Prupe.2G242100_v2.0.a1

cucumisin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000390
Physical Location & Seq
Forward (+)
26109240 .. 26112919
3680 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G242100.2

Sequence Viewer

Length: 2124 bp
ATGGGGGACAAGCCAAAGCTCGACATTCCCACCACTACCACATTGCCTCTTCATGTAAACATGCTTCAAAACGTAGTTGGCAGCAGCAATATTGAACAAGAACCTCACCTACTGCACAGCTACAAGAGAAGCTTCAATGGCTTTGCTGCAAAGCTAACAGAGGAAGAAGCTCAGAAAATGGCTGGAATGGCTGGTGTGGTGTCTGTTTTCCCTAGTAGGAAGCAGAAGCTCCACACAACAAGGTCATGGAACTTCATCGGGTTTCATGAAAACGTGAAGAGAAGCACTGTTGAAAGCGATATCATCGTTGGGATGATCGACTCTGGAGTTTGGCCTGAATCTGCCAGCTTCAGTGATGCCGGGTTCGGCCCACCACCCAAAAAATGGAAAGGCACATGCCAAGGCTCATCCAATTTTACTTGCAACAAAAAAATCATTGGAGCACGGTATTACCACAATGGTAGACCTTTCGTCAAAGGTGACATCAAGTCCCCACGAGACTCGAATGGTCATGGAACCCACACTGCATCAACGGCGGCAGGAAACTTAGTTAGCAAAGCAAGTCTATTTGGTTTGGGGTCGGGGAGAGCAAGAGGAGGGGTCCCATCAGCACGTATTGCAGTGTACAAAGTAGGTTGGTCGGATGGTATTAGTGACGATGATATTCTAGCGGCATTTGATGATGCGATCGCGGATGGTGTCGACATACTATCTCTCTCCCTCGGAAAGGCTGAGGACGATTATTTCAGGGACTCAATTTCCATTGGAGCCTTTCACGCTTTAAGAAAAGGAATTCTGACTTCCACTGCTGCTGGGAACGACGGTCCAGGCCCCAAGACCATCGCAAACTTTGCGCCATGGTTTCTTTCTGTGGCTGCAACCACCATAGATCGGGAGTTTGTTACCAAGGTTCAATTGGGTAACCAAAAAATCTATGAGGGAATTGTAACAAACACATTTGACCTCAAGGGCAAGTTCTATCCTCTAATATATGCTGGAGACGCACCCAATAGGACAGCAGGCTACGACGAGTCTACATCTAAGACATGCGAACCAGGCACGTTAGACCACAATTTGGTGAAGGGCAAGATTGTTCTTTGCGATGGGACGACTGGCTATGGGGCCTATTTTGCAGGTGCAGTTGGAGTTATTTTGCAAAGCCGACCTGTTGCAGATGTGCTTGACCCTCTTCCCATGCCTGCCTCTTGCCTTGGTTTGGATAGTGGTAACAGCATTTACTATTACATTACCTCAACAAGGAACCCAACTGCAACAATTTTTAAAAGTACTGAGGATATTGACACACTGTCCCCATATGTGCCATCCTTCTCATCAAGGGGTCCTAATCCAGTCACTCCCAACATTCTCAAGCCAGATATAGCTGCTCCGGGAGCTTCTATTTTGGCAGCATTTCCTCCAATTGCCCCCGTTTCGTTTGTTCAAGGAGATGACAGAGTAGCATCATACAATTTCGTCTCAGGGACATCAATGGCTTGCCCACATGCCACTGGGGTAGCTGCATACGTCAAATCATTTCACCCCAATTGGTCTCCTGCTGCTATCCAATCCGCTATTATTACCACCGCTAAACCCCTGAGTCCCGATCTTAACCCTGAAGCCGAATTTGCATATGGAGCTGGCCAAATTGACCCCGTTAGGGCTCCATATCCTGGTTTGGTATATGATGCTACTGAACTGGACTACATAGAATTTTTGTGTGCACAAGGCTATAGTACCAAATTATTGCAATCTATTACAGGGCACAAGAGTAGCTGCTCATCAAAAACTAATTATGGAGCACTCAGTGATAATTTGAATTATCCTTCTTTTGCACTTTCCTCCTCTAATCCAAACTGCATCAGTGGGGTTTTCAATAGGACAGCCACAAATGTTGGATCACCAAGGTCCGCATATAAAGCTAAAGTGATAGGTGCAACGAAGGGACTCGAAATCAAAGTTAATCCAAGCATTCTGTCGTTCTCATCTCTCGGGCAGAAGCTATCCTTTCAGGTCACAGTAAAAGGGTCAATTCATCACAAATCCCGTGTCTCTGCTTCTCTGGTGTGGGATGATGGTACTTTCCAAGTCAGGAGCCCCATTGTTGTCTATGCTATCTATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 Peptidase_S8

Protein Analysis

708

Amino Acids

75.37

Weight (kDa)

8.48

Isoelectric Point (pI)

38.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000390)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18050 FvH4_7g18050
malus_domestica MD07G1206200.v1.1 MD07G1206400.v1.1 MD07G1206500.v1.1 MD07G1206700.v1.1 MD07G1207000.v1.1 MD07G1207100.v1.1 MD07G1207200.v1.1
prunus_persica Prupe.2G166200_v2.0.a1 Prupe.2G242000_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242400_v2.0.a1
pyrus_communis pycom07g19260 pycom07g19280 pycom07g19290
rosa_chinensis RchiOBHm_Chr1g0325901 RchiOBHm_Chr1g0325961 RchiOBHm_Chr1g0344281 RchiOBHm_Chr1g0344291 RchiOBHm_Chr1g0344301 RchiOBHm_Chr1g0368771 RchiOBHm_Chr1g0369141 RchiOBHm_Chr1g0369281 RchiOBHm_Chr1g0369291 RchiOBHm_Chr1g0369661 RchiOBHm_Chr1g0370161 RchiOBHm_Chr4g0396401
rosa_laevigata RLG00000009546 RLG00000027070 RLG00000027140 RLG00000027151 RLG00000027152 RLG00000027190 RLG00000027255 RLG00000028909 RLG00000030094 RLG00000030097
rosa_multiflora Rmu_co8196240.1_g000001 Rmu_co8379125.1_g000001 Rmu_co8402573.1_g000001 Rmu_co8479243.1_g000001 Rmu_sc0000019.1_g000019 Rmu_sc0001154.1_g000009 Rmu_sc0001482.1_g000014 Rmu_sc0004250.1_g000009 Rmu_sc0006696.1_g000002 Rmu_sc0006696.1_g000004 Rmu_sc0008679.1_g000018 Rmu_sc0009743.1_g000003 Rmu_sc0013657.1_g000023
rosa_roxburghii Rroxscaffold_4G00286760 Rroxscaffold_4G00287250 Rroxscaffold_4G00287470 Rroxscaffold_4G00287770 Rroxscaffold_4G00287930 Rroxscaffold_4G00309920 Rroxscaffold_4G00324120
rosa_rugosa Rorug01G0055900 Rorug01G0173100 Rorug01G0173200 Rorug01G0337700 Rorug01G0337800 Rorug01G0337800 Rorug01G0337800 Rorug01G0344900 Rorug01G0349400 Rorug01G0349400 Rorug01G0351700 Rorug01G0354500
rosa_samantha Rh1AG072300 Rh1AG189000 Rh1AG189100 Rh1AG351900 Rh1AG356500 Rh1AG359800 Rh1AG363200 Rh1BG059100 Rh1BG155800 Rh1BG306800 Rh1BG315600 Rh1BG319000 Rh1BG320300 Rh1BG326300 Rh1BG326400 Rh1CG071600 Rh1CG174600 Rh1CG174800 Rh1CG322400 Rh1CG330300 Rh1CG334200 Rh1CG339600
rosa_wichuraiana Rw1G005870 Rw1G005900 Rw1G015560 Rw1G031350 Rw1G031470 Rw1G031700 Rw1G031960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1124
Acc36I ACCTGC 1 cut(s) 1124
AccB7I CCANNNNNTGG 3 cut(s) 384, 1075, 1670
AccI GTMKAC 3 cut(s) 463, 702, 1034
AccII CGCG 1 cut(s) 692
AciI CCGC 6 cut(s) 536, 671, 692, 1569, 1584, 1908
AclWI GGATC 1 cut(s) 1903
AcoI YGGCCR 1 cut(s) 1639
AcsI RAATTY 3 cut(s) 792, 1622, 1709
AcuI CTGAAG 2 cut(s) 334, 1635
AdeI CACNNNGTG 1 cut(s) 1805
AfaI GTAC 4 cut(s) 626, 1288, 1735, 2077
AfiI CCNNNNNNNGG 8 cut(s) 384, 727, 891, 1075, 1216, 1257, 1657, 1670
AgsI TTSAA 8 cut(s) 68, 95, 136, 293, 914, 1442, 1816, 1873
AhdI GACNNNNNGTC 3 cut(s) 470, 487, 1306
AjnI CCWGG 3 cut(s) 826, 1054, 1669
Alw21I GWGCWC 3 cut(s) 445, 1723, 1801
Alw26I GTCTC 5 cut(s) 492, 993, 1480, 1554, 2053
Alw44I GTGCAC 1 cut(s) 1719
AlwI GGATC 1 cut(s) 1903
Ama87I CYCGRG 1 cut(s) 1988
AoxI GGCC 5 cut(s) 332, 367, 829, 1122, 1639
ApaLI GTGCAC 1 cut(s) 1719
ApoI RAATTY 3 cut(s) 792, 1622, 1709
ArsI GACNNNNNNTTYG 2 cut(s) 2031, 2063
AsiSI GCGATCGC 1 cut(s) 690
AspLEI GCGC 1 cut(s) 856
AspS9I GGNCC 7 cut(s) 368, 601, 824, 830, 1122, 1340, 1905
AsuC2I CCSGG 2 cut(s) 361, 1389
AsuHPI GGTGA 5 cut(s) 98, 491, 1090, 1529, 1890
AvaI CYCGRG 1 cut(s) 1988
AvaII GGWCC 4 cut(s) 601, 824, 1340, 1905
BaeGI GKGCMC 2 cut(s) 1723, 1764
BalI TGGCCA 1 cut(s) 1641
BanII GRGCYC 2 cut(s) 1663, 2096
BarI GAAGNNNNNNTAC 2 cut(s) 48, 80
BauI CACGAG 1 cut(s) 495
Bbv12I GWGCWC 3 cut(s) 445, 1723, 1801
BbvCI CCTCAGC 1 cut(s) 732
BccI CCATC 7 cut(s) 613, 638, 689, 848, 1097, 1330, 2066
BceAI ACGGC 1 cut(s) 549
BciT130I CCWGG 3 cut(s) 828, 1056, 1671
BcnI CCSGG 2 cut(s) 361, 1389
BcoDI GTCTC 5 cut(s) 492, 993, 1480, 1554, 2053
BfaI CTAG 2 cut(s) 213, 668
BfmI CTRYAG 1 cut(s) 1729
BfuAI ACCTGC 1 cut(s) 1124
BmcAI AGTACT 1 cut(s) 1288
Bme1390I CCNGG 5 cut(s) 361, 828, 1056, 1389, 1671
Bme18I GGWCC 4 cut(s) 601, 824, 1340, 1905
BmeRI GACNNNNNGTC 3 cut(s) 470, 487, 1306
BmeT110I CYCGRG 1 cut(s) 1988
BmgT120I GGNCC 7 cut(s) 368, 601, 824, 830, 1122, 1340, 1905
BmrFI CCNGG 5 cut(s) 361, 828, 1056, 1389, 1671
BmrI ACTGGG 1 cut(s) 1518
BmsI GCATC 6 cut(s) 346, 536, 673, 1469, 1675, 1866
BmuI ACTGGG 1 cut(s) 1518
BpmI CTGGAG 2 cut(s) 345, 1017
Bpu10I CCTNAGC 1 cut(s) 732
BpuEI CTTGAG 2 cut(s) 950, 1352
BpuMI CCSGG 2 cut(s) 361, 1389
BsaAI YACGTR 1 cut(s) 614
BsaI GGTCTC 1 cut(s) 1554
BsaJI CCNNGG 6 cut(s) 400, 721, 857, 906, 1210, 1901
Bsc4I CCNNNNNNNGG 8 cut(s) 384, 727, 891, 1075, 1216, 1257, 1657, 1670
Bse1I ACTGG 4 cut(s) 1117, 1349, 1513, 1701
Bse3DI GCAATG 1 cut(s) 41
BseBI CCWGG 3 cut(s) 828, 1056, 1671
BseDI CCNNGG 6 cut(s) 400, 721, 857, 906, 1210, 1901
BseGI GGATG 6 cut(s) 318, 407, 649, 700, 1322, 2074
BseLI CCNNNNNNNGG 8 cut(s) 384, 727, 891, 1075, 1216, 1257, 1657, 1670
BseMI GCAATG 1 cut(s) 41
BseMII CTCAG 6 cut(s) 185, 723, 1281, 1491, 1586, 1816
BseNI ACTGG 4 cut(s) 1117, 1349, 1513, 1701
BseRI GAGGAG 2 cut(s) 609, 1831
BseSI GKGCMC 2 cut(s) 1723, 1764
BseYI CCCAGC 1 cut(s) 812
BsgI GTGCAG 2 cut(s) 98, 1158
Bsh1236I CGCG 1 cut(s) 692
Bsh1285I CGRYCG 1 cut(s) 690
BshFI GGCC 5 cut(s) 334, 369, 831, 1124, 1641
BsiEI CGRYCG 1 cut(s) 690
BsiHKAI GWGCWC 3 cut(s) 445, 1723, 1801
BsiHKCI CYCGRG 1 cut(s) 1988
BsiSI CCGG 2 cut(s) 360, 1388
BslFI GGGAC 9 cut(s) 20, 475, 587, 764, 1120, 1294, 1495, 1584, 1956
BslI CCNNNNNNNGG 8 cut(s) 384, 727, 891, 1075, 1216, 1257, 1657, 1670
BsmAI GTCTC 5 cut(s) 492, 993, 1480, 1554, 2053
BsmBI CGTCTC 2 cut(s) 993, 1480
BsmFI GGGAC 9 cut(s) 20, 475, 587, 764, 1120, 1294, 1495, 1584, 1956
BsmI GAATGC 1 cut(s) 1968
BsnI GGCC 5 cut(s) 334, 369, 831, 1124, 1641
Bso31I GGTCTC 1 cut(s) 1554
BsoBI CYCGRG 1 cut(s) 1988
Bsp1286I GDGCHC 6 cut(s) 445, 1663, 1723, 1764, 1801, 2096
Bsp1407I TGTACA 1 cut(s) 624
Bsp143I GATC 5 cut(s) 315, 687, 889, 1603, 1895
Bsp19I CCATGG 1 cut(s) 857
BspACI CCGC 6 cut(s) 536, 671, 692, 1569, 1584, 1908
BspANI GGCC 5 cut(s) 334, 369, 831, 1124, 1641
BspCNI CTCAG 6 cut(s) 184, 724, 1282, 1490, 1587, 1815
BspFNI CGCG 1 cut(s) 692
BspHI TCATGA 1 cut(s) 265
BspMI ACCTGC 1 cut(s) 1124
BspPI GGATC 1 cut(s) 1903
BspTNI GGTCTC 1 cut(s) 1554
BsrDI GCAATG 1 cut(s) 41
BsrGI TGTACA 1 cut(s) 624
BsrI ACTGG 4 cut(s) 1117, 1349, 1513, 1701
BssECI CCNNGG 6 cut(s) 400, 721, 857, 906, 1210, 1901
BssMI GATC 5 cut(s) 315, 687, 889, 1603, 1895
BssSI CACGAG 1 cut(s) 495
BssT1I CCWWGG 5 cut(s) 400, 857, 906, 1210, 1901
Bst2BI CACGAG 1 cut(s) 495
Bst2UI CCWGG 3 cut(s) 828, 1056, 1671
Bst4CI ACNGT 5 cut(s) 289, 447, 824, 1308, 2017
Bst6I CTCTTC 3 cut(s) 54, 272, 1194
BstAPI GCANNNNNTGC 2 cut(s) 617, 851
BstAUI TGTACA 1 cut(s) 624
BstBAI YACGTR 1 cut(s) 614
BstC8I GCNNGC 5 cut(s) 346, 1021, 1200, 1495, 1639
BstDEI CTNAG 8 cut(s) 171, 547, 732, 1041, 1290, 1477, 1595, 1802
BstDSI CCRYGG 1 cut(s) 857
BstEII GGTNACC 1 cut(s) 920
BstENI CCTNNNNNAGG 2 cut(s) 725, 1255
BstF5I GGATG 6 cut(s) 318, 407, 649, 700, 1322, 2074
BstFNI CGCG 1 cut(s) 692
BstHHI GCGC 1 cut(s) 856
BstKTI GATC 5 cut(s) 318, 690, 892, 1606, 1898
BstMAI GTCTC 5 cut(s) 492, 993, 1480, 1554, 2053
BstMBI GATC 5 cut(s) 315, 687, 889, 1603, 1895
BstMCI CGRYCG 1 cut(s) 690
BstNI CCWGG 3 cut(s) 828, 1056, 1671
BstNSI RCATGY 4 cut(s) 64, 399, 1050, 1505
BstPI GGTNACC 1 cut(s) 920
BstSCI CCNGG 5 cut(s) 359, 826, 1054, 1387, 1669
BstSFI CTRYAG 1 cut(s) 1729
BstSLI GKGCMC 2 cut(s) 1723, 1764
BstUI CGCG 1 cut(s) 692
BsuRI GGCC 5 cut(s) 334, 369, 831, 1124, 1641
BtgI CCRYGG 1 cut(s) 857
BtgZI GCGATG 2 cut(s) 826, 1116
BtsCI GGATG 6 cut(s) 318, 407, 649, 700, 1322, 2074
BtsI GCAGTG 3 cut(s) 522, 627, 804
BtsIMutI CAGTG 9 cut(s) 285, 358, 522, 627, 804, 1304, 1506, 1810, 1867
BveI ACCTGC 1 cut(s) 1124
Cac8I GCNNGC 5 cut(s) 346, 1021, 1200, 1495, 1639
CciI TCATGA 1 cut(s) 265
CfoI GCGC 1 cut(s) 856
Cfr13I GGNCC 7 cut(s) 368, 601, 824, 830, 1122, 1340, 1905
CseI GACGC 1 cut(s) 1010
Csp6I GTAC 4 cut(s) 625, 1287, 1734, 2076
CspCI CAANNNNNGTGG 2 cut(s) 1873, 1908
CviQI GTAC 4 cut(s) 625, 1287, 1734, 2076
DdeI CTNAG 8 cut(s) 171, 547, 732, 1041, 1290, 1477, 1595, 1802
DpnI GATC 5 cut(s) 317, 689, 891, 1605, 1897
DpnII GATC 5 cut(s) 315, 687, 889, 1603, 1895
DraI TTTAAA 1 cut(s) 1282
DraIII CACNNNGTG 1 cut(s) 1805
DriI GACNNNNNGTC 3 cut(s) 470, 487, 1306
EaeI YGGCCR 1 cut(s) 1639
Eam1104I CTCTTC 3 cut(s) 54, 272, 1194
Eam1105I GACNNNNNGTC 3 cut(s) 470, 487, 1306
EarI CTCTTC 3 cut(s) 54, 272, 1194
Eco130I CCWWGG 5 cut(s) 400, 857, 906, 1210, 1901
Eco24I GRGCYC 2 cut(s) 1663, 2096
Eco31I GGTCTC 1 cut(s) 1554
Eco32I GATATC 1 cut(s) 301
Eco47I GGWCC 4 cut(s) 601, 824, 1340, 1905
Eco57I CTGAAG 2 cut(s) 334, 1635
Eco88I CYCGRG 1 cut(s) 1988
Eco91I GGTNACC 1 cut(s) 920
EcoNI CCTNNNNNAGG 2 cut(s) 725, 1255
EcoO109I RGGNCCY 4 cut(s) 601, 830, 1122, 1340
EcoO65I GGTNACC 1 cut(s) 920
EcoRI GAATTC 1 cut(s) 792
EcoRII CCWGG 3 cut(s) 826, 1054, 1669
EcoRV GATATC 1 cut(s) 301
EcoT14I CCWWGG 5 cut(s) 400, 857, 906, 1210, 1901
EcoT38I GRGCYC 2 cut(s) 1663, 2096
ErhI CCWWGG 5 cut(s) 400, 857, 906, 1210, 1901
Esp3I CGTCTC 2 cut(s) 993, 1480
FalI AAGNNNNNCTT 4 cut(s) 116, 148, 1988, 2020
FaqI GGGAC 9 cut(s) 20, 475, 587, 764, 1120, 1294, 1495, 1584, 1956
FauNDI CATATG 2 cut(s) 1315, 1630
FblI GTMKAC 3 cut(s) 463, 702, 1034
FokI GGATG 6 cut(s) 325, 394, 656, 707, 1309, 2081
FriOI GRGCYC 2 cut(s) 1663, 2096
FspBI CTAG 2 cut(s) 213, 668
GlaI GCGC 1 cut(s) 855
GsaI CCCAGC 1 cut(s) 816
GsuI CTGGAG 2 cut(s) 345, 1017
HaeIII GGCC 5 cut(s) 334, 369, 831, 1124, 1641
HapII CCGG 2 cut(s) 360, 1388
HgaI GACGC 1 cut(s) 1010
HhaI GCGC 1 cut(s) 856
Hin6I GCGC 1 cut(s) 854
HinP1I GCGC 1 cut(s) 854
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HindIII AAGCTT 1 cut(s) 130
HinfI GANTC 7 cut(s) 320, 338, 500, 752, 1031, 1597, 1944
HpaII CCGG 2 cut(s) 360, 1388
HphI GGTGA 5 cut(s) 98, 491, 1090, 1529, 1890
Hpy166II GTNNAC 6 cut(s) 58, 464, 625, 703, 1035, 1721
Hpy188I TCNGA 4 cut(s) 174, 643, 725, 798
Hpy188III TCNNGA 5 cut(s) 266, 324, 893, 1601, 2089
Hpy8I GTNNAC 6 cut(s) 58, 464, 625, 703, 1035, 1721
Hpy99I CGWCG 2 cut(s) 824, 1031
HpyAV CCTTC 4 cut(s) 1075, 1336, 1833, 1933
HpyCH4III ACNGT 5 cut(s) 289, 447, 824, 1308, 2017
HpyCH4IV ACGT 5 cut(s) 72, 273, 613, 1061, 1524
HpyF3I CTNAG 8 cut(s) 171, 547, 732, 1041, 1290, 1477, 1595, 1802
HpySE526I ACGT 5 cut(s) 72, 273, 613, 1061, 1524
HspAI GCGC 1 cut(s) 854
KflI GGGWCCC 1 cut(s) 601
Kzo9I GATC 5 cut(s) 315, 687, 889, 1603, 1895
LmnI GCTCC 9 cut(s) 234, 440, 767, 1390, 1391, 1634, 1666, 1796, 2091
LweI GCATC 6 cut(s) 346, 536, 673, 1469, 1675, 1866
MaeI CTAG 2 cut(s) 213, 668
MaeII ACGT 5 cut(s) 72, 273, 613, 1061, 1524
MaeIII GTNAC 8 cut(s) 479, 653, 901, 920, 946, 1226, 1351, 2011
MalI GATC 5 cut(s) 317, 689, 891, 1605, 1897
MboI GATC 5 cut(s) 315, 687, 889, 1603, 1895
MboII GAAGA 4 cut(s) 41, 176, 289, 1181
MfeI CAATTG 3 cut(s) 914, 1419, 1543
MhlI GDGCHC 6 cut(s) 445, 1663, 1723, 1764, 1801, 2096
MlsI TGGCCA 1 cut(s) 1641
MluNI TGGCCA 1 cut(s) 1641
MlyI GAGTC 6 cut(s) 314, 494, 746, 1040, 1606, 1938
MmeI TCCRAC 3 cut(s) 621, 1123, 1873
Mox20I TGGCCA 1 cut(s) 1641
MscI TGGCCA 1 cut(s) 1641
MseI TTAA 4 cut(s) 782, 1281, 1608, 1959
Msp20I TGGCCA 1 cut(s) 1641
MspI CCGG 2 cut(s) 360, 1388
MspR9I CCNGG 5 cut(s) 361, 828, 1056, 1389, 1671
MunI CAATTG 3 cut(s) 914, 1419, 1543
Mva1269I GAATGC 1 cut(s) 1968
MvaI CCWGG 3 cut(s) 828, 1056, 1671
MvnI CGCG 1 cut(s) 692
NciI CCSGG 2 cut(s) 361, 1389
NcoI CCATGG 1 cut(s) 857
NdeI CATATG 2 cut(s) 1315, 1630
NdeII GATC 5 cut(s) 315, 687, 889, 1603, 1895
NmuCI GTSAC 4 cut(s) 479, 653, 1351, 2011
NspI RCATGY 4 cut(s) 64, 399, 1050, 1505
PagI TCATGA 1 cut(s) 265
PaqCI CACCTGC 1 cut(s) 1124
PctI GAATGC 1 cut(s) 1968
PfeI GAWTC 1 cut(s) 338
PflMI CCANNNNNTGG 3 cut(s) 384, 1075, 1670
PfoI TCCNGGA 1 cut(s) 1387
Ple19I CGATCG 1 cut(s) 690
PleI GAGTC 6 cut(s) 314, 494, 746, 1039, 1605, 1938
PpsI GAGTC 6 cut(s) 314, 494, 746, 1039, 1605, 1938
Ppu21I YACGTR 1 cut(s) 614
PpuMI RGGWCCY 2 cut(s) 601, 1340
Psp5II RGGWCCY 2 cut(s) 601, 1340
Psp6I CCWGG 3 cut(s) 826, 1054, 1669
PspEI GGTNACC 1 cut(s) 920
PspFI CCCAGC 1 cut(s) 812
PspGI CCWGG 3 cut(s) 826, 1054, 1669
PspPI GGNCC 7 cut(s) 368, 601, 824, 830, 1122, 1340, 1905
PspPPI RGGWCCY 2 cut(s) 601, 1340
PsrI GAACNNNNNNTAC 2 cut(s) 93, 125
PvuI CGATCG 1 cut(s) 690
RgaI GCGATCGC 1 cut(s) 690
RsaI GTAC 4 cut(s) 626, 1288, 1735, 2077
RsaNI GTAC 4 cut(s) 625, 1287, 1734, 2076
SalI GTCGAC 1 cut(s) 701
SaqAI TTAA 4 cut(s) 782, 1281, 1608, 1959
Sau3AI GATC 5 cut(s) 315, 687, 889, 1603, 1895
Sau96I GGNCC 7 cut(s) 368, 601, 824, 830, 1122, 1340, 1905
ScaI AGTACT 1 cut(s) 1288
SchI GAGTC 6 cut(s) 314, 494, 746, 1040, 1606, 1938
ScrFI CCNGG 5 cut(s) 361, 828, 1056, 1389, 1671
SduI GDGCHC 6 cut(s) 445, 1663, 1723, 1764, 1801, 2096
SfaAI GCGATCGC 1 cut(s) 690
SfaNI GCATC 6 cut(s) 346, 536, 673, 1469, 1675, 1866
SfcI CTRYAG 1 cut(s) 1729
SgfI GCGATCGC 1 cut(s) 690
SinI GGWCC 4 cut(s) 601, 824, 1340, 1905
SmlI CTYRAG 2 cut(s) 965, 1367
SmoI CTYRAG 2 cut(s) 965, 1367
SsiI CCGC 6 cut(s) 536, 671, 692, 1569, 1584, 1908
SspI AATATT 1 cut(s) 91
SspMI CTAG 2 cut(s) 213, 668
StyD4I CCNGG 5 cut(s) 359, 826, 1054, 1387, 1669
StyI CCWWGG 5 cut(s) 400, 857, 906, 1210, 1901
TaaI ACNGT 5 cut(s) 289, 447, 824, 1308, 2017
TaiI ACGT 5 cut(s) 75, 276, 616, 1064, 1527
TaqI TCGA 5 cut(s) 21, 318, 503, 702, 1947
TatI WGTACW 2 cut(s) 624, 1286
TauI GCSGC 2 cut(s) 539, 674
TfiI GAWTC 1 cut(s) 338
Tru1I TTAA 4 cut(s) 782, 1281, 1608, 1959
Tru9I TTAA 4 cut(s) 782, 1281, 1608, 1959
TscAI CASTG 9 cut(s) 292, 358, 529, 627, 811, 1311, 1513, 1810, 1867
TseFI GTSAC 4 cut(s) 479, 653, 1351, 2011
Tsp45I GTSAC 4 cut(s) 479, 653, 1351, 2011
TspDTI ATGAA 5 cut(s) 41, 244, 254, 282, 2021
TspRI CASTG 9 cut(s) 292, 358, 529, 627, 811, 1311, 1513, 1810, 1867
Van91I CCANNNNNTGG 3 cut(s) 384, 1075, 1670
VneI GTGCAC 1 cut(s) 1719
VpaK11BI GGWCC 4 cut(s) 601, 824, 1340, 1905
XagI CCTNNNNNAGG 2 cut(s) 725, 1255
XapI RAATTY 3 cut(s) 792, 1622, 1709
XceI RCATGY 4 cut(s) 64, 399, 1050, 1505
XcmI CCANNNNNNNNNTGG 2 cut(s) 381, 913
XmiI GTMKAC 3 cut(s) 463, 702, 1034
XspI CTAG 2 cut(s) 213, 668
ZrmI AGTACT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.