Rorug01G0337800

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
45580952 .. 45589492
8541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0337800.1

Sequence Viewer

Length: 4815 bp
ATGGGTGACGTTAAGATACCAAATTGGCTTAAAGGGTTGCCATTGGCGCCCGAGTTTCATCCAACGCATACCGAATTTGCTGACCCAATTGCTTATATATCGAAAATTGAGAAGGAAGCTAGTGAATTTGGTATTTGCAAGATTATCCCACCATTGCCGAAACCTTCCAAGAGATATGTTTTTAGTAACTTGAATAAGTCACTTGCTAAGCGGCCCGAATTGGGTTCTGATTTGATCCCTGGGAATGATGGTGATGCTGTGAAAGTGGGTTCTGGGGATGGTAGTAATGATGGGGAGGTTAGGGCAGTGTTTACCACTAGGCACCAAGAACTGGGGCAGACTGTGAAAAGAGCAAAAGGGGCGGGTGTTCAGGAACCGCCGCCATCGGGTGTTGATAAGCAAGTGTGGCAAAGTGGGGAGGTTTATACTTTAGAGCAGTTTGAGTCTAAGTCCAGAGCTTTTGCAAGGAGCATTTTAGGTACAATTAGAGATGTATCTCCATTGATTGTAGAGGAAATGTTTTGGAAGGCAGCTTCTGAGAAGCCGATATATATTGAGTATGCCAATGATGTGCCTGGGTCTGCTTTTGAAGAACCGGAGGGTCTGTTGTGCTATTCACGTAGGCGGAGGAGGAAGAGGAATTCCTACCACAGAAGTGGACCAAACTCTGACAGCAAGAAAAGTGAAATGATTAGCAGTTGTGAAAGAAACTCCCAAAATGGTGAAGTTGAGGATGCTTCCCCTAAAAATGTTTCACTTACATCCGTGGAGGTACCCAAATCATCTGCTTCACCGGGAATAGTGTCAACAGATGAAACTTCTCAATCTTCTAGGAAAAAAAGTCAAAATTCTTCTTGTGACGTGGAAGGTACTGCTGGTTGGAAGCTTTCAAACAGTCCATGGAACTTACAAGTCATTGCACGCTCACCTGGGTCACTTACTCGTTTCATGCCGGATGATATCCCTGGTGTTACTTCTCCTATGGTTTACATCGGCATGTTGTTCAGCTGGTTTGCTTGGCACGTTGAAGATCATGAGCTTCACAGCATGAATTTTCTGCACAATGGATCTGCAAAGACTTGGTATTCTGTTCCTGGAGATTATGCATTTGCTTTTGAGGAACTTATTCGCACTGAGGCATATGGTGGTACTGCTGACCGTCTAGCTGCTCTCTCACTATTGGGTAATAAAACAACTTTAATGTCACCTGAGGTAGTTATCGCATCGGGAATTCCGTGTTGCAGGTTAATACAGAATCCTGGTGAATTTGTTGTGACTTTTCCAAGGGCTTACCATGTAGGATTCAGTCACGGTTTCAATTGTGGAGAAGCTGCTAACTTTGGAACACCACAATGGCTTAAAGTGGCTAAAGAAGCTGCAGTACGTAGAGCTGCTATGAATTATCTTCCTATGCTCTCCCATCAACAGCTGCTATACCTCTCGACTATGTCTTTTGTTTCAAGAGTGCCGAAGTCCCTACTACCAGGTGTGCGGAGTTCCCGTATGAGAGATAGGCAAAAGGAAGACAGAGAGCTATCAGTAAAGAAGGCTTTTATTGAAGATATTTTAAATGAGAACGATGTGTTATCTGCTCTTCTTGGGAAAGAATCAAGTTTCCGTGCAGTATTATGGAATCCTGATTTACTTCCAAATGCAAGTAAAGAGTCTTCCATACCCACTGCAAGTGCTCCTGTTGATACGAATTCAAAAGAAAATGCTACGGATACTCAGGGTGGAAATAGTACTAATGATCAGAACTTTCTGGTAGATGAGATGAGTTTGTACATGGAAAATCTTAACGATTTATATTTGGGCAGCGATGATTTGTCTGATGACTTCCAAGTTGACTCGGGAACGTTGGCATGTGTGGCATGTGGGATACTTGGGTTTCCATTTATGTCTGTGGTGCAACCATCTGAGAAAGCATCAATGGAACTTCAGCCTGAATGTATCTTGGCTCAAGAATTGCCTGGAGTTTCAGGCAATTCTCATATCTCTCCAGAGCATTGCGAATCTTTCAAAGGCTGTGCTACAGAGGATCTCTCGCCTATTTCCAATGCTTTTCCACATGCAAAGGATCCCGTCTTACCTTGCACAACAAGGTTTAACAACTGTTGGAATACTGTTGATAAATTTCTGAGACCACGGAGTTTCTGTCTTGAACATGCTGTTGAAACTTTGGAGCTGTTGCAGTGTAAAGGTGGAGCAAACATGCTTGTGATTTGCCATTCTGACTATCAGAAAATAAAGGCTCCTGCTGCAGCCATTGCAGAAGAAATTGGTTGCCCTTTTAACTATAACGAGGTTCCATTGGACATTGCCTCAAATGAAGATTTGAACTTGATAGATCTTGCTGTCGATGATGGACGTGATGAATGTGGAGAAGATTGGACCTCAAAGTTGGGTATCAACCTACGGTACTGTGTCAAGGTCAGAAAAAGTTCTTCCTCGAAGCGAGTCCAGCATGCATTGGCATTGGGTGAAGTGTTCTCTAAACAAAGTCGCAGCTCAGAATTTCTGGCCGTTAACTGGAAATCTAGAAGATCTCGGACGAAGAAGGTTTATCTAGATGCCCCTTACAAACAATGTGACAGCATTGACAAAAAGAAGGAAGAAGTGGTGGAGACAAAGTCAGCAGATGCCACCTCTTTTAAAAGGGAAGCAAAAATAATTCAATATTCAAGAAGGAATAAGCGAAAACCAAGTACTTCTACAGGGGCAGGTAGGGTTGTTGAGCACCCTGCTACTTCTGAAGAGCTTGATAAACATAGCAGGAGGGCATCAGATAATAGCATTTACAACAATGGGAAGTCCACCAGCATATGTGCAAGGTTGGACTCATTTACAGCAGATGGTACTGAAATGCATCCTGATGTCCAGATGCTTGAAGCCACCAGGGATATCTGTTTGGACTCTACTCTTTCACAAGTTGCGGATACAGTTGCCTTGACAGCTGGAAGTGCTGACGCACAGATTGAAAATCGCAGTTTGGAAGGGAGGAACATGAACGGTGGAGGTTGTAATCTAGCAGCAAGCGAGTCAGATATGCAAGATGAGATCAAGATCCTTAAAGAAGCCAGGCAGAACAACTCAATTATTCCACTTGTCATTGCACGTGATGAAAGGTCTGAAAAGCATAGAGGGGAACAGGAAAACGAAAAATTGAACAAAAACGATGACAATTGTAATCTGGTGTCTGAAGGCCAGTCCCAACTTTGGTCTCAGGAGGATGTTCTTATGAATGTGGTTTCTGTTTTCACCAAATCAACAAACTTATCTGCTGCTGACTCAATTGTGACAAGTTCCGAGGAACAGATCGTCAATGCAGTCATTGAGAAATCTTGTGTGAATAGTGAAGTTTGTGAATCTATGACTTTGGGTGATGAAGTGCAGCAAGAAATCCAAACTACTAACAGAAGTAACGACAAGGCACCAGTTTCATGTAGTTCCACGCTGTTGAATGATCCAACCTTTGCTGCAGCTGAATGTCGTGTTGAATTTGAAGGAGAGACTCATATTGTAGAAGAATTTAGCAATGTTGTTTCTTCAGAATTCAAACCAGAAGAAGATATTGAGATTCCAAAAGGAAGATATGAGGAACCCAGTTTAAGTCCTACCAGACGAGTCGGTCAACACTCTCCTGCTTCTACAGACAGATTGTCTGGAGTTGCAAAGGCGTTCTGTGCTGCAGCAGATTTTCAGCCAGGCCCAACTTCACATAGTGAAGAATTTCAGGCTGCAGATAGAACTAGTGAGGGGGAATACATCTCTTCTTCAATGATAAAGATGGAAGAAACTCATCCCTTGTCATTGGAAGAATCTTCTGAAGTTCCAAGAGGAAACTCTTTGGAGGAAGGCACGAGCAATGGTGTGACTTCAGCCACTCTAGTTCAGCAAGATGCCCAAACTAAAAATGTAGCTGTGGAGGCACCTGGTCATAATTTTGTTGTACGAGAAGAAAATCAGCCTATACCTGTCTCGGTTGAAGATGAAGTTCCCAGAGTGAGCTGTGCAACAGATGTGACCTTGGATGATAAAGAACGGTGGACAAACTCGGACAGTAATAAGGAACTCATTGCTAGTCATGATACTTCAAAATGCGAGCCGTCTCGTGTTACAATTAAAACATACTTTAGAGTTAGAAGAGGGAGCCGTGCTGAAGTTTGTATATCACAACATGATAGAGAGCTGGGAAACATTGAGCCTTCCATTTTAGACCCCAGACCAAGTCCTGAAATTGGAAGTAAAAGAAAGAGAGGAGTGGGGCAGAAAATGGATGACAACTCCAACTTCAATGGATATATTAGGGGGCCATGTGAAGGTCTGAGACCAAGGGCTGGGAAGGATGCAACAGTTAGTGGGATAGACATCCACAACCAGGTCGAAGAGAAGCCAGTGGCAAAGAAGGTGAAGAGACCTTCAGATGTTCCCGTTCCTCCCAAGGATAAGAAGAAAGAGCAAGTAAGGAAGCCCCACAGCTGCAACCTAGGGGGCTGTAGCATGAGTTTTCAGACAAAGGAGGAGTTAATGGTGCACAAGCGTAACCGCTGCCCACATGAAGGGTGTGGTAAGAAGTTCAGTTGCCACAAGTATGCAATGGTTCACAGCCGTGTGCATGATAGTGCTAGGCCCTTCAAGTGCCCGTGGAAGGGTTGCTCCATGTCATTCAAGTGGGCATGGGCCCAGACTGAGCATATACGAGTGCACACTGGAGAAAAACCATACAAGTGCAAGGTGGACGGCTGTGGCCTCTCTTTCAGGTTTGTATCAGATTTTAGCCGTCACAGACGGAAAACAGGGCATTATGTGAGCTAA

Protein Analysis

1604

Amino Acids

177.33

Weight (kDa)

5.85

Isoelectric Point (pI)

52.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 17 - 50 5.4e-15 jmjN domain
JmjC PF02373 329 - 447 5.4e-34 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000390)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18050 FvH4_7g18050
malus_domestica MD07G1206200.v1.1 MD07G1206400.v1.1 MD07G1206500.v1.1 MD07G1206700.v1.1 MD07G1207000.v1.1 MD07G1207100.v1.1 MD07G1207200.v1.1
prunus_persica Prupe.2G166200_v2.0.a1 Prupe.2G242000_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242400_v2.0.a1
pyrus_communis pycom07g19260 pycom07g19280 pycom07g19290
rosa_chinensis RchiOBHm_Chr1g0325901 RchiOBHm_Chr1g0325961 RchiOBHm_Chr1g0344281 RchiOBHm_Chr1g0344291 RchiOBHm_Chr1g0344301 RchiOBHm_Chr1g0368771 RchiOBHm_Chr1g0369141 RchiOBHm_Chr1g0369281 RchiOBHm_Chr1g0369291 RchiOBHm_Chr1g0369661 RchiOBHm_Chr1g0370161 RchiOBHm_Chr4g0396401
rosa_laevigata RLG00000009546 RLG00000027070 RLG00000027140 RLG00000027151 RLG00000027152 RLG00000027190 RLG00000027255 RLG00000028909 RLG00000030094 RLG00000030097
rosa_multiflora Rmu_co8196240.1_g000001 Rmu_co8379125.1_g000001 Rmu_co8402573.1_g000001 Rmu_co8479243.1_g000001 Rmu_sc0000019.1_g000019 Rmu_sc0001154.1_g000009 Rmu_sc0001482.1_g000014 Rmu_sc0004250.1_g000009 Rmu_sc0006696.1_g000002 Rmu_sc0006696.1_g000004 Rmu_sc0008679.1_g000018 Rmu_sc0009743.1_g000003 Rmu_sc0013657.1_g000023
rosa_roxburghii Rroxscaffold_4G00286760 Rroxscaffold_4G00287250 Rroxscaffold_4G00287470 Rroxscaffold_4G00287770 Rroxscaffold_4G00287930 Rroxscaffold_4G00309920 Rroxscaffold_4G00324120
rosa_rugosa Rorug01G0055900 Rorug01G0173100 Rorug01G0173200 Rorug01G0337700 Rorug01G0337800 Rorug01G0337800 Rorug01G0337800 Rorug01G0344900 Rorug01G0349400 Rorug01G0349400 Rorug01G0351700 Rorug01G0354500
rosa_samantha Rh1AG072300 Rh1AG189000 Rh1AG189100 Rh1AG351900 Rh1AG356500 Rh1AG359800 Rh1AG363200 Rh1BG059100 Rh1BG155800 Rh1BG306800 Rh1BG315600 Rh1BG319000 Rh1BG320300 Rh1BG326300 Rh1BG326400 Rh1CG071600 Rh1CG174600 Rh1CG174800 Rh1CG322400 Rh1CG330300 Rh1CG334200 Rh1CG339600
rosa_wichuraiana Rw1G005870 Rw1G005900 Rw1G015560 Rw1G031350 Rw1G031470 Rw1G031700 Rw1G031960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3627
Acc36I ACCTGC 2 cut(s) 1233, 2711
Acc65I GGTACC 1 cut(s) 772
AccB1I GGYRCC 5 cut(s) 46, 321, 772, 3430, 3928
AccB7I CCANNNNNTGG 2 cut(s) 331, 4337
AciI CCGC 8 cut(s) 211, 362, 377, 380, 625, 1492, 2933, 4546
AclI AACGTT 1 cut(s) 1856
AclWI GGATC 7 cut(s) 229, 1075, 2046, 2072, 2085, 3058, 3458
AcoI YGGCCR 1 cut(s) 2520
AcuI CTGAAG 8 cut(s) 1922, 2772, 3219, 3531, 3846, 3861, 4179, 4404
AcvI CACGTG 1 cut(s) 3116
AcyI GRCGYC 1 cut(s) 47
AdeI CACNNNGTG 1 cut(s) 3722
AhdI GACNNNNNGTC 1 cut(s) 3658
AhlI ACTAGT 1 cut(s) 3749
AjiI CACGTC 2 cut(s) 862, 2369
AleI CACNNNNGTG 2 cut(s) 654, 4608
Alw21I GWGCWC 4 cut(s) 1690, 2739, 4536, 4707
Alw26I GTCTC 8 cut(s) 2134, 2618, 3225, 3503, 3982, 4113, 4321, 4408
Alw44I GTGCAC 2 cut(s) 4532, 4703
AlwI GGATC 7 cut(s) 229, 1075, 2046, 2072, 2085, 3058, 3458
AlwNI CAGNNNCTG 1 cut(s) 536
Ama87I CYCGRG 2 cut(s) 50, 1849
AoxI GGCC 8 cut(s) 212, 2520, 3202, 3706, 4310, 4628, 4680, 4747
ApaI GGGCCC 1 cut(s) 4684
ApaLI GTGCAC 2 cut(s) 4532, 4703
Asp700I GAANNNNTTC 3 cut(s) 1125, 2440, 3729
Asp718I GGTACC 1 cut(s) 772
AspA2I CCTAGG 1 cut(s) 4486
AspLEI GCGC 1 cut(s) 49
AspS9I GGNCC 8 cut(s) 213, 659, 2391, 3707, 4310, 4629, 4680, 4681
AsuC2I CCSGG 1 cut(s) 795
AvaI CYCGRG 2 cut(s) 50, 1849
AvaII GGWCC 2 cut(s) 659, 2391
AvrII CCTAGG 1 cut(s) 4486
AxyI CCTNAGG 1 cut(s) 1209
BaeGI GKGCMC 4 cut(s) 4536, 4643, 4684, 4707
BaeI ACNNNNGTAYC 2 cut(s) 1871, 1904
BamHI GGATCC 1 cut(s) 2077
BanI GGYRCC 5 cut(s) 46, 321, 772, 3430, 3928
BanII GRGCYC 1 cut(s) 4684
BarI GAAGNNNNNNTAC 4 cut(s) 1365, 1397, 1651, 1683
BauI CACGAG 2 cut(s) 3859, 4110
BbrPI CACGTG 1 cut(s) 3116
BbsI GAAGAC 2 cut(s) 1530, 1659
Bbv12I GWGCWC 4 cut(s) 1690, 2739, 4536, 4707
BccI CCATC 9 cut(s) 242, 272, 284, 391, 1428, 1921, 2357, 2846, 3781
BceAI ACGGC 6 cut(s) 2507, 4090, 4137, 4593, 4756, 4764
BciVI GTATCC 3 cut(s) 1717, 1872, 2929
BclI TGATCA 1 cut(s) 1750
BcnI CCSGG 1 cut(s) 795
BcoDI GTCTC 8 cut(s) 2134, 2618, 3225, 3503, 3982, 4113, 4321, 4408
BcuI ACTAGT 1 cut(s) 3749
BfmI CTRYAG 9 cut(s) 1377, 2031, 2259, 2712, 3477, 3648, 3687, 3738, 4495
BfoI RGCGCY 1 cut(s) 50
BfuAI ACCTGC 2 cut(s) 1233, 2711
BfuI GTATCC 3 cut(s) 1717, 1872, 2929
BglII AGATCT 2 cut(s) 2347, 2543
BlnI CCTAGG 1 cut(s) 4486
BlpI GCTNAGC 1 cut(s) 207
BmcAI AGTACT 2 cut(s) 1744, 2707
Bme18I GGWCC 2 cut(s) 659, 2391
BmeRI GACNNNNNGTC 1 cut(s) 3658
BmeT110I CYCGRG 2 cut(s) 50, 1849
BmgBI CACGTC 2 cut(s) 862, 2369
BmgT120I GGNCC 8 cut(s) 213, 659, 2391, 3707, 4310, 4629, 4680, 4681
BmrI ACTGGG 2 cut(s) 341, 3597
BmuI ACTGGG 2 cut(s) 341, 3597
BpiI GAAGAC 2 cut(s) 1530, 1659
BplI GAGNNNNNCTC 2 cut(s) 2027, 2059
BpmI CTGGAG 5 cut(s) 1116, 1983, 1992, 3684, 4731
Bpu1102I GCTNAGC 1 cut(s) 207
BpuEI CTTGAG 1 cut(s) 1944
BpuMI CCSGG 1 cut(s) 795
BsaAI YACGTR 3 cut(s) 620, 1385, 3116
BsaBI GATNNNNATC 2 cut(s) 3062, 4367
BsaHI GRCGYC 1 cut(s) 47
BsaI GGTCTC 4 cut(s) 2134, 3225, 4321, 4408
BsaWI WCCGGW 1 cut(s) 595
BsaXI ACNNNNNCTCC 8 cut(s) 590, 620, 1486, 1516, 2140, 2170, 2615, 2645
Bse1I ACTGG 7 cut(s) 336, 2534, 3205, 3434, 3603, 4394, 4714
Bse21I CCTNAGG 1 cut(s) 1209
Bse8I GATNNNNATC 2 cut(s) 3062, 4367
BseJI GATNNNNATC 2 cut(s) 3062, 4367
BseNI ACTGG 7 cut(s) 336, 2534, 3205, 3434, 3603, 4394, 4714
BseRI GAGGAG 3 cut(s) 643, 4272, 4535
BseSI GKGCMC 4 cut(s) 4536, 4643, 4684, 4707
BseYI CCCAGC 2 cut(s) 4189, 4337
BsgI GTGCAG 3 cut(s) 1043, 1641, 3410
BshFI GGCC 8 cut(s) 214, 2522, 3204, 3708, 4312, 4630, 4682, 4749
BshNI GGYRCC 5 cut(s) 46, 321, 772, 3430, 3928
BsiHKAI GWGCWC 4 cut(s) 1690, 2739, 4536, 4707
BsiHKCI CYCGRG 2 cut(s) 50, 1849
BsiSI CCGG 3 cut(s) 596, 794, 953
BslFI GGGAC 2 cut(s) 1459, 3193
BsmAI GTCTC 8 cut(s) 2134, 2618, 3225, 3503, 3982, 4113, 4321, 4408
BsmBI CGTCTC 1 cut(s) 4113
BsmFI GGGAC 2 cut(s) 1459, 3193
BsnI GGCC 8 cut(s) 214, 2522, 3204, 3708, 4312, 4630, 4682, 4749
Bso31I GGTCTC 4 cut(s) 2134, 3225, 4321, 4408
BsoBI CYCGRG 2 cut(s) 50, 1849
Bsp120I GGGCCC 1 cut(s) 4680
Bsp1286I GDGCHC 6 cut(s) 1690, 2739, 4536, 4643, 4684, 4707
Bsp1407I TGTACA 1 cut(s) 1782
Bsp1720I GCTNAGC 1 cut(s) 207
Bsp19I CCATGG 1 cut(s) 899
BspACI CCGC 8 cut(s) 211, 362, 377, 380, 625, 1492, 2933, 4546
BspANI GGCC 8 cut(s) 214, 2522, 3204, 3708, 4312, 4630, 4682, 4749
BspHI TCATGA 2 cut(s) 1033, 4084
BspMAI CTGCAG 5 cut(s) 1381, 2263, 3481, 3691, 3742
BspMI ACCTGC 2 cut(s) 1233, 2711
BspPI GGATC 7 cut(s) 229, 1075, 2046, 2072, 2085, 3058, 3458
BspQI GCTCTTC 2 cut(s) 1599, 2748
BspT107I GGYRCC 5 cut(s) 46, 321, 772, 3430, 3928
BspTNI GGTCTC 4 cut(s) 2134, 3225, 4321, 4408
BsrGI TGTACA 1 cut(s) 1782
BsrI ACTGG 7 cut(s) 336, 2534, 3205, 3434, 3603, 4394, 4714
BssNI GRCGYC 1 cut(s) 47
BssSI CACGAG 2 cut(s) 3859, 4110
BssT1I CCWWGG 6 cut(s) 899, 1283, 4026, 4331, 4440, 4486
Bst2BI CACGAG 2 cut(s) 3859, 4110
Bst6I CTCTTC 7 cut(s) 629, 1599, 2748, 3775, 4138, 4380, 4406
BstACI GRCGYC 1 cut(s) 47
BstAPI GCANNNNNTGC 1 cut(s) 2267
BstAUI TGTACA 1 cut(s) 1782
BstBAI YACGTR 3 cut(s) 620, 1385, 3116
BstC8I GCNNGC 4 cut(s) 922, 2466, 3034, 4103
BstDSI CCRYGG 4 cut(s) 765, 899, 2144, 4643
BstH2I RGCGCY 1 cut(s) 50
BstHHI GCGC 1 cut(s) 49
BstMAI GTCTC 8 cut(s) 2134, 2618, 3225, 3503, 3982, 4113, 4321, 4408
BstNSI RCATGY 7 cut(s) 1000, 1866, 1875, 2072, 2168, 2215, 2468
BstSFI CTRYAG 9 cut(s) 1377, 2031, 2259, 2712, 3477, 3648, 3687, 3738, 4495
BstSLI GKGCMC 4 cut(s) 4536, 4643, 4684, 4707
BstSNI TACGTA 1 cut(s) 1385
BstV2I GAAGAC 2 cut(s) 1530, 1659
BstX2I RGATCY 6 cut(s) 1067, 2038, 2077, 2347, 2543, 3063
BstXI CCANNNNNNTGG 1 cut(s) 656
BstYI RGATCY 6 cut(s) 1067, 2038, 2077, 2347, 2543, 3063
Bsu36I CCTNAGG 1 cut(s) 1209
BsuI GTATCC 3 cut(s) 1717, 1872, 2929
BsuRI GGCC 8 cut(s) 214, 2522, 3204, 3708, 4312, 4630, 4682, 4749
BtgI CCRYGG 4 cut(s) 765, 899, 2144, 4643
BtgZI GCGATG 1 cut(s) 1833
BtrI CACGTC 2 cut(s) 862, 2369
BtsI GCAGTG 3 cut(s) 312, 1677, 2198
BtsIMutI CAGTG 6 cut(s) 312, 1131, 1677, 2198, 4401, 4707
BveI ACCTGC 2 cut(s) 1233, 2711
Cac8I GCNNGC 4 cut(s) 922, 2466, 3034, 4103
CaiI CAGNNNCTG 1 cut(s) 536
CciI TCATGA 2 cut(s) 1033, 4084
CfoI GCGC 1 cut(s) 49
Cfr13I GGNCC 8 cut(s) 213, 659, 2391, 3707, 4310, 4629, 4680, 4681
CseI GACGC 1 cut(s) 2975
CsiI ACCWGGT 3 cut(s) 1483, 3931, 4377
DinI GGCGCC 1 cut(s) 48
DraI TTTAAA 2 cut(s) 1569, 2653
DraIII CACNNNGTG 1 cut(s) 3722
DrdI GACNNNNNNGTC 1 cut(s) 3627
DriI GACNNNNNGTC 1 cut(s) 3658
DseDI GACNNNNNNGTC 1 cut(s) 3627
EaeI YGGCCR 1 cut(s) 2520
Eam1104I CTCTTC 7 cut(s) 629, 1599, 2748, 3775, 4138, 4380, 4406
Eam1105I GACNNNNNGTC 1 cut(s) 3658
EarI CTCTTC 7 cut(s) 629, 1599, 2748, 3775, 4138, 4380, 4406
EciI GGCGGA 1 cut(s) 640
Eco105I TACGTA 1 cut(s) 1385
Eco130I CCWWGG 6 cut(s) 899, 1283, 4026, 4331, 4440, 4486
Eco24I GRGCYC 1 cut(s) 4684
Eco31I GGTCTC 4 cut(s) 2134, 3225, 4321, 4408
Eco32I GATATC 2 cut(s) 961, 2902
Eco47I GGWCC 2 cut(s) 659, 2391
Eco57I CTGAAG 8 cut(s) 1922, 2772, 3219, 3531, 3846, 3861, 4179, 4404
Eco72I CACGTG 1 cut(s) 3116
Eco81I CCTNAGG 1 cut(s) 1209
Eco88I CYCGRG 2 cut(s) 50, 1849
EcoO109I RGGNCCY 1 cut(s) 4629
EcoRI GAATTC 4 cut(s) 640, 1230, 1702, 3551
EcoRV GATATC 2 cut(s) 961, 2902
EcoT14I CCWWGG 6 cut(s) 899, 1283, 4026, 4331, 4440, 4486
EcoT22I ATGCAT 3 cut(s) 1108, 2470, 2868
EcoT38I GRGCYC 1 cut(s) 4684
EgeI GGCGCC 1 cut(s) 48
EheI GGCGCC 1 cut(s) 48
ErhI CCWWGG 6 cut(s) 899, 1283, 4026, 4331, 4440, 4486
Esp3I CGTCTC 1 cut(s) 4113
FaqI GGGAC 2 cut(s) 1459, 3193
FauI CCCGC 1 cut(s) 355
FauNDI CATATG 2 cut(s) 1141, 2822
FbaI TGATCA 1 cut(s) 1750
FriOI GRGCYC 1 cut(s) 4684
GlaI GCGC 1 cut(s) 48
GsaI CCCAGC 2 cut(s) 4193, 4341
GsuI CTGGAG 5 cut(s) 1116, 1983, 1992, 3684, 4731
HaeII RGCGCY 1 cut(s) 50
HaeIII GGCC 8 cut(s) 214, 2522, 3204, 3708, 4312, 4630, 4682, 4749
HapII CCGG 3 cut(s) 596, 794, 953
HgaI GACGC 1 cut(s) 2975
HhaI GCGC 1 cut(s) 49
Hin1I GRCGYC 1 cut(s) 47
Hin6I GCGC 1 cut(s) 47
HinP1I GCGC 1 cut(s) 47
HincII GTYRAC 4 cut(s) 807, 1846, 2527, 3632
HindII GTYRAC 4 cut(s) 807, 1846, 2527, 3632
HindIII AAGCTT 1 cut(s) 884
HpaI GTTAAC 1 cut(s) 2527
HpaII CCGG 3 cut(s) 596, 794, 953
HpyCH4IV ACGT 8 cut(s) 9, 619, 861, 1023, 1384, 1856, 2368, 3115
HpySE526I ACGT 8 cut(s) 9, 619, 861, 1023, 1384, 1856, 2368, 3115
Hsp92I GRCGYC 1 cut(s) 47
HspAI GCGC 1 cut(s) 47
KasI GGCGCC 1 cut(s) 46
KpnI GGTACC 1 cut(s) 776
Ksp22I TGATCA 1 cut(s) 1750
KspAI GTTAAC 1 cut(s) 2527
LguI GCTCTTC 2 cut(s) 1599, 2748
LmnI GCTCC 7 cut(s) 468, 1693, 2182, 2204, 2257, 4149, 4661
MabI ACCWGGT 3 cut(s) 1483, 3931, 4377
MaeII ACGT 8 cut(s) 9, 619, 861, 1023, 1384, 1856, 2368, 3115
MfeI CAATTG 4 cut(s) 87, 1318, 3181, 3291
MflI RGATCY 6 cut(s) 1067, 2038, 2077, 2347, 2543, 3063
MhlI GDGCHC 6 cut(s) 1690, 2739, 4536, 4643, 4684, 4707
Mly113I GGCGCC 1 cut(s) 47
MmeI TCCRAC 6 cut(s) 86, 860, 2096, 2814, 3491, 4311
Mph1103I ATGCAT 3 cut(s) 1108, 2470, 2868
MroXI GAANNNNTTC 3 cut(s) 1125, 2440, 3729
MspA1I CMGCKG 6 cut(s) 1008, 1429, 2954, 3482, 4479, 4548
MspI CCGG 3 cut(s) 596, 794, 953
MunI CAATTG 4 cut(s) 87, 1318, 3181, 3291
NarI GGCGCC 1 cut(s) 47
NciI CCSGG 1 cut(s) 795
NcoI CCATGG 1 cut(s) 899
NdeI CATATG 2 cut(s) 1141, 2822
NsiI ATGCAT 3 cut(s) 1108, 2470, 2868
NspI RCATGY 7 cut(s) 1000, 1866, 1875, 2072, 2168, 2215, 2468
OliI CACNNNNGTG 2 cut(s) 654, 4608
PaeI GCATGC 1 cut(s) 2468
PagI TCATGA 2 cut(s) 1033, 4084
PasI CCCWGGG 1 cut(s) 239
PciSI GCTCTTC 2 cut(s) 1599, 2748
PcsI WCGNNNNNNNCGW 1 cut(s) 1232
PdmI GAANNNNTTC 3 cut(s) 1125, 2440, 3729
PfeI GAWTC 8 cut(s) 1255, 1302, 1607, 1633, 2012, 3365, 3577, 3818
PflFI GACNNNGTC 3 cut(s) 1447, 2629, 4227
PflMI CCANNNNNTGG 2 cut(s) 331, 4337
PfoI TCCNGGA 1 cut(s) 1093
PluTI GGCGCC 1 cut(s) 50
PmaCI CACGTG 1 cut(s) 3116
PmlI CACGTG 1 cut(s) 3116
Ppu21I YACGTR 3 cut(s) 620, 1385, 3116
Psp1406I AACGTT 1 cut(s) 1856
PspCI CACGTG 1 cut(s) 3116
PspFI CCCAGC 2 cut(s) 4189, 4337
PspOMI GGGCCC 1 cut(s) 4680
PspPI GGNCC 8 cut(s) 213, 659, 2391, 3707, 4310, 4629, 4680, 4681
PstI CTGCAG 5 cut(s) 1381, 2263, 3481, 3691, 3742
PstNI CAGNNNCTG 1 cut(s) 536
PsuI RGATCY 6 cut(s) 1067, 2038, 2077, 2347, 2543, 3063
PsyI GACNNNGTC 3 cut(s) 1447, 2629, 4227
PvuII CAGCTG 5 cut(s) 1008, 1429, 2954, 3482, 4479
SapI GCTCTTC 2 cut(s) 1599, 2748
Sau96I GGNCC 8 cut(s) 213, 659, 2391, 3707, 4310, 4629, 4680, 4681
ScaI AGTACT 2 cut(s) 1744, 2707
SduI GDGCHC 6 cut(s) 1690, 2739, 4536, 4643, 4684, 4707
SexAI ACCWGGT 3 cut(s) 1483, 3931, 4377
SfcI CTRYAG 9 cut(s) 1377, 2031, 2259, 2712, 3477, 3648, 3687, 3738, 4495
SfoI GGCGCC 1 cut(s) 48
SinI GGWCC 2 cut(s) 659, 2391
SmlI CTYRAG 1 cut(s) 1959
SmoI CTYRAG 1 cut(s) 1959
SnaBI TACGTA 1 cut(s) 1385
SpeI ACTAGT 1 cut(s) 3749
SphI GCATGC 1 cut(s) 2468
SsiI CCGC 8 cut(s) 211, 362, 377, 380, 625, 1492, 2933, 4546
SspDI GGCGCC 1 cut(s) 46
SspI AATATT 1 cut(s) 2678
StyI CCWWGG 6 cut(s) 899, 1283, 4026, 4331, 4440, 4486
TaiI ACGT 8 cut(s) 12, 622, 864, 1026, 1387, 1859, 2371, 3118
TaqI TCGA 5 cut(s) 101, 1442, 2358, 2450, 4383
TaqII GACCGA 1 cut(s) 3617
TatI WGTACW 3 cut(s) 1742, 1782, 2705
TauI GCSGC 2 cut(s) 214, 382
TfiI GAWTC 8 cut(s) 1255, 1302, 1607, 1633, 2012, 3365, 3577, 3818
TscAI CASTG 6 cut(s) 312, 1138, 1684, 2198, 4401, 4714
TspGWI ACGGA 6 cut(s) 754, 1224, 1607, 1736, 2161, 4804
TspRI CASTG 6 cut(s) 312, 1138, 1684, 2198, 4401, 4714
Tth111I GACNNNGTC 3 cut(s) 1447, 2629, 4227
Van91I CCANNNNNTGG 2 cut(s) 331, 4337
VneI GTGCAC 2 cut(s) 4532, 4703
VpaK11BI GGWCC 2 cut(s) 659, 2391
XbaI TCTAGA 2 cut(s) 2537, 2566
XceI RCATGY 7 cut(s) 1000, 1866, 1875, 2072, 2168, 2215, 2468
XmaJI CCTAGG 1 cut(s) 4486
XmnI GAANNNNTTC 3 cut(s) 1125, 2440, 3729
ZrmI AGTACT 2 cut(s) 1744, 2707
Zsp2I ATGCAT 3 cut(s) 1108, 2470, 2868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.