Rmu_sc0001154.1_g000009

cucumisin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001154.1
OG0000390
Physical Location & Seq
Forward (+)
73552 .. 77857
4306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001154.1_g000009.1.cds

Sequence Viewer

Length: 1977 bp
atgggtgacaagccaaagaacgggcccatattacctgatcttgatgtgaatatgctacaagacgtagttgacagcagcaacattgatattgcagatctgcttcttcacagctacaagagaagttttaatggatttgctgcaatgctcacagagcaagaagcacaaaaaatgattggtgtgatggacagtggaatttggccagagtcaaacagctttagtgatgttggttttggtcctccacccaagaaatggaaaggcaaatgtcaaggccatggaaatcttacttgtaacaataaaatcatcggagcacagtattaccgtgcttctcgatccttcaaagaagatgttgagtctccaagagactcaagcggtcatggaactcacaccgcatcaacagcagctgggaacacagtgagtaaggcaagcctaaatggtttagggctgggaacagcaagaggaggggtaccatcagcacgtattgctgtgtacaaaatatgttggggcagcagcatcagttgtgatgatgctgacattctagcggcattcgatgatgccattgctgacggtgttgacattctctctatttccgttggaggccttattccatctgattattttaatgatccatttgcaattgggtcatttcatgctaccagaaatgggatattagtttccatggccgctggtaacgaaggtccgggagcaaaaactgtgacaaacttcgcaccatggcaactttctgtggctgctaccaccataaaccgccagttcatcaccaaggttcaattgggtaatggtaagctctatgagggactcataccaaacatatatgacctccggggtgaattctatcctttaatttatggtggagatgcacccaataaaaaagcaggtgttgatgggactatctccaggttttgtgtaagagatgccttagaagaagatttgattaaaggtaaaattgtgctttgtgatggccctatcgacggggctggggttggggccatattgggtggtgcagctggaattgttctgacaggaaaaaaagttgctgatgaagcgcttggcccttatctcgtgcctgcatcttacgtcggattggaagaaaacagcgacatttacaaatacataaactcaacaaggaacgcaactgcaactatttggaaaagtgaagagattagtgatgtattggctccatatgtgccctcctactcatcgaggggcccaaatccgatcaatcccaacattctcaagccagatttagcggctccaggaacttacattctggcagcatatcccccaagtggtggtggcagtaaagctagatactatctagaaactgggacatcaatggcatgtccccatgctacagccgtagctgcatatgtcaaatcatttcaccctaaatggtcaccggctgctatccaatcggcacttatcactactgctaaacctatgagtgccaaaactagctctgacgctgaatttgcatacggagctggcctaataaacccttctaaggtgccatatcctggtttggtgtacgatcttgatgaacaagactacatagattttttgtgttcacaaggatacagtggtaaactattgcaaagcataaccagggacaaggctagttgctcatcaaaatctattaatggaacaactaatgacatgaactatccttcttttgcactttccatcaaggatacgaaatttgtcaatggggtcttccataggactgtcactaatgttggatcgtcaaaatccacatatagagttaaagtggtggctccattgggactcaaaatcaatgtgaatccaagtgtgctatcgttcacaactctcgggcaaaagaaatcttttgttgtcactataaatgggccgattgagaaatcaaatctagtctctgcgtctttggtgtgggatgatggtgctttccaagtcaggagccccatcgttgtctatgttgttgtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 Peptidase_S8

Protein Analysis

658

Amino Acids

69.75

Weight (kDa)

6.72

Isoelectric Point (pI)

31.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000390)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18050 FvH4_7g18050
malus_domestica MD07G1206200.v1.1 MD07G1206400.v1.1 MD07G1206500.v1.1 MD07G1206700.v1.1 MD07G1207000.v1.1 MD07G1207100.v1.1 MD07G1207200.v1.1
prunus_persica Prupe.2G166200_v2.0.a1 Prupe.2G242000_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242400_v2.0.a1
pyrus_communis pycom07g19260 pycom07g19280 pycom07g19290
rosa_chinensis RchiOBHm_Chr1g0325901 RchiOBHm_Chr1g0325961 RchiOBHm_Chr1g0344281 RchiOBHm_Chr1g0344291 RchiOBHm_Chr1g0344301 RchiOBHm_Chr1g0368771 RchiOBHm_Chr1g0369141 RchiOBHm_Chr1g0369281 RchiOBHm_Chr1g0369291 RchiOBHm_Chr1g0369661 RchiOBHm_Chr1g0370161 RchiOBHm_Chr4g0396401
rosa_laevigata RLG00000009546 RLG00000027070 RLG00000027140 RLG00000027151 RLG00000027152 RLG00000027190 RLG00000027255 RLG00000028909 RLG00000030094 RLG00000030097
rosa_multiflora Rmu_co8196240.1_g000001 Rmu_co8379125.1_g000001 Rmu_co8402573.1_g000001 Rmu_co8479243.1_g000001 Rmu_sc0000019.1_g000019 Rmu_sc0001154.1_g000009 Rmu_sc0001482.1_g000014 Rmu_sc0004250.1_g000009 Rmu_sc0006696.1_g000002 Rmu_sc0006696.1_g000004 Rmu_sc0008679.1_g000018 Rmu_sc0009743.1_g000003 Rmu_sc0013657.1_g000023
rosa_roxburghii Rroxscaffold_4G00286760 Rroxscaffold_4G00287250 Rroxscaffold_4G00287470 Rroxscaffold_4G00287770 Rroxscaffold_4G00287930 Rroxscaffold_4G00309920 Rroxscaffold_4G00324120
rosa_rugosa Rorug01G0055900 Rorug01G0173100 Rorug01G0173200 Rorug01G0337700 Rorug01G0337800 Rorug01G0337800 Rorug01G0337800 Rorug01G0344900 Rorug01G0349400 Rorug01G0349400 Rorug01G0351700 Rorug01G0354500
rosa_samantha Rh1AG072300 Rh1AG189000 Rh1AG189100 Rh1AG351900 Rh1AG356500 Rh1AG359800 Rh1AG363200 Rh1BG059100 Rh1BG155800 Rh1BG306800 Rh1BG315600 Rh1BG319000 Rh1BG320300 Rh1BG326300 Rh1BG326400 Rh1CG071600 Rh1CG174600 Rh1CG174800 Rh1CG322400 Rh1CG330300 Rh1CG334200 Rh1CG339600
rosa_wichuraiana Rw1G005870 Rw1G005900 Rw1G015560 Rw1G031350 Rw1G031470 Rw1G031700 Rw1G031960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 881
Acc36I ACCTGC 1 cut(s) 881
Acc65I GGTACC 1 cut(s) 463
AccB1I GGYRCC 2 cut(s) 463, 1522
AccB7I CCANNNNNTGG 3 cut(s) 249, 1307, 1532
AciI CCGC 6 cut(s) 369, 387, 539, 681, 763, 1265
AclWI GGATC 3 cut(s) 324, 617, 1762
AcoI YGGCCR 2 cut(s) 197, 678
AcsI RAATTY 4 cut(s) 192, 845, 1484, 1712
AfaI GTAC 3 cut(s) 465, 488, 1544
AfeI AGCGCT 1 cut(s) 1062
AfiI CCNNNNNNNGG 8 cut(s) 20, 249, 660, 986, 1304, 1307, 1519, 1532
AgsI TTSAA 2 cut(s) 337, 785
AjnI CCWGG 4 cut(s) 911, 1270, 1531, 1619
AluBI AGCT 9 cut(s) 111, 213, 401, 802, 1022, 1322, 1379, 1473, 1499
AluI AGCT 9 cut(s) 111, 213, 401, 802, 1022, 1322, 1379, 1473, 1499
Alw21I GWGCWC 1 cut(s) 310
Alw26I GTCTC 3 cut(s) 354, 357, 1909
AlwI GGATC 3 cut(s) 324, 617, 1762
AlwNI CAGNNNCTG 1 cut(s) 401
Ama87I CYCGRG 1 cut(s) 1844
Aor51HI AGCGCT 1 cut(s) 1062
ApaI GGGCCC 2 cut(s) 27, 1226
ApoI RAATTY 4 cut(s) 192, 845, 1484, 1712
ArsI GACNNNNNNTTYG 2 cut(s) 1469, 1501
AseI ATTAAT 1 cut(s) 1653
Asp718I GGTACC 1 cut(s) 463
AspLEI GCGC 1 cut(s) 1063
AsuC2I CCSGG 2 cut(s) 699, 839
AsuHPI GGTGA 5 cut(s) 17, 766, 854, 1391, 1404
AvaI CYCGRG 1 cut(s) 1844
AvaII GGWCC 2 cut(s) 233, 695
BaeGI GKGCMC 3 cut(s) 27, 1206, 1226
BaeI ACNNNNGTAYC 2 cut(s) 1582, 1615
BalI TGGCCA 1 cut(s) 199
BanI GGYRCC 2 cut(s) 463, 1522
BanII GRGCYC 3 cut(s) 27, 1226, 1952
BauI CACGAG 1 cut(s) 1076
BbsI GAAGAC 1 cut(s) 1720
Bbv12I GWGCWC 1 cut(s) 310
BccI CCATC 8 cut(s) 175, 475, 613, 893, 968, 1706, 1922, 1961
BceAI ACGGC 1 cut(s) 1358
BciT130I CCWGG 4 cut(s) 913, 1272, 1533, 1621
BciVI GTATCC 2 cut(s) 1583, 1699
BcnI CCSGG 2 cut(s) 699, 839
BcoDI GTCTC 3 cut(s) 354, 357, 1909
BfaI CTAG 6 cut(s) 536, 1323, 1334, 1470, 1632, 1901
BfmI CTRYAG 1 cut(s) 1368
BfoI RGCGCY 1 cut(s) 1064
BfuAI ACCTGC 1 cut(s) 881
BfuI GTATCC 2 cut(s) 1583, 1699
BglII AGATCT 1 cut(s) 94
Bme1390I CCNGG 6 cut(s) 699, 839, 913, 1272, 1533, 1621
Bme18I GGWCC 2 cut(s) 233, 695
BmeT110I CYCGRG 1 cut(s) 1844
BmrFI CCNGG 6 cut(s) 699, 839, 913, 1272, 1533, 1621
BmrI ACTGGG 1 cut(s) 1350
BmsI GCATC 7 cut(s) 398, 514, 519, 541, 862, 919, 1094
BmuI ACTGGG 1 cut(s) 1350
BpiI GAAGAC 1 cut(s) 1720
BpmI CTGGAG 2 cut(s) 895, 1254
BpuEI CTTGAG 2 cut(s) 349, 1235
BpuMI CCSGG 2 cut(s) 699, 839
BsaAI YACGTR 1 cut(s) 476
BsaJI CCNNGG 6 cut(s) 271, 675, 728, 777, 838, 1620
Bsc4I CCNNNNNNNGG 8 cut(s) 20, 249, 660, 986, 1304, 1307, 1519, 1532
Bse118I RCCGGY 1 cut(s) 1414
Bse1I ACTGG 2 cut(s) 766, 1345
Bse3DI GCAATG 2 cut(s) 147, 555
BseBI CCWGG 4 cut(s) 913, 1272, 1533, 1621
BseDI CCNNGG 6 cut(s) 271, 675, 728, 777, 838, 1620
BseGI GGATG 1 cut(s) 1930
BseLI CCNNNNNNNGG 8 cut(s) 20, 249, 660, 986, 1304, 1307, 1519, 1532
BseMI GCAATG 2 cut(s) 147, 555
BseNI ACTGG 2 cut(s) 766, 1345
BseRI GAGGAG 1 cut(s) 471
BseSI GKGCMC 3 cut(s) 27, 1206, 1226
BseYI CCCAGC 3 cut(s) 401, 442, 992
BsgI GTGCAG 1 cut(s) 1038
BshNI GGYRCC 2 cut(s) 463, 1522
BsiHKAI GWGCWC 1 cut(s) 310
BsiHKCI CYCGRG 1 cut(s) 1844
BsiSI CCGG 3 cut(s) 698, 838, 1415
BslFI GGGAC 6 cut(s) 825, 916, 1344, 1357, 1637, 1812
BslI CCNNNNNNNGG 8 cut(s) 20, 249, 660, 986, 1304, 1307, 1519, 1532
BsmAI GTCTC 3 cut(s) 354, 357, 1909
BsmFI GGGAC 6 cut(s) 825, 916, 1344, 1357, 1637, 1812
BsmI GAATGC 1 cut(s) 542
BsoBI CYCGRG 1 cut(s) 1844
Bsp120I GGGCCC 2 cut(s) 23, 1222
Bsp1286I GDGCHC 5 cut(s) 27, 310, 1206, 1226, 1952
Bsp1407I TGTACA 1 cut(s) 486
Bsp143I GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
Bsp19I CCATGG 3 cut(s) 271, 675, 728
BspACI CCGC 6 cut(s) 369, 387, 539, 681, 763, 1265
BspMI ACCTGC 1 cut(s) 881
BspPI GGATC 3 cut(s) 324, 617, 1762
BspT107I GGYRCC 2 cut(s) 463, 1522
BsrDI GCAATG 2 cut(s) 147, 555
BsrFI RCCGGY 1 cut(s) 1414
BsrGI TGTACA 1 cut(s) 486
BsrI ACTGG 2 cut(s) 766, 1345
BssAI RCCGGY 1 cut(s) 1414
BssECI CCNNGG 6 cut(s) 271, 675, 728, 777, 838, 1620
BssMI GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
BssSI CACGAG 1 cut(s) 1076
BssT1I CCWWGG 4 cut(s) 271, 675, 728, 777
Bst2BI CACGAG 1 cut(s) 1076
Bst2UI CCWGG 4 cut(s) 913, 1272, 1533, 1621
Bst4CI ACNGT 8 cut(s) 188, 312, 320, 412, 566, 712, 1595, 1741
Bst6I CTCTTC 1 cut(s) 1167
BstAPI GCANNNNNTGC 1 cut(s) 479
BstAUI TGTACA 1 cut(s) 486
BstBAI YACGTR 1 cut(s) 476
BstC8I GCNNGC 3 cut(s) 424, 1083, 1501
BstDEI CTNAG 2 cut(s) 934, 1518
BstDSI CCRYGG 3 cut(s) 271, 675, 728
BstEII GGTNACC 1 cut(s) 1410
BstF5I GGATG 1 cut(s) 1930
BstH2I RGCGCY 1 cut(s) 1064
BstHHI GCGC 1 cut(s) 1063
BstKTI GATC 7 cut(s) 40, 97, 332, 625, 1236, 1549, 1757
BstMAI GTCTC 3 cut(s) 354, 357, 1909
BstMBI GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
BstMWI GCNNNNNNNGC 7 cut(s) 151, 395, 479, 1058, 1379, 1487, 1496
BstNI CCWGG 4 cut(s) 913, 1272, 1533, 1621
BstNSI RCATGY 1 cut(s) 1359
BstPI GGTNACC 1 cut(s) 1410
BstSCI CCNGG 6 cut(s) 697, 837, 911, 1270, 1531, 1619
BstSFI CTRYAG 1 cut(s) 1368
BstSLI GKGCMC 3 cut(s) 27, 1206, 1226
BstV2I GAAGAC 1 cut(s) 1720
BstX2I RGATCY 1 cut(s) 94
BstYI RGATCY 1 cut(s) 94
BsuI GTATCC 2 cut(s) 1583, 1699
BtgI CCRYGG 3 cut(s) 271, 675, 728
BtsCI GGATG 1 cut(s) 1930
BtsIMutI CAGTG 3 cut(s) 193, 417, 1600
BveI ACCTGC 1 cut(s) 881
Cac8I GCNNGC 3 cut(s) 424, 1083, 1501
CaiI CAGNNNCTG 1 cut(s) 401
CfoI GCGC 1 cut(s) 1063
Cfr10I RCCGGY 1 cut(s) 1414
CseI GACGC 2 cut(s) 1487, 1899
Csp6I GTAC 3 cut(s) 464, 487, 1543
CviAII CATG 8 cut(s) 272, 374, 647, 676, 729, 1356, 1364, 1672
CviQI GTAC 3 cut(s) 464, 487, 1543
DdeI CTNAG 2 cut(s) 934, 1518
DpnI GATC 7 cut(s) 39, 96, 331, 624, 1235, 1548, 1756
DpnII GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
EaeI YGGCCR 2 cut(s) 197, 678
Eam1104I CTCTTC 1 cut(s) 1167
EarI CTCTTC 1 cut(s) 1167
Eco130I CCWWGG 4 cut(s) 271, 675, 728, 777
Eco147I AGGCCT 1 cut(s) 597
Eco24I GRGCYC 3 cut(s) 27, 1226, 1952
Eco47I GGWCC 2 cut(s) 233, 695
Eco47III AGCGCT 1 cut(s) 1062
Eco88I CYCGRG 1 cut(s) 1844
Eco91I GGTNACC 1 cut(s) 1410
EcoO109I RGGNCCY 1 cut(s) 1222
EcoO65I GGTNACC 1 cut(s) 1410
EcoRI GAATTC 1 cut(s) 845
EcoRII CCWGG 4 cut(s) 911, 1270, 1531, 1619
EcoT14I CCWWGG 4 cut(s) 271, 675, 728, 777
EcoT38I GRGCYC 3 cut(s) 27, 1226, 1952
ErhI CCWWGG 4 cut(s) 271, 675, 728, 777
FaeI CATG 8 cut(s) 275, 377, 650, 679, 732, 1359, 1367, 1675
FaqI GGGAC 6 cut(s) 825, 916, 1344, 1357, 1637, 1812
FatI CATG 8 cut(s) 271, 373, 646, 675, 728, 1355, 1363, 1671
FauNDI CATATG 2 cut(s) 1198, 1384
FokI GGATG 1 cut(s) 1937
FriOI GRGCYC 3 cut(s) 27, 1226, 1952
FspBI CTAG 6 cut(s) 536, 1323, 1334, 1470, 1632, 1901
GlaI GCGC 1 cut(s) 1062
GsaI CCCAGC 3 cut(s) 405, 446, 996
GsuI CTGGAG 2 cut(s) 895, 1254
HaeII RGCGCY 1 cut(s) 1064
HapII CCGG 3 cut(s) 698, 838, 1415
HgaI GACGC 2 cut(s) 1487, 1899
HhaI GCGC 1 cut(s) 1063
Hin1II CATG 8 cut(s) 275, 377, 650, 679, 732, 1359, 1367, 1675
Hin6I GCGC 1 cut(s) 1061
HinP1I GCGC 1 cut(s) 1061
HincII GTYRAC 2 cut(s) 70, 571
HindII GTYRAC 2 cut(s) 70, 571
HinfI GANTC 6 cut(s) 203, 350, 362, 813, 1800, 1816
HpaII CCGG 3 cut(s) 698, 838, 1415
HphI GGTGA 5 cut(s) 17, 766, 854, 1391, 1404
Hpy166II GTNNAC 7 cut(s) 70, 487, 571, 1543, 1583, 1601, 1836
Hpy188I TCNGA 6 cut(s) 305, 610, 1035, 1097, 1233, 1477
Hpy188III TCNNGA 5 cut(s) 41, 327, 1334, 1550, 1945
Hpy8I GTNNAC 7 cut(s) 70, 487, 571, 1543, 1583, 1601, 1836
Hpy99I CGWCG 2 cut(s) 989, 1097
HpyAV CCTTC 4 cut(s) 343, 686, 1524, 1692
HpyCH4III ACNGT 8 cut(s) 188, 312, 320, 412, 566, 712, 1595, 1741
HpyCH4IV ACGT 3 cut(s) 63, 475, 1092
HpyF10VI GCNNNNNNNGC 7 cut(s) 151, 395, 479, 1058, 1379, 1487, 1496
HpyF3I CTNAG 2 cut(s) 934, 1518
HpySE526I ACGT 3 cut(s) 63, 475, 1092
Hsp92II CATG 8 cut(s) 275, 377, 650, 679, 732, 1359, 1367, 1675
HspAI GCGC 1 cut(s) 1061
KpnI GGTACC 1 cut(s) 467
Kzo9I GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
LmnI GCTCC 7 cut(s) 305, 701, 1198, 1273, 1496, 1795, 1947
LweI GCATC 7 cut(s) 398, 514, 519, 541, 862, 919, 1094
MaeI CTAG 6 cut(s) 536, 1323, 1334, 1470, 1632, 1901
MaeII ACGT 3 cut(s) 63, 475, 1092
MaeIII GTNAC 7 cut(s) 5, 287, 686, 712, 1410, 1741, 1867
MalI GATC 7 cut(s) 39, 96, 331, 624, 1235, 1548, 1756
MboI GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
MboII GAAGA 7 cut(s) 95, 353, 950, 953, 1115, 1184, 1720
MfeI CAATTG 2 cut(s) 633, 785
MflI RGATCY 1 cut(s) 94
MhlI GDGCHC 5 cut(s) 27, 310, 1206, 1226, 1952
MlsI TGGCCA 1 cut(s) 199
MluCI AATT 9 cut(s) 192, 633, 785, 845, 858, 960, 1026, 1484, 1712
MluNI TGGCCA 1 cut(s) 199
MlyI GAGTC 5 cut(s) 212, 356, 359, 807, 1794
MmeI TCCRAC 3 cut(s) 571, 1075, 1732
MnlI CCTC 8 cut(s) 246, 449, 452, 587, 802, 845, 1212, 1216
Mox20I TGGCCA 1 cut(s) 199
MscI TGGCCA 1 cut(s) 199
MseI TTAA 7 cut(s) 126, 618, 857, 951, 1653, 1779, 1975
Msp20I TGGCCA 1 cut(s) 199
MspA1I CMGCKG 3 cut(s) 401, 683, 1022
MspI CCGG 3 cut(s) 698, 838, 1415
MspR9I CCNGG 6 cut(s) 699, 839, 913, 1272, 1533, 1621
MunI CAATTG 2 cut(s) 633, 785
Mva1269I GAATGC 1 cut(s) 542
MvaI CCWGG 4 cut(s) 913, 1272, 1533, 1621
MwoI GCNNNNNNNGC 7 cut(s) 151, 395, 479, 1058, 1379, 1487, 1496
NciI CCSGG 2 cut(s) 699, 839
NcoI CCATGG 3 cut(s) 271, 675, 728
NdeI CATATG 2 cut(s) 1198, 1384
NdeII GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
NlaIII CATG 8 cut(s) 275, 377, 650, 679, 732, 1359, 1367, 1675
NmuCI GTSAC 5 cut(s) 5, 712, 1410, 1741, 1867
NspI RCATGY 1 cut(s) 1359
PaqCI CACCTGC 1 cut(s) 881
PceI AGGCCT 1 cut(s) 597
PctI GAATGC 1 cut(s) 542
PfeI GAWTC 1 cut(s) 1816
PflMI CCANNNNNTGG 3 cut(s) 249, 1307, 1532
PfoI TCCNGGA 2 cut(s) 697, 1270
PleI GAGTC 5 cut(s) 211, 356, 358, 807, 1794
PpsI GAGTC 5 cut(s) 211, 356, 358, 807, 1794
Ppu21I YACGTR 1 cut(s) 476
PshBI ATTAAT 1 cut(s) 1653
Psp6I CCWGG 4 cut(s) 911, 1270, 1531, 1619
PspEI GGTNACC 1 cut(s) 1410
PspFI CCCAGC 3 cut(s) 401, 442, 992
PspGI CCWGG 4 cut(s) 911, 1270, 1531, 1619
PspOMI GGGCCC 2 cut(s) 23, 1222
PstNI CAGNNNCTG 1 cut(s) 401
PsuI RGATCY 1 cut(s) 94
PvuII CAGCTG 2 cut(s) 401, 1022
RsaI GTAC 3 cut(s) 465, 488, 1544
RsaNI GTAC 3 cut(s) 464, 487, 1543
SaqAI TTAA 7 cut(s) 126, 618, 857, 951, 1653, 1779, 1975
Sau3AI GATC 7 cut(s) 37, 94, 329, 622, 1233, 1546, 1754
SchI GAGTC 5 cut(s) 212, 356, 359, 807, 1794
ScrFI CCNGG 6 cut(s) 699, 839, 913, 1272, 1533, 1621
SduI GDGCHC 5 cut(s) 27, 310, 1206, 1226, 1952
SfaNI GCATC 7 cut(s) 398, 514, 519, 541, 862, 919, 1094
SfcI CTRYAG 1 cut(s) 1368
SinI GGWCC 2 cut(s) 233, 695
SmlI CTYRAG 2 cut(s) 364, 1250
SmoI CTYRAG 2 cut(s) 364, 1250
Sse9I AATT 9 cut(s) 192, 633, 785, 845, 858, 960, 1026, 1484, 1712
SseBI AGGCCT 1 cut(s) 597
SsiI CCGC 6 cut(s) 369, 387, 539, 681, 763, 1265
SspMI CTAG 6 cut(s) 536, 1323, 1334, 1470, 1632, 1901
StuI AGGCCT 1 cut(s) 597
StyD4I CCNGG 6 cut(s) 697, 837, 911, 1270, 1531, 1619
StyI CCWWGG 4 cut(s) 271, 675, 728, 777
TaaI ACNGT 8 cut(s) 188, 312, 320, 412, 566, 712, 1595, 1741
TaiI ACGT 3 cut(s) 66, 478, 1095
TaqI TCGA 4 cut(s) 328, 546, 984, 1217
TasI AATT 9 cut(s) 192, 633, 785, 845, 858, 960, 1026, 1484, 1712
TatI WGTACW 1 cut(s) 486
TauI GCSGC 3 cut(s) 542, 683, 1268
TfiI GAWTC 1 cut(s) 1816
Tru1I TTAA 7 cut(s) 126, 618, 857, 951, 1653, 1779, 1975
Tru9I TTAA 7 cut(s) 126, 618, 857, 951, 1653, 1779, 1975
TscAI CASTG 3 cut(s) 193, 417, 1600
TseFI GTSAC 5 cut(s) 5, 712, 1410, 1741, 1867
Tsp45I GTSAC 5 cut(s) 5, 712, 1410, 1741, 1867
TspDTI ATGAA 5 cut(s) 635, 760, 1071, 1569, 1688
TspGWI ACGGA 2 cut(s) 577, 1509
TspRI CASTG 3 cut(s) 193, 417, 1600
Van91I CCANNNNNTGG 3 cut(s) 249, 1307, 1532
VpaK11BI GGWCC 2 cut(s) 233, 695
VspI ATTAAT 1 cut(s) 1653
XapI RAATTY 4 cut(s) 192, 845, 1484, 1712
XbaI TCTAGA 1 cut(s) 1333
XceI RCATGY 1 cut(s) 1359
XcmI CCANNNNNNNNNTGG 2 cut(s) 246, 784
XspI CTAG 6 cut(s) 536, 1323, 1334, 1470, 1632, 1901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.