Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013413

Physical Location & Seq

Genomic Coordinates Forward (+)

25878616 .. 25881052

Gene Structure 2437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G238000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 564 bp

ATGAGTGATGCAATTGATTTGAGCGGGGATGGAGGGGTCCTCAAGAAAATTGTAAGGCATGCAAAACCAGATGCAATTGCTCCGACCCAAGACCTTCCCCTCGTTGATGTTCATTATGAAGGCATTCTTGAGGAAACCAACGAAGTTTTTGATACGACACATGAAGATAACACGGTTTTCTCATTTGAGCTGGGGAAGGGCAGTGTAATCAAGGCTTGGGATATTGCAGTGAAAACCATGAAGGTTGGGGAGATTGCTAAAATCACTTGCAAGCCAGAATATGCCTATGGAAGTGCGGGTTCTCCACCAGATATTCCACCAGAGGCAACCCTTATATTTGAGGTGGAGTTGGTGGCTTGCAATCCACGGAAGGGATTAAGTTTGGGTAGTGCCTCAGAAGAAAGGGCCAGGCTAGAAGAACTGAAGAAGCAGAGGGAGATGGCTGCTGCAAACAAAGAGGAAGAGAAGAAGAAGAGAGAAGAGGCGAAAGCTGCTGCTGCTGCTCGTATTCAAGCTAAGTTAGATGCCAAGAAGGGTGGAAAGGGAAAAGGCAAAGGAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

188

Amino Acids

20.17

Weight (kDa)

6.36

Isoelectric Point (pI)

33.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55520 AT3G55520 AT3G55520
fragaria_vesca	FvH4_7g22820
malus_domestica	MD01G1136400.v1.1 MD07G1201400.v1.1
prunus_persica	Prupe.2G238000_v2.0.a1
pyrus_communis	pycom07g18830
rosa_chinensis	RchiOBHm_Chr1g0367961
rosa_laevigata	RLG00000027253
rosa_multiflora	Rmu_co8515997.1_g000001
rosa_roxburghii	Rroxscaffold_4G00289050
rosa_rugosa	Rorug01G0337800
rosa_samantha	Rh1AG344600 Rh1BG306900 Rh1CG322500 Rh1DG339000
rosa_wichuraiana	Rw1G030680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	24
AciI	CCGC	2 cut(s)	24, 296
AcuI	CTGAAG	1 cut(s)	443
AfiI	CCNNNNNNNGG	1 cut(s)	371
AgsI	TTSAA	1 cut(s)	512
AjnI	CCWGG	1 cut(s)	407
AluBI	AGCT	3 cut(s)	190, 491, 515
AluI	AGCT	3 cut(s)	190, 491, 515
AoxI	GGCC	1 cut(s)	405
ApeKI	GCWGC	6 cut(s)	443, 446, 491, 494, 497, 500
Asp700I	GAANNNNTTC	1 cut(s)	123
AspS9I	GGNCC	2 cut(s)	37, 405
AvaII	GGWCC	1 cut(s)	37
BbvI	GCAGC	6 cut(s)	430, 433, 478, 481, 484, 487
BccI	CCATC	2 cut(s)	23, 433
BciT130I	CCWGG	1 cut(s)	409
BfaI	CTAG	1 cut(s)	413
BisI	GCNGC	6 cut(s)	444, 447, 492, 495, 498, 501
BlsI	GCNGC	6 cut(s)	445, 448, 493, 496, 499, 502
Bme1390I	CCNGG	1 cut(s)	409
Bme18I	GGWCC	1 cut(s)	37
BmgT120I	GGNCC	2 cut(s)	37, 405
BmiI	GGNNCC	1 cut(s)	38
BmrFI	CCNGG	1 cut(s)	409
BmsI	GCATC	2 cut(s)	61, 514
BplI	GAGNNNNNCTC	2 cut(s)	24, 56
BpuEI	CTTGAG	2 cut(s)	26, 149
BsaJI	CCNNGG	1 cut(s)	365
Bsc4I	CCNNNNNNNGG	1 cut(s)	371
BseBI	CCWGG	1 cut(s)	409
BseDI	CCNNGG	1 cut(s)	365
BseGI	GGATG	1 cut(s)	34
BseLI	CCNNNNNNNGG	1 cut(s)	371
BseMII	CTCAG	1 cut(s)	408
BseXI	GCAGC	6 cut(s)	430, 433, 478, 481, 484, 487
BseYI	CCCAGC	1 cut(s)	190
BshFI	GGCC	1 cut(s)	407
BslI	CCNNNNNNNGG	1 cut(s)	371
BsmI	GAATGC	1 cut(s)	123
BsnI	GGCC	1 cut(s)	407
BspACI	CCGC	2 cut(s)	24, 296
BspANI	GGCC	1 cut(s)	407
BspCNI	CTCAG	1 cut(s)	407
BspLI	GGNNCC	1 cut(s)	38
BsrBI	CCGCTC	1 cut(s)	24
BssECI	CCNNGG	1 cut(s)	365
Bst2UI	CCWGG	1 cut(s)	409
Bst4CI	ACNGT	1 cut(s)	175
Bst6I	CTCTTC	3 cut(s)	456, 467, 474
BstC8I	GCNNGC	3 cut(s)	60, 272, 358
BstDEI	CTNAG	2 cut(s)	394, 516
BstDSI	CCRYGG	1 cut(s)	365
BstF5I	GGATG	1 cut(s)	34
BstMWI	GCNNNNNNNGC	3 cut(s)	491, 497, 500
BstNI	CCWGG	1 cut(s)	409
BstNSI	RCATGY	1 cut(s)	62
BstSCI	CCNGG	1 cut(s)	407
BstV1I	GCAGC	6 cut(s)	430, 433, 478, 481, 484, 487
BsuRI	GGCC	1 cut(s)	407
BtgI	CCRYGG	1 cut(s)	365
BtsCI	GGATG	1 cut(s)	34
BtsI	GCAGTG	2 cut(s)	208, 234
BtsIMutI	CAGTG	2 cut(s)	208, 234
Cac8I	GCNNGC	3 cut(s)	60, 272, 358
Cfr13I	GGNCC	2 cut(s)	37, 405
CspCI	CAANNNNNGTGG	2 cut(s)	517, 552
CviAII	CATG	3 cut(s)	59, 161, 238
CviJI	RGCY	9 cut(s)	190, 215, 274, 356, 407, 412, 443, 491, 515
CviKI_1	RGCY	9 cut(s)	190, 215, 274, 356, 407, 412, 443, 491, 515
DdeI	CTNAG	2 cut(s)	394, 516
Eam1104I	CTCTTC	3 cut(s)	456, 467, 474
EarI	CTCTTC	3 cut(s)	456, 467, 474
Eco47I	GGWCC	1 cut(s)	37
Eco57I	CTGAAG	1 cut(s)	443
EcoO109I	RGGNCCY	1 cut(s)	37
EcoRII	CCWGG	1 cut(s)	407
FaeI	CATG	3 cut(s)	62, 164, 241
FaiI	YATR	7 cut(s)	60, 117, 162, 239, 282, 288, 335
FalI	AAGNNNNNCTT	2 cut(s)	111, 143
FatI	CATG	3 cut(s)	58, 160, 237
FauI	CCCGC	2 cut(s)	17, 289
Fnu4HI	GCNGC	6 cut(s)	444, 447, 492, 495, 498, 501
FokI	GGATG	1 cut(s)	41
Fsp4HI	GCNGC	6 cut(s)	444, 447, 492, 495, 498, 501
FspBI	CTAG	1 cut(s)	413
GluI	GCNGC	6 cut(s)	444, 447, 492, 495, 498, 501
GsaI	CCCAGC	1 cut(s)	194
HaeIII	GGCC	1 cut(s)	407
Hin1II	CATG	3 cut(s)	62, 164, 241
Hpy188I	TCNGA	2 cut(s)	84, 397
Hpy188III	TCNNGA	2 cut(s)	43, 128
HpyAV	CCTTC	6 cut(s)	104, 113, 190, 235, 364, 526
HpyCH4III	ACNGT	1 cut(s)	175
HpyCH4V	TGCA	7 cut(s)	11, 62, 74, 227, 270, 360, 449
HpyF10VI	GCNNNNNNNGC	3 cut(s)	491, 497, 500
HpyF3I	CTNAG	2 cut(s)	394, 516
Hsp92II	CATG	3 cut(s)	62, 164, 241
LmnI	GCTCC	1 cut(s)	85
LpnPI	CCDG	7 cut(s)	81, 176, 288, 321, 333, 394, 421
Lsp1109I	GCAGC	6 cut(s)	430, 433, 478, 481, 484, 487
LweI	GCATC	2 cut(s)	61, 514
MaeI	CTAG	1 cut(s)	413
MbiI	CCGCTC	1 cut(s)	24
MboII	GAAGA	9 cut(s)	176, 410, 428, 436, 473, 478, 481, 484, 491
MfeI	CAATTG	2 cut(s)	12, 75
MluCI	AATT	3 cut(s)	12, 48, 75
MmeI	TCCRAC	1 cut(s)	107
MroXI	GAANNNNTTC	1 cut(s)	123
MseI	TTAA	1 cut(s)	377
MspR9I	CCNGG	1 cut(s)	409
MunI	CAATTG	2 cut(s)	12, 75
Mva1269I	GAATGC	1 cut(s)	123
MvaI	CCWGG	1 cut(s)	409
MwoI	GCNNNNNNNGC	3 cut(s)	491, 497, 500
NlaIII	CATG	3 cut(s)	62, 164, 241
NlaIV	GGNNCC	1 cut(s)	38
NspI	RCATGY	1 cut(s)	62
PaeI	GCATGC	1 cut(s)	62
PctI	GAATGC	1 cut(s)	123
PdmI	GAANNNNTTC	1 cut(s)	123
PkrI	GCNGC	6 cut(s)	445, 448, 493, 496, 499, 502
PpuMI	RGGWCCY	1 cut(s)	37
Psp5II	RGGWCCY	1 cut(s)	37
Psp6I	CCWGG	1 cut(s)	407
PspFI	CCCAGC	1 cut(s)	190
PspGI	CCWGG	1 cut(s)	407
PspN4I	GGNNCC	1 cut(s)	38
PspPI	GGNCC	2 cut(s)	37, 405
PspPPI	RGGWCCY	1 cut(s)	37
SaqAI	TTAA	1 cut(s)	377
SatI	GCNGC	6 cut(s)	444, 447, 492, 495, 498, 501
Sau96I	GGNCC	2 cut(s)	37, 405
ScrFI	CCNGG	1 cut(s)	409
SetI	ASST	6 cut(s)	96, 192, 246, 345, 493, 517
SfaNI	GCATC	2 cut(s)	61, 514
SinI	GGWCC	1 cut(s)	37
SmlI	CTYRAG	2 cut(s)	41, 128
SmoI	CTYRAG	2 cut(s)	41, 128
SphI	GCATGC	1 cut(s)	62
Sse9I	AATT	3 cut(s)	12, 48, 75
SsiI	CCGC	2 cut(s)	24, 296
SspMI	CTAG	1 cut(s)	413
StyD4I	CCNGG	1 cut(s)	407
TaaI	ACNGT	1 cut(s)	175
TasI	AATT	3 cut(s)	12, 48, 75
Tru1I	TTAA	1 cut(s)	377
Tru9I	TTAA	1 cut(s)	377
TscAI	CASTG	2 cut(s)	208, 234
TseI	GCWGC	6 cut(s)	443, 446, 491, 494, 497, 500
TspDTI	ATGAA	4 cut(s)	101, 132, 177, 254
TspGWI	ACGGA	1 cut(s)	382
TspRI	CASTG	2 cut(s)	208, 234
VpaK11BI	GGWCC	1 cut(s)	37
XceI	RCATGY	1 cut(s)	62
XmnI	GAANNNNTTC	1 cut(s)	123
XspI	CTAG	1 cut(s)	413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.