Rorug01G0173100

cucumisin-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
23605705 .. 23610166
4462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0173100.1

Sequence Viewer

Length: 2109 bp
ATGCAGCAACCTCAGGAGTCGACGACGGCAGCCGATGAGATTCGCTCCTTACGGGTCGACGGCTTGAGTCCGAGGATGGGTGAGATGTATCTCTACAACTGCTTCAGTGACTGCGCAGAGGTTTTGGCTGCAACAGTTTTGCGGAAAGTGCAAACCGGATGGCAGGAAGATCATGGTTTTGTCGAGTTTGCTTCTCACAGTGTGGCTGAGTTTGTCTTGAGCTCCTACAATGGTGAGCTCATGCCCAACTACAATAATCGGAGATTTTGCCTGAGCTGGGACACTGATGGTTACGGTACAAGGTGGCGCTGGGATCCTGTTTACCAGCAATGGTCTTTCTTTGGTTATGATGAGCACTGTGATATGTTGGATGCCAAGACAGTGATCGAGTTGTACAAGGACTGCATACCTGTTGTTACTGAAAAGCCATCTGGTAGTGCTCAGCAATATTCGCAAGCTGCCTACCCAAATACTCTTGGAGATTCAGGCGAGGCTATTCCAAATAACACAGAAAACCAGCTAGTTCAGACAAAGTGGAATGGTTATAGTCGTGCTGGCTCTATGGATAGTTACAAGCGTTTGAAGCATGCACATGTGGATCTATGGAATGGTGGTAATGGTGCTGGGTTTATGTTTATGCAGAACAACTTGATGCGTCCACATCACCTTAACCTGTATCATGGAGGACAGGCTGGATATGTAAATTACCAGCAGCATGGTCTATACCCACAGCCTTGTGCTTATCAGCTGCCTTATCAACAACATCAGACACAGTGGACTGTTGGCAGTGATGTGCGTCCACTTGGGCAGCTCACCCAAGTTCCTAACCTGCAGGCGGGATATGTAAATTACCAGCAGCATGGTCTCTACCCACAGGAGAAGAAGCTGTATTTATGTTTCGATGAGCACAATGCCCCGATCAATTGTTGTTATGTTCTCCGCACCATAAATTTGTCCGAGTTACTTGCATGCTCCTGTGAGTTCAGCAGCGATACTGAAGAAATAACCAAGTGCAGCTATTGCACCTCCAAAGTCAAACCGGAATCTCGGTTGCGCCAGCGGGCTTGGCTCTTCGCCAGCGAGGAAAATCCTTTCAGCTGCGGTAGGGTGGAGGTGATAATTCCTGCGCGTATGGGTTGCTGTGCCTCCGGCTCCCAAATCTTCTTCTCTGGTGGCATAGCTCCACTACCACTTAGGGAAAGACGATTTATGGAAAGACTATTTCTGCCAAGTGGAGATGTCTATAGTTTTGAACCCAAGTCTATGTTTTGGAAAAAGCATGATTGGAGTTTCCTGAAGGGGAAACCAGACCCCTTGCTTTTTGAGGTGAACGGAAATCTCTATTGTCTCACAGGTAGGCCCCTAGGTTTTTCTCTTGATCGTCCCACTTTCGAGGTATACTATAGCAGTTCTGGTGAATGTGAGGCTTTGCCGGATCCTCCATTTTACCTACCGGAACTAGATCACAACAAAAACTACAGCGGCCGTTTGCCTGGTAGTGAATTGTCTTATGCTATTGTTGGTACCAAGATCTTGATCTCGAGCAGGCACAACAATGAATCAATCCCTAACTTTCCCATTATGTGTTTTGATGTGAATGAGAAGGAAAAGAAATGGAGAGAGATGACTTCCTTGTTCGATGGTAAGCCCTTTCCCTTCATCAGCAGGGCGGCTTTGGTCTTGGACTTGAACGATGGTACACATGATAAGGTCATGTTTTCCGTTCGTGAATATCACGAGATGTATGTCTCCCGATTAGTTGTGAATGATGATGGTAGTATATACAACTCTCAGGATTCTCCTCTGTTGTTTTTTAACTGGTTCTATACCTTCTTTGGTGACCTTTGTCCTTTACATTCAAAGTCATACAGCTTTGTCGATCTAGGAAATCAAAAAGTTGGCTTTGTTGTGTGCGGGAACATGGGTACAATGGCAAGAGGTGATACACCTTCTCTCCGGAAGGTGCGTGTTCTTGTGTTAGTAATTGAATATGAAGTGACAAAATCAAGATATGTACGGGGAAAGCTCCTGGCCACTCGCACCTTTGAATACAAATGCCATTCCGCCGGCCTCCGATCCGTCGACTTGATTGGTAGCTTTGTGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

702

Amino Acids

80.2

Weight (kDa)

6.12

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 17 - 83 1.1e-07 RNA recognition motif
DUF1668 PF07893 435 - 563 6.2e-06 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000390)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18050 FvH4_7g18050
malus_domestica MD07G1206200.v1.1 MD07G1206400.v1.1 MD07G1206500.v1.1 MD07G1206700.v1.1 MD07G1207000.v1.1 MD07G1207100.v1.1 MD07G1207200.v1.1
prunus_persica Prupe.2G166200_v2.0.a1 Prupe.2G242000_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242100_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242200_v2.0.a1 Prupe.2G242400_v2.0.a1
pyrus_communis pycom07g19260 pycom07g19280 pycom07g19290
rosa_chinensis RchiOBHm_Chr1g0325901 RchiOBHm_Chr1g0325961 RchiOBHm_Chr1g0344281 RchiOBHm_Chr1g0344291 RchiOBHm_Chr1g0344301 RchiOBHm_Chr1g0368771 RchiOBHm_Chr1g0369141 RchiOBHm_Chr1g0369281 RchiOBHm_Chr1g0369291 RchiOBHm_Chr1g0369661 RchiOBHm_Chr1g0370161 RchiOBHm_Chr4g0396401
rosa_laevigata RLG00000009546 RLG00000027070 RLG00000027140 RLG00000027151 RLG00000027152 RLG00000027190 RLG00000027255 RLG00000028909 RLG00000030094 RLG00000030097
rosa_multiflora Rmu_co8196240.1_g000001 Rmu_co8379125.1_g000001 Rmu_co8402573.1_g000001 Rmu_co8479243.1_g000001 Rmu_sc0000019.1_g000019 Rmu_sc0001154.1_g000009 Rmu_sc0001482.1_g000014 Rmu_sc0004250.1_g000009 Rmu_sc0006696.1_g000002 Rmu_sc0006696.1_g000004 Rmu_sc0008679.1_g000018 Rmu_sc0009743.1_g000003 Rmu_sc0013657.1_g000023
rosa_roxburghii Rroxscaffold_4G00286760 Rroxscaffold_4G00287250 Rroxscaffold_4G00287470 Rroxscaffold_4G00287770 Rroxscaffold_4G00287930 Rroxscaffold_4G00309920 Rroxscaffold_4G00324120
rosa_rugosa Rorug01G0055900 Rorug01G0173100 Rorug01G0173200 Rorug01G0337700 Rorug01G0337800 Rorug01G0337800 Rorug01G0337800 Rorug01G0344900 Rorug01G0349400 Rorug01G0349400 Rorug01G0351700 Rorug01G0354500
rosa_samantha Rh1AG072300 Rh1AG189000 Rh1AG189100 Rh1AG351900 Rh1AG356500 Rh1AG359800 Rh1AG363200 Rh1BG059100 Rh1BG155800 Rh1BG306800 Rh1BG315600 Rh1BG319000 Rh1BG320300 Rh1BG326300 Rh1BG326400 Rh1CG071600 Rh1CG174600 Rh1CG174800 Rh1CG322400 Rh1CG330300 Rh1CG334200 Rh1CG339600
rosa_wichuraiana Rw1G005870 Rw1G005900 Rw1G015560 Rw1G031350 Rw1G031470 Rw1G031700 Rw1G031960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 115
Acc36I ACCTGC 1 cut(s) 837
Acc65I GGTACC 1 cut(s) 1523
AccB1I GGYRCC 1 cut(s) 1523
AccI GTMKAC 4 cut(s) 20, 57, 1398, 2082
AccII CGCG 1 cut(s) 1129
AccIII TCCGGA 1 cut(s) 1956
AciI CCGC 9 cut(s) 142, 836, 940, 1060, 1101, 1482, 1670, 1914, 2064
AclWI GGATC 6 cut(s) 308, 321, 606, 1430, 1443, 2070
AcoI YGGCCR 2 cut(s) 1483, 2031
AcsI RAATTY 1 cut(s) 949
AcuI CTGAAG 3 cut(s) 88, 1017, 1316
AdeI CACNNNGTG 1 cut(s) 202
AfaI GTAC 6 cut(s) 298, 395, 1525, 1699, 1927, 2016
AfiI CCNNNNNNNGG 3 cut(s) 77, 277, 835
AflIII ACRYGT 1 cut(s) 592
AgsI TTSAA 6 cut(s) 583, 1253, 1690, 1860, 1988, 2048
AjnI CCWGG 2 cut(s) 1492, 2028
Alw21I GWGCWC 5 cut(s) 224, 240, 357, 442, 909
Alw26I GTCTC 3 cut(s) 869, 1352, 1753
AlwI GGATC 6 cut(s) 308, 321, 606, 1430, 1443, 2070
AlwNI CAGNNNCTG 1 cut(s) 111
Ama87I CYCGRG 1 cut(s) 1540
Aor13HI TCCGGA 1 cut(s) 1956
AoxI GGCC 4 cut(s) 1358, 1483, 2031, 2068
ApoI RAATTY 1 cut(s) 949
Asp718I GGTACC 1 cut(s) 1523
AspA2I CCTAGG 1 cut(s) 1363
AspLEI GCGC 4 cut(s) 116, 309, 1056, 1129
AspS9I GGNCC 1 cut(s) 1359
AsuHPI GGTGA 9 cut(s) 92, 245, 656, 805, 1126, 1339, 1427, 1850, 1952
AvaI CYCGRG 1 cut(s) 1540
AvrII CCTAGG 1 cut(s) 1363
AxyI CCTNAGG 1 cut(s) 12
BalI TGGCCA 1 cut(s) 2033
BamHI GGATCC 2 cut(s) 313, 1435
BanI GGYRCC 1 cut(s) 1523
BanII GRGCYC 2 cut(s) 224, 240
BauI CACGAG 1 cut(s) 1736
Bbv12I GWGCWC 5 cut(s) 224, 240, 357, 442, 909
BccI CCATC 7 cut(s) 70, 153, 281, 436, 1634, 1688, 1766
BceAI ACGGC 3 cut(s) 42, 76, 1470
BcgI CGANNNNNNTGC 2 cut(s) 947, 981
BciT130I CCWGG 2 cut(s) 1494, 2030
BcoDI GTCTC 3 cut(s) 869, 1352, 1753
BfaI CTAG 4 cut(s) 521, 1364, 1460, 1883
BfmI CTRYAG 4 cut(s) 830, 1243, 1402, 1477
BfoI RGCGCY 1 cut(s) 310
BfuAI ACCTGC 1 cut(s) 837
BglII AGATCT 1 cut(s) 1530
BlnI CCTAGG 1 cut(s) 1363
BlpI GCTNAGC 1 cut(s) 441
Bme1390I CCNGG 2 cut(s) 1494, 2030
BmeT110I CYCGRG 1 cut(s) 1540
BmgT120I GGNCC 1 cut(s) 1359
BmiI GGNNCC 5 cut(s) 315, 1153, 1361, 1437, 1525
BmrFI CCNGG 2 cut(s) 1494, 2030
BmsI GCATC 2 cut(s) 361, 642
BoxI GACNNNNGTC 1 cut(s) 1845
BplI GAGNNNNNCTC 2 cut(s) 29, 61
Bpu10I CCTNAGC 1 cut(s) 272
Bpu1102I GCTNAGC 1 cut(s) 441
BpuEI CTTGAG 2 cut(s) 85, 238
BsaBI GATNNNNATC 1 cut(s) 1535
BsaI GGTCTC 1 cut(s) 869
BsaJI CCNNGG 2 cut(s) 71, 1363
BsaWI WCCGGW 4 cut(s) 155, 1039, 1453, 1956
BsaXI ACNNNNNCTCC 2 cut(s) 1938, 1968
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 277, 835
Bse118I RCCGGY 1 cut(s) 2066
Bse1I ACTGG 1 cut(s) 1823
Bse21I CCTNAGG 1 cut(s) 12
Bse3DI GCAATG 1 cut(s) 335
Bse8I GATNNNNATC 1 cut(s) 1535
BseAI TCCGGA 1 cut(s) 1956
BseBI CCWGG 2 cut(s) 1494, 2030
BseDI CCNNGG 2 cut(s) 71, 1363
BseGI GGATG 3 cut(s) 81, 164, 376
BseJI GATNNNNATC 1 cut(s) 1535
BseLI CCNNNNNNNGG 3 cut(s) 77, 277, 835
BseMI GCAATG 1 cut(s) 335
BseMII CTCAG 5 cut(s) 26, 198, 263, 455, 1805
BseNI ACTGG 1 cut(s) 1823
BseRI GAGGAG 1 cut(s) 1791
BseX3I CGGCCG 1 cut(s) 1483
BseYI CCCAGC 3 cut(s) 276, 309, 623
BsgI GTGCAG 1 cut(s) 1033
Bsh1236I CGCG 1 cut(s) 1129
Bsh1285I CGRYCG 1 cut(s) 1486
BshFI GGCC 4 cut(s) 1360, 1485, 2033, 2070
BshNI GGYRCC 1 cut(s) 1523
BsiEI CGRYCG 1 cut(s) 1486
BsiHKAI GWGCWC 5 cut(s) 224, 240, 357, 442, 909
BsiHKCI CYCGRG 1 cut(s) 1540
BsiSI CCGG 7 cut(s) 156, 1040, 1149, 1433, 1454, 1957, 2067
BslFI GGGAC 2 cut(s) 293, 1368
BslI CCNNNNNNNGG 3 cut(s) 77, 277, 835
BsmAI GTCTC 3 cut(s) 869, 1352, 1753
BsmFI GGGAC 2 cut(s) 293, 1368
BsnI GGCC 4 cut(s) 1360, 1485, 2033, 2070
Bso31I GGTCTC 1 cut(s) 869
BsoBI CYCGRG 1 cut(s) 1540
Bsp1286I GDGCHC 5 cut(s) 224, 240, 357, 442, 909
Bsp13I TCCGGA 1 cut(s) 1956
Bsp1407I TGTACA 1 cut(s) 393
Bsp1720I GCTNAGC 1 cut(s) 441
BspACI CCGC 9 cut(s) 142, 836, 940, 1060, 1101, 1482, 1670, 1914, 2064
BspANI GGCC 4 cut(s) 1360, 1485, 2033, 2070
BspCNI CTCAG 5 cut(s) 25, 199, 264, 454, 1804
BspEI TCCGGA 1 cut(s) 1956
BspFNI CGCG 1 cut(s) 1129
BspLI GGNNCC 5 cut(s) 315, 1153, 1361, 1437, 1525
BspMAI CTGCAG 1 cut(s) 834
BspMI ACCTGC 1 cut(s) 837
BspPI GGATC 6 cut(s) 308, 321, 606, 1430, 1443, 2070
BspQI GCTCTTC 1 cut(s) 1076
BspT107I GGYRCC 1 cut(s) 1523
BspTNI GGTCTC 1 cut(s) 869
BsrDI GCAATG 1 cut(s) 335
BsrFI RCCGGY 1 cut(s) 2066
BsrGI TGTACA 1 cut(s) 393
BsrI ACTGG 1 cut(s) 1823
BssAI RCCGGY 1 cut(s) 2066
BssECI CCNNGG 2 cut(s) 71, 1363
BssNAI GTATAC 1 cut(s) 1399
BssSI CACGAG 1 cut(s) 1736
BssT1I CCWWGG 1 cut(s) 1363
Bst1107I GTATAC 1 cut(s) 1399
Bst2BI CACGAG 1 cut(s) 1736
Bst2UI CCWGG 2 cut(s) 1494, 2030
Bst4CI ACNGT 7 cut(s) 136, 200, 296, 359, 382, 774, 781
Bst6I CTCTTC 1 cut(s) 1076
BstAPI GCANNNNNTGC 1 cut(s) 1020
BstAUI TGTACA 1 cut(s) 393
BstDEI CTNAG 6 cut(s) 12, 207, 272, 441, 1193, 1791
BstEII GGTNACC 1 cut(s) 1838
BstF5I GGATG 3 cut(s) 81, 164, 376
BstFNI CGCG 1 cut(s) 1129
BstH2I RGCGCY 1 cut(s) 310
BstHHI GCGC 4 cut(s) 116, 309, 1056, 1129
BstMAI GTCTC 3 cut(s) 869, 1352, 1753
BstMCI CGRYCG 1 cut(s) 1486
BstMWI GCNNNNNNNGC 5 cut(s) 148, 451, 583, 1020, 1066
BstNI CCWGG 2 cut(s) 1494, 2030
BstNSI RCATGY 3 cut(s) 590, 596, 972
BstPAI GACNNNNGTC 1 cut(s) 1845
BstPI GGTNACC 1 cut(s) 1838
BstSCI CCNGG 2 cut(s) 1492, 2028
BstSFI CTRYAG 4 cut(s) 830, 1243, 1402, 1477
BstUI CGCG 1 cut(s) 1129
BstX2I RGATCY 4 cut(s) 313, 598, 1435, 1530
BstXI CCANNNNNNTGG 2 cut(s) 716, 860
BstYI RGATCY 4 cut(s) 313, 598, 1435, 1530
BstZ17I GTATAC 1 cut(s) 1399
BstZI CGGCCG 1 cut(s) 1483
Bsu36I CCTNAGG 1 cut(s) 12
BsuRI GGCC 4 cut(s) 1360, 1485, 2033, 2070
BtsCI GGATG 3 cut(s) 81, 164, 376
BtsI GCAGTG 1 cut(s) 793
BtsIMutI CAGTG 7 cut(s) 112, 205, 282, 355, 387, 779, 793
BveI ACCTGC 1 cut(s) 837
CaiI CAGNNNCTG 1 cut(s) 111
CfoI GCGC 4 cut(s) 116, 309, 1056, 1129
Cfr10I RCCGGY 1 cut(s) 2066
Cfr13I GGNCC 1 cut(s) 1359
CseI GACGC 2 cut(s) 644, 785
Csp6I GTAC 6 cut(s) 297, 394, 1524, 1698, 1926, 2015
CviQI GTAC 6 cut(s) 297, 394, 1524, 1698, 1926, 2015
DdeI CTNAG 6 cut(s) 12, 207, 272, 441, 1193, 1791
DraIII CACNNNGTG 1 cut(s) 202
EaeI YGGCCR 2 cut(s) 1483, 2031
EagI CGGCCG 1 cut(s) 1483
Eam1104I CTCTTC 1 cut(s) 1076
EarI CTCTTC 1 cut(s) 1076
EciI GGCGGA 1 cut(s) 2053
Ecl136II GAGCTC 2 cut(s) 222, 238
EclXI CGGCCG 1 cut(s) 1483
Eco130I CCWWGG 1 cut(s) 1363
Eco24I GRGCYC 2 cut(s) 224, 240
Eco31I GGTCTC 1 cut(s) 869
Eco52I CGGCCG 1 cut(s) 1483
Eco53kI GAGCTC 2 cut(s) 222, 238
Eco57I CTGAAG 3 cut(s) 88, 1017, 1316
Eco81I CCTNAGG 1 cut(s) 12
Eco88I CYCGRG 1 cut(s) 1540
Eco91I GGTNACC 1 cut(s) 1838
EcoICRI GAGCTC 2 cut(s) 222, 238
EcoO109I RGGNCCY 1 cut(s) 1359
EcoO65I GGTNACC 1 cut(s) 1838
EcoRII CCWGG 2 cut(s) 1492, 2028
EcoT14I CCWWGG 1 cut(s) 1363
EcoT38I GRGCYC 2 cut(s) 224, 240
ErhI CCWWGG 1 cut(s) 1363
FaqI GGGAC 2 cut(s) 293, 1368
FauI CCCGC 3 cut(s) 829, 1053, 1907
FblI GTMKAC 4 cut(s) 20, 57, 1398, 2082
FokI GGATG 3 cut(s) 88, 171, 383
FriOI GRGCYC 2 cut(s) 224, 240
FspBI CTAG 4 cut(s) 521, 1364, 1460, 1883
FspI TGCGCA 1 cut(s) 115
GlaI GCGC 4 cut(s) 115, 308, 1055, 1128
GsaI CCCAGC 3 cut(s) 280, 313, 627
HaeII RGCGCY 1 cut(s) 310
HaeIII GGCC 4 cut(s) 1360, 1485, 2033, 2070
HapII CCGG 7 cut(s) 156, 1040, 1149, 1433, 1454, 1957, 2067
HgaI GACGC 2 cut(s) 644, 785
HhaI GCGC 4 cut(s) 116, 309, 1056, 1129
Hin6I GCGC 4 cut(s) 114, 307, 1054, 1127
HinP1I GCGC 4 cut(s) 114, 307, 1054, 1127
HincII GTYRAC 3 cut(s) 21, 58, 2083
HindII GTYRAC 3 cut(s) 21, 58, 2083
HinfI GANTC 7 cut(s) 17, 40, 67, 482, 1043, 1559, 1796
HpaII CCGG 7 cut(s) 156, 1040, 1149, 1433, 1454, 1957, 2067
HphI GGTGA 9 cut(s) 92, 245, 656, 805, 1126, 1339, 1427, 1850, 1952
Hpy188I TCNGA 6 cut(s) 72, 261, 528, 768, 958, 2075
Hpy99I CGWCG 4 cut(s) 25, 28, 62, 2084
HpyAV CCTTC 6 cut(s) 1291, 1597, 1666, 1840, 1954, 1959
HpyCH4III ACNGT 7 cut(s) 136, 200, 296, 359, 382, 774, 781
HpyF10VI GCNNNNNNNGC 5 cut(s) 148, 451, 583, 1020, 1066
HpyF3I CTNAG 6 cut(s) 12, 207, 272, 441, 1193, 1791
HspAI GCGC 4 cut(s) 114, 307, 1054, 1127
Kpn2I TCCGGA 1 cut(s) 1956
KpnI GGTACC 1 cut(s) 1527
KroI GCCGGC 1 cut(s) 2066
KroNI GCCGGC 1 cut(s) 2068
LguI GCTCTTC 1 cut(s) 1076
LmnI GCTCC 6 cut(s) 50, 227, 977, 1157, 1186, 2031
LweI GCATC 2 cut(s) 361, 642
MaeI CTAG 4 cut(s) 521, 1364, 1460, 1883
MaeIII GTNAC 7 cut(s) 107, 290, 415, 569, 960, 1838, 1996
MboII GAAGA 6 cut(s) 179, 892, 1010, 1063, 1153, 1156
MfeI CAATTG 1 cut(s) 922
MflI RGATCY 4 cut(s) 313, 598, 1435, 1530
MhlI GDGCHC 5 cut(s) 224, 240, 357, 442, 909
MlsI TGGCCA 1 cut(s) 2033
MluCI AATT 7 cut(s) 703, 847, 922, 949, 1119, 1502, 1983
MluNI TGGCCA 1 cut(s) 2033
MlyI GAGTC 2 cut(s) 26, 76
MmeI TCCRAC 1 cut(s) 348
Mox20I TGGCCA 1 cut(s) 2033
MroI TCCGGA 1 cut(s) 1956
MroNI GCCGGC 1 cut(s) 2066
MscI TGGCCA 1 cut(s) 2033
MseI TTAA 2 cut(s) 669, 1815
MslI CAYNNNNRTG 2 cut(s) 591, 1554
Msp20I TGGCCA 1 cut(s) 2033
MspA1I CMGCKG 4 cut(s) 748, 1060, 1098, 1482
MspI CCGG 7 cut(s) 156, 1040, 1149, 1433, 1454, 1957, 2067
MspR9I CCNGG 2 cut(s) 1494, 2030
MunI CAATTG 1 cut(s) 922
MvaI CCWGG 2 cut(s) 1494, 2030
MvnI CGCG 1 cut(s) 1129
MwoI GCNNNNNNNGC 5 cut(s) 148, 451, 583, 1020, 1066
NaeI GCCGGC 1 cut(s) 2068
NgoMIV GCCGGC 1 cut(s) 2066
NlaIV GGNNCC 5 cut(s) 315, 1153, 1361, 1437, 1525
NmuCI GTSAC 3 cut(s) 107, 1838, 1996
NsbI TGCGCA 1 cut(s) 115
NspI RCATGY 3 cut(s) 590, 596, 972
PaeI GCATGC 2 cut(s) 590, 972
PaeR7I CTCGAG 1 cut(s) 1540
PciI ACATGT 1 cut(s) 592
PciSI GCTCTTC 1 cut(s) 1076
PdiI GCCGGC 1 cut(s) 2068
PfeI GAWTC 5 cut(s) 40, 482, 1043, 1559, 1796
PleI GAGTC 2 cut(s) 25, 75
PpsI GAGTC 2 cut(s) 25, 75
PscI ACATGT 1 cut(s) 592
PshAI GACNNNNGTC 1 cut(s) 1845
Psp124BI GAGCTC 2 cut(s) 224, 240
Psp6I CCWGG 2 cut(s) 1492, 2028
PspEI GGTNACC 1 cut(s) 1838
PspFI CCCAGC 3 cut(s) 276, 309, 623
PspGI CCWGG 2 cut(s) 1492, 2028
PspN4I GGNNCC 5 cut(s) 315, 1153, 1361, 1437, 1525
PspPI GGNCC 1 cut(s) 1359
PstI CTGCAG 1 cut(s) 834
PstNI CAGNNNCTG 1 cut(s) 111
PsuI RGATCY 4 cut(s) 313, 598, 1435, 1530
PvuII CAGCTG 2 cut(s) 748, 1098
RsaI GTAC 6 cut(s) 298, 395, 1525, 1699, 1927, 2016
RsaNI GTAC 6 cut(s) 297, 394, 1524, 1698, 1926, 2015
RseI CAYNNNNRTG 2 cut(s) 591, 1554
SacI GAGCTC 2 cut(s) 224, 240
SalI GTCGAC 3 cut(s) 19, 56, 2081
SapI GCTCTTC 1 cut(s) 1076
SaqAI TTAA 2 cut(s) 669, 1815
Sau96I GGNCC 1 cut(s) 1359
SbfI CCTGCAGG 1 cut(s) 834
SchI GAGTC 2 cut(s) 26, 76
ScrFI CCNGG 2 cut(s) 1494, 2030
SdaI CCTGCAGG 1 cut(s) 834
SduI GDGCHC 5 cut(s) 224, 240, 357, 442, 909
SfaNI GCATC 2 cut(s) 361, 642
SfcI CTRYAG 4 cut(s) 830, 1243, 1402, 1477
Sfr274I CTCGAG 1 cut(s) 1540
SlaI CTCGAG 1 cut(s) 1540
SmiMI CAYNNNNRTG 2 cut(s) 591, 1554
SmlI CTYRAG 3 cut(s) 64, 217, 1540
SmoI CTYRAG 3 cut(s) 64, 217, 1540
SphI GCATGC 2 cut(s) 590, 972
Sse8387I CCTGCAGG 1 cut(s) 834
Sse9I AATT 7 cut(s) 703, 847, 922, 949, 1119, 1502, 1983
SsiI CCGC 9 cut(s) 142, 836, 940, 1060, 1101, 1482, 1670, 1914, 2064
SspI AATATT 1 cut(s) 449
SspMI CTAG 4 cut(s) 521, 1364, 1460, 1883
SstI GAGCTC 2 cut(s) 224, 240
StyD4I CCNGG 2 cut(s) 1492, 2028
StyI CCWWGG 1 cut(s) 1363
TaaI ACNGT 7 cut(s) 136, 200, 296, 359, 382, 774, 781
TasI AATT 7 cut(s) 703, 847, 922, 949, 1119, 1502, 1983
TatI WGTACW 1 cut(s) 393
TauI GCSGC 2 cut(s) 1485, 1673
TfiI GAWTC 5 cut(s) 40, 482, 1043, 1559, 1796
Tru1I TTAA 2 cut(s) 669, 1815
Tru9I TTAA 2 cut(s) 669, 1815
TscAI CASTG 7 cut(s) 112, 205, 289, 362, 387, 779, 793
TseFI GTSAC 3 cut(s) 107, 1838, 1996
Tsp45I GTSAC 3 cut(s) 107, 1838, 1996
TspDTI ATGAA 3 cut(s) 1572, 1648, 2007
TspGWI ACGGA 3 cut(s) 1347, 1711, 2068
TspRI CASTG 7 cut(s) 112, 205, 289, 362, 387, 779, 793
XapI RAATTY 1 cut(s) 949
XceI RCATGY 3 cut(s) 590, 596, 972
XhoI CTCGAG 1 cut(s) 1540
XmaJI CCTAGG 1 cut(s) 1363
XmiI GTMKAC 4 cut(s) 20, 57, 1398, 2082
XspI CTAG 4 cut(s) 521, 1364, 1460, 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.