RLG00000027152

cucumisin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000390
Physical Location & Seq
Forward (+)
9053058 .. 9056401
3344 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027152

Sequence Viewer

Length: 1323 bp
ATGGATTTATTTATTGAGATCTCAACAGTAAAAATCATCGGAGCACAGTATTATCTTGCTTCTCGATCCTTCGAAGAAGATGTTGAGTCTCCAAGAGACTCAAGCGGTCATGGAACTCACACCACATCAACAGCACCTGGGAACACAGTGAGCAAGGCAACCCTAAATGGTTTAGGGTTGGGAACAACAAGAGGAGGGGTGTCATCAGCATGTATTGCTGTGTACAAAGTATGTTGGGGTACCGACATCAGTAGCGACGATGTTGACATTCTAGCAGCATTCGATAATGCCATTGCTGACAGTGTCGACATTCTCTCTATTTCCTTCGGAAGCACTATTCCATTTAATTATTTGAATGATCCATTTGCAATTGGATCATTTCACGCTACCAGAAATGGGATATTAGTTTCCATGGCCGCTGGTAATGAAGGTCTGGGAGCAAAAACAGTGACAAACTTTGCACCATGGCAACTTTCTGTGGCTGCTACCACCATAAACCGCCAGGACTTTTACCAAACATATATGACTGAATTCTATCCTTTAATTTATGGTGGAGACACACCTAATACAAAAGCAGGCGCTAACGGGACTATCTCCAGGTTTTGTGTCAAAGATAGCTTAGAAGAAGATTTGATCAGAGGTAAAATTGTGCTTTGTGATGGCCCTGATGATGAGGCTGGGGTTGGGGCCATATTGGGTGGTGTAGCCAGAATTGTTCTGACGGGAAAAAAAGTCGACGATGAAGTGCTTAGCCCTTATCCCGTGCCTGCATCTCAAGTCAGATTGGAAGAAAACAATGACATTTACAAATACATAAACTTAACAAGGAACGCAACTGCAACTATTTGGAAAAGTGAAGAGATTAATGATGTATTGGCTCCATACGTGCCCTCCTACTCATCGAGGGGCCCAAATCTGATCAATCCCAACATTCTCAAGCCAGATTTAGCGGCTCCAGGAACGTACATTTTGGCAGCATATCCCCCAAGTGAGGGTAGCAGTAGAGCTAGATACTATATAGAAACCGGGTCATCAATGGCATGCCCCCATTCTACGGCCGTAGCTACATACGTCAAATCATTTCACCTTAAATGGTCAGCGGCTGCTATCCAATCTGCTCTCATCACTACTGCTAAACTCATGAGTGCCAAAATTAGTCCTGACATTGAATTTGCATACGGAGCTGGCCTAATAAACCCTTCTAGGGCGCCATATCCTGGTTTGGTGTACAATCTTGATGAACAAGACTACATAAATTTTTTGTGTTCACAAGGATACAGTGGTAAACTATTGCAAGCCATAACCAGGGACAAGACTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 Peptidase_S8

Protein Analysis

441

Amino Acids

47.14

Weight (kDa)

4.95

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S8 PF00082 25 - 396 2.7e-30 Subtilase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000390)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18050 FvH4_7g18050
malus_domestica MD07G1206200.v1.1 MD07G1206400.v1.1 MD07G1206500.v1.1 MD07G1206700.v1.1 MD07G1207000.v1.1 MD07G1207100.v1.1 MD07G1207200.v1.1
prunus_persica Prupe.2G166200_v2.0.a1 Prupe.2G242000_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242400_v2.0.a1
pyrus_communis pycom07g19260 pycom07g19280 pycom07g19290
rosa_chinensis RchiOBHm_Chr1g0325901 RchiOBHm_Chr1g0325961 RchiOBHm_Chr1g0344281 RchiOBHm_Chr1g0344291 RchiOBHm_Chr1g0344301 RchiOBHm_Chr1g0368771 RchiOBHm_Chr1g0369141 RchiOBHm_Chr1g0369281 RchiOBHm_Chr1g0369291 RchiOBHm_Chr1g0369661 RchiOBHm_Chr1g0370161 RchiOBHm_Chr4g0396401
rosa_laevigata RLG00000009546 RLG00000027070 RLG00000027140 RLG00000027151 RLG00000027152 RLG00000027190 RLG00000027255 RLG00000028909 RLG00000030094 RLG00000030097
rosa_multiflora Rmu_co8196240.1_g000001 Rmu_co8379125.1_g000001 Rmu_co8402573.1_g000001 Rmu_co8479243.1_g000001 Rmu_sc0000019.1_g000019 Rmu_sc0001154.1_g000009 Rmu_sc0001482.1_g000014 Rmu_sc0004250.1_g000009 Rmu_sc0006696.1_g000002 Rmu_sc0006696.1_g000004 Rmu_sc0008679.1_g000018 Rmu_sc0009743.1_g000003 Rmu_sc0013657.1_g000023
rosa_roxburghii Rroxscaffold_4G00286760 Rroxscaffold_4G00287250 Rroxscaffold_4G00287470 Rroxscaffold_4G00287770 Rroxscaffold_4G00287930 Rroxscaffold_4G00309920 Rroxscaffold_4G00324120
rosa_rugosa Rorug01G0055900 Rorug01G0173100 Rorug01G0173200 Rorug01G0337700 Rorug01G0337800 Rorug01G0337800 Rorug01G0337800 Rorug01G0344900 Rorug01G0349400 Rorug01G0349400 Rorug01G0351700 Rorug01G0354500
rosa_samantha Rh1AG072300 Rh1AG189000 Rh1AG189100 Rh1AG351900 Rh1AG356500 Rh1AG359800 Rh1AG363200 Rh1BG059100 Rh1BG155800 Rh1BG306800 Rh1BG315600 Rh1BG319000 Rh1BG320300 Rh1BG326300 Rh1BG326400 Rh1CG071600 Rh1CG174600 Rh1CG174800 Rh1CG322400 Rh1CG330300 Rh1CG334200 Rh1CG339600
rosa_wichuraiana Rw1G005870 Rw1G005900 Rw1G015560 Rw1G031350 Rw1G031470 Rw1G031700 Rw1G031960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 239
AccB1I GGYRCC 2 cut(s) 239, 1207
AccB7I CCANNNNNTGG 1 cut(s) 1217
AccI GTMKAC 2 cut(s) 306, 735
AciI CCGC 5 cut(s) 105, 417, 499, 950, 1100
AclWI GGATC 3 cut(s) 60, 353, 382
AcoI YGGCCR 2 cut(s) 414, 1056
AcsI RAATTY 3 cut(s) 530, 1169, 1255
AcyI GRCGYC 1 cut(s) 1208
AfaI GTAC 4 cut(s) 224, 241, 965, 1229
AfiI CCNNNNNNNGG 7 cut(s) 396, 991, 992, 1054, 1204, 1217, 1305
AgsI TTSAA 2 cut(s) 355, 1169
AjnI CCWGG 6 cut(s) 136, 501, 596, 955, 1216, 1304
AluBI AGCT 5 cut(s) 618, 1007, 1064, 1184, 1320
AluI AGCT 5 cut(s) 618, 1007, 1064, 1184, 1320
Alw21I GWGCWC 1 cut(s) 46
Alw26I GTCTC 3 cut(s) 90, 93, 549
AlwI GGATC 3 cut(s) 60, 353, 382
AlwNI CAGNNNCTG 2 cut(s) 137, 1103
AoxI GGCC 6 cut(s) 414, 661, 687, 907, 1056, 1186
ApaI GGGCCC 1 cut(s) 911
ApeKI GCWGC 4 cut(s) 275, 482, 974, 1103
ApoI RAATTY 3 cut(s) 530, 1169, 1255
ArsI GACNNNNNNTTYG 2 cut(s) 1154, 1186
AseI ATTAAT 1 cut(s) 864
Asp718I GGTACC 1 cut(s) 239
AspLEI GCGC 2 cut(s) 581, 1210
AspS9I GGNCC 4 cut(s) 662, 687, 907, 908
AsuC2I CCSGG 1 cut(s) 1027
AsuHPI GGTGA 1 cut(s) 1076
AsuII TTCGAA 1 cut(s) 72
BaeGI GKGCMC 2 cut(s) 891, 911
BaeI ACNNNNGTAYC 2 cut(s) 1267, 1300
BanI GGYRCC 2 cut(s) 239, 1207
BanII GRGCYC 1 cut(s) 911
Bbv12I GWGCWC 1 cut(s) 46
BbvI GCAGC 4 cut(s) 287, 469, 986, 1090
BccI CCATC 1 cut(s) 653
BceAI ACGGC 2 cut(s) 1043, 1071
BciT130I CCWGG 6 cut(s) 138, 503, 598, 957, 1218, 1306
BciVI GTATCC 1 cut(s) 1268
BclI TGATCA 2 cut(s) 633, 918
BcnI CCSGG 1 cut(s) 1027
BcoDI GTCTC 3 cut(s) 90, 93, 549
BfaI CTAG 5 cut(s) 272, 1008, 1203, 1317, 1321
BfoI RGCGCY 2 cut(s) 582, 1211
BfuI GTATCC 1 cut(s) 1268
BglII AGATCT 1 cut(s) 18
BisI GCNGC 7 cut(s) 276, 417, 483, 951, 975, 1101, 1104
BlpI GCTNAGC 1 cut(s) 749
BlsI GCNGC 7 cut(s) 277, 418, 484, 952, 976, 1102, 1105
Bme1390I CCNGG 7 cut(s) 138, 503, 598, 957, 1027, 1218, 1306
BmgT120I GGNCC 4 cut(s) 662, 687, 907, 908
BmiI GGNNCC 7 cut(s) 241, 688, 879, 908, 909, 954, 1209
BmrFI CCNGG 7 cut(s) 138, 503, 598, 957, 1027, 1218, 1306
BmsI GCATC 1 cut(s) 779
BpmI CTGGAG 2 cut(s) 580, 939
Bpu1102I GCTNAGC 1 cut(s) 749
Bpu14I TTCGAA 1 cut(s) 72
BpuEI CTTGAG 3 cut(s) 85, 759, 920
BpuMI CCSGG 1 cut(s) 1027
BsaAI YACGTR 1 cut(s) 886
BsaHI GRCGYC 1 cut(s) 1208
BsaJI CCNNGG 4 cut(s) 137, 411, 464, 1305
BsaXI ACNNNNNCTCC 2 cut(s) 875, 905
Bsc4I CCNNNNNNNGG 7 cut(s) 396, 991, 992, 1054, 1204, 1217, 1305
Bse3DI GCAATG 1 cut(s) 291
BseBI CCWGG 6 cut(s) 138, 503, 598, 957, 1218, 1306
BseDI CCNNGG 4 cut(s) 137, 411, 464, 1305
BseLI CCNNNNNNNGG 7 cut(s) 396, 991, 992, 1054, 1204, 1217, 1305
BseMI GCAATG 1 cut(s) 291
BseRI GAGGAG 1 cut(s) 207
BseSI GKGCMC 2 cut(s) 891, 911
BseX3I CGGCCG 1 cut(s) 1056
BseXI GCAGC 4 cut(s) 287, 469, 986, 1090
BseYI CCCAGC 1 cut(s) 677
Bsh1285I CGRYCG 1 cut(s) 1059
BshFI GGCC 6 cut(s) 416, 663, 689, 909, 1058, 1188
BshNI GGYRCC 2 cut(s) 239, 1207
BsiEI CGRYCG 1 cut(s) 1059
BsiHKAI GWGCWC 1 cut(s) 46
BsiSI CCGG 1 cut(s) 1026
BslFI GGGAC 1 cut(s) 601
BslI CCNNNNNNNGG 7 cut(s) 396, 991, 992, 1054, 1204, 1217, 1305
BsmAI GTCTC 3 cut(s) 90, 93, 549
BsmFI GGGAC 1 cut(s) 601
BsmI GAATGC 1 cut(s) 278
BsnI GGCC 6 cut(s) 416, 663, 689, 909, 1058, 1188
Bsp119I TTCGAA 1 cut(s) 72
Bsp120I GGGCCC 1 cut(s) 907
Bsp1286I GDGCHC 3 cut(s) 46, 891, 911
Bsp1407I TGTACA 2 cut(s) 222, 1227
Bsp143I GATC 6 cut(s) 18, 65, 358, 374, 633, 918
Bsp1720I GCTNAGC 1 cut(s) 749
Bsp19I CCATGG 2 cut(s) 411, 464
BspACI CCGC 5 cut(s) 105, 417, 499, 950, 1100
BspANI GGCC 6 cut(s) 416, 663, 689, 909, 1058, 1188
BspHI TCATGA 1 cut(s) 1140
BspLI GGNNCC 7 cut(s) 241, 688, 879, 908, 909, 954, 1209
BspPI GGATC 3 cut(s) 60, 353, 382
BspT104I TTCGAA 1 cut(s) 72
BspT107I GGYRCC 2 cut(s) 239, 1207
BsrDI GCAATG 1 cut(s) 291
BsrGI TGTACA 2 cut(s) 222, 1227
BssECI CCNNGG 4 cut(s) 137, 411, 464, 1305
BssMI GATC 6 cut(s) 18, 65, 358, 374, 633, 918
BssNI GRCGYC 1 cut(s) 1208
BssT1I CCWWGG 2 cut(s) 411, 464
Bst2UI CCWGG 6 cut(s) 138, 503, 598, 957, 1218, 1306
Bst4CI ACNGT 6 cut(s) 28, 48, 148, 302, 448, 1280
Bst6I CTCTTC 1 cut(s) 852
BstACI GRCGYC 1 cut(s) 1208
BstAPI GCANNNNNTGC 1 cut(s) 215
BstAUI TGTACA 2 cut(s) 222, 1227
BstBAI YACGTR 1 cut(s) 886
BstBI TTCGAA 1 cut(s) 72
BstC8I GCNNGC 5 cut(s) 577, 768, 1042, 1186, 1296
BstDEI CTNAG 2 cut(s) 619, 749
BstDSI CCRYGG 2 cut(s) 411, 464
BstH2I RGCGCY 2 cut(s) 582, 1211
BstHHI GCGC 2 cut(s) 581, 1210
BstKTI GATC 6 cut(s) 21, 68, 361, 377, 636, 921
BstMAI GTCTC 3 cut(s) 90, 93, 549
BstMBI GATC 6 cut(s) 18, 65, 358, 374, 633, 918
BstMCI CGRYCG 1 cut(s) 1059
BstMWI GCNNNNNNNGC 2 cut(s) 215, 1181
BstNI CCWGG 6 cut(s) 138, 503, 598, 957, 1218, 1306
BstNSI RCATGY 2 cut(s) 213, 1044
BstSCI CCNGG 7 cut(s) 136, 501, 596, 955, 1025, 1216, 1304
BstSLI GKGCMC 2 cut(s) 891, 911
BstV1I GCAGC 4 cut(s) 287, 469, 986, 1090
BstX2I RGATCY 1 cut(s) 18
BstYI RGATCY 1 cut(s) 18
BstZI CGGCCG 1 cut(s) 1056
BsuI GTATCC 1 cut(s) 1268
BsuRI GGCC 6 cut(s) 416, 663, 689, 909, 1058, 1188
BtgI CCRYGG 2 cut(s) 411, 464
BtsIMutI CAGTG 4 cut(s) 153, 307, 453, 1285
Cac8I GCNNGC 5 cut(s) 577, 768, 1042, 1186, 1296
CaiI CAGNNNCTG 2 cut(s) 137, 1103
CciI TCATGA 1 cut(s) 1140
CfoI GCGC 2 cut(s) 581, 1210
Cfr13I GGNCC 4 cut(s) 662, 687, 907, 908
Csp6I GTAC 4 cut(s) 223, 240, 964, 1228
CviAII CATG 6 cut(s) 110, 210, 412, 465, 1041, 1141
CviQI GTAC 4 cut(s) 223, 240, 964, 1228
DdeI CTNAG 2 cut(s) 619, 749
DinI GGCGCC 1 cut(s) 1209
DpnI GATC 6 cut(s) 20, 67, 360, 376, 635, 920
DpnII GATC 6 cut(s) 18, 65, 358, 374, 633, 918
EaeI YGGCCR 2 cut(s) 414, 1056
EagI CGGCCG 1 cut(s) 1056
Eam1104I CTCTTC 1 cut(s) 852
EarI CTCTTC 1 cut(s) 852
EclXI CGGCCG 1 cut(s) 1056
Eco130I CCWWGG 2 cut(s) 411, 464
Eco24I GRGCYC 1 cut(s) 911
Eco52I CGGCCG 1 cut(s) 1056
EcoO109I RGGNCCY 1 cut(s) 907
EcoRI GAATTC 1 cut(s) 530
EcoRII CCWGG 6 cut(s) 136, 501, 596, 955, 1216, 1304
EcoT14I CCWWGG 2 cut(s) 411, 464
EcoT38I GRGCYC 1 cut(s) 911
EgeI GGCGCC 1 cut(s) 1209
EheI GGCGCC 1 cut(s) 1209
ErhI CCWWGG 2 cut(s) 411, 464
FaeI CATG 6 cut(s) 113, 213, 415, 468, 1044, 1144
FaqI GGGAC 1 cut(s) 601
FatI CATG 6 cut(s) 109, 209, 411, 464, 1040, 1140
FbaI TGATCA 2 cut(s) 633, 918
FblI GTMKAC 2 cut(s) 306, 735
Fnu4HI GCNGC 7 cut(s) 276, 417, 483, 951, 975, 1101, 1104
FriOI GRGCYC 1 cut(s) 911
Fsp4HI GCNGC 7 cut(s) 276, 417, 483, 951, 975, 1101, 1104
FspBI CTAG 5 cut(s) 272, 1008, 1203, 1317, 1321
GlaI GCGC 2 cut(s) 580, 1209
GluI GCNGC 7 cut(s) 276, 417, 483, 951, 975, 1101, 1104
GsaI CCCAGC 1 cut(s) 681
GsuI CTGGAG 2 cut(s) 580, 939
HaeII RGCGCY 2 cut(s) 582, 1211
HaeIII GGCC 6 cut(s) 416, 663, 689, 909, 1058, 1188
HapII CCGG 1 cut(s) 1026
HhaI GCGC 2 cut(s) 581, 1210
Hin1I GRCGYC 1 cut(s) 1208
Hin1II CATG 6 cut(s) 113, 213, 415, 468, 1044, 1144
Hin6I GCGC 2 cut(s) 579, 1208
HinP1I GCGC 2 cut(s) 579, 1208
HincII GTYRAC 3 cut(s) 265, 307, 736
HindII GTYRAC 3 cut(s) 265, 307, 736
HinfI GANTC 2 cut(s) 86, 98
HpaII CCGG 1 cut(s) 1026
HphI GGTGA 1 cut(s) 1076
Hpy166II GTNNAC 7 cut(s) 223, 265, 307, 736, 1228, 1268, 1286
Hpy188I TCNGA 6 cut(s) 41, 329, 638, 720, 782, 918
Hpy188III TCNNGA 4 cut(s) 63, 1141, 1160, 1235
Hpy8I GTNNAC 7 cut(s) 223, 265, 307, 736, 1228, 1268, 1286
Hpy99I CGWCG 2 cut(s) 260, 740
HpyAV CCTTC 4 cut(s) 79, 334, 422, 1209
HpyCH4III ACNGT 6 cut(s) 28, 48, 148, 302, 448, 1280
HpyCH4IV ACGT 3 cut(s) 885, 962, 1071
HpyCH4V TGCA 6 cut(s) 368, 461, 770, 839, 1175, 1294
HpyF10VI GCNNNNNNNGC 2 cut(s) 215, 1181
HpyF3I CTNAG 2 cut(s) 619, 749
HpySE526I ACGT 3 cut(s) 885, 962, 1071
Hsp92I GRCGYC 1 cut(s) 1208
Hsp92II CATG 6 cut(s) 113, 213, 415, 468, 1044, 1144
HspAI GCGC 2 cut(s) 579, 1208
KasI GGCGCC 1 cut(s) 1207
KpnI GGTACC 1 cut(s) 243
Ksp22I TGATCA 2 cut(s) 633, 918
Kzo9I GATC 6 cut(s) 18, 65, 358, 374, 633, 918
LmnI GCTCC 5 cut(s) 41, 437, 883, 958, 1181
Lsp1109I GCAGC 4 cut(s) 287, 469, 986, 1090
LweI GCATC 1 cut(s) 779
MaeI CTAG 5 cut(s) 272, 1008, 1203, 1317, 1321
MaeII ACGT 3 cut(s) 885, 962, 1071
MaeIII GTNAC 1 cut(s) 448
MalI GATC 6 cut(s) 20, 67, 360, 376, 635, 920
MboI GATC 6 cut(s) 18, 65, 358, 374, 633, 918
MboII GAAGA 6 cut(s) 86, 89, 635, 638, 800, 869
MfeI CAATTG 1 cut(s) 369
MflI RGATCY 1 cut(s) 18
MhlI GDGCHC 3 cut(s) 46, 891, 911
MluCI AATT 9 cut(s) 346, 369, 530, 543, 645, 711, 1152, 1169, 1255
Mly113I GGCGCC 1 cut(s) 1208
MlyI GAGTC 2 cut(s) 92, 95
MnlI CCTC 7 cut(s) 185, 188, 632, 667, 897, 901, 985
MseI TTAA 5 cut(s) 345, 542, 821, 864, 1089
MslI CAYNNNNRTG 1 cut(s) 208
MspA1I CMGCKG 2 cut(s) 419, 1100
MspI CCGG 1 cut(s) 1026
MspR9I CCNGG 7 cut(s) 138, 503, 598, 957, 1027, 1218, 1306
MunI CAATTG 1 cut(s) 369
Mva1269I GAATGC 1 cut(s) 278
MvaI CCWGG 6 cut(s) 138, 503, 598, 957, 1218, 1306
MwoI GCNNNNNNNGC 2 cut(s) 215, 1181
NarI GGCGCC 1 cut(s) 1208
NciI CCSGG 1 cut(s) 1027
NcoI CCATGG 2 cut(s) 411, 464
NdeII GATC 6 cut(s) 18, 65, 358, 374, 633, 918
NlaIII CATG 6 cut(s) 113, 213, 415, 468, 1044, 1144
NlaIV GGNNCC 7 cut(s) 241, 688, 879, 908, 909, 954, 1209
NmuCI GTSAC 1 cut(s) 448
NspI RCATGY 2 cut(s) 213, 1044
NspV TTCGAA 1 cut(s) 72
PaeI GCATGC 1 cut(s) 1044
PagI TCATGA 1 cut(s) 1140
PctI GAATGC 1 cut(s) 278
PflFI GACNNNGTC 1 cut(s) 302
PflMI CCANNNNNTGG 1 cut(s) 1217
PfoI TCCNGGA 1 cut(s) 955
PkrI GCNGC 7 cut(s) 277, 418, 484, 952, 976, 1102, 1105
PleI GAGTC 2 cut(s) 92, 94
PluTI GGCGCC 1 cut(s) 1211
PpsI GAGTC 2 cut(s) 92, 94
Ppu21I YACGTR 1 cut(s) 886
PshBI ATTAAT 1 cut(s) 864
Psp6I CCWGG 6 cut(s) 136, 501, 596, 955, 1216, 1304
PspFI CCCAGC 1 cut(s) 677
PspGI CCWGG 6 cut(s) 136, 501, 596, 955, 1216, 1304
PspN4I GGNNCC 7 cut(s) 241, 688, 879, 908, 909, 954, 1209
PspOMI GGGCCC 1 cut(s) 907
PspPI GGNCC 4 cut(s) 662, 687, 907, 908
PstNI CAGNNNCTG 2 cut(s) 137, 1103
PsuI RGATCY 1 cut(s) 18
PsyI GACNNNGTC 1 cut(s) 302
RsaI GTAC 4 cut(s) 224, 241, 965, 1229
RsaNI GTAC 4 cut(s) 223, 240, 964, 1228
RseI CAYNNNNRTG 1 cut(s) 208
SalI GTCGAC 2 cut(s) 305, 734
SaqAI TTAA 5 cut(s) 345, 542, 821, 864, 1089
SatI GCNGC 7 cut(s) 276, 417, 483, 951, 975, 1101, 1104
Sau3AI GATC 6 cut(s) 18, 65, 358, 374, 633, 918
Sau96I GGNCC 4 cut(s) 662, 687, 907, 908
SchI GAGTC 2 cut(s) 92, 95
ScrFI CCNGG 7 cut(s) 138, 503, 598, 957, 1027, 1218, 1306
SduI GDGCHC 3 cut(s) 46, 891, 911
SfaNI GCATC 1 cut(s) 779
SfoI GGCGCC 1 cut(s) 1209
SfuI TTCGAA 1 cut(s) 72
SmiMI CAYNNNNRTG 1 cut(s) 208
SmlI CTYRAG 3 cut(s) 100, 774, 935
SmoI CTYRAG 3 cut(s) 100, 774, 935
SphI GCATGC 1 cut(s) 1044
Sse9I AATT 9 cut(s) 346, 369, 530, 543, 645, 711, 1152, 1169, 1255
SsiI CCGC 5 cut(s) 105, 417, 499, 950, 1100
SspDI GGCGCC 1 cut(s) 1207
SspMI CTAG 5 cut(s) 272, 1008, 1203, 1317, 1321
StyD4I CCNGG 7 cut(s) 136, 501, 596, 955, 1025, 1216, 1304
StyI CCWWGG 2 cut(s) 411, 464
TaaI ACNGT 6 cut(s) 28, 48, 148, 302, 448, 1280
TaiI ACGT 3 cut(s) 888, 965, 1074
TaqI TCGA 6 cut(s) 64, 72, 282, 306, 735, 902
TasI AATT 9 cut(s) 346, 369, 530, 543, 645, 711, 1152, 1169, 1255
TatI WGTACW 2 cut(s) 222, 1227
TauI GCSGC 3 cut(s) 419, 953, 1103
Tru1I TTAA 5 cut(s) 345, 542, 821, 864, 1089
Tru9I TTAA 5 cut(s) 345, 542, 821, 864, 1089
TscAI CASTG 4 cut(s) 153, 307, 453, 1285
TseFI GTSAC 1 cut(s) 448
TseI GCWGC 4 cut(s) 275, 482, 974, 1103
Tsp45I GTSAC 1 cut(s) 448
TspDTI ATGAA 3 cut(s) 441, 756, 1254
TspGWI ACGGA 1 cut(s) 1194
TspRI CASTG 4 cut(s) 153, 307, 453, 1285
Tth111I GACNNNGTC 1 cut(s) 302
Van91I CCANNNNNTGG 1 cut(s) 1217
VspI ATTAAT 1 cut(s) 864
XapI RAATTY 3 cut(s) 530, 1169, 1255
XceI RCATGY 2 cut(s) 213, 1044
XmiI GTMKAC 2 cut(s) 306, 735
XspI CTAG 5 cut(s) 272, 1008, 1203, 1317, 1321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.