Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003180

Physical Location & Seq

Genomic Coordinates Forward (+)

62056695 .. 62058659

Gene Structure 1965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00126700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGAATCAGAGCTCTGACAAGTTTGGGAGGTCAGCTCGAGGTTGCCGGCCGCAAACGCCGTCTTCAGTTGATTTATATGAGAAAAAGCAAGCTAAAGCTATGAAAAAAGTGAAGGGCTCAGGTTCTGAAACCCAAGTTTTATGGAAATATTGTGCAAAGTTGAAAAAATCAAAACAACATTGTGGCATATGTAAGAAGATAGGGCATCATTCAAATGGTGCAGATTGGGTGCATGCTGAGCGTGACAAAATTTCAAGTAAAGTTTTCAAGGACCTGGAGCACATTGATTGCAAAAATGAGGAATGTAAATCGTCAGATGTGGTACAGTGTCCCAGTTCTGTGGCAATTGGCCGAGAATCTGTGACCGGCGTAACCGTAGTTTGTAACGGCATGGAAGGAACATATGTACCAAGCCTTCATATGGTTGCCTGTAAGTGTGGAGCGTGTGATGAGTCAAAGATGCGGAGCCTTGGCGAATGGGAAAGGCACTCTGGTTGTAGAGCAAAAAAATGGAAGCATAGTGTGAGAGTGAAGGCCACAATGCTAACACTGGAACAATGGATTGCAGAGTATAATGAGCTTGGTTTAGATAAGCAGCAACTACTTGATTCCTTACGAGAAAAGTACGAGCCAGTTGACGCAAAGTGGACAAGTGAAAGATGTGCAGTTTGTAGATGGGTTGAAGATTGGGAAGACAACAAAATGATCATATGCAACAGGTGTCAAATAGCCGTGCACCAAGAATGCTATGGTGCAAAACATGTCCAGGATTTTACTTCATGGGTTTGTAGAGCATGTGAAACACCTGATATCATTAGAGAGTGTTGTCTCTGTCCTGTAAAAGGAGGTGCTTTGAAGCCCACTGATGTTGACACCTTGTGGGTTCATGTCTCTTGTGCTTGGTTTCATCCCGAAATAGGTTTCTTGAATCATGAGAAGATGGAACCTGCTGTTGGAATCCTTAGAATCCCACCCACTACTTTTCTGAAGCGTTGTGTAATTTGTACGCAGACTCATGGTTCCTGCACCACATGTTGCAAATGTGCCACTCATTTTCATGCAACCTGTGCATCAAGAGCAGGCTACAGCATGGAGTTACACTGCCAGGTGGGGAAGAATGGGAAACAAGTAACAACCAAATTGATATATTGTGCGGTGCACAGGACTCCCAATCCAGAAGCTGTTATCGTTGTTCATACTCCTTCAGGGGTTTTTGCTGCCAGAAGCTTGCTTCGAAACGAGAAAGGGTTCTTCAGGGGTTCGAGGGTGGTGTCATCAAAGAAAACTGAAGTTTCAGAACCTTCAACCTCAGAGTCTTATGAGTTAGAACCAGTACCCTCTGCTGCAAGATGCCGTGCTATTAAAAGATCAAATTTTAAGGGAGGTGAGCGGCTACCAATTTTTCATCGACCAAGGGGACCAACACACCATTCATTAGACGAAGTAAATAGCTTGAGCACATTTAAAGAAGTAGAAGATTCTAAAAATTTTTCTTCGTTCAAGGATCGGCTTCACCACTTGCAGAAAACTGAAAATCACCGGGTTTGTTTTGGTAAATCTGGAATACATGGATGGGGTCTATTTGCACGTAGGAATATTCAAGAAGGAGAAATGGTTGTTGAGTATCGTGGTGAGCGGGTAAGACGTAGCATTGCAGATCTGAGGGAAGCACGGTACAGGCAACAAGGCAAAGATTGCTACCTTTTCAAGATCAGCGAGGAAGTAGTAATTGATGCTACATGTAAAGGAAATGTAGCACGGTTAATTAACCATTCGTGCATGCCTAATTGCTATTCAAGGATCGTGAGTGTGGGTGAGGAGAACCGAATAGTTCTCATTGCCAAGACTAATGTTTCTGCTGGTGAAGAACTAAAGTACGATTACTTGTTTGAGCCGGATGAATGTGACGAGCTGAGAGTTCCCTGTCTATGTAAAGCTCCCAACTGTAGGAAATTCTTGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009893 GO:0010604 GO:0010638 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033043 GO:0033044 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0060255 GO:0065007 GO:0080090 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD PHD_2 PWWP SAND SET zf-HC5HC2H_2

Protein Analysis

654

Amino Acids

73.93

Weight (kDa)

8.81

Isoelectric Point (pI)

40.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_2	PF13831	233 - 267	2.5e-12	PHD-finger
zf-HC5HC2H_2	PF13832	274 - 387	1.2e-25	PHD-zinc-finger like domain
zf-HC5HC2H	PF13771	296 - 388	1.3e-10	PHD-like zinc-binding domain
SET	PF00856	524 - 628	7.2e-26	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003180)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61740 AT3G61740
fragaria_vesca	FvH4_1g22790 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370 FvH4_7g16370
malus_domestica	MD01G1080200.v1.1
prunus_persica	Prupe.2G187600_v2.0.a1
pyrus_communis	pycom01g10850
rosa_chinensis	RchiOBHm_Chr1g0359381 RchiOBHm_Chr2g0117111
rosa_laevigata	RLG00000018331 RLG00000027874
rosa_multiflora	Rmu_sc0005833.1_g000005 Rmu_ssc0000358.1_g000003
rosa_roxburghii	Rroxscaffold_2G00126700 Rroxscaffold_4G00297040
rosa_rugosa	Rorug01G0270700 Rorug01G0270800 Rorug02G0210600.1
rosa_samantha	Rh1AG284200 Rh1BG250300 Rh1CG268200 Rh1DG279200 Rh2AG266300 Rh2BG278700 Rh2DG273500 Rh2DG292600
rosa_wichuraiana	Rw1G025230 Rw2G021020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	955
AccBSI	CCGCTC	2 cut(s)	1390, 1636
AciI	CCGC	5 cut(s)	50, 463, 1154, 1390, 1636
AclWI	GGATC	2 cut(s)	1512, 1808
AcoI	YGGCCR	2 cut(s)	47, 349
AcsI	RAATTY	4 cut(s)	249, 1372, 1486, 1952
AcuI	CTGAAG	5 cut(s)	48, 1007, 1188, 1237, 1308
AdeI	CACNNNGTG	1 cut(s)	879
AfaI	GTAC	7 cut(s)	324, 408, 626, 1006, 1335, 1676, 1877
AfiI	CCNNNNNNNGG	5 cut(s)	421, 842, 917, 953, 1947
AflIII	ACRYGT	3 cut(s)	760, 1031, 1739
AjnI	CCWGG	3 cut(s)	273, 765, 1104
AjuI	GAANNNNNNNTTGG	4 cut(s)	936, 968, 1414, 1446
Alw21I	GWGCWC	5 cut(s)	14, 282, 738, 1161, 1460
Alw26I	GTCTC	2 cut(s)	833, 895
Alw44I	GTGCAC	2 cut(s)	734, 1157
AlwI	GGATC	2 cut(s)	1512, 1808
AlwNI	CAGNNNCTG	2 cut(s)	125, 1181
Ama87I	CYCGRG	1 cut(s)	36
AoxI	GGCC	3 cut(s)	47, 349, 534
ApaLI	GTGCAC	2 cut(s)	734, 1157
ApeKI	GCWGC	3 cut(s)	595, 1217, 1343
ApoI	RAATTY	4 cut(s)	249, 1372, 1486, 1952
Asp700I	GAANNNNTTC	1 cut(s)	1247
AspS9I	GGNCC	2 cut(s)	271, 1418
AsuC2I	CCSGG	1 cut(s)	1541
AsuHPI	GGTGA	6 cut(s)	1397, 1505, 1529, 1643, 1826, 1874
AsuII	TTCGAA	1 cut(s)	1234
AvaI	CYCGRG	1 cut(s)	36
AvaII	GGWCC	2 cut(s)	271, 1418
BaeGI	GKGCMC	2 cut(s)	738, 1161
BaeI	ACNNNNGTAYC	2 cut(s)	390, 423
BanII	GRGCYC	2 cut(s)	14, 119
BarI	GAAGNNNNNNTAC	2 cut(s)	399, 431
BbsI	GAAGAC	2 cut(s)	54, 699
Bbv12I	GWGCWC	5 cut(s)	14, 282, 738, 1161, 1460
BbvI	GCAGC	3 cut(s)	607, 1204, 1330
BccI	CCATC	3 cut(s)	669, 934, 1566
BceAI	ACGGC	4 cut(s)	43, 403, 716, 1338
BciT130I	CCWGG	3 cut(s)	275, 767, 1106
BclI	TGATCA	1 cut(s)	705
BcnI	CCSGG	1 cut(s)	1541
BcoDI	GTCTC	2 cut(s)	833, 895
BfmI	CTRYAG	2 cut(s)	1084, 1945
BfuAI	ACCTGC	1 cut(s)	955
BglII	AGATCT	1 cut(s)	1657
BisI	GCNGC	5 cut(s)	50, 596, 1218, 1344, 1391
BlpI	GCTNAGC	1 cut(s)	237
BlsI	GCNGC	5 cut(s)	51, 597, 1219, 1345, 1392
Bme1390I	CCNGG	4 cut(s)	275, 767, 1106, 1541
Bme18I	GGWCC	2 cut(s)	271, 1418
BmeT110I	CYCGRG	1 cut(s)	36
BmgT120I	GGNCC	2 cut(s)	271, 1418
BmiI	GGNNCC	4 cut(s)	467, 945, 1021, 1419
BmrFI	CCNGG	4 cut(s)	275, 767, 1106, 1541
BmrI	ACTGGG	1 cut(s)	327
BmsI	GCATC	5 cut(s)	214, 450, 1079, 1340, 1723
BmuI	ACTGGG	1 cut(s)	327
BpiI	GAAGAC	2 cut(s)	54, 699
BplI	GAGNNNNNCTC	2 cut(s)	19, 51
BpmI	CTGGAG	1 cut(s)	296
Bpu10I	CCTNAGC	1 cut(s)	118
Bpu1102I	GCTNAGC	1 cut(s)	237
Bpu14I	TTCGAA	1 cut(s)	1234
BpuEI	CTTGAG	1 cut(s)	1474
BpuMI	CCSGG	1 cut(s)	1541
BsaAI	YACGTR	1 cut(s)	1589
BsaJI	CCNNGG	2 cut(s)	469, 1412
BsaXI	ACNNNNNCTCC	2 cut(s)	1599, 1629
Bsc4I	CCNNNNNNNGG	5 cut(s)	421, 842, 917, 953, 1947
Bse118I	RCCGGY	2 cut(s)	45, 365
Bse1I	ACTGG	4 cut(s)	333, 555, 632, 1331
Bse3DI	GCAATG	2 cut(s)	1650, 1836
BseBI	CCWGG	3 cut(s)	275, 767, 1106
BseDI	CCNNGG	2 cut(s)	469, 1412
BseGI	GGATG	3 cut(s)	907, 1577, 1903
BseLI	CCNNNNNNNGG	5 cut(s)	421, 842, 917, 953, 1947
BseMI	GCAATG	2 cut(s)	1650, 1836
BseMII	CTCAG	5 cut(s)	132, 228, 1323, 1652, 1904
BseNI	ACTGG	4 cut(s)	333, 555, 632, 1331
BseRI	GAGGAG	1 cut(s)	1832
BseSI	GKGCMC	2 cut(s)	738, 1161
BseX3I	CGGCCG	1 cut(s)	47
BseXI	GCAGC	3 cut(s)	607, 1204, 1330
BsgI	GTGCAG	3 cut(s)	240, 684, 1009
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	3 cut(s)	49, 351, 536
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	5 cut(s)	14, 282, 738, 1161, 1460
BsiHKCI	CYCGRG	1 cut(s)	36
BsiSI	CCGG	4 cut(s)	46, 366, 1540, 1895
BslFI	GGGAC	2 cut(s)	315, 1431
BslI	CCNNNNNNNGG	5 cut(s)	421, 842, 917, 953, 1947
BsmAI	GTCTC	2 cut(s)	833, 895
BsmFI	GGGAC	2 cut(s)	315, 1431
BsmI	GAATGC	1 cut(s)	749
BsnI	GGCC	3 cut(s)	49, 351, 536
BsoBI	CYCGRG	1 cut(s)	36
Bsp119I	TTCGAA	1 cut(s)	1234
Bsp1286I	GDGCHC	6 cut(s)	14, 119, 282, 738, 1161, 1460
Bsp143I	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
Bsp1720I	GCTNAGC	1 cut(s)	237
BspACI	CCGC	5 cut(s)	50, 463, 1154, 1390, 1636
BspANI	GGCC	3 cut(s)	49, 351, 536
BspCNI	CTCAG	5 cut(s)	131, 229, 1322, 1653, 1905
BspHI	TCATGA	1 cut(s)	931
BspLI	GGNNCC	4 cut(s)	467, 945, 1021, 1419
BspMI	ACCTGC	1 cut(s)	955
BspPI	GGATC	2 cut(s)	1512, 1808
BspT104I	TTCGAA	1 cut(s)	1234
BsrBI	CCGCTC	2 cut(s)	1390, 1636
BsrDI	GCAATG	2 cut(s)	1650, 1836
BsrFI	RCCGGY	2 cut(s)	45, 365
BsrI	ACTGG	4 cut(s)	333, 555, 632, 1331
BssAI	RCCGGY	2 cut(s)	45, 365
BssECI	CCNNGG	2 cut(s)	469, 1412
BssMI	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
BssT1I	CCWWGG	2 cut(s)	469, 1412
Bst2UI	CCWGG	3 cut(s)	275, 767, 1106
Bst4CI	ACNGT	5 cut(s)	327, 376, 1674, 1761, 1946
BstAPI	GCANNNNNTGC	2 cut(s)	1067, 1695
BstBAI	YACGTR	1 cut(s)	1589
BstBI	TTCGAA	1 cut(s)	1234
BstC8I	GCNNGC	6 cut(s)	47, 90, 234, 1081, 1229, 1781
BstDEI	CTNAG	6 cut(s)	118, 237, 962, 1309, 1661, 1913
BstENI	CCTNNNNNAGG	1 cut(s)	840
BstF5I	GGATG	3 cut(s)	907, 1577, 1903
BstKTI	GATC	6 cut(s)	708, 1370, 1507, 1660, 1713, 1803
BstMAI	GTCTC	2 cut(s)	833, 895
BstMBI	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	5 cut(s)	55, 238, 1067, 1076, 1695
BstNI	CCWGG	3 cut(s)	275, 767, 1106
BstNSI	RCATGY	6 cut(s)	236, 764, 798, 1035, 1743, 1783
BstSCI	CCNGG	4 cut(s)	273, 765, 1104, 1539
BstSFI	CTRYAG	2 cut(s)	1084, 1945
BstSLI	GKGCMC	2 cut(s)	738, 1161
BstV1I	GCAGC	3 cut(s)	607, 1204, 1330
BstV2I	GAAGAC	2 cut(s)	54, 699
BstX2I	RGATCY	1 cut(s)	1657
BstXI	CCANNNNNNTGG	1 cut(s)	340
BstYI	RGATCY	1 cut(s)	1657
BstZI	CGGCCG	1 cut(s)	47
BsuRI	GGCC	3 cut(s)	49, 351, 536
BtsCI	GGATG	3 cut(s)	907, 1577, 1903
BtsI	GCAGTG	1 cut(s)	1099
BtsIMutI	CAGTG	4 cut(s)	332, 548, 861, 1099
BveI	ACCTGC	1 cut(s)	955
Cac8I	GCNNGC	6 cut(s)	47, 90, 234, 1081, 1229, 1781
CaiI	CAGNNNCTG	2 cut(s)	125, 1181
CciI	TCATGA	1 cut(s)	931
Cfr10I	RCCGGY	2 cut(s)	45, 365
Cfr13I	GGNCC	2 cut(s)	271, 1418
CseI	GACGC	1 cut(s)	647
Csp6I	GTAC	7 cut(s)	323, 407, 625, 1005, 1334, 1675, 1876
CspCI	CAANNNNNGTGG	2 cut(s)	850, 885
CviQI	GTAC	7 cut(s)	323, 407, 625, 1005, 1334, 1675, 1876
DdeI	CTNAG	6 cut(s)	118, 237, 962, 1309, 1661, 1913
DpnI	GATC	6 cut(s)	707, 1369, 1506, 1659, 1712, 1802
DpnII	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
DraI	TTTAAA	1 cut(s)	1465
DraIII	CACNNNGTG	1 cut(s)	879
EaeI	YGGCCR	2 cut(s)	47, 349
EagI	CGGCCG	1 cut(s)	47
Ecl136II	GAGCTC	1 cut(s)	12
EclXI	CGGCCG	1 cut(s)	47
Eco130I	CCWWGG	2 cut(s)	469, 1412
Eco24I	GRGCYC	2 cut(s)	14, 119
Eco32I	GATATC	1 cut(s)	811
Eco47I	GGWCC	2 cut(s)	271, 1418
Eco52I	CGGCCG	1 cut(s)	47
Eco53kI	GAGCTC	1 cut(s)	12
Eco57I	CTGAAG	5 cut(s)	48, 1007, 1188, 1237, 1308
Eco88I	CYCGRG	1 cut(s)	36
EcoICRI	GAGCTC	1 cut(s)	12
EcoNI	CCTNNNNNAGG	1 cut(s)	840
EcoO109I	RGGNCCY	1 cut(s)	271
EcoRII	CCWGG	3 cut(s)	273, 765, 1104
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	2 cut(s)	469, 1412
EcoT38I	GRGCYC	2 cut(s)	14, 119
ErhI	CCWWGG	2 cut(s)	469, 1412
FaqI	GGGAC	2 cut(s)	315, 1431
FauI	CCCGC	1 cut(s)	1629
FauNDI	CATATG	4 cut(s)	188, 403, 420, 710
FbaI	TGATCA	1 cut(s)	705
Fnu4HI	GCNGC	5 cut(s)	50, 596, 1218, 1344, 1391
FokI	GGATG	3 cut(s)	894, 1584, 1910
FriOI	GRGCYC	2 cut(s)	14, 119
Fsp4HI	GCNGC	5 cut(s)	50, 596, 1218, 1344, 1391
GluI	GCNGC	5 cut(s)	50, 596, 1218, 1344, 1391
GsuI	CTGGAG	1 cut(s)	296
HaeIII	GGCC	3 cut(s)	49, 351, 536
HapII	CCGG	4 cut(s)	46, 366, 1540, 1895
HgaI	GACGC	1 cut(s)	647
HincII	GTYRAC	2 cut(s)	637, 871
HindII	GTYRAC	2 cut(s)	637, 871
HindIII	AAGCTT	1 cut(s)	1225
HpaII	CCGG	4 cut(s)	46, 366, 1540, 1895
HphI	GGTGA	6 cut(s)	1397, 1505, 1529, 1643, 1826, 1874
Hpy166II	GTNNAC	5 cut(s)	637, 648, 736, 871, 1159
Hpy188I	TCNGA	8 cut(s)	9, 16, 127, 316, 987, 1297, 1312, 1662
Hpy188III	TCNNGA	9 cut(s)	911, 925, 932, 1074, 1175, 1560, 1601, 1708, 1804
Hpy8I	GTNNAC	5 cut(s)	637, 648, 736, 871, 1159
HpyAV	CCTTC	7 cut(s)	106, 389, 425, 526, 1212, 1311, 1598
HpyCH4III	ACNGT	5 cut(s)	327, 376, 1674, 1761, 1946
HpyCH4IV	ACGT	2 cut(s)	1588, 1645
HpyF10VI	GCNNNNNNNGC	5 cut(s)	55, 238, 1067, 1076, 1695
HpyF3I	CTNAG	6 cut(s)	118, 237, 962, 1309, 1661, 1913
HpySE526I	ACGT	2 cut(s)	1588, 1645
KroI	GCCGGC	1 cut(s)	45
KroNI	GCCGGC	1 cut(s)	47
Ksp22I	TGATCA	1 cut(s)	705
Kzo9I	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
LmnI	GCTCC	4 cut(s)	277, 440, 465, 1942
Lsp1109I	GCAGC	3 cut(s)	607, 1204, 1330
LweI	GCATC	5 cut(s)	214, 450, 1079, 1340, 1723
MaeII	ACGT	2 cut(s)	1588, 1645
MaeIII	GTNAC	7 cut(s)	242, 361, 370, 383, 1095, 1129, 1904
MalI	GATC	6 cut(s)	707, 1369, 1506, 1659, 1712, 1802
MbiI	CCGCTC	2 cut(s)	1390, 1636
MboI	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
MfeI	CAATTG	1 cut(s)	345
MflI	RGATCY	1 cut(s)	1657
MhlI	GDGCHC	6 cut(s)	14, 119, 282, 738, 1161, 1460
MlyI	GAGTC	4 cut(s)	461, 1006, 1159, 1322
MmeI	TCCRAC	1 cut(s)	934
MroNI	GCCGGC	1 cut(s)	45
MroXI	GAANNNNTTC	1 cut(s)	1247
MseI	TTAA	5 cut(s)	1362, 1377, 1464, 1763, 1767
MslI	CAYNNNNRTG	2 cut(s)	213, 1056
MspI	CCGG	4 cut(s)	46, 366, 1540, 1895
MspR9I	CCNGG	4 cut(s)	275, 767, 1106, 1541
MunI	CAATTG	1 cut(s)	345
Mva1269I	GAATGC	1 cut(s)	749
MvaI	CCWGG	3 cut(s)	275, 767, 1106
MwoI	GCNNNNNNNGC	5 cut(s)	55, 238, 1067, 1076, 1695
NaeI	GCCGGC	1 cut(s)	47
NciI	CCSGG	1 cut(s)	1541
NdeI	CATATG	4 cut(s)	188, 403, 420, 710
NdeII	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
NgoMIV	GCCGGC	1 cut(s)	45
NlaIV	GGNNCC	4 cut(s)	467, 945, 1021, 1419
NmeAIII	GCCGAG	1 cut(s)	377
NmuCI	GTSAC	3 cut(s)	242, 361, 1904
NspI	RCATGY	6 cut(s)	236, 764, 798, 1035, 1743, 1783
NspV	TTCGAA	1 cut(s)	1234
PacI	TTAATTAA	1 cut(s)	1767
PaeI	GCATGC	2 cut(s)	236, 1783
PaeR7I	CTCGAG	1 cut(s)	36
PagI	TCATGA	1 cut(s)	931
PciI	ACATGT	3 cut(s)	760, 1031, 1739
PctI	GAATGC	1 cut(s)	749
PdiI	GCCGGC	1 cut(s)	47
PdmI	GAANNNNTTC	1 cut(s)	1247
PfeI	GAWTC	7 cut(s)	4, 356, 608, 928, 957, 966, 1478
PfoI	TCCNGGA	1 cut(s)	765
PkrI	GCNGC	5 cut(s)	51, 597, 1219, 1345, 1392
PleI	GAGTC	4 cut(s)	460, 1006, 1159, 1321
PpsI	GAGTC	4 cut(s)	460, 1006, 1159, 1321
Ppu21I	YACGTR	1 cut(s)	1589
PpuMI	RGGWCCY	1 cut(s)	271
PscI	ACATGT	3 cut(s)	760, 1031, 1739
Psp124BI	GAGCTC	1 cut(s)	14
Psp5II	RGGWCCY	1 cut(s)	271
Psp6I	CCWGG	3 cut(s)	273, 765, 1104
PspGI	CCWGG	3 cut(s)	273, 765, 1104
PspN4I	GGNNCC	4 cut(s)	467, 945, 1021, 1419
PspPI	GGNCC	2 cut(s)	271, 1418
PspPPI	RGGWCCY	1 cut(s)	271
PspXI	VCTCGAGB	1 cut(s)	36
PstNI	CAGNNNCTG	2 cut(s)	125, 1181
PsuI	RGATCY	1 cut(s)	1657
RsaI	GTAC	7 cut(s)	324, 408, 626, 1006, 1335, 1676, 1877
RsaNI	GTAC	7 cut(s)	323, 407, 625, 1005, 1334, 1675, 1876
RseI	CAYNNNNRTG	2 cut(s)	213, 1056
SacI	GAGCTC	1 cut(s)	14
SaqAI	TTAA	5 cut(s)	1362, 1377, 1464, 1763, 1767
SatI	GCNGC	5 cut(s)	50, 596, 1218, 1344, 1391
Sau3AI	GATC	6 cut(s)	705, 1367, 1504, 1657, 1710, 1800
Sau96I	GGNCC	2 cut(s)	271, 1418
SchI	GAGTC	4 cut(s)	461, 1006, 1159, 1322
ScrFI	CCNGG	4 cut(s)	275, 767, 1106, 1541
SduI	GDGCHC	6 cut(s)	14, 119, 282, 738, 1161, 1460
SfaNI	GCATC	5 cut(s)	214, 450, 1079, 1340, 1723
SfcI	CTRYAG	2 cut(s)	1084, 1945
Sfr274I	CTCGAG	1 cut(s)	36
SfuI	TTCGAA	1 cut(s)	1234
SinI	GGWCC	2 cut(s)	271, 1418
SlaI	CTCGAG	1 cut(s)	36
SmiMI	CAYNNNNRTG	2 cut(s)	213, 1056
SmlI	CTYRAG	2 cut(s)	36, 1453
SmoI	CTYRAG	2 cut(s)	36, 1453
SphI	GCATGC	2 cut(s)	236, 1783
SsiI	CCGC	5 cut(s)	50, 463, 1154, 1390, 1636
SspI	AATATT	2 cut(s)	149, 1597
SstI	GAGCTC	1 cut(s)	14
StyD4I	CCNGG	4 cut(s)	273, 765, 1104, 1539
StyI	CCWWGG	2 cut(s)	469, 1412
TaaI	ACNGT	5 cut(s)	327, 376, 1674, 1761, 1946
TaiI	ACGT	2 cut(s)	1591, 1648
TaqI	TCGA	4 cut(s)	37, 1234, 1262, 1408
TauI	GCSGC	2 cut(s)	52, 1393
TfiI	GAWTC	7 cut(s)	4, 356, 608, 928, 957, 966, 1478
Tru1I	TTAA	5 cut(s)	1362, 1377, 1464, 1763, 1767
Tru9I	TTAA	5 cut(s)	1362, 1377, 1464, 1763, 1767
TscAI	CASTG	4 cut(s)	332, 555, 868, 1106
TseFI	GTSAC	3 cut(s)	242, 361, 1904
TseI	GCWGC	3 cut(s)	595, 1217, 1343
Tsp45I	GTSAC	3 cut(s)	242, 361, 1904
TspRI	CASTG	4 cut(s)	332, 555, 868, 1106
VneI	GTGCAC	2 cut(s)	734, 1157
VpaK11BI	GGWCC	2 cut(s)	271, 1418
XagI	CCTNNNNNAGG	1 cut(s)	840
XapI	RAATTY	4 cut(s)	249, 1372, 1486, 1952
XceI	RCATGY	6 cut(s)	236, 764, 798, 1035, 1743, 1783
XcmI	CCANNNNNNNNNTGG	1 cut(s)	746
XhoI	CTCGAG	1 cut(s)	36
XmnI	GAANNNNTTC	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.