RchiOBHm_Chr1g0359381
ERF Family

Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0003180
Physical Location & Seq
Reverse (-)
51356808 .. 51364822
8015 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58444

Sequence Viewer

Length: 3132 bp
ATGATAATTAAGCGGCCGTCGAGATTTGAAATGCCGAATTTGAAACGGTGTAAGCTGGAGGAGGCGGAAGCTAAGGCCTATGCGTATTCGGCGAATCCGAAGAGGCGGAAAGCGAATGGGTACTGCTCAGTTGGCAATGGCATGGGGGAGGATTTGAGCAGCGGCTCCGGTTCGTCGGGATACGACGAGTCGTTTTCGGCTGCGGTCGAGGTGGTGGAGTCGAATTTGCAGCGGTTGAGTAAGCGGCGAGAAATGAATCGGAGGTCCGAGAAGTTGAGGAGGTCTGCTCGAGGACGGCCGCAAGTGCCGTCTTCGAGGTTTAACGGTTCAGGTGAGAAAAAGCAAGCGAAATATGTGGATACATATACGGTTTTTGAAGATGAAGAAGAATGTGATGTTTTAGCAGTGGAGGACAGAGAAGGGATTGAGAAATTGGGTTTTGTTAAAAAGCGTAAGGAGGTGATCAATGGGTTTAAGAAGTTGAAGAAGTTCCAATATTGTGGGAAGGTAGAGCAAGAAGAAGTGGATTATTATGATGATATTGGTTACAGACAGTATATGGGTTTGAAAAATTCGATAGCGTCGAAACGTGGTGGAAATTCTTTGCCAGAGGAAAGAAGTGAGGAATATGGAGCTGGGTTTAGTTTTGGCGGCAAGGAGAAAGTTCGCAAACCCGATTGTGCAAAGAAGAAAGAAGTGTATAAGCCGCAGGACTTTGCTTTGGGTGATATTGTTTGGGCTAAGTGTGGGAGGAGCTACCCAGTTTGGCCGGCAGTGGTTATCGACCCCATATTGCAAGCTCCAGAAGCAGTGTTGAGCTGCTGTATTCCTAATGCTATCTGTGTCATGTTCTTTGGGTTCTCAAAGAATGGAACACAAAGGGATTATGGGTGGGTGAAGCAGGGAATGATATATCCATTCAAGCAGTTCCTTGAGAGATTTCGAGGACAGACCCAGTTGTACAGGAGTAAACCAAGCGAGCTTCAGATGGCAATAGAGGAGGCGGTGTTAGCAGAAAATGGCTTTATTTACGCAGCTTGTAAAACTACTGATTCAGAGGCAAATGCCCCTGAAATCCAAGAGGCCACAGATTTTTATCAAGATCAGGCATATTACAGTCAGAATCTGAATCAGGAAGCATATCAGAAGGACACAAGACCTTGTGATTGCTGTGGTTTGATCACTCCTTCTAAAGCTATGAAAAAAGTGAAGGGCTCAGGTTCTGAAACCCAAGTTTTATGTAAACATTGTGCAAAGTTGAAAAAATCAAGACAATATTGTGGCATATGTAAGAAGATATGGCACCATTCAGATGGTGGAGATTGGGTATGCTGTGATGGCTGTAATGTTTGGGTGCATGCTGAGTGTGACAAAATTTCCAGTAAAGTTTTCAAGGACCCAGAGCACATTGATTACTATTGTCCTGATTGCAAAAATAAGGCCAAAGGTGAAATGTTAGATGAGTTACAGTGTCGGCAAAAACACAGTTCTGGCCGGAAATCTGTGACTGGCGTAACTGTGTCTGAGGTAACTGTGGTTTGTAATGGCATGGAAGGAACTTATGTACCAAACCTTCATATGGTTGCTTGTAAGTGTGGACCCTGTGATGAGTCAAAGATGCAGAGCCTTGGTGAATGGGAAAGGCACACAGGTTGTAGAGCAAAAAAATGGAAGCATAGTGTGAAAGTGAAGGCCACAATGCTAACACTGGAACAATGGATTGCAGAGTATAATGAACATGGCTTACAGCCTCTCAAATTAGATAAGCAGCGACTGCTTGATTCGTTACAAGAAAAGTACGAGCCAGTTAATGCAAAGTGGACAAGTGAAAGATGTGCAGTTTGTAGATGGGTTGAAGATTGGGAAGATAACAAAATGATCATATGCAACAGGTGTCAAATAGCTGTGCACCAAGAATGCTATGGTGCAAAAGATGTCCAGGATTTTACTTCATGGGTTTGTAGAGCATGTGAAACACCTGATATCATTAAGGAATGTTGTCTCTGTCCTGTAAAAGGAGGTGCTTTGAAGCCCACTGATGTTGACACCTTGTGGGTTCATGTCTCTTGTGCTTGGTTTCGTCCCGAAGTAGGTTTCTTGAATCATGAGAAGATGGAACCTGCTGTTGGAATCCTTAGAATCCCACCCACTACTTTTATGAAGCGTTGTGTAATTTGTACGCAGACTCATGGTTCCTGCACCACATGTTGCAAATGTGCCACTCATTTTCATGCAACCTGTGCATCAAGAGCAGGCTACAACATGGAATTGCACTGCCAAGAGAAGAATGGGAAACAAGTAACAACGAAGATGATATATTGTGCTGTGCACAGGATCCCTAATCCAGATGCTGTTGTTGTTGTTCGTACTCCTTCGGGGGTTTTTGCTGCCAGAAGCTTGCTTCAAAACGAGAAAGGGTTCTTCAGGGGTTCGAGGGTGGTCTCATCAAAGAGGACTGAAGTTCCAGAACCTTCAACCTCAGAGTCTGATGAGTTAGAACCACTCTCTGCTGCAAGATGCCGTGCTATTAAAAGATCAAATTTTAAGGGAGGTGAGCGGCTACCAATTTTTCATCGACCAAGGGGACCAACACATCATTCATTAGACTCAGTGAATAGCTTGAGCACATTTATAGAAGTAGAAGATTCTAAAATTTTTTCTTCCTTCAAGGATCGGCTTTACCACTTGCAGAAAACTGAAAATCACCGGGTTTGTTTTGGTAAATCTGGAATACATGGTTGGGGTCTATTTGCGCGTAGGAATATTCAAGAAGGAGAAATGGTTGTTGAGTATCGTGGTGAGCGGGTAAGACGTAGTGTTGCAGATCTGAGGGAAGCACGGTACAGGCTACAAGGCAAAGATTGCTATCTTTTCAAGATCAGTGAGGAAGTAGTAATTGATGCTACATATAGAGGAAATATAGCACGGTTAATTAACCATTCGTGCACACCCAATTGCTATTCAAGGATCATGAGTGTGGGTGAGGAGAACCGAATAGTTCTCATTGCCAAGACTTGTGTTTCGGCCGGTGAAGAACTAACGTACGATTACTTGTTTGAGCCGGATGAATGTGACGAGCTGAGAGTTCCCTGTCTATGTAAAGCTCCCAACTGTAGGAAATTCTTGTGTTAG

Protein Analysis

1043

Amino Acids

118.43

Weight (kDa)

8.6

Isoelectric Point (pI)

47.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 242 - 337 7.3e-15 PWWP domain
PHD PF00628 427 - 477 6.7e-07 PHD-finger
PHD PF00628 612 - 657 9.5e-06 PHD-finger
PHD_2 PF13831 624 - 658 1.4e-12 PHD-finger
zf-HC5HC2H_2 PF13832 665 - 777 5.4e-26 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 687 - 778 1.2e-10 PHD-like zinc-binding domain
SET PF00856 913 - 1017 5.3e-26 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2128
AccB1I GGYRCC 1 cut(s) 1302
AccBSI CCGCTC 2 cut(s) 2557, 2803
AccII CGCG 1 cut(s) 2755
AclWI GGATC 4 cut(s) 2329, 2342, 2679, 2975
AcoI YGGCCR 5 cut(s) 14, 296, 767, 1492, 3024
AcsI RAATTY 8 cut(s) 37, 223, 571, 598, 1374, 2539, 2652, 3119
AcuI CTGAAG 3 cut(s) 968, 2407, 2478
AdeI CACNNNGTG 1 cut(s) 2052
AfaI GTAC 8 cut(s) 122, 962, 1566, 1799, 2179, 2368, 2843, 3044
AfiI CCNNNNNNNGG 5 cut(s) 1579, 2015, 2090, 2126, 3114
AflIII ACRYGT 1 cut(s) 2204
AjnI CCWGG 1 cut(s) 1938
AjuI GAANNNNNNNTTGG 6 cut(s) 2109, 2141, 2581, 2613, 2722, 2754
Alw21I GWGCWC 5 cut(s) 1407, 1911, 2331, 2627, 2948
Alw26I GTCTC 3 cut(s) 2006, 2068, 2446
Alw44I GTGCAC 3 cut(s) 1907, 2327, 2944
AlwI GGATC 4 cut(s) 2329, 2342, 2679, 2975
AlwNI CAGNNNCTG 5 cut(s) 1126, 1223, 1774, 2351, 2486
Ama87I CYCGRG 1 cut(s) 288
AoxI GGCC 9 cut(s) 14, 75, 296, 767, 1083, 1440, 1492, 1692, 3024
ApaLI GTGCAC 3 cut(s) 1907, 2327, 2944
ApeKI GCWGC 8 cut(s) 159, 200, 229, 819, 1034, 1768, 2387, 2510
ApoI RAATTY 8 cut(s) 37, 223, 571, 598, 1374, 2539, 2652, 3119
ArsI GACNNNNNNTTYG 2 cut(s) 3004, 3036
Asp700I GAANNNNTTC 2 cut(s) 488, 2417
AspLEI GCGC 1 cut(s) 2755
AspS9I GGNCC 4 cut(s) 264, 1396, 1598, 2585
AsuC2I CCSGG 1 cut(s) 2708
AvaI CYCGRG 1 cut(s) 288
AvaII GGWCC 4 cut(s) 264, 1396, 1598, 2585
BaeGI GKGCMC 3 cut(s) 1911, 2331, 2948
BaeI ACNNNNGTAYC 2 cut(s) 1548, 1581
BamHI GGATCC 1 cut(s) 2334
BanI GGYRCC 1 cut(s) 1302
BanII GRGCYC 1 cut(s) 1217
BarI GAAGNNNNNNTAC 2 cut(s) 1557, 1589
BbsI GAAGAC 1 cut(s) 303
Bbv12I GWGCWC 5 cut(s) 1407, 1911, 2331, 2627, 2948
BbvI GCAGC 8 cut(s) 171, 187, 241, 806, 1046, 1780, 2374, 2497
BccI CCATC 5 cut(s) 982, 1307, 1331, 1842, 2107
BceAI ACGGC 3 cut(s) 292, 311, 2505
BciT130I CCWGG 1 cut(s) 1940
BciVI GTATCC 2 cut(s) 173, 352
BclI TGATCA 3 cut(s) 462, 1179, 1878
BcnI CCSGG 1 cut(s) 2708
BcoDI GTCTC 3 cut(s) 2006, 2068, 2446
BfmI CTRYAG 1 cut(s) 3112
BfuAI ACCTGC 1 cut(s) 2128
BfuI GTATCC 2 cut(s) 173, 352
BglII AGATCT 1 cut(s) 2824
Bme1390I CCNGG 2 cut(s) 1940, 2708
Bme18I GGWCC 4 cut(s) 264, 1396, 1598, 2585
BmeT110I CYCGRG 1 cut(s) 288
BmgT120I GGNCC 4 cut(s) 264, 1396, 1598, 2585
BmiI GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
BmrFI CCNGG 2 cut(s) 1940, 2708
BmrI ACTGGG 2 cut(s) 755, 949
BmsI GCATC 5 cut(s) 1608, 2252, 2338, 2507, 2890
BmuI ACTGGG 2 cut(s) 755, 949
BpiI GAAGAC 1 cut(s) 303
BplI GAGNNNNNCTC 2 cut(s) 271, 303
BpmI CTGGAG 2 cut(s) 77, 786
Bpu10I CCTNAGC 2 cut(s) 72, 1216
BpuEI CTTGAG 2 cut(s) 953, 2641
BpuMI CCSGG 1 cut(s) 2708
BsaBI GATNNNNATC 2 cut(s) 1095, 2865
BsaI GGTCTC 1 cut(s) 2446
BsaJI CCNNGG 2 cut(s) 1627, 2579
BsaWI WCCGGW 1 cut(s) 167
BsaXI ACNNNNNCTCC 6 cut(s) 992, 1022, 1311, 1341, 2766, 2796
Bsc4I CCNNNNNNNGG 5 cut(s) 1579, 2015, 2090, 2126, 3114
Bse118I RCCGGY 2 cut(s) 769, 3026
Bse1I ACTGG 6 cut(s) 761, 955, 1380, 1513, 1713, 1805
Bse3DI GCAATG 2 cut(s) 142, 3003
Bse8I GATNNNNATC 2 cut(s) 1095, 2865
BseBI CCWGG 1 cut(s) 1940
BseDI CCNNGG 2 cut(s) 1627, 2579
BseGI GGATG 1 cut(s) 3070
BseJI GATNNNNATC 2 cut(s) 1095, 2865
BseLI CCNNNNNNNGG 5 cut(s) 1579, 2015, 2090, 2126, 3114
BseMI GCAATG 2 cut(s) 142, 3003
BseMII CTCAG 8 cut(s) 141, 1230, 1353, 1515, 2493, 2622, 2819, 3071
BseNI ACTGG 6 cut(s) 761, 955, 1380, 1513, 1713, 1805
BseRI GAGGAG 5 cut(s) 74, 292, 766, 1013, 2999
BseSI GKGCMC 3 cut(s) 1911, 2331, 2948
BseX3I CGGCCG 3 cut(s) 14, 296, 3024
BseXI GCAGC 8 cut(s) 171, 187, 241, 806, 1046, 1780, 2374, 2497
BseYI CCCAGC 1 cut(s) 635
BsgI GTGCAG 2 cut(s) 1857, 2182
Bsh1236I CGCG 1 cut(s) 2755
Bsh1285I CGRYCG 4 cut(s) 17, 207, 299, 3027
BshFI GGCC 9 cut(s) 16, 77, 298, 769, 1085, 1442, 1494, 1694, 3026
BshNI GGYRCC 1 cut(s) 1302
BsiEI CGRYCG 4 cut(s) 17, 207, 299, 3027
BsiHKAI GWGCWC 5 cut(s) 1407, 1911, 2331, 2627, 2948
BsiHKCI CYCGRG 1 cut(s) 288
BsiSI CCGG 6 cut(s) 168, 770, 1495, 2707, 3027, 3062
BsiWI CGTACG 1 cut(s) 3042
BslFI GGGAC 2 cut(s) 2067, 2598
BslI CCNNNNNNNGG 5 cut(s) 1579, 2015, 2090, 2126, 3114
BsmAI GTCTC 3 cut(s) 2006, 2068, 2446
BsmFI GGGAC 2 cut(s) 2067, 2598
BsmI GAATGC 1 cut(s) 1922
BsnI GGCC 9 cut(s) 16, 77, 298, 769, 1085, 1442, 1494, 1694, 3026
Bso31I GGTCTC 1 cut(s) 2446
BsoBI CYCGRG 1 cut(s) 288
Bsp1286I GDGCHC 6 cut(s) 1217, 1407, 1911, 2331, 2627, 2948
Bsp1407I TGTACA 1 cut(s) 960
BspANI GGCC 9 cut(s) 16, 77, 298, 769, 1085, 1442, 1494, 1694, 3026
BspCNI CTCAG 8 cut(s) 140, 1229, 1354, 1516, 2492, 2621, 2820, 3072
BspFNI CGCG 1 cut(s) 2755
BspHI TCATGA 2 cut(s) 2104, 2970
BspLI GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
BspMI ACCTGC 1 cut(s) 2128
BspPI GGATC 4 cut(s) 2329, 2342, 2679, 2975
BspT107I GGYRCC 1 cut(s) 1302
BspTNI GGTCTC 1 cut(s) 2446
BsrBI CCGCTC 2 cut(s) 2557, 2803
BsrDI GCAATG 2 cut(s) 142, 3003
BsrFI RCCGGY 2 cut(s) 769, 3026
BsrGI TGTACA 1 cut(s) 960
BsrI ACTGG 6 cut(s) 761, 955, 1380, 1513, 1713, 1805
BssAI RCCGGY 2 cut(s) 769, 3026
BssECI CCNNGG 2 cut(s) 1627, 2579
BssT1I CCWWGG 2 cut(s) 1627, 2579
Bst2UI CCWGG 1 cut(s) 1940
Bst6I CTCTTC 1 cut(s) 95
BstAPI GCANNNNNTGC 3 cut(s) 1774, 2240, 2862
BstAUI TGTACA 1 cut(s) 960
BstC8I GCNNGC 7 cut(s) 345, 771, 798, 980, 1359, 2254, 2399
BstENI CCTNNNNNAGG 1 cut(s) 2013
BstF5I GGATG 1 cut(s) 3070
BstFNI CGCG 1 cut(s) 2755
BstHHI GCGC 1 cut(s) 2755
BstMAI GTCTC 3 cut(s) 2006, 2068, 2446
BstMCI CGRYCG 4 cut(s) 17, 207, 299, 3027
BstNI CCWGG 1 cut(s) 1940
BstNSI RCATGY 3 cut(s) 1361, 1971, 2208
BstSCI CCNGG 2 cut(s) 1938, 2706
BstSFI CTRYAG 1 cut(s) 3112
BstSLI GKGCMC 3 cut(s) 1911, 2331, 2948
BstUI CGCG 1 cut(s) 2755
BstV1I GCAGC 8 cut(s) 171, 187, 241, 806, 1046, 1780, 2374, 2497
BstV2I GAAGAC 1 cut(s) 303
BstX2I RGATCY 2 cut(s) 2334, 2824
BstXI CCANNNNNNTGG 2 cut(s) 500, 1313
BstYI RGATCY 2 cut(s) 2334, 2824
BstZI CGGCCG 3 cut(s) 14, 296, 3024
BsuI GTATCC 2 cut(s) 173, 352
BsuRI GGCC 9 cut(s) 16, 77, 298, 769, 1085, 1442, 1494, 1694, 3026
BtsCI GGATG 1 cut(s) 3070
BtsI GCAGTG 4 cut(s) 411, 780, 816, 2272
BtsIMutI CAGTG 9 cut(s) 411, 780, 816, 1475, 1706, 2034, 2272, 2616, 2887
BveI ACCTGC 1 cut(s) 2128
Cac8I GCNNGC 7 cut(s) 345, 771, 798, 980, 1359, 2254, 2399
CaiI CAGNNNCTG 5 cut(s) 1126, 1223, 1774, 2351, 2486
CciI TCATGA 2 cut(s) 2104, 2970
CfoI GCGC 1 cut(s) 2755
Cfr10I RCCGGY 2 cut(s) 769, 3026
Cfr13I GGNCC 4 cut(s) 264, 1396, 1598, 2585
CseI GACGC 1 cut(s) 570
Csp6I GTAC 8 cut(s) 121, 961, 1565, 1798, 2178, 2367, 2842, 3043
CspCI CAANNNNNGTGG 2 cut(s) 2023, 2058
CviQI GTAC 8 cut(s) 121, 961, 1565, 1798, 2178, 2367, 2842, 3043
DraIII CACNNNGTG 1 cut(s) 2052
EaeI YGGCCR 5 cut(s) 14, 296, 767, 1492, 3024
EagI CGGCCG 3 cut(s) 14, 296, 3024
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
EciI GGCGGA 2 cut(s) 80, 121
EclXI CGGCCG 3 cut(s) 14, 296, 3024
Eco130I CCWWGG 2 cut(s) 1627, 2579
Eco147I AGGCCT 1 cut(s) 77
Eco24I GRGCYC 1 cut(s) 1217
Eco31I GGTCTC 1 cut(s) 2446
Eco32I GATATC 1 cut(s) 1984
Eco47I GGWCC 4 cut(s) 264, 1396, 1598, 2585
Eco52I CGGCCG 3 cut(s) 14, 296, 3024
Eco57I CTGAAG 3 cut(s) 968, 2407, 2478
Eco88I CYCGRG 1 cut(s) 288
EcoNI CCTNNNNNAGG 1 cut(s) 2013
EcoO109I RGGNCCY 1 cut(s) 1396
EcoRII CCWGG 1 cut(s) 1938
EcoRV GATATC 1 cut(s) 1984
EcoT14I CCWWGG 2 cut(s) 1627, 2579
EcoT38I GRGCYC 1 cut(s) 1217
ErhI CCWWGG 2 cut(s) 1627, 2579
FaqI GGGAC 2 cut(s) 2067, 2598
FauI CCCGC 1 cut(s) 2796
FauNDI CATATG 3 cut(s) 1286, 1578, 1883
FbaI TGATCA 3 cut(s) 462, 1179, 1878
FokI GGATG 1 cut(s) 3077
FriOI GRGCYC 1 cut(s) 1217
GlaI GCGC 1 cut(s) 2754
GsaI CCCAGC 1 cut(s) 639
GsuI CTGGAG 2 cut(s) 77, 786
HaeIII GGCC 9 cut(s) 16, 77, 298, 769, 1085, 1442, 1494, 1694, 3026
HapII CCGG 6 cut(s) 168, 770, 1495, 2707, 3027, 3062
HgaI GACGC 1 cut(s) 570
HhaI GCGC 1 cut(s) 2755
Hin6I GCGC 1 cut(s) 2753
HinP1I GCGC 1 cut(s) 2753
HincII GTYRAC 1 cut(s) 2044
HindII GTYRAC 1 cut(s) 2044
HindIII AAGCTT 1 cut(s) 2395
HpaII CCGG 6 cut(s) 168, 770, 1495, 2707, 3027, 3062
Hpy166II GTNNAC 8 cut(s) 971, 1244, 1598, 1821, 1909, 2044, 2329, 2946
Hpy8I GTNNAC 8 cut(s) 971, 1244, 1598, 1821, 1909, 2044, 2329, 2946
Hpy99I CGWCG 4 cut(s) 22, 178, 188, 586
HpyCH4IV ACGT 3 cut(s) 589, 2812, 3041
HpySE526I ACGT 3 cut(s) 589, 2812, 3041
HspAI GCGC 1 cut(s) 2753
KroI GCCGGC 1 cut(s) 769
KroNI GCCGGC 1 cut(s) 771
Ksp22I TGATCA 3 cut(s) 462, 1179, 1878
LmnI GCTCC 5 cut(s) 170, 632, 753, 805, 3109
Lsp1109I GCAGC 8 cut(s) 171, 187, 241, 806, 1046, 1780, 2374, 2497
LweI GCATC 5 cut(s) 1608, 2252, 2338, 2507, 2890
MaeII ACGT 3 cut(s) 589, 2812, 3041
MaeIII GTNAC 9 cut(s) 545, 1367, 1464, 1504, 1513, 1528, 1785, 2299, 3071
MbiI CCGCTC 2 cut(s) 2557, 2803
MfeI CAATTG 1 cut(s) 2953
MflI RGATCY 2 cut(s) 2334, 2824
MhlI GDGCHC 6 cut(s) 1217, 1407, 1911, 2331, 2627, 2948
MlyI GAGTC 6 cut(s) 197, 227, 1619, 2179, 2492, 2600
MmeI TCCRAC 1 cut(s) 2107
MroNI GCCGGC 1 cut(s) 769
MroXI GAANNNNTTC 2 cut(s) 488, 2417
MslI CAYNNNNRTG 3 cut(s) 1311, 2229, 2975
MspA1I CMGCKG 2 cut(s) 162, 232
MspI CCGG 6 cut(s) 168, 770, 1495, 2707, 3027, 3062
MspR9I CCNGG 2 cut(s) 1940, 2708
MunI CAATTG 1 cut(s) 2953
Mva1269I GAATGC 1 cut(s) 1922
MvaI CCWGG 1 cut(s) 1940
MvnI CGCG 1 cut(s) 2755
NaeI GCCGGC 1 cut(s) 771
NciI CCSGG 1 cut(s) 2708
NdeI CATATG 3 cut(s) 1286, 1578, 1883
NgoMIV GCCGGC 1 cut(s) 769
NlaIV GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
NmuCI GTSAC 3 cut(s) 1367, 1504, 3071
NspI RCATGY 3 cut(s) 1361, 1971, 2208
PacI TTAATTAA 1 cut(s) 2934
PaeI GCATGC 1 cut(s) 1361
PaeR7I CTCGAG 1 cut(s) 288
PagI TCATGA 2 cut(s) 2104, 2970
PceI AGGCCT 1 cut(s) 77
PciI ACATGT 1 cut(s) 2204
PcsI WCGNNNNNNNCGW 2 cut(s) 95, 581
PctI GAATGC 1 cut(s) 1922
PdiI GCCGGC 1 cut(s) 771
PdmI GAANNNNTTC 2 cut(s) 488, 2417
Pfl23II CGTACG 1 cut(s) 3042
PfoI TCCNGGA 1 cut(s) 1938
PleI GAGTC 6 cut(s) 196, 226, 1618, 2179, 2491, 2600
PpsI GAGTC 6 cut(s) 196, 226, 1618, 2179, 2491, 2600
PpuMI RGGWCCY 1 cut(s) 1396
PscI ACATGT 1 cut(s) 2204
Psp5II RGGWCCY 1 cut(s) 1396
Psp6I CCWGG 1 cut(s) 1938
PspFI CCCAGC 1 cut(s) 635
PspGI CCWGG 1 cut(s) 1938
PspLI CGTACG 1 cut(s) 3042
PspN4I GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
PspPI GGNCC 4 cut(s) 264, 1396, 1598, 2585
PspPPI RGGWCCY 1 cut(s) 1396
PspXI VCTCGAGB 1 cut(s) 288
PsrI GAACNNNNNNTAC 2 cut(s) 1728, 1760
PstNI CAGNNNCTG 5 cut(s) 1126, 1223, 1774, 2351, 2486
PsuI RGATCY 2 cut(s) 2334, 2824
RsaI GTAC 8 cut(s) 122, 962, 1566, 1799, 2179, 2368, 2843, 3044
RsaNI GTAC 8 cut(s) 121, 961, 1565, 1798, 2178, 2367, 2842, 3043
RseI CAYNNNNRTG 3 cut(s) 1311, 2229, 2975
Sau96I GGNCC 4 cut(s) 264, 1396, 1598, 2585
SchI GAGTC 6 cut(s) 197, 227, 1619, 2179, 2492, 2600
ScrFI CCNGG 2 cut(s) 1940, 2708
SduI GDGCHC 6 cut(s) 1217, 1407, 1911, 2331, 2627, 2948
SfaNI GCATC 5 cut(s) 1608, 2252, 2338, 2507, 2890
SfcI CTRYAG 1 cut(s) 3112
Sfr274I CTCGAG 1 cut(s) 288
SinI GGWCC 4 cut(s) 264, 1396, 1598, 2585
SlaI CTCGAG 1 cut(s) 288
SmiMI CAYNNNNRTG 3 cut(s) 1311, 2229, 2975
SmlI CTYRAG 3 cut(s) 288, 932, 2620
SmoI CTYRAG 3 cut(s) 288, 932, 2620
SphI GCATGC 1 cut(s) 1361
SseBI AGGCCT 1 cut(s) 77
SspI AATATT 3 cut(s) 497, 1277, 2764
StuI AGGCCT 1 cut(s) 77
StyD4I CCNGG 2 cut(s) 1938, 2706
StyI CCWWGG 2 cut(s) 1627, 2579
TaiI ACGT 3 cut(s) 592, 2815, 3044
TatI WGTACW 1 cut(s) 960
TauI GCSGC 7 cut(s) 16, 165, 247, 301, 654, 709, 2560
TscAI CASTG 9 cut(s) 411, 780, 816, 1475, 1713, 2041, 2279, 2616, 2887
TseFI GTSAC 3 cut(s) 1367, 1504, 3071
TseI GCWGC 8 cut(s) 159, 200, 229, 819, 1034, 1768, 2387, 2510
Tsp45I GTSAC 3 cut(s) 1367, 1504, 3071
TspRI CASTG 9 cut(s) 411, 780, 816, 1475, 1713, 2041, 2279, 2616, 2887
VneI GTGCAC 3 cut(s) 1907, 2327, 2944
VpaK11BI GGWCC 4 cut(s) 264, 1396, 1598, 2585
XagI CCTNNNNNAGG 1 cut(s) 2013
XapI RAATTY 8 cut(s) 37, 223, 571, 598, 1374, 2539, 2652, 3119
XceI RCATGY 3 cut(s) 1361, 1971, 2208
XcmI CCANNNNNNNNNTGG 3 cut(s) 1313, 1919, 2285
XhoI CTCGAG 1 cut(s) 288
XmnI GAANNNNTTC 2 cut(s) 488, 2417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.