Belongs to the helicase family. Dicer subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01040 AT1G01040 |
| fragaria_vesca | FvH4_7g17920 FvH4_7g17920 FvH4_7g17920 FvH4_7g17920 |
| malus_domestica | MD01G1091600.v1.1 MD07G1161800.v1.1 |
| prunus_persica | Prupe.2G200900_v2.0.a1 |
| pyrus_communis | pycom01g11560 pycom07g15740 |
| rosa_chinensis | RchiOBHm_Chr1g0361361 |
| rosa_laevigata | RLG00000027722 |
| rosa_multiflora | Rmu_sc0002119.1_g000026 |
| rosa_roxburghii | Rroxscaffold_4G00295020 |
| rosa_rugosa | Rorug01G0288900 |
| rosa_samantha | Rh1AG299700 Rh1BG263500 Rh1CG281100 Rh1DG293500 |
| rosa_wichuraiana | Rw1G026540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1289, 4008 |
| Acc16I | TGCGCA | 1 cut(s) | 1471 |
| Acc36I | ACCTGC | 2 cut(s) | 5076, 5106 |
| Acc65I | GGTACC | 1 cut(s) | 3739 |
| AccB1I | GGYRCC | 2 cut(s) | 3739, 5318 |
| AccB7I | CCANNNNNTGG | 6 cut(s) | 149, 1602, 2953, 3044, 3435, 3686 |
| AccBSI | CCGCTC | 1 cut(s) | 255 |
| AccI | GTMKAC | 2 cut(s) | 3180, 4571 |
| AccII | CGCG | 1 cut(s) | 4035 |
| AciI | CCGC | 9 cut(s) | 255, 1007, 3612, 4035, 4770, 5315, 5337, 5549, 5754 |
| AcoI | YGGCCR | 1 cut(s) | 165 |
| AcsI | RAATTY | 9 cut(s) | 286, 421, 918, 1257, 2354, 2713, 4925, 5125, 5491 |
| AcuI | CTGAAG | 5 cut(s) | 570, 2648, 3096, 5478, 5640 |
| AcvI | CACGTG | 1 cut(s) | 5135 |
| AdeI | CACNNNGTG | 2 cut(s) | 1339, 1814 |
| AflII | CTTAAG | 1 cut(s) | 2557 |
| AflIII | ACRYGT | 3 cut(s) | 3159, 5134, 5791 |
| AgeI | ACCGGT | 2 cut(s) | 410, 5736 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4037 |
| AhlI | ACTAGT | 1 cut(s) | 2390 |
| AjiI | CACGTC | 1 cut(s) | 5342 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3924, 3956, 4731, 4763 |
| AleI | CACNNNNGTG | 1 cut(s) | 4095 |
| Alw21I | GWGCWC | 2 cut(s) | 3571, 4847 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1240, 2155, 5572 |
| Ama87I | CYCGRG | 1 cut(s) | 2783 |
| ApoI | RAATTY | 9 cut(s) | 286, 421, 918, 1257, 2354, 2713, 4925, 5125, 5491 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2135, 2167, 2400, 2432, 3202, 3234 |
| AsiGI | ACCGGT | 2 cut(s) | 410, 5736 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 918, 1134, 2193 |
| Asp718I | GGTACC | 1 cut(s) | 3739 |
| AspLEI | GCGC | 2 cut(s) | 1472, 1728 |
| AsuC2I | CCSGG | 3 cut(s) | 270, 2360, 4173 |
| AsuII | TTCGAA | 1 cut(s) | 290 |
| AvaI | CYCGRG | 1 cut(s) | 2783 |
| AvaII | GGWCC | 4 cut(s) | 152, 1605, 2819, 2882 |
| AxyI | CCTNAGG | 2 cut(s) | 924, 2244 |
| BaeGI | GKGCMC | 2 cut(s) | 2304, 5188 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 5337, 5370 |
| BalI | TGGCCA | 1 cut(s) | 167 |
| BamHI | GGATCC | 1 cut(s) | 3439 |
| BanI | GGYRCC | 2 cut(s) | 3739, 5318 |
| BanII | GRGCYC | 4 cut(s) | 399, 2730, 3571, 4195 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2043, 2075 |
| BauI | CACGAG | 3 cut(s) | 639, 4604, 5911 |
| BbrPI | CACGTG | 1 cut(s) | 5135 |
| BbsI | GAAGAC | 2 cut(s) | 374, 3316 |
| Bbv12I | GWGCWC | 2 cut(s) | 3571, 4847 |
| BbvCI | CCTCAGC | 1 cut(s) | 2400 |
| BceAI | ACGGC | 4 cut(s) | 187, 1997, 2903, 5009 |
| BciVI | GTATCC | 3 cut(s) | 2335, 2626, 2650 |
| BclI | TGATCA | 3 cut(s) | 229, 829, 4600 |
| BcnI | CCSGG | 3 cut(s) | 270, 2360, 4173 |
| BcuI | ACTAGT | 1 cut(s) | 2390 |
| BfmI | CTRYAG | 6 cut(s) | 181, 2118, 3095, 3906, 4617, 5349 |
| BfrI | CTTAAG | 1 cut(s) | 2557 |
| BfuAI | ACCTGC | 2 cut(s) | 5076, 5106 |
| BfuI | GTATCC | 3 cut(s) | 2335, 2626, 2650 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 270 |
| BglII | AGATCT | 1 cut(s) | 4287 |
| BmcAI | AGTACT | 1 cut(s) | 2166 |
| Bme18I | GGWCC | 4 cut(s) | 152, 1605, 2819, 2882 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4037 |
| BmeT110I | CYCGRG | 1 cut(s) | 2783 |
| BmgBI | CACGTC | 1 cut(s) | 5342 |
| BmiI | GGNNCC | 9 cut(s) | 1607, 2821, 2883, 2884, 3441, 3741, 4192, 4940, 5320 |
| BmrI | ACTGGG | 5 cut(s) | 42, 48, 1829, 2751, 5841 |
| BmuI | ACTGGG | 5 cut(s) | 42, 48, 1829, 2751, 5841 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2619 |
| BpiI | GAAGAC | 2 cut(s) | 374, 3316 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 249, 281, 3944, 3976, 4673, 4705 |
| BpmI | CTGGAG | 5 cut(s) | 126, 3971, 5004, 5064, 5382 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1713, 2400, 4146 |
| Bpu14I | TTCGAA | 1 cut(s) | 290 |
| BpuEI | CTTGAG | 5 cut(s) | 2156, 2897, 3198, 4675, 4700 |
| BpuMI | CCSGG | 3 cut(s) | 270, 2360, 4173 |
| Bsa29I | ATCGAT | 1 cut(s) | 3269 |
| BsaAI | YACGTR | 2 cut(s) | 5135, 5792 |
| BsaBI | GATNNNNATC | 2 cut(s) | 690, 3513 |
| BsaI | GGTCTC | 1 cut(s) | 1396 |
| BsaWI | WCCGGW | 3 cut(s) | 157, 410, 5736 |
| Bse118I | RCCGGY | 3 cut(s) | 410, 1405, 5736 |
| Bse21I | CCTNAGG | 2 cut(s) | 924, 2244 |
| Bse3DI | GCAATG | 7 cut(s) | 181, 325, 499, 883, 1020, 1057, 2434 |
| Bse8I | GATNNNNATC | 2 cut(s) | 690, 3513 |
| BseCI | ATCGAT | 1 cut(s) | 3269 |
| BseJI | GATNNNNATC | 2 cut(s) | 690, 3513 |
| BseMI | GCAATG | 7 cut(s) | 181, 325, 499, 883, 1020, 1057, 2434 |
| BseSI | GKGCMC | 2 cut(s) | 2304, 5188 |
| BseYI | CCCAGC | 1 cut(s) | 1706 |
| BsgI | GTGCAG | 5 cut(s) | 1598, 2168, 2911, 3558, 5745 |
| Bsh1236I | CGCG | 1 cut(s) | 4035 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4976 |
| BshNI | GGYRCC | 2 cut(s) | 3739, 5318 |
| BshTI | ACCGGT | 2 cut(s) | 410, 5736 |
| BshVI | ATCGAT | 1 cut(s) | 3269 |
| BsiEI | CGRYCG | 1 cut(s) | 4976 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3571, 4847 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2783 |
| BsiSI | CCGG | 7 cut(s) | 158, 270, 411, 1406, 2359, 4173, 5737 |
| BsmI | GAATGC | 7 cut(s) | 298, 600, 878, 2552, 2569, 5590, 5831 |
| Bso31I | GGTCTC | 1 cut(s) | 1396 |
| BsoBI | CYCGRG | 1 cut(s) | 2783 |
| Bsp119I | TTCGAA | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 7 cut(s) | 399, 2304, 2730, 3571, 4195, 4847, 5188 |
| BspACI | CCGC | 9 cut(s) | 255, 1007, 3612, 4035, 4770, 5315, 5337, 5549, 5754 |
| BspDI | ATCGAT | 1 cut(s) | 3269 |
| BspFNI | CGCG | 1 cut(s) | 4035 |
| BspHI | TCATGA | 3 cut(s) | 1612, 4794, 5203 |
| BspLI | GGNNCC | 9 cut(s) | 1607, 2821, 2883, 2884, 3441, 3741, 4192, 4940, 5320 |
| BspMAI | CTGCAG | 3 cut(s) | 185, 3910, 5353 |
| BspMI | ACCTGC | 2 cut(s) | 5076, 5106 |
| BspQI | GCTCTTC | 2 cut(s) | 1713, 3196 |
| BspT104I | TTCGAA | 1 cut(s) | 290 |
| BspT107I | GGYRCC | 2 cut(s) | 3739, 5318 |
| BspTI | CTTAAG | 1 cut(s) | 2557 |
| BspTNI | GGTCTC | 1 cut(s) | 1396 |
| BsrBI | CCGCTC | 1 cut(s) | 255 |
| BsrDI | GCAATG | 7 cut(s) | 181, 325, 499, 883, 1020, 1057, 2434 |
| BsrFI | RCCGGY | 3 cut(s) | 410, 1405, 5736 |
| BssAI | RCCGGY | 3 cut(s) | 410, 1405, 5736 |
| BssNAI | GTATAC | 1 cut(s) | 4572 |
| BssSI | CACGAG | 3 cut(s) | 639, 4604, 5911 |
| BssT1I | CCWWGG | 5 cut(s) | 3434, 3586, 3923, 3940, 5862 |
| Bst1107I | GTATAC | 1 cut(s) | 4572 |
| Bst2BI | CACGAG | 3 cut(s) | 639, 4604, 5911 |
| Bst4CI | ACNGT | 9 cut(s) | 245, 373, 1532, 2461, 2674, 3711, 4864, 4977, 5503 |
| BstAFI | CTTAAG | 1 cut(s) | 2557 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 180, 5138, 5422, 5594 |
| BstBAI | YACGTR | 2 cut(s) | 5135, 5792 |
| BstBI | TTCGAA | 1 cut(s) | 290 |
| BstDSI | CCRYGG | 1 cut(s) | 4186 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2243, 2268 |
| BstFNI | CGCG | 1 cut(s) | 4035 |
| BstHHI | GCGC | 2 cut(s) | 1472, 1728 |
| BstMCI | CGRYCG | 1 cut(s) | 4976 |
| BstNSI | RCATGY | 6 cut(s) | 1553, 2096, 2974, 3163, 4234, 5768 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2619 |
| BstSFI | CTRYAG | 6 cut(s) | 181, 2118, 3095, 3906, 4617, 5349 |
| BstSLI | GKGCMC | 2 cut(s) | 2304, 5188 |
| BstUI | CGCG | 1 cut(s) | 4035 |
| BstV2I | GAAGAC | 2 cut(s) | 374, 3316 |
| BstX2I | RGATCY | 8 cut(s) | 3034, 3108, 3199, 3280, 3439, 3490, 3514, 4287 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1172, 1736, 4533 |
| BstYI | RGATCY | 8 cut(s) | 3034, 3108, 3199, 3280, 3439, 3490, 3514, 4287 |
| BstZ17I | GTATAC | 1 cut(s) | 4572 |
| Bsu15I | ATCGAT | 1 cut(s) | 3269 |
| Bsu36I | CCTNAGG | 2 cut(s) | 924, 2244 |
| BsuI | GTATCC | 3 cut(s) | 2335, 2626, 2650 |
| BsuTUI | ATCGAT | 1 cut(s) | 3269 |
| BtgI | CCRYGG | 1 cut(s) | 4186 |
| BtgZI | GCGATG | 2 cut(s) | 2037, 5034 |
| BtrI | CACGTC | 1 cut(s) | 5342 |
| BtsI | GCAGTG | 4 cut(s) | 2429, 3139, 3826, 4166 |
| BveI | ACCTGC | 2 cut(s) | 5076, 5106 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1240, 2155, 5572 |
| CciI | TCATGA | 3 cut(s) | 1612, 4794, 5203 |
| CfoI | GCGC | 2 cut(s) | 1472, 1728 |
| Cfr10I | RCCGGY | 3 cut(s) | 410, 1405, 5736 |
| ClaI | ATCGAT | 1 cut(s) | 3269 |
| CseI | GACGC | 4 cut(s) | 146, 1024, 4041, 4956 |
| CsiI | ACCWGGT | 2 cut(s) | 2665, 2679 |
| CspAI | ACCGGT | 2 cut(s) | 410, 5736 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2377, 2412, 2974, 3009 |
| DraI | TTTAAA | 2 cut(s) | 4930, 5898 |
| DraIII | CACNNNGTG | 2 cut(s) | 1339, 1814 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4037 |
| EaeI | YGGCCR | 1 cut(s) | 165 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4037 |
| EciI | GGCGGA | 1 cut(s) | 3627 |
| Ecl136II | GAGCTC | 1 cut(s) | 3569 |
| Eco130I | CCWWGG | 5 cut(s) | 3434, 3586, 3923, 3940, 5862 |
| Eco147I | AGGCCT | 1 cut(s) | 637 |
| Eco24I | GRGCYC | 4 cut(s) | 399, 2730, 3571, 4195 |
| Eco31I | GGTCTC | 1 cut(s) | 1396 |
| Eco47I | GGWCC | 4 cut(s) | 152, 1605, 2819, 2882 |
| Eco53kI | GAGCTC | 1 cut(s) | 3569 |
| Eco57I | CTGAAG | 5 cut(s) | 570, 2648, 3096, 5478, 5640 |
| Eco72I | CACGTG | 1 cut(s) | 5135 |
| Eco81I | CCTNAGG | 2 cut(s) | 924, 2244 |
| Eco88I | CYCGRG | 1 cut(s) | 2783 |
| EcoICRI | GAGCTC | 1 cut(s) | 3569 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2243, 2268 |
| EcoO109I | RGGNCCY | 4 cut(s) | 815, 2819, 2882, 4939 |
| EcoRI | GAATTC | 1 cut(s) | 286 |
| EcoT14I | CCWWGG | 5 cut(s) | 3434, 3586, 3923, 3940, 5862 |
| EcoT22I | ATGCAT | 3 cut(s) | 4480, 4648, 5418 |
| EcoT38I | GRGCYC | 4 cut(s) | 399, 2730, 3571, 4195 |
| ErhI | CCWWGG | 5 cut(s) | 3434, 3586, 3923, 3940, 5862 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1095, 1127, 3924, 3956, 4098, 4130 |
| FauI | CCCGC | 3 cut(s) | 1000, 4763, 5308 |
| FauNDI | CATATG | 2 cut(s) | 3774, 4648 |
| FbaI | TGATCA | 3 cut(s) | 229, 829, 4600 |
| FblI | GTMKAC | 2 cut(s) | 3180, 4571 |
| FriOI | GRGCYC | 4 cut(s) | 399, 2730, 3571, 4195 |
| FspI | TGCGCA | 1 cut(s) | 1471 |
| GlaI | GCGC | 2 cut(s) | 1471, 1727 |
| GsaI | CCCAGC | 1 cut(s) | 1710 |
| GsuI | CTGGAG | 5 cut(s) | 126, 3971, 5004, 5064, 5382 |
| HapII | CCGG | 7 cut(s) | 158, 270, 411, 1406, 2359, 4173, 5737 |
| HgaI | GACGC | 4 cut(s) | 146, 1024, 4041, 4956 |
| HhaI | GCGC | 2 cut(s) | 1472, 1728 |
| Hin6I | GCGC | 2 cut(s) | 1470, 1726 |
| HinP1I | GCGC | 2 cut(s) | 1470, 1726 |
| HincII | GTYRAC | 5 cut(s) | 1438, 2691, 3016, 4891, 5091 |
| HindII | GTYRAC | 5 cut(s) | 1438, 2691, 3016, 4891, 5091 |
| HindIII | AAGCTT | 2 cut(s) | 2707, 3726 |
| HpaII | CCGG | 7 cut(s) | 158, 270, 411, 1406, 2359, 4173, 5737 |
| Hpy99I | CGWCG | 1 cut(s) | 140 |
| HpyCH4III | ACNGT | 9 cut(s) | 245, 373, 1532, 2461, 2674, 3711, 4864, 4977, 5503 |
| HpyCH4IV | ACGT | 5 cut(s) | 3183, 4124, 5134, 5341, 5791 |
| HpySE526I | ACGT | 5 cut(s) | 3183, 4124, 5134, 5341, 5791 |
| HspAI | GCGC | 2 cut(s) | 1470, 1726 |
| KflI | GGGWCCC | 1 cut(s) | 2882 |
| KpnI | GGTACC | 1 cut(s) | 3743 |
| Ksp22I | TGATCA | 3 cut(s) | 229, 829, 4600 |
| LguI | GCTCTTC | 2 cut(s) | 1713, 3196 |
| MabI | ACCWGGT | 2 cut(s) | 2665, 2679 |
| MaeII | ACGT | 5 cut(s) | 3183, 4124, 5134, 5341, 5791 |
| MaeIII | GTNAC | 9 cut(s) | 1151, 2134, 2151, 2371, 2759, 3134, 3847, 4454, 5392 |
| MbiI | CCGCTC | 1 cut(s) | 255 |
| MfeI | CAATTG | 1 cut(s) | 947 |
| MflI | RGATCY | 8 cut(s) | 3034, 3108, 3199, 3280, 3439, 3490, 3514, 4287 |
| MhlI | GDGCHC | 7 cut(s) | 399, 2304, 2730, 3571, 4195, 4847, 5188 |
| MlsI | TGGCCA | 1 cut(s) | 167 |
| MluNI | TGGCCA | 1 cut(s) | 167 |
| MlyI | GAGTC | 9 cut(s) | 2131, 2629, 2696, 3131, 3205, 4105, 4682, 4713, 5861 |
| MmeI | TCCRAC | 2 cut(s) | 1580, 3704 |
| Mox20I | TGGCCA | 1 cut(s) | 167 |
| Mph1103I | ATGCAT | 3 cut(s) | 4480, 4648, 5418 |
| MroXI | GAANNNNTTC | 3 cut(s) | 918, 1134, 2193 |
| MscI | TGGCCA | 1 cut(s) | 167 |
| MslI | CAYNNNNRTG | 9 cut(s) | 474, 1170, 2097, 2210, 2519, 4095, 4531, 4608, 5528 |
| Msp20I | TGGCCA | 1 cut(s) | 167 |
| MspA1I | CMGCKG | 4 cut(s) | 3854, 4307, 5337, 5618 |
| MspCI | CTTAAG | 1 cut(s) | 2557 |
| MspI | CCGG | 7 cut(s) | 158, 270, 411, 1406, 2359, 4173, 5737 |
| MunI | CAATTG | 1 cut(s) | 947 |
| Mva1269I | GAATGC | 7 cut(s) | 298, 600, 878, 2552, 2569, 5590, 5831 |
| MvnI | CGCG | 1 cut(s) | 4035 |
| NciI | CCSGG | 3 cut(s) | 270, 2360, 4173 |
| NdeI | CATATG | 2 cut(s) | 3774, 4648 |
| NlaIV | GGNNCC | 9 cut(s) | 1607, 2821, 2883, 2884, 3441, 3741, 4192, 4940, 5320 |
| NmeAIII | GCCGAG | 1 cut(s) | 5849 |
| NmuCI | GTSAC | 6 cut(s) | 2134, 2151, 2371, 2759, 3134, 3847 |
| NsbI | TGCGCA | 1 cut(s) | 1471 |
| NsiI | ATGCAT | 3 cut(s) | 4480, 4648, 5418 |
| NspI | RCATGY | 6 cut(s) | 1553, 2096, 2974, 3163, 4234, 5768 |
| NspV | TTCGAA | 1 cut(s) | 290 |
| OliI | CACNNNNGTG | 1 cut(s) | 4095 |
| PaeI | GCATGC | 1 cut(s) | 4234 |
| PagI | TCATGA | 3 cut(s) | 1612, 4794, 5203 |
| PceI | AGGCCT | 1 cut(s) | 637 |
| PciI | ACATGT | 1 cut(s) | 3159 |
| PciSI | GCTCTTC | 2 cut(s) | 1713, 3196 |
| PctI | GAATGC | 7 cut(s) | 298, 600, 878, 2552, 2569, 5590, 5831 |
| PdmI | GAANNNNTTC | 3 cut(s) | 918, 1134, 2193 |
| PflMI | CCANNNNNTGG | 6 cut(s) | 149, 1602, 2953, 3044, 3435, 3686 |
| PfoI | TCCNGGA | 1 cut(s) | 2358 |
| PinAI | ACCGGT | 2 cut(s) | 410, 5736 |
| PleI | GAGTC | 9 cut(s) | 2131, 2628, 2695, 3131, 3205, 4105, 4682, 4712, 5861 |
| PmaCI | CACGTG | 1 cut(s) | 5135 |
| PmlI | CACGTG | 1 cut(s) | 5135 |
| PpsI | GAGTC | 9 cut(s) | 2131, 2628, 2695, 3131, 3205, 4105, 4682, 4712, 5861 |
| Ppu21I | YACGTR | 2 cut(s) | 5135, 5792 |
| PpuMI | RGGWCCY | 2 cut(s) | 2819, 2882 |
| PscI | ACATGT | 1 cut(s) | 3159 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2619 |
| PsiI | TTATAA | 2 cut(s) | 1289, 4008 |
| Psp124BI | GAGCTC | 1 cut(s) | 3571 |
| Psp5II | RGGWCCY | 2 cut(s) | 2819, 2882 |
| PspCI | CACGTG | 1 cut(s) | 5135 |
| PspFI | CCCAGC | 1 cut(s) | 1706 |
| PspN4I | GGNNCC | 9 cut(s) | 1607, 2821, 2883, 2884, 3441, 3741, 4192, 4940, 5320 |
| PspPPI | RGGWCCY | 2 cut(s) | 2819, 2882 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1080, 1112, 3289, 3321 |
| PstI | CTGCAG | 3 cut(s) | 185, 3910, 5353 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1240, 2155, 5572 |
| PsuI | RGATCY | 8 cut(s) | 3034, 3108, 3199, 3280, 3439, 3490, 3514, 4287 |
| PvuII | CAGCTG | 3 cut(s) | 3854, 4307, 5618 |
| RseI | CAYNNNNRTG | 9 cut(s) | 474, 1170, 2097, 2210, 2519, 4095, 4531, 4608, 5528 |
| SacI | GAGCTC | 1 cut(s) | 3571 |
| SapI | GCTCTTC | 2 cut(s) | 1713, 3196 |
| ScaI | AGTACT | 1 cut(s) | 2166 |
| SchI | GAGTC | 9 cut(s) | 2131, 2629, 2696, 3131, 3205, 4105, 4682, 4713, 5861 |
| SduI | GDGCHC | 7 cut(s) | 399, 2304, 2730, 3571, 4195, 4847, 5188 |
| SexAI | ACCWGGT | 2 cut(s) | 2665, 2679 |
| SfcI | CTRYAG | 6 cut(s) | 181, 2118, 3095, 3906, 4617, 5349 |
| SfuI | TTCGAA | 1 cut(s) | 290 |
| SinI | GGWCC | 4 cut(s) | 152, 1605, 2819, 2882 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 474, 1170, 2097, 2210, 2519, 4095, 4531, 4608, 5528 |
| SmlI | CTYRAG | 6 cut(s) | 2171, 2557, 2876, 3213, 4679, 4690 |
| SmoI | CTYRAG | 6 cut(s) | 2171, 2557, 2876, 3213, 4679, 4690 |
| SpeI | ACTAGT | 1 cut(s) | 2390 |
| SphI | GCATGC | 1 cut(s) | 4234 |
| SseBI | AGGCCT | 1 cut(s) | 637 |
| SsiI | CCGC | 9 cut(s) | 255, 1007, 3612, 4035, 4770, 5315, 5337, 5549, 5754 |
| SspI | AATATT | 2 cut(s) | 2831, 3091 |
| SstI | GAGCTC | 1 cut(s) | 3571 |
| StuI | AGGCCT | 1 cut(s) | 637 |
| StyI | CCWWGG | 5 cut(s) | 3434, 3586, 3923, 3940, 5862 |
| TaaI | ACNGT | 9 cut(s) | 245, 373, 1532, 2461, 2674, 3711, 4864, 4977, 5503 |
| TaiI | ACGT | 5 cut(s) | 3186, 4127, 5137, 5344, 5794 |
| TatI | WGTACW | 5 cut(s) | 2164, 3400, 3954, 4159, 4876 |
| TauI | GCSGC | 1 cut(s) | 5757 |
| TseFI | GTSAC | 6 cut(s) | 2134, 2151, 2371, 2759, 3134, 3847 |
| Tsp45I | GTSAC | 6 cut(s) | 2134, 2151, 2371, 2759, 3134, 3847 |
| TspGWI | ACGGA | 2 cut(s) | 2605, 4175 |
| Van91I | CCANNNNNTGG | 6 cut(s) | 149, 1602, 2953, 3044, 3435, 3686 |
| Vha464I | CTTAAG | 1 cut(s) | 2557 |
| VpaK11BI | GGWCC | 4 cut(s) | 152, 1605, 2819, 2882 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2243, 2268 |
| XapI | RAATTY | 9 cut(s) | 286, 421, 918, 1257, 2354, 2713, 4925, 5125, 5491 |
| XbaI | TCTAGA | 1 cut(s) | 1667 |
| XceI | RCATGY | 6 cut(s) | 1553, 2096, 2974, 3163, 4234, 5768 |
| XcmI | CCANNNNNNNNNTGG | 5 cut(s) | 194, 875, 2078, 3124, 3683 |
| XmiI | GTMKAC | 2 cut(s) | 3180, 4571 |
| XmnI | GAANNNNTTC | 3 cut(s) | 918, 1134, 2193 |
| ZrmI | AGTACT | 1 cut(s) | 2166 |
| Zsp2I | ATGCAT | 3 cut(s) | 4480, 4648, 5418 |