Rh1AG284200
ERF Family

Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0003180
Physical Location & Seq
Reverse (-)
51263506 .. 51271808
8303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG284200.1

Sequence Viewer

Length: 2940 bp
ATGATAATTAAGCGGCCGTCGAGATTTGAAATGCCGAATTTGAAACGGTGTAAGCTGGAGGAGGCGGAAGCTAAAGCCTATGCGTATTCGGCGAATCCGAAGAGGCGGAAAGCGAATGGGTACTGCGCAGTTGGCAATGGCGAGGGGGAGGATTTGAGCAGCGGCTCCGGTTCGTCGGGATACGACGAGTCGTTTGCGGCTGCGGTCGAGGTGGTGGAGTCGAATTTGCAGCGGTTGAGTAAGCGGCGAGAAATGAATCGGAGGTCCGAGAAGTTGAGGAGGTCTGCTCGAGGACGGCCGCAAGTGCCCTCTTCGAGGTTTAACGGTTCAGGTGAGAAAAAGCAAGCGAAATATGTAGATACATATACGGTTTTTGAAGATGAAGAAGAATGTGATGTTTTAGCAGTGGAGGACAGAGAAGGGATTGAGAAATTGGGTTTTGTTAAAAAGCGTAAGGAGGATATCAATGGGTTTAAGAAGTTGAAGAAGTTCCAATATTGTGGGAAGGTAGAGCAAGAAGAAGTGGATTATTACGATGATATTGGTTACAGACAGTATATGGGTTTGAAAAATTCGATAGCGTCGAAACGTGGTGGAAATTCTTTGCCAGAGGAAAGAAGTGAGGAATATGGAGCTGGGTTTAGTTTTGGCGGCAAGGAGAAAGTTCACAAACCCGACTGTGCAAAGAAGAAAGAAGTGTATAAGCCGCAGGACTTTGCTTTGGGTGATATTGTTTGGGCTAAGTGTGGGAGGAGCTACCCAGTTTGGCCGGCAGTGGTTATTGACCCCATATTGCAAGCTCCAGAAGCAGTGTTGAGCTGCTGTATTCCTAATGCTATCTGTGTCATGTTCTTTGGGTTCTCAAAGAATGGAACACAAAGGGATTATGGGTGGGTGAAGCAGGGAATGATATATCCGTTCAAGCAGTTCCTTGAGAGATTTCGAGGACAGACCCAGTTGTACAGGAGTAAACCAAGCGAGCTTCAGATGGCAATAGAGGAGGCGGTGTTAGCAGAAAATGGCTTTATTTACACAGCTTGTAAAACTACTGATTCAGAGGCAAATGCCCCTGAAATCCAAGAGGCCACAGATTTTTATCAAGATCAGGCATATTACAGTCAGAATCTGAATCAGGAAGCATATCAGAAGGACACAAGACCTTGTGATTGCTGTGGTTTGATCACTCCATCTAAAGCTATGAAAAAAGTGAAGGGCTCAGGTTCTGAAACCCAAGTTTTATGTAAACATTGTGCAAAGTTGAAAAAATCAAGACAATATTGTGGTATATGTAAGAAGATATGGCACCATTCAGATGGTGGAGATTGGGTATGCTGTGATGGCTGTAATGTATGGGTGCATGCTGAGTGTGACAAAATTTCCAGTAAAGTTTTCAAGGACCCAGAGCACATTGATTACTATTGTCCTGATTGCAAAAATAAGGCCAAAGGTGAAATGTTAGATGAGTTACAGTGTCGGCAAAAACACAGTTCTGGCCGGAAATCTGTGACTGGCGTAACTGTGTCTGAGGTAACTGTGGTTTGTAATGGCATGGAAGGAACTTATGTACCAAACCTTCATATGGTTGCTTGTAAGTGTGGACCCTGTGATGAGTCAAAGATGCAGAGCCTTGGTGAATGGGAAAGGCACACAGGTTGTAGAGCAAAAAAATGGAAGCATAGTGTGAAAGTGAAGGCCACAATGCTAACACTGGAACAATGGATTGCAGAGTATAATGAACATGGCTTACAGCCTCTCAAATTAGATAAGCAGCGACTACTTGATTCCTTACAAGAAAAGTACGAGCCAGTTAATGCAAAGTGGACAAGTGAAAGATGTGCAGTTTGTAGATGGGTTGAAGATTGGGAAGATAACAAAATGATCATATGCAACAGGTGTCAAATAGCTGTGCACCAAGAATGCTATGGTGCAAAAGATGTCCAGGATTTTACTTCATGGGTTTGTAGAGCATGTGAAACACCTGATATCATTAAAGAATGTTGTCTCTGTCCTGTAAAAGGAGGTGCTTTGAAGCCCACTGATGTTGACACCTTGTGGGTTCATGTCTCTTGTGCTTGGTTTCGTCCCGAAGTAGGTTTCTTGAATCATGAGAAGATGGAACCTGCTGTTGGAATCCTTAGAATCCCACCCACTACTTTTATGAAGCGTTGCGTAATTTGTACGCAGACTCATGGTTCCTGCACCACATGTTGCAAATGTGCCACTCATTTTCATGCAACCTGTGCATCAAGAGCAGGCTACAACATGGAATTGCACTGCCAAGAGAGGAATGGGAAACAAGTCACAACAAAGATGATATATTGTGCTGTGCACAGGACCCCTAATCCAGATGCTGTTGTTGTTGTTCGTACTCCTTCGGGGCTTTTTGCTGCCAGAAGCTTGCTTCAAAACGAGAAAGGGTTCTTCAGGGGTTCGAGGGTGGTCTCATCAAAGAGGACTGAAGTTCCAGAACCTTCAACCTCAGAGTCTGATGAGTTAGAACCACTCTCTGCTGCAAGATGCCGTGCTATTAAAAGATCAAATTTTAAGGGAGGTGAGCGGCTACCAATTTTTCATCGACCAAGGGGACCAACACATCATTCATTAGACTCAGTGAATAGCTTGAGCACATTTATAGAAGTAGAAGATTCTAAAATTTTTTCTTCCTTCAAGGATCGGCTTTACCACTTGCAGAAAACTGAAAATCACCGGGTTTGTTTTGGTAAATCTGGAATACATGGATGGGGTCTATTTGCGCGTAGGAATATTCAAGAAGGAGAAATGGTTGTTGAGTATCGTGGTGAGCGGGTAAGACGTAGTGTTGCAGATCTGAGGGAAGCACGGTACAGGCTACAAGGCAAAGATTGCTATGTAAGTCGATTTTTCAGTATACTCCTATGTTTCTATGTATGCAGTATACATTATCTTGGGAGTAGCTTATGA

Protein Analysis

979

Amino Acids

111.21

Weight (kDa)

8.68

Isoelectric Point (pI)

48.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 242 - 337 6.7e-15 PWWP domain
PHD PF00628 427 - 477 6.2e-07 PHD-finger
PHD PF00628 612 - 657 8.8e-06 PHD-finger
PHD_2 PF13831 624 - 658 1.3e-12 PHD-finger
zf-HC5HC2H_2 PF13832 665 - 777 3.9e-26 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 687 - 778 1.1e-10 PHD-like zinc-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 127
Acc36I ACCTGC 1 cut(s) 2128
AccB1I GGYRCC 1 cut(s) 1302
AccBSI CCGCTC 2 cut(s) 2557, 2803
AccI GTMKAC 2 cut(s) 2887, 2914
AccII CGCG 1 cut(s) 2755
AclWI GGATC 1 cut(s) 2679
AcoI YGGCCR 4 cut(s) 14, 296, 767, 1492
AcsI RAATTY 7 cut(s) 37, 223, 571, 598, 1374, 2539, 2652
AcuI CTGAAG 3 cut(s) 968, 2407, 2478
AdeI CACNNNGTG 1 cut(s) 2052
AfaI GTAC 7 cut(s) 122, 962, 1566, 1799, 2179, 2368, 2843
AfiI CCNNNNNNNGG 5 cut(s) 315, 1579, 2015, 2090, 2126
AflIII ACRYGT 1 cut(s) 2204
AjnI CCWGG 1 cut(s) 1938
AjuI GAANNNNNNNTTGG 4 cut(s) 2109, 2141, 2581, 2613
Alw21I GWGCWC 4 cut(s) 1407, 1911, 2331, 2627
Alw26I GTCTC 3 cut(s) 2006, 2068, 2446
Alw44I GTGCAC 2 cut(s) 1907, 2327
AlwI GGATC 1 cut(s) 2679
AlwNI CAGNNNCTG 4 cut(s) 1126, 1223, 2351, 2486
Ama87I CYCGRG 1 cut(s) 288
AoxI GGCC 7 cut(s) 14, 296, 767, 1083, 1440, 1492, 1692
ApaLI GTGCAC 2 cut(s) 1907, 2327
ApeKI GCWGC 7 cut(s) 159, 200, 229, 819, 1768, 2387, 2510
ApoI RAATTY 7 cut(s) 37, 223, 571, 598, 1374, 2539, 2652
ArsI GACNNNNNNTTYG 2 cut(s) 176, 208
Asp700I GAANNNNTTC 2 cut(s) 488, 2417
AspLEI GCGC 2 cut(s) 128, 2755
AspS9I GGNCC 5 cut(s) 264, 1396, 1598, 2334, 2585
AsuC2I CCSGG 1 cut(s) 2708
AsuHPI GGTGA 8 cut(s) 344, 737, 907, 1460, 1643, 2564, 2696, 2810
AvaI CYCGRG 1 cut(s) 288
AvaII GGWCC 5 cut(s) 264, 1396, 1598, 2334, 2585
BaeGI GKGCMC 3 cut(s) 309, 1911, 2331
BaeI ACNNNNGTAYC 2 cut(s) 1548, 1581
BanI GGYRCC 1 cut(s) 1302
BanII GRGCYC 1 cut(s) 1217
BarI GAAGNNNNNNTAC 2 cut(s) 1557, 1589
Bbv12I GWGCWC 4 cut(s) 1407, 1911, 2331, 2627
BbvI GCAGC 7 cut(s) 171, 187, 241, 806, 1780, 2374, 2497
BccI CCATC 7 cut(s) 982, 1195, 1307, 1331, 1842, 2107, 2733
BceAI ACGGC 2 cut(s) 311, 2505
BcgI CGANNNNNNTGC 2 cut(s) 176, 210
BciT130I CCWGG 1 cut(s) 1940
BciVI GTATCC 1 cut(s) 173
BclI TGATCA 2 cut(s) 1179, 1878
BcnI CCSGG 1 cut(s) 2708
BcoDI GTCTC 3 cut(s) 2006, 2068, 2446
BfuAI ACCTGC 1 cut(s) 2128
BfuI GTATCC 1 cut(s) 173
BglII AGATCT 1 cut(s) 2824
Bme1390I CCNGG 2 cut(s) 1940, 2708
Bme18I GGWCC 5 cut(s) 264, 1396, 1598, 2334, 2585
BmeT110I CYCGRG 1 cut(s) 288
BmgT120I GGNCC 5 cut(s) 264, 1396, 1598, 2334, 2585
BmiI GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
BmrFI CCNGG 2 cut(s) 1940, 2708
BmrI ACTGGG 2 cut(s) 755, 949
BmsI GCATC 4 cut(s) 1608, 2252, 2338, 2507
BmuI ACTGGG 2 cut(s) 755, 949
BplI GAGNNNNNCTC 2 cut(s) 271, 303
BpmI CTGGAG 2 cut(s) 77, 786
Bpu10I CCTNAGC 1 cut(s) 1216
BpuEI CTTGAG 2 cut(s) 953, 2641
BpuMI CCSGG 1 cut(s) 2708
BsaBI GATNNNNATC 1 cut(s) 1095
BsaI GGTCTC 1 cut(s) 2446
BsaJI CCNNGG 2 cut(s) 1627, 2579
BsaWI WCCGGW 1 cut(s) 167
BsaXI ACNNNNNCTCC 6 cut(s) 992, 1022, 1311, 1341, 2766, 2796
Bsc4I CCNNNNNNNGG 5 cut(s) 315, 1579, 2015, 2090, 2126
Bse118I RCCGGY 1 cut(s) 769
Bse1I ACTGG 6 cut(s) 761, 955, 1380, 1513, 1713, 1805
Bse3DI GCAATG 1 cut(s) 142
Bse8I GATNNNNATC 1 cut(s) 1095
BseBI CCWGG 1 cut(s) 1940
BseDI CCNNGG 2 cut(s) 1627, 2579
BseGI GGATG 1 cut(s) 2744
BseJI GATNNNNATC 1 cut(s) 1095
BseLI CCNNNNNNNGG 5 cut(s) 315, 1579, 2015, 2090, 2126
BseMI GCAATG 1 cut(s) 142
BseMII CTCAG 6 cut(s) 1230, 1353, 1515, 2493, 2622, 2819
BseNI ACTGG 6 cut(s) 761, 955, 1380, 1513, 1713, 1805
BseRI GAGGAG 4 cut(s) 74, 292, 766, 1013
BseSI GKGCMC 3 cut(s) 309, 1911, 2331
BseX3I CGGCCG 2 cut(s) 14, 296
BseXI GCAGC 7 cut(s) 171, 187, 241, 806, 1780, 2374, 2497
BseYI CCCAGC 1 cut(s) 635
BsgI GTGCAG 2 cut(s) 1857, 2182
Bsh1236I CGCG 1 cut(s) 2755
Bsh1285I CGRYCG 3 cut(s) 17, 207, 299
BshFI GGCC 7 cut(s) 16, 298, 769, 1085, 1442, 1494, 1694
BshNI GGYRCC 1 cut(s) 1302
BsiEI CGRYCG 3 cut(s) 17, 207, 299
BsiHKAI GWGCWC 4 cut(s) 1407, 1911, 2331, 2627
BsiHKCI CYCGRG 1 cut(s) 288
BsiSI CCGG 4 cut(s) 168, 770, 1495, 2707
BslFI GGGAC 2 cut(s) 2067, 2598
BslI CCNNNNNNNGG 5 cut(s) 315, 1579, 2015, 2090, 2126
BsmAI GTCTC 3 cut(s) 2006, 2068, 2446
BsmFI GGGAC 2 cut(s) 2067, 2598
BsmI GAATGC 1 cut(s) 1922
BsnI GGCC 7 cut(s) 16, 298, 769, 1085, 1442, 1494, 1694
Bso31I GGTCTC 1 cut(s) 2446
BsoBI CYCGRG 1 cut(s) 288
Bsp1286I GDGCHC 6 cut(s) 309, 1217, 1407, 1911, 2331, 2627
Bsp1407I TGTACA 1 cut(s) 960
Bsp143I GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
BspANI GGCC 7 cut(s) 16, 298, 769, 1085, 1442, 1494, 1694
BspCNI CTCAG 6 cut(s) 1229, 1354, 1516, 2492, 2621, 2820
BspFNI CGCG 1 cut(s) 2755
BspHI TCATGA 1 cut(s) 2104
BspLI GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
BspMI ACCTGC 1 cut(s) 2128
BspPI GGATC 1 cut(s) 2679
BspT107I GGYRCC 1 cut(s) 1302
BspTNI GGTCTC 1 cut(s) 2446
BsrBI CCGCTC 2 cut(s) 2557, 2803
BsrDI GCAATG 1 cut(s) 142
BsrFI RCCGGY 1 cut(s) 769
BsrGI TGTACA 1 cut(s) 960
BsrI ACTGG 6 cut(s) 761, 955, 1380, 1513, 1713, 1805
BssAI RCCGGY 1 cut(s) 769
BssECI CCNNGG 2 cut(s) 1627, 2579
BssMI GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
BssNAI GTATAC 2 cut(s) 2888, 2915
BssT1I CCWWGG 2 cut(s) 1627, 2579
Bst1107I GTATAC 2 cut(s) 2888, 2915
Bst2UI CCWGG 1 cut(s) 1940
Bst6I CTCTTC 2 cut(s) 95, 316
BstAPI GCANNNNNTGC 2 cut(s) 2240, 2862
BstAUI TGTACA 1 cut(s) 960
BstC8I GCNNGC 7 cut(s) 345, 771, 798, 980, 1359, 2254, 2399
BstDEI CTNAG 8 cut(s) 741, 1216, 1362, 1524, 2135, 2479, 2608, 2828
BstENI CCTNNNNNAGG 2 cut(s) 313, 2013
BstF5I GGATG 1 cut(s) 2744
BstFNI CGCG 1 cut(s) 2755
BstHHI GCGC 2 cut(s) 128, 2755
BstKTI GATC 6 cut(s) 1105, 1182, 1881, 2537, 2674, 2827
BstMAI GTCTC 3 cut(s) 2006, 2068, 2446
BstMBI GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
BstMCI CGRYCG 3 cut(s) 17, 207, 299
BstMWI GCNNNNNNNGC 9 cut(s) 89, 132, 304, 806, 1010, 1338, 2240, 2249, 2862
BstNI CCWGG 1 cut(s) 1940
BstNSI RCATGY 3 cut(s) 1361, 1971, 2208
BstSCI CCNGG 2 cut(s) 1938, 2706
BstSLI GKGCMC 3 cut(s) 309, 1911, 2331
BstUI CGCG 1 cut(s) 2755
BstV1I GCAGC 7 cut(s) 171, 187, 241, 806, 1780, 2374, 2497
BstX2I RGATCY 1 cut(s) 2824
BstXI CCANNNNNNTGG 2 cut(s) 500, 1313
BstYI RGATCY 1 cut(s) 2824
BstZ17I GTATAC 2 cut(s) 2888, 2915
BstZI CGGCCG 2 cut(s) 14, 296
BsuI GTATCC 1 cut(s) 173
BsuRI GGCC 7 cut(s) 16, 298, 769, 1085, 1442, 1494, 1694
BtsCI GGATG 1 cut(s) 2744
BtsI GCAGTG 4 cut(s) 411, 780, 816, 2272
BtsIMutI CAGTG 8 cut(s) 411, 780, 816, 1475, 1706, 2034, 2272, 2616
BveI ACCTGC 1 cut(s) 2128
Cac8I GCNNGC 7 cut(s) 345, 771, 798, 980, 1359, 2254, 2399
CaiI CAGNNNCTG 4 cut(s) 1126, 1223, 2351, 2486
CciI TCATGA 1 cut(s) 2104
CfoI GCGC 2 cut(s) 128, 2755
Cfr10I RCCGGY 1 cut(s) 769
Cfr13I GGNCC 5 cut(s) 264, 1396, 1598, 2334, 2585
CseI GACGC 1 cut(s) 570
Csp6I GTAC 7 cut(s) 121, 961, 1565, 1798, 2178, 2367, 2842
CspCI CAANNNNNGTGG 2 cut(s) 2023, 2058
CviQI GTAC 7 cut(s) 121, 961, 1565, 1798, 2178, 2367, 2842
DdeI CTNAG 8 cut(s) 741, 1216, 1362, 1524, 2135, 2479, 2608, 2828
DpnI GATC 6 cut(s) 1104, 1181, 1880, 2536, 2673, 2826
DpnII GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
DraIII CACNNNGTG 1 cut(s) 2052
EaeI YGGCCR 4 cut(s) 14, 296, 767, 1492
EagI CGGCCG 2 cut(s) 14, 296
Eam1104I CTCTTC 2 cut(s) 95, 316
EarI CTCTTC 2 cut(s) 95, 316
EciI GGCGGA 2 cut(s) 80, 121
EclXI CGGCCG 2 cut(s) 14, 296
Eco130I CCWWGG 2 cut(s) 1627, 2579
Eco24I GRGCYC 1 cut(s) 1217
Eco31I GGTCTC 1 cut(s) 2446
Eco32I GATATC 2 cut(s) 463, 1984
Eco47I GGWCC 5 cut(s) 264, 1396, 1598, 2334, 2585
Eco52I CGGCCG 2 cut(s) 14, 296
Eco57I CTGAAG 3 cut(s) 968, 2407, 2478
Eco88I CYCGRG 1 cut(s) 288
EcoNI CCTNNNNNAGG 2 cut(s) 313, 2013
EcoO109I RGGNCCY 2 cut(s) 1396, 2334
EcoRII CCWGG 1 cut(s) 1938
EcoRV GATATC 2 cut(s) 463, 1984
EcoT14I CCWWGG 2 cut(s) 1627, 2579
EcoT38I GRGCYC 1 cut(s) 1217
ErhI CCWWGG 2 cut(s) 1627, 2579
FaqI GGGAC 2 cut(s) 2067, 2598
FauI CCCGC 1 cut(s) 2796
FauNDI CATATG 2 cut(s) 1578, 1883
FbaI TGATCA 2 cut(s) 1179, 1878
FblI GTMKAC 2 cut(s) 2887, 2914
FokI GGATG 1 cut(s) 2751
FriOI GRGCYC 1 cut(s) 1217
FspI TGCGCA 1 cut(s) 127
GlaI GCGC 2 cut(s) 127, 2754
GsaI CCCAGC 1 cut(s) 639
GsuI CTGGAG 2 cut(s) 77, 786
HaeIII GGCC 7 cut(s) 16, 298, 769, 1085, 1442, 1494, 1694
HapII CCGG 4 cut(s) 168, 770, 1495, 2707
HgaI GACGC 1 cut(s) 570
HhaI GCGC 2 cut(s) 128, 2755
Hin6I GCGC 2 cut(s) 126, 2753
HinP1I GCGC 2 cut(s) 126, 2753
HincII GTYRAC 1 cut(s) 2044
HindII GTYRAC 1 cut(s) 2044
HindIII AAGCTT 1 cut(s) 2395
HpaII CCGG 4 cut(s) 168, 770, 1495, 2707
HphI GGTGA 8 cut(s) 344, 737, 907, 1460, 1643, 2564, 2696, 2810
Hpy99I CGWCG 4 cut(s) 22, 178, 188, 586
HpyCH4IV ACGT 2 cut(s) 589, 2812
HpyF10VI GCNNNNNNNGC 9 cut(s) 89, 132, 304, 806, 1010, 1338, 2240, 2249, 2862
HpyF3I CTNAG 8 cut(s) 741, 1216, 1362, 1524, 2135, 2479, 2608, 2828
HpySE526I ACGT 2 cut(s) 589, 2812
HspAI GCGC 2 cut(s) 126, 2753
KroI GCCGGC 1 cut(s) 769
KroNI GCCGGC 1 cut(s) 771
Ksp22I TGATCA 2 cut(s) 1179, 1878
Kzo9I GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
LmnI GCTCC 4 cut(s) 170, 632, 753, 805
Lsp1109I GCAGC 7 cut(s) 171, 187, 241, 806, 1780, 2374, 2497
LweI GCATC 4 cut(s) 1608, 2252, 2338, 2507
MaeII ACGT 2 cut(s) 589, 2812
MaeIII GTNAC 7 cut(s) 545, 1367, 1464, 1504, 1513, 1528, 2299
MalI GATC 6 cut(s) 1104, 1181, 1880, 2536, 2673, 2826
MbiI CCGCTC 2 cut(s) 2557, 2803
MboI GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
MflI RGATCY 1 cut(s) 2824
MhlI GDGCHC 6 cut(s) 309, 1217, 1407, 1911, 2331, 2627
MlyI GAGTC 6 cut(s) 197, 227, 1619, 2179, 2492, 2600
MmeI TCCRAC 1 cut(s) 2107
MroNI GCCGGC 1 cut(s) 769
MroXI GAANNNNTTC 2 cut(s) 488, 2417
MseI TTAA 8 cut(s) 9, 321, 444, 474, 1809, 1989, 2529, 2544
MslI CAYNNNNRTG 2 cut(s) 1311, 2229
MspA1I CMGCKG 2 cut(s) 162, 232
MspI CCGG 4 cut(s) 168, 770, 1495, 2707
MspR9I CCNGG 2 cut(s) 1940, 2708
Mva1269I GAATGC 1 cut(s) 1922
MvaI CCWGG 1 cut(s) 1940
MvnI CGCG 1 cut(s) 2755
MwoI GCNNNNNNNGC 9 cut(s) 89, 132, 304, 806, 1010, 1338, 2240, 2249, 2862
NaeI GCCGGC 1 cut(s) 771
NciI CCSGG 1 cut(s) 2708
NdeI CATATG 2 cut(s) 1578, 1883
NdeII GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
NgoMIV GCCGGC 1 cut(s) 769
NlaIV GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
NmuCI GTSAC 3 cut(s) 1367, 1504, 2299
NsbI TGCGCA 1 cut(s) 127
NspI RCATGY 3 cut(s) 1361, 1971, 2208
PaeI GCATGC 1 cut(s) 1361
PaeR7I CTCGAG 1 cut(s) 288
PagI TCATGA 1 cut(s) 2104
PciI ACATGT 1 cut(s) 2204
PcsI WCGNNNNNNNCGW 2 cut(s) 95, 581
PctI GAATGC 1 cut(s) 1922
PdiI GCCGGC 1 cut(s) 771
PdmI GAANNNNTTC 2 cut(s) 488, 2417
PfoI TCCNGGA 1 cut(s) 1938
PleI GAGTC 6 cut(s) 196, 226, 1618, 2179, 2491, 2600
PpsI GAGTC 6 cut(s) 196, 226, 1618, 2179, 2491, 2600
PpuMI RGGWCCY 2 cut(s) 1396, 2334
PscI ACATGT 1 cut(s) 2204
Psp5II RGGWCCY 2 cut(s) 1396, 2334
Psp6I CCWGG 1 cut(s) 1938
PspFI CCCAGC 1 cut(s) 635
PspGI CCWGG 1 cut(s) 1938
PspN4I GGNNCC 8 cut(s) 166, 1304, 1398, 1600, 2118, 2194, 2336, 2586
PspPI GGNCC 5 cut(s) 264, 1396, 1598, 2334, 2585
PspPPI RGGWCCY 2 cut(s) 1396, 2334
PspXI VCTCGAGB 1 cut(s) 288
PsrI GAACNNNNNNTAC 2 cut(s) 1728, 1760
PstNI CAGNNNCTG 4 cut(s) 1126, 1223, 2351, 2486
PsuI RGATCY 1 cut(s) 2824
RsaI GTAC 7 cut(s) 122, 962, 1566, 1799, 2179, 2368, 2843
RsaNI GTAC 7 cut(s) 121, 961, 1565, 1798, 2178, 2367, 2842
RseI CAYNNNNRTG 2 cut(s) 1311, 2229
SaqAI TTAA 8 cut(s) 9, 321, 444, 474, 1809, 1989, 2529, 2544
Sau3AI GATC 6 cut(s) 1102, 1179, 1878, 2534, 2671, 2824
Sau96I GGNCC 5 cut(s) 264, 1396, 1598, 2334, 2585
SchI GAGTC 6 cut(s) 197, 227, 1619, 2179, 2492, 2600
ScrFI CCNGG 2 cut(s) 1940, 2708
SduI GDGCHC 6 cut(s) 309, 1217, 1407, 1911, 2331, 2627
SfaNI GCATC 4 cut(s) 1608, 2252, 2338, 2507
Sfr274I CTCGAG 1 cut(s) 288
SinI GGWCC 5 cut(s) 264, 1396, 1598, 2334, 2585
SlaI CTCGAG 1 cut(s) 288
SmiMI CAYNNNNRTG 2 cut(s) 1311, 2229
SmlI CTYRAG 3 cut(s) 288, 932, 2620
SmoI CTYRAG 3 cut(s) 288, 932, 2620
SphI GCATGC 1 cut(s) 1361
SspI AATATT 3 cut(s) 497, 1277, 2764
StyD4I CCNGG 2 cut(s) 1938, 2706
StyI CCWWGG 2 cut(s) 1627, 2579
TaiI ACGT 2 cut(s) 592, 2815
TatI WGTACW 1 cut(s) 960
TauI GCSGC 8 cut(s) 16, 165, 200, 247, 301, 654, 709, 2560
Tru1I TTAA 8 cut(s) 9, 321, 444, 474, 1809, 1989, 2529, 2544
Tru9I TTAA 8 cut(s) 9, 321, 444, 474, 1809, 1989, 2529, 2544
TscAI CASTG 8 cut(s) 411, 780, 816, 1475, 1713, 2041, 2279, 2616
TseFI GTSAC 3 cut(s) 1367, 1504, 2299
TseI GCWGC 7 cut(s) 159, 200, 229, 819, 1768, 2387, 2510
Tsp45I GTSAC 3 cut(s) 1367, 1504, 2299
TspGWI ACGGA 1 cut(s) 906
TspRI CASTG 8 cut(s) 411, 780, 816, 1475, 1713, 2041, 2279, 2616
VneI GTGCAC 2 cut(s) 1907, 2327
VpaK11BI GGWCC 5 cut(s) 264, 1396, 1598, 2334, 2585
XagI CCTNNNNNAGG 2 cut(s) 313, 2013
XapI RAATTY 7 cut(s) 37, 223, 571, 598, 1374, 2539, 2652
XceI RCATGY 3 cut(s) 1361, 1971, 2208
XcmI CCANNNNNNNNNTGG 3 cut(s) 1313, 1919, 2285
XhoI CTCGAG 1 cut(s) 288
XmiI GTMKAC 2 cut(s) 2887, 2914
XmnI GAANNNNTTC 2 cut(s) 488, 2417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.