BstBAI YACGTR 1 cut(s) 265
BstBI TTCGAA 1 cut(s) 107
BstC8I GCNNGC 3 cut(s) 213, 368, 798
BstDEI CTNAG 6 cut(s) 26, 148, 349, 544, 551, 808
BstDSI CCRYGG 2 cut(s) 112, 404
BstF5I GGATG 5 cut(s) 235, 542, 934, 1253, 1307
BstFNI CGCG 3 cut(s) 98, 114, 215
BstHHI GCGC 2 cut(s) 100, 256
BstKTI GATC 8 cut(s) 142, 243, 312, 481, 543, 742, 904, 1354
BstMAI GTCTC 3 cut(s) 78, 352, 1315
BstMBI GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
BstMWI GCNNNNNNNGC 8 cut(s) 200, 203, 212, 605, 797, 832, 880, 1174
BstNI CCWGG 2 cut(s) 975, 1113
BstNSI RCATGY 1 cut(s) 800
BstSCI CCNGG 2 cut(s) 973, 1111
BstSFI CTRYAG 2 cut(s) 195, 1013
BstSLI GKGCMC 1 cut(s) 270
BstUI CGCG 3 cut(s) 98, 114, 215
BstV1I GCAGC 7 cut(s) 181, 209, 212, 600, 731, 1005, 1027
BstX2I RGATCY 3 cut(s) 309, 540, 901
BstYI RGATCY 3 cut(s) 309, 540, 901
BsuRI GGCC 6 cut(s) 74, 279, 392, 964, 1052, 1168
BtgI CCRYGG 2 cut(s) 112, 404
BtgZI GCGATG 1 cut(s) 1192
BtsCI GGATG 5 cut(s) 235, 542, 934, 1253, 1307
BtsI GCAGTG 2 cut(s) 315, 791
BtsIMutI CAGTG 6 cut(s) 315, 329, 791, 938, 1048, 1128
Cac8I GCNNGC 3 cut(s) 213, 368, 798
CaiI CAGNNNCTG 1 cut(s) 206
CfoI GCGC 2 cut(s) 100, 256
Cfr13I GGNCC 8 cut(s) 175, 854, 893, 962, 977, 1051, 1109, 1166
Cfr42I CCGCGG 1 cut(s) 115
Csp6I GTAC 4 cut(s) 217, 324, 379, 1029
CviAII CATG 5 cut(s) 405, 737, 748, 797, 1273
CviQI GTAC 4 cut(s) 217, 324, 379, 1029
DdeI CTNAG 6 cut(s) 26, 148, 349, 544, 551, 808
DpnI GATC 8 cut(s) 141, 242, 311, 480, 542, 741, 903, 1353
DpnII GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
DraIII CACNNNGTG 1 cut(s) 1243
DrdI GACNNNNNNGTC 1 cut(s) 92
DseDI GACNNNNNNGTC 1 cut(s) 92
EaeI YGGCCR 1 cut(s) 72
Eam1104I CTCTTC 1 cut(s) 657
EarI CTCTTC 1 cut(s) 657
Eco130I CCWWGG 4 cut(s) 171, 404, 414, 1024
Eco147I AGGCCT 1 cut(s) 279
Eco31I GGTCTC 2 cut(s) 78, 352
Eco47I GGWCC 5 cut(s) 175, 854, 893, 977, 1109
Eco57I CTGAAG 1 cut(s) 1013
Eco88I CYCGRG 1 cut(s) 958
EcoO109I RGGNCCY 2 cut(s) 962, 977
EcoRI GAATTC 1 cut(s) 409
EcoRII CCWGG 2 cut(s) 973, 1111
EcoT14I CCWWGG 4 cut(s) 171, 404, 414, 1024
ErhI CCWWGG 4 cut(s) 171, 404, 414, 1024
FaeI CATG 5 cut(s) 408, 740, 751, 800, 1276
FaqI GGGAC 2 cut(s) 508, 963
FatI CATG 5 cut(s) 404, 736, 747, 796, 1272
FokI GGATG 5 cut(s) 222, 549, 941, 1240, 1314
FspBI CTAG 3 cut(s) 582, 656, 1280
FspI TGCGCA 1 cut(s) 255
GlaI GCGC 2 cut(s) 99, 255
GsuI CTGGAG 1 cut(s) 35
HaeIII GGCC 6 cut(s) 74, 279, 392, 964, 1052, 1168
HapII CCGG 1 cut(s) 1104
HhaI GCGC 2 cut(s) 100, 256
Hin1II CATG 5 cut(s) 408, 740, 751, 800, 1276
Hin6I GCGC 2 cut(s) 98, 254
HinP1I GCGC 2 cut(s) 98, 254
HinfI GANTC 6 cut(s) 93, 131, 487, 701, 1000, 1308
HpaII CCGG 1 cut(s) 1104
HphI GGTGA 2 cut(s) 160, 929
Hpy166II GTNNAC 3 cut(s) 268, 453, 857
Hpy188I TCNGA 9 cut(s) 139, 151, 240, 352, 547, 868, 909, 993, 1219
Hpy188III TCNNGA 6 cut(s) 244, 509, 593, 1104, 1312, 1337
Hpy8I GTNNAC 3 cut(s) 268, 453, 857
Hpy99I CGWCG 1 cut(s) 139
HpyAV CCTTC 4 cut(s) 193, 337, 506, 1128
HpyCH4III ACNGT 3 cut(s) 251, 831, 1043
HpyCH4IV ACGT 1 cut(s) 264
HpyF10VI GCNNNNNNNGC 8 cut(s) 200, 203, 212, 605, 797, 832, 880, 1174
HpyF3I CTNAG 6 cut(s) 26, 148, 349, 544, 551, 808
HpySE526I ACGT 1 cut(s) 264
Hsp92II CATG 5 cut(s) 408, 740, 751, 800, 1276
HspAI GCGC 2 cut(s) 98, 254
Kpn2I TCCGGA 1 cut(s) 1103
KspI CCGCGG 1 cut(s) 115
Kzo9I GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
LmnI GCTCC 3 cut(s) 879, 909, 1026
Lsp1109I GCAGC 7 cut(s) 181, 209, 212, 600, 731, 1005, 1027
LweI GCATC 5 cut(s) 231, 778, 910, 1080, 1164
MaeI CTAG 3 cut(s) 582, 656, 1280
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 2 cut(s) 58, 1126
MalI GATC 8 cut(s) 141, 242, 311, 480, 542, 741, 903, 1353
MboI GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
MboII GAAGA 3 cut(s) 637, 644, 896
MflI RGATCY 3 cut(s) 309, 540, 901
MhlI GDGCHC 4 cut(s) 213, 270, 885, 1048
MlsI TGGCCA 1 cut(s) 74
MluCI AATT 7 cut(s) 298, 409, 504, 754, 1075, 1266, 1323
MluNI TGGCCA 1 cut(s) 74
MlyI GAGTC 3 cut(s) 102, 496, 1317
MmeI TCCRAC 2 cut(s) 117, 1134
Mox20I TGGCCA 1 cut(s) 74
MroI TCCGGA 1 cut(s) 1103
MroXI GAANNNNTTC 2 cut(s) 437, 600
MscI TGGCCA 1 cut(s) 74
MseI TTAA 2 cut(s) 285, 503
Msp20I TGGCCA 1 cut(s) 74
MspA1I CMGCKG 3 cut(s) 114, 206, 1018
MspI CCGG 1 cut(s) 1104
MspR9I CCNGG 2 cut(s) 975, 1113
MvaI CCWGG 2 cut(s) 975, 1113
MvnI CGCG 3 cut(s) 98, 114, 215
MwoI GCNNNNNNNGC 8 cut(s) 200, 203, 212, 605, 797, 832, 880, 1174
NcoI CCATGG 1 cut(s) 404
NdeII GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
NlaIII CATG 5 cut(s) 408, 740, 751, 800, 1276
NlaIV GGNNCC 2 cut(s) 963, 979
NmeAIII GCCGAG 3 cut(s) 116, 126, 634
NmuCI GTSAC 1 cut(s) 1126
NsbI TGCGCA 1 cut(s) 255
NspI RCATGY 1 cut(s) 800
NspV TTCGAA 1 cut(s) 107
PaeI GCATGC 1 cut(s) 800
PceI AGGCCT 1 cut(s) 279
PdmI GAANNNNTTC 2 cut(s) 437, 600
PfeI GAWTC 3 cut(s) 131, 701, 1000
PflMI CCANNNNNTGG 1 cut(s) 1118
PleI GAGTC 3 cut(s) 101, 495, 1316
PpsI GAGTC 3 cut(s) 101, 495, 1316
Ppu21I YACGTR 1 cut(s) 265
PpuMI RGGWCCY 1 cut(s) 977
PsiI TTATAA 1 cut(s) 773
Psp5II RGGWCCY 1 cut(s) 977
Psp6I CCWGG 2 cut(s) 973, 1111
PspGI CCWGG 2 cut(s) 973, 1111
PspN4I GGNNCC 2 cut(s) 963, 979
PspPI GGNCC 8 cut(s) 175, 854, 893, 962, 977, 1051, 1109, 1166
PspPPI RGGWCCY 1 cut(s) 977
PstI CTGCAG 2 cut(s) 199, 1017
PstNI CAGNNNCTG 1 cut(s) 206
PsuI RGATCY 3 cut(s) 309, 540, 901
PvuII CAGCTG 1 cut(s) 1018
RsaI GTAC 4 cut(s) 218, 325, 380, 1030
RsaNI GTAC 4 cut(s) 217, 324, 379, 1029
SacII CCGCGG 1 cut(s) 115
SaqAI TTAA 2 cut(s) 285, 503
Sau3AI GATC 8 cut(s) 139, 240, 309, 478, 540, 739, 901, 1351
Sau96I GGNCC 8 cut(s) 175, 854, 893, 962, 977, 1051, 1109, 1166
SchI GAGTC 3 cut(s) 102, 496, 1317
ScrFI CCNGG 2 cut(s) 975, 1113
SduI GDGCHC 4 cut(s) 213, 270, 885, 1048
SfaNI GCATC 5 cut(s) 231, 778, 910, 1080, 1164
SfcI CTRYAG 2 cut(s) 195, 1013
Sfr303I CCGCGG 1 cut(s) 115
SfuI TTCGAA 1 cut(s) 107
SgrBI CCGCGG 1 cut(s) 115
SinI GGWCC 5 cut(s) 175, 854, 893, 977, 1109
SphI GCATGC 1 cut(s) 800
Sse9I AATT 7 cut(s) 298, 409, 504, 754, 1075, 1266, 1323
SseBI AGGCCT 1 cut(s) 279
SsiI CCGC 6 cut(s) 88, 112, 114, 204, 220, 1276
SspMI CTAG 3 cut(s) 582, 656, 1280
StuI AGGCCT 1 cut(s) 279
StyD4I CCNGG 2 cut(s) 973, 1111
StyI CCWWGG 4 cut(s) 171, 404, 414, 1024
TaaI ACNGT 3 cut(s) 251, 831, 1043
TaiI ACGT 1 cut(s) 267
TaqI TCGA 3 cut(s) 107, 446, 1313
TaqII GACCGA 1 cut(s) 138
TasI AATT 7 cut(s) 298, 409, 504, 754, 1075, 1266, 1323
TauI GCSGC 3 cut(s) 117, 206, 1279
TfiI GAWTC 3 cut(s) 131, 701, 1000
Tru1I TTAA 2 cut(s) 285, 503
Tru9I TTAA 2 cut(s) 285, 503
TscAI CASTG 6 cut(s) 322, 336, 798, 945, 1048, 1135
TseFI GTSAC 1 cut(s) 1126
TseI GCWGC 7 cut(s) 194, 197, 200, 613, 719, 1015, 1018
Tsp45I GTSAC 1 cut(s) 1126
TspDTI ATGAA 2 cut(s) 992, 1239
TspRI CASTG 6 cut(s) 322, 336, 798, 945, 1048, 1135
Van91I CCANNNNNTGG 1 cut(s) 1118
VneI GTGCAC 1 cut(s) 266
VpaK11BI GGWCC 5 cut(s) 175, 854, 893, 977, 1109
XapI RAATTY 2 cut(s) 409, 754
XceI RCATGY 1 cut(s) 800
XmnI GAANNNNTTC 2 cut(s) 437, 600
XspI CTAG 3 cut(s) 582, 656, 1280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.