Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61740 AT3G61740 |
| fragaria_vesca | FvH4_1g22790 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 |
| malus_domestica | MD01G1080200.v1.1 |
| prunus_persica | Prupe.2G187600_v2.0.a1 |
| pyrus_communis | pycom01g10850 |
| rosa_chinensis | RchiOBHm_Chr1g0359381 RchiOBHm_Chr2g0117111 |
| rosa_laevigata | RLG00000018331 RLG00000027874 |
| rosa_multiflora | Rmu_sc0005833.1_g000005 Rmu_ssc0000358.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00126700 Rroxscaffold_4G00297040 |
| rosa_rugosa | Rorug01G0270700 Rorug01G0270800 Rorug02G0210600.1 |
| rosa_samantha | Rh1AG284200 Rh1BG250300 Rh1CG268200 Rh1DG279200 Rh2AG266300 Rh2BG278700 Rh2DG273500 Rh2DG292600 |
| rosa_wichuraiana | Rw1G025230 Rw2G021020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2077 |
| AccB1I | GGYRCC | 2 cut(s) | 1254, 2389 |
| AccII | CGCG | 2 cut(s) | 92, 2704 |
| AccIII | TCCGGA | 2 cut(s) | 273, 3013 |
| AciI | CCGC | 5 cut(s) | 90, 106, 162, 1026, 1787 |
| AclI | AACGTT | 1 cut(s) | 46 |
| AclWI | GGATC | 4 cut(s) | 1411, 2628, 2924, 3005 |
| AcoI | YGGCCR | 1 cut(s) | 722 |
| AcsI | RAATTY | 9 cut(s) | 23, 83, 220, 294, 466, 1326, 2601, 2710, 3071 |
| AcuI | CTGAAG | 1 cut(s) | 2356 |
| AcyI | GRCGYC | 1 cut(s) | 1720 |
| AdeI | CACNNNGTG | 4 cut(s) | 1202, 1580, 2001, 2154 |
| AfaI | GTAC | 5 cut(s) | 122, 179, 1195, 2575, 2996 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1964, 2075, 2530, 3066 |
| AflIII | ACRYGT | 1 cut(s) | 1450 |
| AjiI | CACGTC | 2 cut(s) | 517, 1453 |
| AjnI | CCWGG | 3 cut(s) | 441, 784, 1350 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2058, 2090, 2530, 2562 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1500, 1501, 1532, 1533 |
| Alw21I | GWGCWC | 3 cut(s) | 263, 1359, 1860 |
| Alw26I | GTCTC | 2 cut(s) | 2017, 2426 |
| Alw44I | GTGCAC | 1 cut(s) | 1856 |
| AlwI | GGATC | 4 cut(s) | 1411, 2628, 2924, 3005 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2300 |
| Aor13HI | TCCGGA | 2 cut(s) | 273, 3013 |
| AoxI | GGCC | 5 cut(s) | 14, 197, 722, 2534, 2759 |
| ApaLI | GTGCAC | 1 cut(s) | 1856 |
| ApeKI | GCWGC | 4 cut(s) | 159, 2336, 2459, 2506 |
| ApoI | RAATTY | 9 cut(s) | 23, 83, 220, 294, 466, 1326, 2601, 2710, 3071 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 977, 1009 |
| AseI | ATTAAT | 1 cut(s) | 237 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 476 |
| AspLEI | GCGC | 3 cut(s) | 1877, 2021, 2704 |
| AspS9I | GGNCC | 5 cut(s) | 198, 211, 1348, 2283, 2534 |
| AsuC2I | CCSGG | 3 cut(s) | 265, 716, 2657 |
| AsuHPI | GGTGA | 9 cut(s) | 692, 745, 862, 2513, 2645, 2759, 2767, 2942, 2993 |
| AsuII | TTCGAA | 2 cut(s) | 27, 470 |
| AsuNHI | GCTAGC | 1 cut(s) | 2509 |
| AvaII | GGWCC | 3 cut(s) | 211, 1348, 2283 |
| BaeGI | GKGCMC | 1 cut(s) | 1860 |
| BalI | TGGCCA | 1 cut(s) | 724 |
| BanI | GGYRCC | 2 cut(s) | 1254, 2389 |
| BanII | GRGCYC | 3 cut(s) | 66, 263, 1169 |
| BauI | CACGAG | 1 cut(s) | 285 |
| BbsI | GAAGAC | 2 cut(s) | 516, 2943 |
| Bbv12I | GWGCWC | 3 cut(s) | 263, 1359, 1860 |
| BbvI | GCAGC | 4 cut(s) | 171, 2323, 2446, 2518 |
| BccI | CCATC | 7 cut(s) | 584, 937, 1259, 1283, 1791, 2401, 2682 |
| BceAI | ACGGC | 3 cut(s) | 29, 713, 2016 |
| BciT130I | CCWGG | 3 cut(s) | 443, 786, 1352 |
| BciVI | GTATCC | 1 cut(s) | 2235 |
| BclI | TGATCA | 1 cut(s) | 544 |
| BcnI | CCSGG | 3 cut(s) | 265, 716, 2657 |
| BcoDI | GTCTC | 2 cut(s) | 2017, 2426 |
| BfaI | CTAG | 4 cut(s) | 1578, 2228, 2510, 2763 |
| BfmI | CTRYAG | 6 cut(s) | 72, 878, 1485, 1603, 2206, 3064 |
| BfuAI | ACCTGC | 1 cut(s) | 2077 |
| BfuI | GTATCC | 1 cut(s) | 2235 |
| BglII | AGATCT | 1 cut(s) | 2773 |
| BisI | GCNGC | 4 cut(s) | 160, 2337, 2460, 2507 |
| BlsI | GCNGC | 4 cut(s) | 161, 2338, 2461, 2508 |
| Bme1390I | CCNGG | 6 cut(s) | 265, 443, 716, 786, 1352, 2657 |
| Bme18I | GGWCC | 3 cut(s) | 211, 1348, 2283 |
| BmgBI | CACGTC | 2 cut(s) | 517, 1453 |
| BmgT120I | GGNCC | 5 cut(s) | 198, 211, 1348, 2283, 2534 |
| BmiI | GGNNCC | 6 cut(s) | 1256, 2067, 2143, 2285, 2391, 2535 |
| BmrFI | CCNGG | 6 cut(s) | 265, 443, 716, 786, 1352, 2657 |
| BmrI | ACTGGG | 2 cut(s) | 1056, 2146 |
| BmsI | GCATC | 5 cut(s) | 291, 2201, 2287, 2456, 2839 |
| BmtI | GCTAGC | 1 cut(s) | 2513 |
| BmuI | ACTGGG | 2 cut(s) | 1056, 2146 |
| BpiI | GAAGAC | 2 cut(s) | 516, 2943 |
| BpmI | CTGGAG | 1 cut(s) | 1373 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1473 |
| Bpu14I | TTCGAA | 2 cut(s) | 27, 470 |
| BpuEI | CTTGAG | 1 cut(s) | 2590 |
| BpuMI | CCSGG | 3 cut(s) | 265, 716, 2657 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2246, 2814 |
| BsaHI | GRCGYC | 1 cut(s) | 1720 |
| BsaJI | CCNNGG | 2 cut(s) | 729, 2550 |
| BsaWI | WCCGGW | 2 cut(s) | 273, 3013 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 947, 977, 2715, 2745 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1964, 2075, 2530, 3066 |
| Bse1I | ACTGG | 7 cut(s) | 214, 1051, 1332, 1437, 1662, 1754, 2152 |
| Bse3DI | GCAATG | 3 cut(s) | 142, 2766, 2955 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2246, 2814 |
| BseAI | TCCGGA | 2 cut(s) | 273, 3013 |
| BseBI | CCWGG | 3 cut(s) | 443, 786, 1352 |
| BseDI | CCNNGG | 2 cut(s) | 729, 2550 |
| BseGI | GGATG | 2 cut(s) | 2693, 3022 |
| BseJI | GATNNNNATC | 2 cut(s) | 2246, 2814 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1964, 2075, 2530, 3066 |
| BseMI | GCAATG | 3 cut(s) | 142, 2766, 2955 |
| BseMII | CTCAG | 8 cut(s) | 141, 1091, 1275, 1305, 1464, 2397, 2442, 2768 |
| BseNI | ACTGG | 7 cut(s) | 214, 1051, 1332, 1437, 1662, 1754, 2152 |
| BseRI | GAGGAG | 2 cut(s) | 968, 1980 |
| BseSI | GKGCMC | 1 cut(s) | 1860 |
| BseXI | GCAGC | 4 cut(s) | 171, 2323, 2446, 2518 |
| BsgI | GTGCAG | 4 cut(s) | 1428, 1907, 2131, 2292 |
| Bsh1236I | CGCG | 2 cut(s) | 92, 2704 |
| BshFI | GGCC | 5 cut(s) | 16, 199, 724, 2536, 2761 |
| BshNI | GGYRCC | 2 cut(s) | 1254, 2389 |
| BsiHKAI | GWGCWC | 3 cut(s) | 263, 1359, 1860 |
| BsiSI | CCGG | 6 cut(s) | 264, 274, 716, 2656, 2944, 3014 |
| BsiWI | CGTACG | 1 cut(s) | 2994 |
| BslFI | GGGAC | 2 cut(s) | 1012, 3023 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1964, 2075, 2530, 3066 |
| BsmAI | GTCTC | 2 cut(s) | 2017, 2426 |
| BsmFI | GGGAC | 2 cut(s) | 1012, 3023 |
| BsmI | GAATGC | 1 cut(s) | 1871 |
| BsnI | GGCC | 5 cut(s) | 16, 199, 724, 2536, 2761 |
| Bsp119I | TTCGAA | 2 cut(s) | 27, 470 |
| Bsp1286I | GDGCHC | 5 cut(s) | 66, 263, 1169, 1359, 1860 |
| Bsp13I | TCCGGA | 2 cut(s) | 273, 3013 |
| Bsp1407I | TGTACA | 1 cut(s) | 1193 |
| BspACI | CCGC | 5 cut(s) | 90, 106, 162, 1026, 1787 |
| BspANI | GGCC | 5 cut(s) | 16, 199, 724, 2536, 2761 |
| BspCNI | CTCAG | 8 cut(s) | 140, 1090, 1274, 1306, 1465, 2398, 2441, 2769 |
| BspEI | TCCGGA | 2 cut(s) | 273, 3013 |
| BspFNI | CGCG | 2 cut(s) | 92, 2704 |
| BspHI | TCATGA | 2 cut(s) | 2053, 2919 |
| BspLI | GGNNCC | 6 cut(s) | 1256, 2067, 2143, 2285, 2391, 2535 |
| BspMAI | CTGCAG | 1 cut(s) | 882 |
| BspMI | ACCTGC | 1 cut(s) | 2077 |
| BspOI | GCTAGC | 1 cut(s) | 2513 |
| BspPI | GGATC | 4 cut(s) | 1411, 2628, 2924, 3005 |
| BspQI | GCTCTTC | 2 cut(s) | 54, 701 |
| BspT104I | TTCGAA | 2 cut(s) | 27, 470 |
| BspT107I | GGYRCC | 2 cut(s) | 1254, 2389 |
| BsrDI | GCAATG | 3 cut(s) | 142, 2766, 2955 |
| BsrGI | TGTACA | 1 cut(s) | 1193 |
| BsrI | ACTGG | 7 cut(s) | 214, 1051, 1332, 1437, 1662, 1754, 2152 |
| BssECI | CCNNGG | 2 cut(s) | 729, 2550 |
| BssNI | GRCGYC | 1 cut(s) | 1720 |
| BssSI | CACGAG | 1 cut(s) | 285 |
| BssT1I | CCWWGG | 1 cut(s) | 2550 |
| Bst2BI | CACGAG | 1 cut(s) | 285 |
| Bst2UI | CCWGG | 3 cut(s) | 443, 786, 1352 |
| Bst4CI | ACNGT | 5 cut(s) | 912, 1486, 2141, 2225, 3065 |
| Bst6I | CTCTTC | 4 cut(s) | 54, 180, 701, 2825 |
| BstACI | GRCGYC | 1 cut(s) | 1720 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2811 |
| BstAUI | TGTACA | 1 cut(s) | 1193 |
| BstBI | TTCGAA | 2 cut(s) | 27, 470 |
| BstC8I | GCNNGC | 9 cut(s) | 53, 726, 753, 926, 1311, 2203, 2511, 2875, 2897 |
| BstDSI | CCRYGG | 1 cut(s) | 729 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1962 |
| BstF5I | GGATG | 2 cut(s) | 2693, 3022 |
| BstFNI | CGCG | 2 cut(s) | 92, 2704 |
| BstHHI | GCGC | 3 cut(s) | 1877, 2021, 2704 |
| BstMAI | GTCTC | 2 cut(s) | 2017, 2426 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 61, 132, 635, 725, 965, 1380, 2198, 2811 |
| BstNI | CCWGG | 3 cut(s) | 443, 786, 1352 |
| BstNSI | RCATGY | 3 cut(s) | 1313, 1920, 2899 |
| BstSCI | CCNGG | 6 cut(s) | 263, 441, 714, 784, 1350, 2655 |
| BstSFI | CTRYAG | 6 cut(s) | 72, 878, 1485, 1603, 2206, 3064 |
| BstSLI | GKGCMC | 1 cut(s) | 1860 |
| BstUI | CGCG | 2 cut(s) | 92, 2704 |
| BstV1I | GCAGC | 4 cut(s) | 171, 2323, 2446, 2518 |
| BstV2I | GAAGAC | 2 cut(s) | 516, 2943 |
| BstX2I | RGATCY | 1 cut(s) | 2773 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 488, 1265 |
| BstYI | RGATCY | 1 cut(s) | 2773 |
| BsuI | GTATCC | 1 cut(s) | 2235 |
| BsuRI | GGCC | 5 cut(s) | 16, 199, 724, 2536, 2761 |
| BtgI | CCRYGG | 1 cut(s) | 729 |
| BtgZI | GCGATG | 1 cut(s) | 603 |
| BtrI | CACGTC | 2 cut(s) | 517, 1453 |
| BtsCI | GGATG | 2 cut(s) | 2693, 3022 |
| BtsIMutI | CAGTG | 3 cut(s) | 1655, 2159, 2836 |
| BveI | ACCTGC | 1 cut(s) | 2077 |
| Cac8I | GCNNGC | 9 cut(s) | 53, 726, 753, 926, 1311, 2203, 2511, 2875, 2897 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2300 |
| CciI | TCATGA | 2 cut(s) | 2053, 2919 |
| CfoI | GCGC | 3 cut(s) | 1877, 2021, 2704 |
| Cfr13I | GGNCC | 5 cut(s) | 198, 211, 1348, 2283, 2534 |
| CseI | GACGC | 1 cut(s) | 1709 |
| Csp6I | GTAC | 5 cut(s) | 121, 178, 1194, 2574, 2995 |
| CviQI | GTAC | 5 cut(s) | 121, 178, 1194, 2574, 2995 |
| DraI | TTTAAA | 2 cut(s) | 2479, 2581 |
| DraIII | CACNNNGTG | 4 cut(s) | 1202, 1580, 2001, 2154 |
| EaeI | YGGCCR | 1 cut(s) | 722 |
| Eam1104I | CTCTTC | 4 cut(s) | 54, 180, 701, 2825 |
| EarI | CTCTTC | 4 cut(s) | 54, 180, 701, 2825 |
| Ecl136II | GAGCTC | 1 cut(s) | 261 |
| Eco130I | CCWWGG | 1 cut(s) | 2550 |
| Eco147I | AGGCCT | 1 cut(s) | 2761 |
| Eco24I | GRGCYC | 3 cut(s) | 66, 263, 1169 |
| Eco47I | GGWCC | 3 cut(s) | 211, 1348, 2283 |
| Eco53kI | GAGCTC | 1 cut(s) | 261 |
| Eco57I | CTGAAG | 1 cut(s) | 2356 |
| EcoICRI | GAGCTC | 1 cut(s) | 261 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1962 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1348, 2283 |
| EcoRI | GAATTC | 2 cut(s) | 294, 466 |
| EcoRII | CCWGG | 3 cut(s) | 441, 784, 1350 |
| EcoT14I | CCWWGG | 1 cut(s) | 2550 |
| EcoT38I | GRGCYC | 3 cut(s) | 66, 263, 1169 |
| ErhI | CCWWGG | 1 cut(s) | 2550 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2354, 2386 |
| FaqI | GGGAC | 2 cut(s) | 1012, 3023 |
| FauI | CCCGC | 1 cut(s) | 1033 |
| FauNDI | CATATG | 3 cut(s) | 1238, 1513, 1530 |
| FbaI | TGATCA | 1 cut(s) | 544 |
| Fnu4HI | GCNGC | 4 cut(s) | 160, 2337, 2460, 2507 |
| FokI | GGATG | 2 cut(s) | 2700, 3029 |
| FriOI | GRGCYC | 3 cut(s) | 66, 263, 1169 |
| Fsp4HI | GCNGC | 4 cut(s) | 160, 2337, 2460, 2507 |
| FspBI | CTAG | 4 cut(s) | 1578, 2228, 2510, 2763 |
| GlaI | GCGC | 3 cut(s) | 1876, 2020, 2703 |
| GluI | GCNGC | 4 cut(s) | 160, 2337, 2460, 2507 |
| GsuI | CTGGAG | 1 cut(s) | 1373 |
| HaeIII | GGCC | 5 cut(s) | 16, 199, 724, 2536, 2761 |
| HapII | CCGG | 6 cut(s) | 264, 274, 716, 2656, 2944, 3014 |
| HgaI | GACGC | 1 cut(s) | 1709 |
| HhaI | GCGC | 3 cut(s) | 1877, 2021, 2704 |
| Hin1I | GRCGYC | 1 cut(s) | 1720 |
| Hin6I | GCGC | 3 cut(s) | 1875, 2019, 2702 |
| HinP1I | GCGC | 3 cut(s) | 1875, 2019, 2702 |
| HincII | GTYRAC | 1 cut(s) | 1993 |
| HindII | GTYRAC | 1 cut(s) | 1993 |
| HindIII | AAGCTT | 1 cut(s) | 991 |
| HinfI | GANTC | 8 cut(s) | 94, 253, 323, 1468, 2050, 2079, 2134, 2594 |
| HpaII | CCGG | 6 cut(s) | 264, 274, 716, 2656, 2944, 3014 |
| HphI | GGTGA | 9 cut(s) | 692, 745, 862, 2513, 2645, 2759, 2767, 2942, 2993 |
| Hpy166II | GTNNAC | 5 cut(s) | 1196, 1770, 1858, 1993, 2278 |
| Hpy8I | GTNNAC | 5 cut(s) | 1196, 1770, 1858, 1993, 2278 |
| Hpy99I | CGWCG | 1 cut(s) | 518 |
| HpyCH4III | ACNGT | 5 cut(s) | 912, 1486, 2141, 2225, 3065 |
| HpyCH4IV | ACGT | 7 cut(s) | 46, 516, 1171, 1423, 1452, 2970, 2993 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 61, 132, 635, 725, 965, 1380, 2198, 2811 |
| HpySE526I | ACGT | 7 cut(s) | 46, 516, 1171, 1423, 1452, 2970, 2993 |
| Hsp92I | GRCGYC | 1 cut(s) | 1720 |
| HspAI | GCGC | 3 cut(s) | 1875, 2019, 2702 |
| Kpn2I | TCCGGA | 2 cut(s) | 273, 3013 |
| Ksp22I | TGATCA | 1 cut(s) | 544 |
| LguI | GCTCTTC | 2 cut(s) | 54, 701 |
| LmnI | GCTCC | 6 cut(s) | 226, 258, 266, 760, 1354, 3061 |
| Lsp1109I | GCAGC | 4 cut(s) | 171, 2323, 2446, 2518 |
| LweI | GCATC | 5 cut(s) | 291, 2201, 2287, 2456, 2839 |
| MaeI | CTAG | 4 cut(s) | 1578, 2228, 2510, 2763 |
| MaeII | ACGT | 7 cut(s) | 46, 516, 1171, 1423, 1452, 2970, 2993 |
| MaeIII | GTNAC | 5 cut(s) | 282, 680, 1132, 1319, 2930 |
| MflI | RGATCY | 1 cut(s) | 2773 |
| MhlI | GDGCHC | 5 cut(s) | 66, 263, 1169, 1359, 1860 |
| MlsI | TGGCCA | 1 cut(s) | 724 |
| MluNI | TGGCCA | 1 cut(s) | 724 |
| MmeI | TCCRAC | 1 cut(s) | 2056 |
| Mox20I | TGGCCA | 1 cut(s) | 724 |
| MroI | TCCGGA | 2 cut(s) | 273, 3013 |
| MroXI | GAANNNNTTC | 1 cut(s) | 476 |
| MscI | TGGCCA | 1 cut(s) | 724 |
| MseI | TTAA | 9 cut(s) | 237, 318, 1211, 1695, 1758, 2478, 2580, 2879, 2883 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1263, 2924 |
| Msp20I | TGGCCA | 1 cut(s) | 724 |
| MspA1I | CMGCKG | 1 cut(s) | 162 |
| MspI | CCGG | 6 cut(s) | 264, 274, 716, 2656, 2944, 3014 |
| MspR9I | CCNGG | 6 cut(s) | 265, 443, 716, 786, 1352, 2657 |
| Mva1269I | GAATGC | 1 cut(s) | 1871 |
| MvaI | CCWGG | 3 cut(s) | 443, 786, 1352 |
| MvnI | CGCG | 2 cut(s) | 92, 2704 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 61, 132, 635, 725, 965, 1380, 2198, 2811 |
| NciI | CCSGG | 3 cut(s) | 265, 716, 2657 |
| NdeI | CATATG | 3 cut(s) | 1238, 1513, 1530 |
| NheI | GCTAGC | 1 cut(s) | 2509 |
| NlaIV | GGNNCC | 6 cut(s) | 1256, 2067, 2143, 2285, 2391, 2535 |
| NmuCI | GTSAC | 4 cut(s) | 282, 680, 1319, 2930 |
| NspI | RCATGY | 3 cut(s) | 1313, 1920, 2899 |
| NspV | TTCGAA | 2 cut(s) | 27, 470 |
| PacI | TTAATTAA | 1 cut(s) | 2883 |
| PaeI | GCATGC | 2 cut(s) | 1313, 2899 |
| PagI | TCATGA | 2 cut(s) | 2053, 2919 |
| PceI | AGGCCT | 1 cut(s) | 2761 |
| PciSI | GCTCTTC | 2 cut(s) | 54, 701 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 63 |
| PctI | GAATGC | 1 cut(s) | 1871 |
| PdmI | GAANNNNTTC | 1 cut(s) | 476 |
| PfeI | GAWTC | 8 cut(s) | 94, 253, 323, 1468, 2050, 2079, 2134, 2594 |
| Pfl23II | CGTACG | 1 cut(s) | 2994 |
| PfoI | TCCNGGA | 1 cut(s) | 263 |
| PkrI | GCNGC | 4 cut(s) | 161, 2338, 2461, 2508 |
| PpuMI | RGGWCCY | 2 cut(s) | 1348, 2283 |
| PshBI | ATTAAT | 1 cut(s) | 237 |
| Psp124BI | GAGCTC | 1 cut(s) | 263 |
| Psp1406I | AACGTT | 1 cut(s) | 46 |
| Psp5II | RGGWCCY | 2 cut(s) | 1348, 2283 |
| Psp6I | CCWGG | 3 cut(s) | 441, 784, 1350 |
| PspGI | CCWGG | 3 cut(s) | 441, 784, 1350 |
| PspLI | CGTACG | 1 cut(s) | 2994 |
| PspN4I | GGNNCC | 6 cut(s) | 1256, 2067, 2143, 2285, 2391, 2535 |
| PspPI | GGNCC | 5 cut(s) | 198, 211, 1348, 2283, 2534 |
| PspPPI | RGGWCCY | 2 cut(s) | 1348, 2283 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1534, 1566 |
| PstI | CTGCAG | 1 cut(s) | 882 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2300 |
| PsuI | RGATCY | 1 cut(s) | 2773 |
| RsaI | GTAC | 5 cut(s) | 122, 179, 1195, 2575, 2996 |
| RsaNI | GTAC | 5 cut(s) | 121, 178, 1194, 2574, 2995 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1263, 2924 |
| SacI | GAGCTC | 1 cut(s) | 263 |
| SapI | GCTCTTC | 2 cut(s) | 54, 701 |
| SaqAI | TTAA | 9 cut(s) | 237, 318, 1211, 1695, 1758, 2478, 2580, 2879, 2883 |
| SatI | GCNGC | 4 cut(s) | 160, 2337, 2460, 2507 |
| Sau96I | GGNCC | 5 cut(s) | 198, 211, 1348, 2283, 2534 |
| ScrFI | CCNGG | 6 cut(s) | 265, 443, 716, 786, 1352, 2657 |
| SduI | GDGCHC | 5 cut(s) | 66, 263, 1169, 1359, 1860 |
| SfaNI | GCATC | 5 cut(s) | 291, 2201, 2287, 2456, 2839 |
| SfcI | CTRYAG | 6 cut(s) | 72, 878, 1485, 1603, 2206, 3064 |
| SfuI | TTCGAA | 2 cut(s) | 27, 470 |
| SinI | GGWCC | 3 cut(s) | 211, 1348, 2283 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1263, 2924 |
| SmlI | CTYRAG | 1 cut(s) | 2569 |
| SmoI | CTYRAG | 1 cut(s) | 2569 |
| SphI | GCATGC | 2 cut(s) | 1313, 2899 |
| SseBI | AGGCCT | 1 cut(s) | 2761 |
| SsiI | CCGC | 5 cut(s) | 90, 106, 162, 1026, 1787 |
| SspI | AATATT | 4 cut(s) | 485, 1070, 1229, 2517 |
| SspMI | CTAG | 4 cut(s) | 1578, 2228, 2510, 2763 |
| SstI | GAGCTC | 1 cut(s) | 263 |
| StuI | AGGCCT | 1 cut(s) | 2761 |
| StyD4I | CCNGG | 6 cut(s) | 263, 441, 714, 784, 1350, 2655 |
| StyI | CCWWGG | 1 cut(s) | 2550 |
| TaaI | ACNGT | 5 cut(s) | 912, 1486, 2141, 2225, 3065 |
| TaiI | ACGT | 7 cut(s) | 49, 519, 1174, 1426, 1455, 2973, 2996 |
| TaqI | TCGA | 7 cut(s) | 27, 57, 311, 470, 738, 1394, 2423 |
| TatI | WGTACW | 2 cut(s) | 1193, 2573 |
| TfiI | GAWTC | 8 cut(s) | 94, 253, 323, 1468, 2050, 2079, 2134, 2594 |
| Tru1I | TTAA | 9 cut(s) | 237, 318, 1211, 1695, 1758, 2478, 2580, 2879, 2883 |
| Tru9I | TTAA | 9 cut(s) | 237, 318, 1211, 1695, 1758, 2478, 2580, 2879, 2883 |
| TscAI | CASTG | 3 cut(s) | 1662, 2159, 2836 |
| TseFI | GTSAC | 4 cut(s) | 282, 680, 1319, 2930 |
| TseI | GCWGC | 4 cut(s) | 159, 2336, 2459, 2506 |
| Tsp45I | GTSAC | 4 cut(s) | 282, 680, 1319, 2930 |
| TspGWI | ACGGA | 1 cut(s) | 1790 |
| TspRI | CASTG | 3 cut(s) | 1662, 2159, 2836 |
| VneI | GTGCAC | 1 cut(s) | 1856 |
| VpaK11BI | GGWCC | 3 cut(s) | 211, 1348, 2283 |
| VspI | ATTAAT | 1 cut(s) | 237 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1962 |
| XapI | RAATTY | 9 cut(s) | 23, 83, 220, 294, 466, 1326, 2601, 2710, 3071 |
| XbaI | TCTAGA | 1 cut(s) | 2227 |
| XceI | RCATGY | 3 cut(s) | 1313, 1920, 2899 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 1043, 1265, 1662, 1868 |
| XmnI | GAANNNNTTC | 1 cut(s) | 476 |
| XspI | CTAG | 4 cut(s) | 1578, 2228, 2510, 2763 |